View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13186_low_20 (Length: 222)
Name: NF13186_low_20
Description: NF13186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13186_low_20 |
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Alignment Details
Target: chr5 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 15 - 206
Target Start/End: Original strand, 8378785 - 8378976
Alignment:
| Q |
15 |
attattctcttattatctctatttatatcacatcaccaatttattccatctatctttttctctccgccacatggtgcatacaatgtcatagtgtatacaa |
114 |
Q |
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| T |
8378785 |
attattctcttattatctctatttatatcacatcaccaatttatcccatctatccttttctcttcgccacatggtgcatacaatgtcatagtgtatagaa |
8378884 |
T |
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| Q |
115 |
cccgggggtgtaagaaaaaacattttcctttccaaaatgatggttctattgtattagtgaggtttcggtcactaacgaggggagaacacaat |
206 |
Q |
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| T |
8378885 |
cccgggggtgtaagaaaaaacattttcctttccaaaatgatggttctattgtattagtgaggtttcggtcactaacgaggggagaacacaat |
8378976 |
T |
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