View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13187_low_33 (Length: 232)
Name: NF13187_low_33
Description: NF13187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13187_low_33 |
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Alignment Details
Target: chr6 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 28846841 - 28847044
Alignment:
| Q |
18 |
cttactcctacacaagatatgactcattcaaatcaaaattcaatttattttgttcagtagcggcatcattacttttctcttcatcattgttgtcactctc |
117 |
Q |
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| T |
28846841 |
cttactcctccacaagatatgaatcattcaaatcaaaattcaatttattttgttcagtagcggcatcattacttttctcttcatcattgttgtcactctc |
28846940 |
T |
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| Q |
118 |
atcaccattaccatcacatttgttttcaatctttaatgaaccacccaaaaccaaactattcttgttcacaataagttccttctttccattcccatttgat |
217 |
Q |
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||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28846941 |
atcaccattaccatcacatttgttttcaatcttcaatgaacaacccaaaacgaaactattcttgttcacaataagttccttctttccattcccatttgat |
28847040 |
T |
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| Q |
218 |
gatg |
221 |
Q |
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|||| |
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| T |
28847041 |
gatg |
28847044 |
T |
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