View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1318_high_112 (Length: 262)
Name: NF1318_high_112
Description: NF1318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1318_high_112 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 30 - 262
Target Start/End: Complemental strand, 6985830 - 6985598
Alignment:
| Q |
30 |
gaagcatgtattttatttaatcaaaatggtttagggtgtaatttgtgagtcccaattaacccttcctgcctaaatggggactgtactttttcatcttatt |
129 |
Q |
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| T |
6985830 |
gaagcatgtattttatttaatcaaaatggtttagggtgtaatttgtgagtcccaattaacctttcctgcctaaatggggactgtactttttcatcttatt |
6985731 |
T |
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| Q |
130 |
caaagagctgacgtgattaaaatgaattggacataccttctttagcaagcaattgtatttaagaaatcctgaaatcttttaattctgtcaagtggtttgt |
229 |
Q |
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| T |
6985730 |
caaagagctgacgtgattaaaatgaattggacataccttctttagcaagcaattgtatttaagaaatcctgaaatcttttaattctgtcaagtggtttgt |
6985631 |
T |
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| Q |
230 |
atttaattttcacaattatttaccttttttagt |
262 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
6985630 |
atttaattttcacaattatttaccttttttagt |
6985598 |
T |
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