View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13187_low_29 (Length: 248)
Name: NF13187_low_29
Description: NF13187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13187_low_29 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 25614497 - 25614264
Alignment:
| Q |
1 |
agcaaatgataaaatcaaagatggaaggaccacttgtggcagaaataattaagaatcattgacactgccacactactcaaaatggtcatataggttgcat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25614497 |
agcaaatgataaaatcaaagatggaaggaccacttgtggcagaaataattaagaatcattgacactgccacactactcaaaatggtcatataggttgcat |
25614398 |
T |
|
| Q |
101 |
gaaagctatgcacaaaaatagaaattattggttacgtgatcctgctacttgtagtaatatttcaagtttcaacgttaattcaaaccaataattcatgtat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25614397 |
gaaagctatgcacaaaaatagaaattattggttacgtgatcctgctacttgtagtaatatttcaagtttcaacgttaattcaaaccaataattcatgtat |
25614298 |
T |
|
| Q |
201 |
acacgttaaaacaactttgtcactttccttaggt |
234 |
Q |
| |
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|||||||||||||||||||||||||||||||||| |
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| T |
25614297 |
acacgttaaaacaactttgtcactttccttaggt |
25614264 |
T |
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