View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1318_high_141 (Length: 244)

Name: NF1318_high_141
Description: NF1318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1318_high_141
NF1318_high_141
[»] scaffold0044 (3 HSPs)
scaffold0044 (85-238)||(30782-30935)
scaffold0044 (85-238)||(72596-72749)
scaffold0044 (85-205)||(8347-8467)
[»] chr8 (27 HSPs)
chr8 (85-238)||(17669268-17669421)
chr8 (85-238)||(17675920-17676073)
chr8 (85-238)||(5534137-5534290)
chr8 (85-238)||(21915268-21915421)
chr8 (85-234)||(20019638-20019787)
chr8 (85-238)||(22084086-22084239)
chr8 (85-225)||(20013562-20013702)
chr8 (85-238)||(28455014-28455167)
chr8 (85-238)||(22123083-22123236)
chr8 (85-238)||(8354461-8354614)
chr8 (89-205)||(19111514-19111630)
chr8 (89-205)||(19117805-19117921)
chr8 (85-238)||(18865586-18865739)
chr8 (85-196)||(22115418-22115529)
chr8 (85-238)||(18855191-18855344)
chr8 (85-205)||(29123373-29123493)
chr8 (85-238)||(16882870-16883023)
chr8 (125-238)||(19496645-19496758)
chr8 (85-238)||(22048201-22048354)
chr8 (88-196)||(19905793-19905901)
chr8 (85-160)||(22122120-22122195)
chr8 (85-196)||(20023626-20023737)
chr8 (85-196)||(20527746-20527857)
chr8 (85-196)||(26934874-26934985)
chr8 (125-196)||(18065628-18065699)
chr8 (85-196)||(3216558-3216669)
chr8 (155-196)||(22124296-22124337)
[»] chr7 (55 HSPs)
chr7 (85-238)||(40523059-40523212)
chr7 (85-238)||(9510710-9510863)
chr7 (85-238)||(18164371-18164524)
chr7 (85-234)||(14337629-14337778)
chr7 (85-234)||(14331045-14331194)
chr7 (85-238)||(60374-60527)
chr7 (87-238)||(21937-22088)
chr7 (87-238)||(8201774-8201925)
chr7 (85-238)||(15022384-15022538)
chr7 (85-238)||(15155867-15156020)
chr7 (85-238)||(16406992-16407145)
chr7 (85-238)||(11366455-11366608)
chr7 (85-238)||(13684717-13684870)
chr7 (85-238)||(13691332-13691485)
chr7 (85-238)||(15162518-15162671)
chr7 (85-238)||(14655114-14655267)
chr7 (85-238)||(18176359-18176512)
chr7 (85-238)||(18183031-18183184)
chr7 (85-189)||(12703085-12703189)
chr7 (85-205)||(44786172-44786292)
chr7 (85-205)||(44792813-44792933)
chr7 (85-205)||(20702689-20702809)
chr7 (85-205)||(32767962-32768082)
chr7 (89-196)||(11238673-11238780)
chr7 (89-197)||(1347803-1347911)
chr7 (89-196)||(11231986-11232093)
chr7 (85-196)||(12704356-12704467)
chr7 (85-205)||(33395-33515)
chr7 (85-205)||(70463-70583)
chr7 (85-205)||(74571-74692)
chr7 (162-238)||(12703184-12703260)
chr7 (85-196)||(4318243-4318354)
chr7 (85-196)||(14148866-14148977)
chr7 (85-196)||(18531541-18531652)
chr7 (85-196)||(9410241-9410352)
chr7 (85-196)||(11262625-11262736)
chr7 (85-196)||(11547965-11548076)
chr7 (85-196)||(11554561-11554672)
chr7 (85-196)||(14953494-14953605)
chr7 (85-196)||(14959460-14959571)
chr7 (139-205)||(49051658-49051724)
chr7 (85-196)||(6016869-6016980)
chr7 (85-196)||(12692792-12692903)
chr7 (125-196)||(8706292-8706363)
chr7 (125-196)||(8719708-8719779)
chr7 (125-196)||(18585038-18585109)
chr7 (85-196)||(25038908-25039019)
chr7 (125-196)||(10869744-10869815)
chr7 (125-196)||(10875824-10875895)
chr7 (125-196)||(23519692-23519763)
chr7 (85-196)||(13570190-13570301)
chr7 (133-196)||(18553278-18553341)
chr7 (85-177)||(7536501-7536593)
chr7 (85-145)||(26420325-26420385)
chr7 (85-145)||(44408057-44408117)
[»] chr6 (61 HSPs)
chr6 (85-238)||(6980914-6981067)
chr6 (85-238)||(20649491-20649644)
chr6 (85-238)||(2869833-2869986)
chr6 (85-238)||(2876448-2876601)
chr6 (85-238)||(12762957-12763110)
chr6 (85-238)||(4233196-4233349)
chr6 (87-238)||(8229143-8229294)
chr6 (87-238)||(18931332-18931483)
chr6 (87-238)||(29587379-29587530)
chr6 (87-238)||(29593520-29593671)
chr6 (85-238)||(20060905-20061058)
chr6 (89-238)||(14059318-14059467)
chr6 (87-238)||(30637830-30637980)
chr6 (90-238)||(30597473-30597621)
chr6 (85-238)||(18194222-18194375)
chr6 (85-238)||(27327754-27327907)
chr6 (85-238)||(27388494-27388647)
chr6 (89-238)||(30694618-30694767)
chr6 (85-205)||(1538642-1538762)
chr6 (85-205)||(1544741-1544861)
chr6 (85-238)||(17031126-17031279)
chr6 (85-196)||(26130766-26130877)
chr6 (125-238)||(8797446-8797559)
chr6 (85-205)||(17037033-17037153)
chr6 (85-205)||(28258152-28258272)
chr6 (85-205)||(28264776-28264896)
chr6 (85-205)||(28336901-28337021)
chr6 (85-205)||(28343525-28343645)
chr6 (85-196)||(22331737-22331848)
chr6 (85-196)||(34832952-34833063)
chr6 (125-238)||(27430021-27430134)
chr6 (85-196)||(16372156-16372267)
chr6 (125-205)||(20802044-20802124)
chr6 (85-196)||(14098924-14099035)
chr6 (85-196)||(25595050-25595161)
chr6 (85-196)||(34369671-34369782)
chr6 (85-192)||(3708180-3708287)
chr6 (85-196)||(25117741-25117852)
chr6 (85-196)||(19808824-19808935)
chr6 (85-196)||(25111138-25111249)
chr6 (80-196)||(4168222-4168338)
chr6 (80-196)||(4208902-4209018)
chr6 (125-196)||(27186007-27186078)
chr6 (125-196)||(27207843-27207914)
chr6 (125-196)||(27241314-27241385)
chr6 (125-196)||(27263162-27263233)
chr6 (125-196)||(28314869-28314940)
chr6 (155-205)||(28287644-28287694)
chr6 (85-196)||(22759149-22759259)
chr6 (85-196)||(24314777-24314888)
chr6 (89-196)||(31316794-31316901)
chr6 (125-196)||(32564980-32565051)
chr6 (85-205)||(14472558-14472678)
chr6 (125-196)||(17016660-17016731)
chr6 (125-196)||(16551758-16551829)
chr6 (125-196)||(16577124-16577195)
chr6 (125-196)||(16618185-16618256)
chr6 (125-196)||(16628314-16628385)
chr6 (85-196)||(23276976-23277087)
chr6 (85-141)||(31164544-31164600)
chr6 (85-145)||(34295765-34295825)
[»] chr5 (66 HSPs)
chr5 (85-238)||(27663487-27663640)
chr5 (85-238)||(27670127-27670280)
chr5 (85-238)||(17706628-17706781)
chr5 (89-238)||(22265200-22265349)
chr5 (85-238)||(41097920-41098073)
chr5 (85-238)||(41769497-41769650)
chr5 (85-238)||(22062579-22062732)
chr5 (85-238)||(41776071-41776224)
chr5 (85-238)||(24471945-24472098)
chr5 (85-238)||(27608994-27609147)
chr5 (85-238)||(27615600-27615753)
chr5 (85-238)||(34294250-34294403)
chr5 (87-238)||(25107039-25107190)
chr5 (87-238)||(25166132-25166283)
chr5 (87-238)||(16355100-16355251)
chr5 (87-238)||(16361759-16361910)
chr5 (87-238)||(34565093-34565244)
chr5 (87-238)||(34571748-34571899)
chr5 (90-238)||(23610157-23610305)
chr5 (90-238)||(23841553-23841701)
chr5 (85-238)||(14994733-14994886)
chr5 (85-238)||(23584395-23584548)
chr5 (85-238)||(15001376-15001529)
chr5 (85-238)||(1692134-1692287)
chr5 (85-238)||(18038365-18038518)
chr5 (85-238)||(27687026-27687179)
chr5 (85-205)||(40707409-40707529)
chr5 (85-205)||(40714051-40714171)
chr5 (89-238)||(19992138-19992287)
chr5 (85-238)||(25406680-25406833)
chr5 (89-236)||(22334519-22334666)
chr5 (85-238)||(22133253-22133406)
chr5 (85-238)||(22139945-22140098)
chr5 (85-238)||(37286478-37286631)
chr5 (85-238)||(37293181-37293334)
chr5 (89-205)||(27517040-27517155)
chr5 (89-205)||(27523677-27523792)
chr5 (89-236)||(22327865-22328012)
chr5 (89-202)||(41294136-41294249)
chr5 (85-204)||(17284355-17284474)
chr5 (85-238)||(22588349-22588502)
chr5 (85-202)||(29477652-29477769)
chr5 (85-205)||(15236478-15236598)
chr5 (85-202)||(29471057-29471174)
chr5 (85-238)||(37544296-37544450)
chr5 (85-196)||(23336986-23337097)
chr5 (125-238)||(33726114-33726227)
chr5 (85-196)||(14359517-14359628)
chr5 (85-196)||(15441652-15441763)
chr5 (85-196)||(19768645-19768756)
chr5 (85-196)||(19775241-19775352)
chr5 (85-196)||(21294961-21295072)
chr5 (85-196)||(23250237-23250348)
chr5 (85-196)||(25535285-25535396)
chr5 (85-196)||(25808184-25808295)
chr5 (85-196)||(22325624-22325735)
chr5 (125-196)||(22410336-22410407)
chr5 (125-196)||(20776185-20776256)
chr5 (125-196)||(21667544-21667615)
chr5 (125-196)||(29316715-29316786)
chr5 (125-196)||(22258211-22258282)
chr5 (86-190)||(24554836-24554940)
chr5 (85-167)||(24020586-24020668)
chr5 (85-196)||(22343794-22343905)
chr5 (1-31)||(1700671-1700701)
chr5 (85-175)||(22353194-22353284)
[»] chr4 (58 HSPs)
chr4 (85-238)||(19779988-19780141)
chr4 (85-238)||(17962023-17962176)
chr4 (85-238)||(4772351-4772504)
chr4 (85-234)||(8048194-8048343)
chr4 (85-234)||(8054807-8054956)
chr4 (85-238)||(12475274-12475427)
chr4 (85-238)||(12481904-12482057)
chr4 (85-238)||(18024126-18024279)
chr4 (85-238)||(23954402-23954555)
chr4 (85-238)||(23961064-23961217)
chr4 (85-238)||(36884433-36884586)
chr4 (87-238)||(8385089-8385240)
chr4 (87-238)||(8391744-8391895)
chr4 (87-238)||(14074085-14074236)
chr4 (87-238)||(15256863-15257014)
chr4 (87-238)||(17808668-17808819)
chr4 (85-238)||(15148710-15148863)
chr4 (85-238)||(15383192-15383345)
chr4 (85-238)||(22194874-22195027)
chr4 (87-238)||(17089678-17089829)
chr4 (87-238)||(29040599-29040750)
chr4 (85-238)||(15362387-15362540)
chr4 (85-238)||(16231540-16231693)
chr4 (85-238)||(20115397-20115550)
chr4 (85-205)||(18295913-18296033)
chr4 (85-238)||(14268156-14268309)
chr4 (85-238)||(15321792-15321945)
chr4 (85-238)||(7900869-7901022)
chr4 (85-238)||(14298526-14298679)
chr4 (85-238)||(51493516-51493669)
chr4 (85-205)||(26284606-26284726)
chr4 (85-205)||(40478435-40478555)
chr4 (85-238)||(6873074-6873227)
chr4 (85-238)||(14305150-14305303)
chr4 (85-205)||(40471762-40471882)
chr4 (85-205)||(17810560-17810680)
chr4 (85-205)||(14757120-14757240)
chr4 (85-198)||(9271802-9271915)
chr4 (125-238)||(18071423-18071536)
chr4 (85-148)||(17991367-17991430)
chr4 (85-196)||(35170925-35171036)
chr4 (85-167)||(386052-386134)
chr4 (85-196)||(16956348-16956459)
chr4 (85-196)||(14685468-14685579)
chr4 (85-196)||(23838730-23838841)
chr4 (85-196)||(30234876-30234987)
chr4 (85-196)||(12522381-12522492)
chr4 (85-196)||(14679259-14679370)
chr4 (85-196)||(19941852-19941963)
chr4 (85-196)||(23081885-23081996)
chr4 (85-196)||(27710042-27710153)
chr4 (85-196)||(53433674-53433785)
chr4 (125-196)||(12349312-12349383)
chr4 (85-196)||(41385443-41385554)
chr4 (125-196)||(55795754-55795825)
chr4 (125-196)||(12299636-12299707)
chr4 (85-196)||(9556827-9556938)
chr4 (85-196)||(35614236-35614346)
[»] chr3 (85 HSPs)
chr3 (85-238)||(37615647-37615800)
chr3 (85-238)||(26788502-26788655)
chr3 (85-238)||(26794092-26794245)
chr3 (85-238)||(418256-418409)
chr3 (85-238)||(14672897-14673050)
chr3 (85-238)||(31422250-31422403)
chr3 (85-238)||(5106581-5106734)
chr3 (85-238)||(6598974-6599127)
chr3 (85-238)||(6605654-6605807)
chr3 (85-238)||(26889711-26889864)
chr3 (85-238)||(10153432-10153585)
chr3 (85-238)||(10845981-10846133)
chr3 (85-238)||(48423624-48423777)
chr3 (85-238)||(48430402-48430555)
chr3 (87-238)||(16634107-16634258)
chr3 (87-238)||(16640717-16640868)
chr3 (87-238)||(43161382-43161533)
chr3 (87-238)||(43167619-43167770)
chr3 (87-238)||(1332760-1332910)
chr3 (85-238)||(16623752-16623905)
chr3 (85-238)||(16489367-16489520)
chr3 (85-238)||(53380049-53380201)
chr3 (85-238)||(53386701-53386853)
chr3 (87-238)||(16747538-16747689)
chr3 (87-238)||(16758270-16758421)
chr3 (85-238)||(5221660-5221813)
chr3 (89-205)||(13251008-13251124)
chr3 (89-205)||(13257654-13257770)
chr3 (85-205)||(41201495-41201615)
chr3 (85-238)||(5149665-5149818)
chr3 (85-205)||(23704466-23704586)
chr3 (85-205)||(23722922-23723042)
chr3 (85-205)||(23741378-23741498)
chr3 (89-196)||(41092048-41092155)
chr3 (85-205)||(15726629-15726749)
chr3 (85-205)||(30066237-30066357)
chr3 (85-196)||(14499625-14499736)
chr3 (85-205)||(11070359-11070479)
chr3 (85-205)||(11165227-11165347)
chr3 (85-193)||(15691975-15692083)
chr3 (85-238)||(20057100-20057253)
chr3 (85-238)||(20063738-20063891)
chr3 (85-196)||(15825961-15826072)
chr3 (125-238)||(3690875-3690988)
chr3 (125-238)||(10904483-10904596)
chr3 (125-238)||(10911155-10911268)
chr3 (85-196)||(10236092-10236202)
chr3 (85-196)||(15991801-15991912)
chr3 (85-196)||(17710289-17710400)
chr3 (85-196)||(19809326-19809437)
chr3 (125-238)||(10003893-10004006)
chr3 (125-238)||(10010540-10010653)
chr3 (85-196)||(839543-839654)
chr3 (85-167)||(22643036-22643118)
chr3 (85-196)||(1145249-1145360)
chr3 (85-196)||(4291069-4291180)
chr3 (129-196)||(4710596-4710663)
chr3 (85-196)||(24188074-24188185)
chr3 (85-196)||(55149275-55149386)
chr3 (85-167)||(55023174-55023256)
chr3 (92-196)||(13315892-13315996)
chr3 (85-196)||(410448-410559)
chr3 (125-196)||(6608777-6608848)
chr3 (85-196)||(7986003-7986114)
chr3 (85-196)||(12891703-12891814)
chr3 (85-196)||(15343303-15343414)
chr3 (85-196)||(15349946-15350057)
chr3 (85-196)||(17252754-17252865)
chr3 (85-196)||(28350859-28350970)
chr3 (85-196)||(8720853-8720964)
chr3 (85-196)||(9072740-9072851)
chr3 (125-196)||(12482726-12482797)
chr3 (85-196)||(15397600-15397711)
chr3 (85-196)||(15404191-15404302)
chr3 (85-196)||(20723298-20723409)
chr3 (125-196)||(5420042-5420113)
chr3 (125-196)||(5426440-5426511)
chr3 (125-196)||(15584457-15584528)
chr3 (125-196)||(15591115-15591186)
chr3 (125-196)||(5201521-5201592)
chr3 (85-192)||(10326154-10326261)
chr3 (85-196)||(13321269-13321380)
chr3 (85-122)||(22670584-22670621)
chr3 (85-192)||(15337734-15337841)
chr3 (85-196)||(15360989-15361100)
[»] chr2 (50 HSPs)
chr2 (85-238)||(26877266-26877419)
chr2 (85-238)||(22320684-22320837)
chr2 (85-238)||(22326837-22326990)
chr2 (85-238)||(27216321-27216474)
chr2 (87-238)||(13306289-13306440)
chr2 (87-238)||(16986199-16986350)
chr2 (87-238)||(28431612-28431763)
chr2 (87-238)||(9340538-9340689)
chr2 (87-238)||(9489172-9489323)
chr2 (87-238)||(9608433-9608584)
chr2 (87-234)||(19489624-19489771)
chr2 (85-238)||(24913662-24913815)
chr2 (85-238)||(29233784-29233937)
chr2 (85-238)||(29347083-29347236)
chr2 (85-238)||(27599519-27599672)
chr2 (85-205)||(16997338-16997458)
chr2 (85-205)||(27617584-27617704)
chr2 (89-238)||(23171293-23171442)
chr2 (89-238)||(23582550-23582699)
chr2 (118-238)||(16922787-16922907)
chr2 (85-205)||(17003971-17004091)
chr2 (85-238)||(12829325-12829478)
chr2 (85-238)||(1843338-1843491)
chr2 (85-205)||(10101343-10101463)
chr2 (119-205)||(16928644-16928730)
chr2 (85-196)||(37318572-37318683)
chr2 (85-196)||(27197182-27197293)
chr2 (125-205)||(10866660-10866740)
chr2 (125-205)||(10873827-10873907)
chr2 (85-196)||(41604429-41604540)
chr2 (85-196)||(41610326-41610437)
chr2 (85-196)||(13970067-13970178)
chr2 (85-196)||(24715009-24715120)
chr2 (85-196)||(24872105-24872216)
chr2 (85-196)||(24879990-24880101)
chr2 (85-196)||(45057123-45057234)
chr2 (85-196)||(21138969-21139080)
chr2 (85-196)||(30970677-30970788)
chr2 (87-133)||(16980563-16980609)
chr2 (85-196)||(21146987-21147098)
chr2 (85-196)||(24503407-24503518)
chr2 (125-196)||(27369599-27369670)
chr2 (125-196)||(27376109-27376180)
chr2 (88-196)||(24640662-24640769)
chr2 (125-196)||(44380931-44381002)
chr2 (125-196)||(44387601-44387672)
chr2 (85-196)||(19645675-19645786)
chr2 (85-117)||(16928832-16928864)
chr2 (85-114)||(29282482-29282511)
chr2 (85-196)||(15477901-15478012)
[»] scaffold0155 (1 HSPs)
scaffold0155 (85-238)||(9514-9667)
[»] chr1 (35 HSPs)
chr1 (85-238)||(20215626-20215779)
chr1 (87-238)||(46157020-46157171)
chr1 (87-238)||(43078695-43078846)
chr1 (85-238)||(44844580-44844734)
chr1 (85-238)||(18599803-18599956)
chr1 (85-204)||(41478274-41478393)
chr1 (85-205)||(51328376-51328496)
chr1 (85-205)||(51335010-51335130)
chr1 (85-238)||(21828969-21829122)
chr1 (85-238)||(21844482-21844635)
chr1 (85-205)||(1011011-1011131)
chr1 (85-196)||(19063817-19063928)
chr1 (85-196)||(19105050-19105161)
chr1 (85-196)||(19111707-19111818)
chr1 (85-238)||(47659472-47659625)
chr1 (125-238)||(16345512-16345625)
chr1 (125-238)||(16352160-16352273)
chr1 (125-238)||(41356025-41356138)
chr1 (85-196)||(20524913-20525024)
chr1 (125-238)||(41348588-41348701)
chr1 (85-196)||(21438091-21438202)
chr1 (85-196)||(21806898-21807009)
chr1 (85-196)||(23763508-23763619)
chr1 (85-196)||(33385921-33386032)
chr1 (85-196)||(33392565-33392676)
chr1 (85-196)||(50887450-50887561)
chr1 (86-196)||(8305433-8305543)
chr1 (95-196)||(44756402-44756503)
chr1 (85-196)||(21835663-21835774)
chr1 (125-196)||(27898397-27898468)
chr1 (125-196)||(43063014-43063085)
chr1 (125-196)||(49334869-49334940)
chr1 (125-196)||(18626013-18626084)
chr1 (125-196)||(33394144-33394215)
chr1 (125-196)||(20138380-20138451)
[»] scaffold0028 (5 HSPs)
scaffold0028 (85-238)||(67763-67916)
scaffold0028 (85-238)||(41792-41945)
scaffold0028 (85-238)||(57299-57452)
scaffold0028 (87-196)||(7301-7410)
scaffold0028 (85-165)||(23363-23443)
[»] scaffold0052 (3 HSPs)
scaffold0052 (87-238)||(10614-10765)
scaffold0052 (87-238)||(57036-57187)
scaffold0052 (85-238)||(750-903)
[»] scaffold0061 (1 HSPs)
scaffold0061 (85-238)||(59158-59311)
[»] scaffold0032 (1 HSPs)
scaffold0032 (85-238)||(109022-109175)
[»] scaffold0017 (1 HSPs)
scaffold0017 (85-238)||(139322-139475)
[»] scaffold0140 (1 HSPs)
scaffold0140 (87-238)||(38959-39110)
[»] scaffold0109 (2 HSPs)
scaffold0109 (85-238)||(26897-27050)
scaffold0109 (85-148)||(43636-43699)
[»] scaffold0180 (1 HSPs)
scaffold0180 (84-197)||(3005-3118)
[»] scaffold0005 (1 HSPs)
scaffold0005 (85-205)||(307384-307504)
[»] scaffold0029 (2 HSPs)
scaffold0029 (85-205)||(105576-105696)
scaffold0029 (85-205)||(125811-125931)
[»] scaffold0349 (1 HSPs)
scaffold0349 (85-196)||(12719-12830)
[»] scaffold0525 (1 HSPs)
scaffold0525 (85-205)||(3574-3694)
[»] scaffold0431 (1 HSPs)
scaffold0431 (85-196)||(12741-12852)
[»] scaffold0156 (1 HSPs)
scaffold0156 (85-196)||(3069-3180)
[»] scaffold0141 (1 HSPs)
scaffold0141 (85-238)||(38297-38450)
[»] scaffold0049 (1 HSPs)
scaffold0049 (85-238)||(76362-76515)
[»] scaffold0003 (1 HSPs)
scaffold0003 (125-238)||(57229-57342)
[»] scaffold0216 (1 HSPs)
scaffold0216 (85-205)||(8575-8695)
[»] scaffold0259 (1 HSPs)
scaffold0259 (85-196)||(10474-10585)
[»] scaffold0233 (1 HSPs)
scaffold0233 (85-196)||(14238-14349)
[»] scaffold0013 (1 HSPs)
scaffold0013 (85-196)||(9637-9748)
[»] scaffold0560 (1 HSPs)
scaffold0560 (85-205)||(5496-5616)
[»] scaffold0004 (2 HSPs)
scaffold0004 (85-196)||(78511-78623)
scaffold0004 (85-196)||(58116-58227)
[»] scaffold0144 (1 HSPs)
scaffold0144 (125-196)||(32050-32121)
[»] scaffold0009 (1 HSPs)
scaffold0009 (85-196)||(74293-74404)
[»] scaffold0138 (2 HSPs)
scaffold0138 (85-196)||(29905-30016)
scaffold0138 (85-117)||(41901-41933)
[»] scaffold0780 (1 HSPs)
scaffold0780 (85-196)||(411-522)
[»] scaffold0010 (1 HSPs)
scaffold0010 (85-196)||(242354-242465)
[»] scaffold0256 (1 HSPs)
scaffold0256 (85-194)||(24673-24782)
[»] scaffold0553 (1 HSPs)
scaffold0553 (125-196)||(9086-9157)
[»] scaffold0126 (1 HSPs)
scaffold0126 (125-196)||(3816-3887)
[»] scaffold0051 (1 HSPs)
scaffold0051 (85-196)||(37004-37115)
[»] scaffold0370 (1 HSPs)
scaffold0370 (85-167)||(17430-17512)
[»] scaffold0133 (1 HSPs)
scaffold0133 (125-196)||(22501-22572)
[»] scaffold0055 (1 HSPs)
scaffold0055 (87-119)||(61180-61212)
[»] scaffold0149 (2 HSPs)
scaffold0149 (159-196)||(4052-4089)
scaffold0149 (159-196)||(8483-8520)
[»] scaffold0096 (1 HSPs)
scaffold0096 (85-190)||(14691-14796)


Alignment Details
Target: scaffold0044 (Bit Score: 150; Significance: 2e-79; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 30935 - 30782
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30935 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 30836  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30835 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 30782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 72596 - 72749
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  72596 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 72695  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  72696 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 72749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 8467 - 8347
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||  |||||||||||||||||||||||||||||  |||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||    
T  8467 catacctgatattgattaggaatgaatgtaggatcagattgaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 8368  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    ||||||| |||| ||||||||    
T  8367 tcgcctcacgagcacaaccag 8347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 17669268 - 17669421
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17669268 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 17669367  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17669368 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 17669421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 17675920 - 17676073
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17675920 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 17676019  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17676020 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 17676073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 5534137 - 5534290
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  5534137 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactc 5534236  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5534237 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 5534290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 21915268 - 21915421
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  21915268 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactc 21915367  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21915368 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 21915421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 20019638 - 20019787
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20019638 catagctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 20019737  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatc 234  Q
    |||||| ||||||||||||||||||||||||||| ||||||| |||||||    
T  20019738 tcgccttgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatc 20019787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 22084239 - 22084086
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  |||    
T  22084239 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgaggggtactcgccatggcgagtaagagctc 22084140  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  22084139 tcgcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 22084086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 20013562 - 20013702
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20013562 catagctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 20013661  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtt 225  Q
    |||||| ||||||||||||||||||||||||||| ||||||    
T  20013662 tcgccttgcgagtacaaccaggatgaacttgtttgtgtgtt 20013702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 28455167 - 28455014
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| || ||||||||| |||||||||||||||||||||||    
T  28455167 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagctcagtttgtgagttgagtggtgctcgccatggcgagtaagtactc 28455068  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||| |||||||||||||||||||||| |||||||||| |||||||||||    
T  28455067 tcgcctcgggagtacaaccaggatgaacttgcttatgtgtttgtgcgatctgtg 28455014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 22123083 - 22123236
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||  |||||||||||| |||||||||||||| ||||    
T  22123083 catacctagtattgattaggaatgaatgtaagatcagagggaacccagaacaacattagtttgggagatgagtggtactctccatggcgagtaagaactc 22123182  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| ||||||||  |||||| |||||||||||    
T  22123183 tcgcctcgcgagtacaaccagaatgtacttgtttgagtgtttgtgcgatctgtg 22123236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 8354461 - 8354614
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||| ||||    
T  8354461 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtattcgccacggcgagtaagaactc 8354560  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| ||| |||||||| | ||| || || |||| |||||||||||    
T  8354561 tcgcctcgcgagcacagccaggatgtagttgcttgtgagtttgtgcgatctgtg 8354614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 19111630 - 19111514
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  19111630 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgc 19111531  T
Q  189 ctcgcgagtacaaccag 205  Q
    |||||||||||||||||    
T  19111530 ctcgcgagtacaaccag 19111514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 19117921 - 19117805
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  19117921 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgc 19117822  T
Q  189 ctcgcgagtacaaccag 205  Q
    |||||||||||||||||    
T  19117821 ctcgcgagtacaaccag 19117805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 18865739 - 18865586
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  18865739 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 18865640  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||| | ||| ||  |||||| |||| ||||||    
T  18865639 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgttctgtg 18865586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 22115418 - 22115529
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| || ||||    
T  22115418 catacctagtattgattgggaatgaatgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtgagaactc 22115517  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  22115518 tcgcctcgcgag 22115529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 18855344 - 18855191
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||| ||||||||||||||||||||||||||||||||  ||||||||||||||  |||| |||||  ||||||||||||||||||||||||||| ||||    
T  18855344 catacgtagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtgtgggagatgagtggtactcgccatggcgagtaagaactc 18855245  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||| | ||| ||  |||||| |||||||||||    
T  18855244 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 18855191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 29123493 - 29123373
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||| |  ||||||||||||||||||||||||||| ||||    
T  29123493 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 29123394  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  29123393 tcgcctcgcgagcacaaccag 29123373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 16882870 - 16883023
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||  ||||||||||  |||| |||||||||||||||||||||| |||     
T  16882870 catacctagtattgattaggaatgaatgtagaatcagattgaacccagaacaacactagtttgggagatgagcggtactcgccatggcgagtaagaactt 16882969  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||| | ||| ||  |||||| |||||||||||    
T  16882970 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 16883023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 19496758 - 19496645
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||  ||||    
T  19496758 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 19496659  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  19496658 ttgtgcgatctgtg 19496645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 22048354 - 22048201
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||| |||| | |||||   ||  |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||    
T  22048354 catacctagtattgattagggatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 22048255  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||| |||||| | | | ||| ||  |||||| |||||||||||    
T  22048254 tcgcctcgcgagtataaccagaaggtagttgcttgagtgtttgtgcgatctgtg 22048201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 196
Target Start/End: Complemental strand, 19905901 - 19905793
Alignment:
Q  88 acctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcg 187  Q
    |||||||| |||||||||||||||||||||  |||  ||||| |||||| | ||||||||| |||||| ||||||||||||||||||||| | |||||||    
T  19905901 acctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaccattagtttggaaattgactggtactcgccatggcgagtaggaactctcg 19905802  T
Q  188 cctcgcgag 196  Q
    |||||||||    
T  19905801 cctcgcgag 19905793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 22122120 - 22122195
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggt 160  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  22122120 catacctagtattgaattggaatgaatgtaggatcagagggaacccagaacaacattagtttgggagatgagtggt 22122195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 20023626 - 20023737
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||| | |||    |||||||||||| |||||||||||||||  | |||||||||||||| || ||| || |    
T  20023626 catacctagtaatgattaggaatgaatgtagggtaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcaagcaagaaccc 20023725  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  20023726 tcgcctcgcgag 20023737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 20527857 - 20527746
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  20527857 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 20527758  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  20527757 tcgcctcgcgag 20527746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 26934874 - 26934985
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||   ||||||||||| | ||||||||| | |||  | ||||||||||||||||||||| | ||    
T  26934874 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattc 26934973  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  26934974 tcgcctcgcgag 26934985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 18065699 - 18065628
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  18065699 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 18065628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 3216669 - 3216558
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||| |||| ||||||||||||  |||   || |||||||| | ||||||||| | |||  | ||||||||||||||||||||| | ||    
T  3216669 catacctagtaatgaatagggatgaatgtaggacaagattaaatccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattc 3216570  T
Q  185 tcgcctcgcgag 196  Q
    ||| ||||||||    
T  3216569 tcgtctcgcgag 3216558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 22124296 - 22124337
Alignment:
Q  155 agtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  22124296 agtggtactcgccatggcgagtgagaactctcgcctcgcgag 22124337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 40523059 - 40523212
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40523059 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 40523158  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40523159 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 40523212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 9510710 - 9510863
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9510710 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 9510809  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9510810 tcgcctcgcgagtacaaccaggatgagcttgtttatgtgtttatgcgatctgtg 9510863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 18164371 - 18164524
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18164371 catacctagcattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 18164470  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18164471 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 18164524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 234
Target Start/End: Complemental strand, 14337778 - 14337629
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14337778 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 14337679  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatc 234  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  14337678 tcgcctcgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatc 14337629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 85 - 234
Target Start/End: Complemental strand, 14331194 - 14331045
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14331194 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 14331095  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatc 234  Q
    |||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  14331094 tcgcctcgcgagtacaactaggatgaacttgtttgtgtgtttgtgcgatc 14331045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 60374 - 60527
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||  |||    
T  60374 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 60473  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  60474 tcgcctcgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatctgtg 60527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 22088 - 21937
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  22088 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 21989  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  21988 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 21937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 8201774 - 8201925
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  8201774 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 8201873  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  8201874 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 8201925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 15022538 - 15022384
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||  |||    
T  15022538 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagagctc 15022439  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtg-tttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||    
T  15022438 tcgcctcgcgagtacaaccaggatgaacttgattatgtgttttgtgcgatctgtg 15022384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 15155867 - 15156020
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||    
T  15155867 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 15155966  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| ||||| ||  |||||| |||||||||||    
T  15155967 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 15156020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 16406992 - 16407145
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||    
T  16406992 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacgttagtttgggagatgagtggtactcgccatggcgagtaagaactc 16407091  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| ||||| ||  |||||| |||||||||||    
T  16407092 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 16407145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 11366608 - 11366455
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||  |||||| |||||||||||||||||||||||||||| ||||    
T  11366608 catacctagtattgattaggaatgaatgtaagatcagagggaacccagaacaagtttatgttgggagttgagtggtactcgccatggcgagtaagaactc 11366509  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| ||| |||||||||| |||||||||||||| |||||||||||    
T  11366508 tcgcctcgcgagcacagccaggatgaagttgtttatgtgtttgtgcgatctgtg 11366455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 13684870 - 13684717
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||||||||||||||||| ||||    
T  13684870 catacctagtattgattaggaatgaatgtaggatcagagggaacccataacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 13684771  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| ||||| ||  |||||| |||||||||||    
T  13684770 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 13684717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 13691485 - 13691332
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||||||||||||||||| ||||    
T  13691485 catacctagtattgattaggaatgaatgtaggatcagagggaacccataacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 13691386  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| ||||| ||  |||||| |||||||||||    
T  13691385 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 13691332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 15162518 - 15162671
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  ||||||||||||||||||||||||||| ||||    
T  15162518 catacctagtattgattaggaatgaatgtaggatcagagggaacccaggacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 15162617  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| ||||| ||  |||||| |||||||||||    
T  15162618 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 15162671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 14655114 - 14655267
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||    
T  14655114 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccatggcgagtaaggactc 14655213  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| | | |||||||| | ||| ||  |||||| |||||||||||    
T  14655214 tcgcctcgcgagcatagccaggatgtagttgcttgagtgtttgtgcgatctgtg 14655267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 18176512 - 18176359
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| ||||    
T  18176512 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactc 18176413  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| ||| |||||||| | ||| || || |||| |||||||||||    
T  18176412 tcgcctcgcgagcacagccaggatgtagttgcttgtgagtttgtgcgatctgtg 18176359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 18183184 - 18183031
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| ||||    
T  18183184 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactc 18183085  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| ||| |||||||| | ||| || || |||| |||||||||||    
T  18183084 tcgcctcgcgagcacagccaggatgtagttgcttgtgagtttgtgcgatctgtg 18183031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 12703085 - 12703189
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12703085 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 12703184  T
Q  185 tcgcc 189  Q
    |||||    
T  12703185 tcgcc 12703189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 44786172 - 44786292
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||    
T  44786172 catacctagtattgattaggaatgaatgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactc 44786271  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||||||||||||    
T  44786272 tcgcctcgcgagtacaaccag 44786292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 44792813 - 44792933
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||    
T  44792813 catacctagtattgattaggaatgaatgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactc 44792912  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||||||||||||    
T  44792913 tcgcctcgcgagtacaaccag 44792933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 20702689 - 20702809
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  20702689 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 20702788  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  20702789 tcgcctcgcgagcacaaccag 20702809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 32768082 - 32767962
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  32768082 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 32767983  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  32767982 tcgcctcgcgagcacaaccag 32767962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 11238673 - 11238780
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||| || ||||||||    
T  11238673 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtgagaactctcgc 11238772  T
Q  189 ctcgcgag 196  Q
    ||||||||    
T  11238773 ctcgcgag 11238780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 1347911 - 1347803
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||| || ||||||||    
T  1347911 cctagtatttattaggaatgaatgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtgagaactctcgc 1347812  T
Q  189 ctcgcgagt 197  Q
    |||||||||    
T  1347811 ctcgcgagt 1347803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 11231986 - 11232093
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||| || ||||||||    
T  11231986 cctagtattgattaggaataaatgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtgagaactctcgc 11232085  T
Q  189 ctcgcgag 196  Q
    ||||||||    
T  11232086 ctcgcgag 11232093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 12704356 - 12704467
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  12704356 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 12704455  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  12704456 tcgcctcgcgag 12704467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 33515 - 33395
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  33515 catacctagtattaattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 33416  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||| ||||    
T  33415 tcgcctcgcgagcacatccag 33395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 70463 - 70583
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||||||||||   ||||||||||  ||||||||||||||||||||||||||| ||||    
T  70463 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaatactagtttgggagatgagtggtactcgccatggcgagtaagaactc 70562  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||| ||||    
T  70563 tcgcctcgcgagcacatccag 70583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 74571 - 74692
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaaccc-agaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtact 183  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||| |||||||   ||||||||||  ||||||||||||||||||||||||||| |||    
T  74571 catacctagtattgattaggattgaatgtaggatcagattgaaccccagaacaatactagtttgggagatgagtggtactcgccatggcgagtaagaact 74670  T
Q  184 ctcgcctcgcgagtacaaccag 205  Q
    ||||||||||||| ||| ||||    
T  74671 ctcgcctcgcgagcacatccag 74692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 12703184 - 12703260
Alignment:
Q  162 ctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  12703184 ctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggaagagcttgtttatgtgtttatgcgatctgtg 12703260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 4318243 - 4318354
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||| ||||||||  |||  ||||||||||||||  ||||||||||||||| ||||||||||||||||||||| | ||||    
T  4318243 catacctagtaatgattaggaatggatgtaggacaagattgaacccagaacaacactagtttgggaattgactggtactcgccatggcgagtaggaactc 4318342  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  4318343 tcgcctcgcgag 4318354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 14148977 - 14148866
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| ||||||||| |||||| ||||||||||||||||||||| | ||||    
T  14148977 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagtttggaaattgactggtactcgccatggcgagtaggaactc 14148878  T
Q  185 tcgcctcgcgag 196  Q
     |||||||||||    
T  14148877 ccgcctcgcgag 14148866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 18531652 - 18531541
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||  |||||||||||||| ||||||||  | |||| | ||||||||||||||||||||| ||||    
T  18531652 catacctagtaatgattagggatgaatgtaggacaagattgaacccagaacaacattagtttgaaacttgacttgtactcgccatggcgagtaagaactc 18531553  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  18531552 tcgcctcgcgag 18531541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 9410352 - 9410241
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||| |||||||||||||   |||    ||||| |||||| |||||||||||||||  ||||||||||||||||||||||| | ||    
T  9410352 catacctagtaatgattaagaatgaatgtagggcaagattagacccaaaacaactttagtttgggaattgtttggtactcgccatggcgagtaaggattc 9410253  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  9410252 tcgcctcgcgag 9410241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 11262736 - 11262625
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  11262736 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 11262637  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  11262636 tcgcctcgcgag 11262625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 11547965 - 11548076
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  11547965 catacctagtaatgattaggaatgaatgtaggaaaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 11548064  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  11548065 tcgcctcgcgag 11548076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 11554561 - 11554672
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  11554561 catacctagtaatgattaggaatgaatgtaggaaaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 11554660  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  11554661 tcgcctcgcgag 11554672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 14953605 - 14953494
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  14953605 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 14953506  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  14953505 tcgcctcgcgag 14953494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 14959571 - 14959460
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  14959571 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 14959472  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  14959471 tcgcctcgcgag 14959460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 49051724 - 49051658
Alignment:
Q  139 cttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||||||| |||||||||||||    
T  49051724 cttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcacgagtacaaccag 49051658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 6016869 - 6016980
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||   ||||||||||| | ||||||||| | |||  | ||||||||||||||||||||| | ||    
T  6016869 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattc 6016968  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  6016969 tcgcctcgcgag 6016980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 12692903 - 12692792
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||| |||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  12692903 catacctagtaatgattaggaatgaatgtcggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 12692804  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  12692803 tcgcctcgcgag 12692792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 8706363 - 8706292
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  8706363 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 8706292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 8719779 - 8719708
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  8719779 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 8719708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 18585038 - 18585109
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  18585038 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 18585109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 25038908 - 25039019
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||| | |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | ||||||||||||| |||||  |||||    
T  25038908 catacctagaaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggtgagtagatactc 25039007  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  25039008 tcgcctcgcgag 25039019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 10869815 - 10869744
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  10869815 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 10869744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 10875895 - 10875824
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  10875895 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 10875824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 23519692 - 23519763
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  23519692 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgaggactctcgcctcgcgag 23519763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 13570301 - 13570190
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    ||||| ||  || ||||||| |||||||  | ||||||||||||||||| ||| ||||    
T  13570301 catacctagtaatgattaggaatgaatgtagggcaagattagacccataatgactttagttttggaattgtttagtactcgccatggcgagcaagaactc 13570202  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  13570201 tcgcctcgcgag 13570190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 18553278 - 18553341
Alignment:
Q  133 aacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  18553278 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 18553341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 7536593 - 7536501
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagta 177  Q
    ||||||||||| ||| |||| ||||||||||||  |||   ||||||||||| | |||||||||   |||  |||||||||||||||||||||    
T  7536593 catacctagtaatgaatagggatgaatgtaggacaagattaaacccagaacagctttagtttggtttttgtctggtactcgccatggcgagta 7536501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 26420385 - 26420325
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtt 145  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| ||||||    
T  26420385 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagtt 26420325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 44408057 - 44408117
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtt 145  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| ||||||    
T  44408057 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagtt 44408117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 6981067 - 6980914
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6981067 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 6980968  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6980967 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 6980914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 20649491 - 20649644
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20649491 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 20649590  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20649591 tcgcctcgcgagtacaaccaggatgaatttgtttatgtgtttatgcgatctgtg 20649644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 2869833 - 2869986
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  2869833 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactc 2869932  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  2869933 tcgcctcgcgagtacaaccagaatgaacttgtttatgtgtttgtgcgatctgtg 2869986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 2876448 - 2876601
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  2876448 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactc 2876547  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  2876548 tcgcctcgcgagtacaaccagaatgaacttgtttatgtgtttgtgcgatctgtg 2876601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 12763110 - 12762957
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||    
T  12763110 catacctagtattgattaggaatgaatttaggatcagagggaacccagaacaagcttagtttgggagttgagaggtactcgccatggcgagtaagtactc 12763011  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12763010 tcgcctcacgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 12762957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 4233196 - 4233349
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  4233196 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttattttgggagttgagtggtactcgtcatggcgagtaagtactc 4233295  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||    
T  4233296 tcgcctcgcgagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 4233349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 8229294 - 8229143
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  8229294 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggttctcgccatggcgagtaagtactctc 8229195  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  8229194 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 8229143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 18931483 - 18931332
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  18931483 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 18931384  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  18931383 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 18931332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 29587379 - 29587530
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  29587379 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 29587478  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  29587479 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 29587530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 29593520 - 29593671
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  29593520 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 29593619  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  29593620 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 29593671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 20061058 - 20060905
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||| ||||||||||  |||    
T  20061058 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtgctcgccaaggcgagtaagagctc 20060959  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  20060958 tcgcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 20060905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 89 - 238
Target Start/End: Original strand, 14059318 - 14059467
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  14059318 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttggaagttgagtggtactcgccatggcgagtaagaactctcgc 14059417  T
Q  189 ctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||| ||||  |||||||||||||| |||||||||||    
T  14059418 ctcgcgagtacaaccagaatgagattgtttatgtgtttgtgcgatctgtg 14059467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 30637830 - 30637980
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | || ||||||||| |||||||||||||||||||||||||    
T  30637830 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtt-gtgagttgagtggtgctcgccatggcgagtaagtactctc 30637928  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  30637929 gcctcgcgagtacaaccaggatgaacttgagtatgtgtttgtgcgatctgtg 30637980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 90 - 238
Target Start/End: Complemental strand, 30597621 - 30597473
Alignment:
Q  90 ctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcc 189  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  30597621 ctagtattgattaggaatgaatgtaggatcagaaggaacccagaacaaccttggtttgggagttgagtggtactcgccatggcgagtaagtactctcgcc 30597522  T
Q  190 tcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||| |||||||  ||| | |||||||||||||| |||||||||||    
T  30597521 tcgcgagcacaaccaatatggaattgtttatgtgtttgtgcgatctgtg 30597473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 18194222 - 18194375
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| ||||    
T  18194222 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactc 18194321  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| ||| |||||||| | ||| || || |||| |||||||||||    
T  18194322 tcgcctcgcgagcacagccaggatgtagttgcttgtgagtttgtgcgatctgtg 18194375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 27327754 - 27327907
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||| ||||    
T  27327754 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagattagtttgggagttgagtggtactcgccatggcgagtaagaactc 27327853  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||| ||| ||| | ||| ||  |||||| |||||||||||    
T  27327854 tcgcctcgcgagcacaatcagaatgtagttgcttgagtgtttgtgcgatctgtg 27327907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 27388494 - 27388647
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||| ||||    
T  27388494 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagattagtttgggagttgagtggtactcgccatggcgagtaagaactc 27388593  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||| ||| ||| | ||| ||  |||||| |||||||||||    
T  27388594 tcgcctcgcgagcacaatcagaatgtagttgcttgagtgtttgtgcgatctgtg 27388647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 30694767 - 30694618
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||  ||| ||||||| |||||||||||||||||||||||||||| ||||||||    
T  30694767 cctagtattgattaggaatgaatgtaggatcagagggaacccaaaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactctcgc 30694668  T
Q  189 ctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||| ||| |||||||| | ||| || ||||||| |||||||||||    
T  30694667 ctcgcgagcacagccaggatgcagttgcttgtgtgtttgtgcgatctgtg 30694618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 1538642 - 1538762
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||||| |||||||||||||||||||||||||||| ||||    
T  1538642 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactc 1538741  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  1538742 tcgcctcgcgagcacaaccag 1538762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 1544741 - 1544861
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||||| |||||||||||||||||||||||||||| ||||    
T  1544741 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactc 1544840  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  1544841 tcgcctcgcgagcacaaccag 1544861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 17031279 - 17031126
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||   ||  ||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  17031279 catacctagtattgattaggaatgaatgtaggacaggatagaacccaaaacaacattagtttgggaattgagtggtactcgccatggcgagtaagaactc 17031180  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||| ||| ||| | ||| ||  |||||| |||||||||||    
T  17031179 tcgcctcgcgagcacaaacagaatgtagttgcttgagtgtttgtgcgatctgtg 17031126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 26130877 - 26130766
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| || |||     
T  26130877 catacctagtattgattgggaatgaatgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtgagaactt 26130778  T
Q  185 tcgcctcgcgag 196  Q
    ||| ||||||||    
T  26130777 tcgtctcgcgag 26130766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 8797559 - 8797446
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  8797559 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttgtgcgt 8797460  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  8797459 ttgtgcgatctgtg 8797446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 17037033 - 17037153
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||   ||  |||||||||||||| |||||||||||||| ||||||||| |||||| ||||| || ||||    
T  17037033 catacctagtattgattaggaatgaatgtaggacaggattgaacccagaacaacattagtttgggaattaagtggtacttgccatgacgagtgagaactc 17037132  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||| ||||    
T  17037133 tcgcctcgcgagcacatccag 17037153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 28258152 - 28258272
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||| | |||||   ||  |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||    
T  28258152 catacctagtattgattaggaatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 28258251  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||||||||||||    
T  28258252 tcgcctcgcgagtacaaccag 28258272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 28264776 - 28264896
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||| | |||||   ||  |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||    
T  28264776 catacctagtattgattaggaatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 28264875  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||||||||||||    
T  28264876 tcgcctcgcgagtacaaccag 28264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 28336901 - 28337021
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||| | |||||   ||  |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||    
T  28336901 catacctagtattgattaggaatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 28337000  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||||||||||||    
T  28337001 tcgcctcgcgagtacaaccag 28337021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 28343525 - 28343645
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||| | |||||   ||  |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||    
T  28343525 catacctagtattgattaggaatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 28343624  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||||||||||||    
T  28343625 tcgcctcgcgagtacaaccag 28343645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 22331848 - 22331737
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| ||||||||| |||||| ||||||||||||||||||||| | ||||    
T  22331848 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacgttagtttggaaattgactggtactcgccatggcgagtaggaactc 22331749  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  22331748 tcgcctcgcgag 22331737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 34833063 - 34832952
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||  | |||||||||||| ||||||||||||||| ||||||||||| |||||||||||| ||||    
T  34833063 catacctagtaatgattagggatgaatgtaggacaagattggacccagaacaactttagtttgggaattgtgtggtactcgctatggcgagtaagaactc 34832964  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  34832963 tcgcctcgcgag 34832952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 27430021 - 27430134
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| |||||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||  ||||    
T  27430021 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 27430120  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  27430121 ttgtgcgatctgtg 27430134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 16372267 - 16372156
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||| |||||| |||||||| ||||||||||||  |||  |||||||||||||| ||||||||| |||||| ||||||||||||||||||||| | ||||    
T  16372267 catatctagtaatgattagggatgaatgtaggacaagattgaacccagaacaacattagtttggaaattgactggtactcgccatggcgagtaggaactc 16372168  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  16372167 tcgcctcgcgag 16372156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 20802124 - 20802044
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 205  Q
    |||||||||||||| |||||||||||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20802124 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 20802044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 14099035 - 14098924
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  ||||||||||||||||||||||| | ||    
T  14099035 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaaggattc 14098936  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  14098935 tcgcctcgcgag 14098924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 25595050 - 25595161
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||| ||||||||  |||  | |||||||||||| |||||||||||||||   |||||||||||||||||||||| ||||    
T  25595050 catacctagtaatgattagggatggatgtaggacgagattggacccagaacaactttagtttgggaattgttgggtactcgccatggcgagtaagaactc 25595149  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  25595150 tcgcctcgcgag 25595161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 34369671 - 34369782
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||  |||||||||||||| ||||||||  | |||| | ||||||||||||||||||| ||||||    
T  34369671 catacctagtaatgattagggatgaatgtaggacaagattgaacccagaacaacattagtttgtaatttgacttgtactcgccatggcgagtatgtactc 34369770  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  34369771 tcgcctcgcgag 34369782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 3708180 - 3708287
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  ||||||||||||||||||||||| | ||    
T  3708180 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaaggattc 3708279  T
Q  185 tcgcctcg 192  Q
    ||||||||    
T  3708280 tcgcctcg 3708287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 25117852 - 25117741
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||  | |||||||||||| ||| |||||||| ||  |||||||||||||||| |||||| ||||    
T  25117852 catacctagtagtgattaggaatgaatgtagggcaagattggacccagaacaactttaatttgggaaatgtttggtactcgccatggctagtaagaactc 25117753  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  25117752 tcgcctcgcgag 25117741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 19808935 - 19808824
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  ||   ||||| |||||||| || |||||| | |||| ||||||||||||||||||||| | ||||    
T  19808935 catacctagtaatgattaggaatgaatgtaggacaagtttgaacctagaacaacattggtttggaatttgactggtactcgccatggcgagtaggaactc 19808836  T
Q  185 tcgcctcgcgag 196  Q
    ||||||| ||||    
T  19808835 tcgcctcacgag 19808824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 25111249 - 25111138
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||  |||||||||||||||||||   |||  | |||||||||||| ||| |||||||| ||  |||||||||||||||| |||||| ||||    
T  25111249 catacctagtagcgattaggaatgaatgtagggcaagattggacccagaacaactttaatttgggaaatgtttggtactcgccatggctagtaagaactc 25111150  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  25111149 tcgcctcgcgag 25111138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 4168338 - 4168222
Alignment:
Q  80 ctgctcatacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 179  Q
    |||| ||||||||||| ||||||||||||||||||||   |||    ||||| |||||| |||||||||||||||  ||||| |||||||||||| ||||    
T  4168338 ctgcacatacctagtaatgattaggaatgaatgtagggcaagattagacccataacaactttagtttgggaattgtttggtaatcgccatggcgattaag 4168239  T
Q  180 tactctcgcctcgcgag 196  Q
     | ||||||||||||||    
T  4168238 gattctcgcctcgcgag 4168222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 4209018 - 4208902
Alignment:
Q  80 ctgctcatacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 179  Q
    |||| ||||||||||| ||||||||||||||||||||   |||    ||||| |||||| |||||||||||||||  ||||| |||||||||||| ||||    
T  4209018 ctgcacatacctagtaatgattaggaatgaatgtagggcaagattagacccataacaactttagtttgggaattgtttggtaatcgccatggcgattaag 4208919  T
Q  180 tactctcgcctcgcgag 196  Q
     | ||||||||||||||    
T  4208918 gattctcgcctcgcgag 4208902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 27186078 - 27186007
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    |||||||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||||||||||||||    
T  27186078 gaacccagaacaacattagttgggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgag 27186007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 27207914 - 27207843
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    |||||||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||||||||||||||    
T  27207914 gaacccagaacaacattagttgggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgag 27207843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 27241314 - 27241385
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    |||||||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||||||||||||||    
T  27241314 gaacccagaacaacattagttgggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgag 27241385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 27263162 - 27263233
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    |||||||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||||||||||||||    
T  27263162 gaacccagaacaacattagttgggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgag 27263233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 28314940 - 28314869
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    |||||||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||||||||||||||    
T  28314940 gaacccagaacaacattagttgggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgag 28314869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 28287694 - 28287644
Alignment:
Q  155 agtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 205  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28287694 agtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 28287644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 22759259 - 22759149
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||| ||||||||||||  |||   ||||||||||| | |||||||||   |||  ||||||| ||||||||||||| | ||||    
T  22759259 catacctagtattgattagggatgaatgtaggacaagattaaacccagaacagctttagtttggtt-ttgtctggtacttgccatggcgagtaggaactc 22759161  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  22759160 tcgcctcgcgag 22759149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 24314777 - 24314888
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   ||     |||||||||||| |||||||||||||||  | |||||| |||||||||| ||| || |    
T  24314777 catacctagtaatgattaggaatgaatgtagggcaagtttagacccagaacaactttagtttgggaattgtttagtactcaccatggcgagcaagaaccc 24314876  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  24314877 tcgcctcgcgag 24314888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 31316794 - 31316901
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    ||||||| ||||||||||||||||||||   ||     |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| || |||||    
T  31316794 cctagtaatgattaggaatgaatgtagggcaagtttagacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgc 31316893  T
Q  189 ctcgcgag 196  Q
    ||||||||    
T  31316894 ctcgcgag 31316901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 32564980 - 32565051
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  32564980 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 32565051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 14472678 - 14472558
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    ||||||||||||||||||| || | |||  | ||||||||||||||||| |  | |||    
T  14472678 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaaccttagttgggaatttggcttgtactcgccatggcgagcatatgctc 14472579  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||| ||||    
T  14472578 tcgcctcgcgagcacatccag 14472558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 17016660 - 17016731
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  17016660 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 17016731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 16551758 - 16551829
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | |||||||| |||||||||||||||| || ||||||||||||||||    
T  16551758 gaacccaaaacaacattagttgggaatttgagtggcactcgccatggcgagtgagaactctcgcctcgcgag 16551829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 16577195 - 16577124
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | |||||||| |||||||||||||||| || ||||||||||||||||    
T  16577195 gaacccaaaacaacattagttgggaatttgagtggcactcgccatggcgagtgagaactctcgcctcgcgag 16577124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 16618185 - 16618256
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | |||||||| |||||||||||||||| || ||||||||||||||||    
T  16618185 gaacccaaaacaacattagttgggaatttgagtggcactcgccatggcgagtgagaactctcgcctcgcgag 16618256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 16628314 - 16628385
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | |||||||| |||||||||||||||| || ||||||||||||||||    
T  16628314 gaacccaaaacaacattagttgggaatttgagtggcactcgccatggcgagtgagaactctcgcctcgcgag 16628385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 23276976 - 23277087
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||   ||||||||||| | ||||||||| | | |    ||||||||||||||||||||| | ||    
T  23276976 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacatcattagtttggaactagtcccgtactcgccatggcgagtaagaattc 23277075  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  23277076 tcgcctcgcgag 23277087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 31164544 - 31164600
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacctt 141  Q
    ||||||||||| |||||||||||||||||||||| |||  | ||| |||||||||||    
T  31164544 catacctagtaatgattaggaatgaatgtaggatgagattggacctagaacaacctt 31164600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 34295765 - 34295825
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtt 145  Q
    ||||||||||  |||||||||||||||||||||  |||  ||||| |||||||| ||||||    
T  34295765 catacctagtgatgattaggaatgaatgtaggacaagattgaacctagaacaacattagtt 34295825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 2e-79; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 27663487 - 27663640
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27663487 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 27663586  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27663587 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 27663640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 27670127 - 27670280
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27670127 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 27670226  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27670227 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 27670280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 17706628 - 17706781
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17706628 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 17706727  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17706728 tcgcctcgcgagcacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 17706781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 22265349 - 22265200
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22265349 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgc 22265250  T
Q  189 ctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22265249 ctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 22265200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 41097920 - 41098073
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41097920 catacctagtattgattaggaatgaaagtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 41098019  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41098020 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 41098073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 41769650 - 41769497
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41769650 catacctagtattgattaggaatgaaagtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 41769551  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41769550 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 41769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 22062579 - 22062732
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||    
T  22062579 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagtactc 22062678  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062679 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 22062732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 41776224 - 41776071
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41776224 catacctagtattgattaggaatgaaagtaggatcagagggaacctagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 41776125  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41776124 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 41776071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 24471945 - 24472098
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  24471945 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagtactc 24472044  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24472045 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 24472098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 27609147 - 27608994
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  27609147 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttaatttgggagttgagtggtactcgccatggcgagtaagtactc 27609048  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  27609047 tcgcctcgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatctgtg 27608994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 27615753 - 27615600
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  27615753 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttaatttgggagttgagtggtactcgccatggcgagtaagtactc 27615654  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||| ||||||||||||||||||| ||||||| |||||||||||    
T  27615653 tcgcctcgcgagtaaaaccaggatgaacttgtttgtgtgtttgtgcgatctgtg 27615600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 34294250 - 34294403
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||    
T  34294250 catacctagtattgattaggaatgaatttaggatcacagggaacccagaacaagcttagtttgggagttgagtggtactcgccgtggcgagtaagtactc 34294349  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34294350 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 34294403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 25107190 - 25107039
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  25107190 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 25107091  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  25107090 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 25107039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 25166283 - 25166132
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  25166283 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 25166184  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  25166183 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 25166132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 16355251 - 16355100
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  16355251 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 16355152  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  16355151 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 16355100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 16361910 - 16361759
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  16361910 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 16361811  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  16361810 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 16361759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 34565244 - 34565093
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  34565244 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 34565145  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  34565144 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 34565093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 34571899 - 34571748
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  34571899 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 34571800  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  34571799 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 34571748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 90 - 238
Target Start/End: Complemental strand, 23610305 - 23610157
Alignment:
Q  90 ctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcc 189  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23610305 ctagtattgattaggaatgaatgtaggatcagaggaaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcc 23610206  T
Q  190 tcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||| |||||||| ||| | |||||||||||||| |||||||||||    
T  23610205 tcgcgagcacaaccagaatggaattgtttatgtgtttgtgcgatctgtg 23610157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 90 - 238
Target Start/End: Complemental strand, 23841701 - 23841553
Alignment:
Q  90 ctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcc 189  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23841701 ctagtattgattaggaatgaatgtaggatcagaggaaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcc 23841602  T
Q  190 tcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||| |||||||| ||| | |||||||||||||| |||||||||||    
T  23841601 tcgcgagcacaaccagaatggaattgtttatgtgtttgtgcgatctgtg 23841553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 14994733 - 14994886
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||    
T  14994733 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 14994832  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||||||||| ||  |||||| |||||||||||    
T  14994833 tcgcctcgcgagtacaaccagaatgaacttgcttgagtgtttgtgcgatctgtg 14994886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 23584548 - 23584395
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| ||||    
T  23584548 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaaggactc 23584449  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| | ||| |||||| ||||||| |||||||||||    
T  23584448 tcgcctcgcgagtacaaccagaacgaaattgtttttgtgtttgtgcgatctgtg 23584395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 15001376 - 15001529
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||    
T  15001376 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 15001475  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||||||||| ||  || ||| |||||||||||    
T  15001476 tcgcctcgcgagtacaaccagaatgaacttgcttgagtatttgtgcgatctgtg 15001529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 1692134 - 1692287
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||    
T  1692134 catacctagtattgattaggaatgaatgtaggatcagagagaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 1692233  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| ||||| ||  |||||| |||||||||||    
T  1692234 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 1692287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 18038365 - 18038518
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||||||||||||||||| ||||    
T  18038365 catacctagtattgattaggaatgaatgtaggatcagagggaacccaaaacaactttagtttgggagatgagtggtactcgccatggcgagtaagaactc 18038464  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| ||||| ||  |||||| |||||||||||    
T  18038465 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 18038518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 27687026 - 27687179
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||  ||||||||||||||||||||||| ||| ||||    
T  27687026 catacctagtattgattaggaatgaatgtaggatcagagagaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagcaagaactc 27687125  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| ||||| ||  |||||| |||||||||||    
T  27687126 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 27687179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 40707529 - 40707409
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||    
T  40707529 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactc 40707430  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||||||||||||    
T  40707429 tcgcctcgcgagtacaaccag 40707409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 40714171 - 40714051
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||    
T  40714171 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactc 40714072  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||||||||||||    
T  40714071 tcgcctcgcgagtacaaccag 40714051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 19992287 - 19992138
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||||||||| ||||||||    
T  19992287 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactctcgc 19992188  T
Q  189 ctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||| ||| |||||||| | ||| || ||||||  |||||||||||    
T  19992187 ctcgcgagcacagccaggatgcagttgcttgtgtgttggtgcgatctgtg 19992138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 25406833 - 25406680
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  25406833 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 25406734  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||| | ||| ||  |||||| |||||||||||    
T  25406733 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 25406680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 89 - 236
Target Start/End: Original strand, 22334519 - 22334666
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||||||||| ||| ||||    
T  22334519 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactatcgc 22334618  T
Q  189 ctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctg 236  Q
    |||||||| ||| |||||||| | ||| |  ||||||| |||||||||    
T  22334619 ctcgcgagcacagccaggatgcagttgctggtgtgtttgtgcgatctg 22334666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 22133406 - 22133253
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  22133406 catacctagtattgattaggaatgaatgtatgatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 22133307  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||| | ||| ||  |||||| |||||||||||    
T  22133306 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 22133253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 22140098 - 22139945
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  22140098 catacctagtattgattaggaatgaatgtatgatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 22139999  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||| | ||| ||  |||||| |||||||||||    
T  22139998 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 22139945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 37286478 - 37286631
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| ||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  37286478 catacctagtattgattaggattgaatgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 37286577  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| | ||| ||  |||||| |||||||||||    
T  37286578 tcgcctcgcgagtacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 37286631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 37293181 - 37293334
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| ||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  37293181 catacctagtattgattaggattgaatgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 37293280  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| | ||| ||  |||||| |||||||||||    
T  37293281 tcgcctcgcgagtacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 37293334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 27517155 - 27517040
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||| ||||||||| |||||||||||||||||| ||||||||    
T  27517155 cctagtattgattaggaatgaatgtaggatcagaggaaacccagaacaagcttagtt-gggagttgagtggtgctcgccatggcgagtaaggactctcgc 27517057  T
Q  189 ctcgcgagtacaaccag 205  Q
    |||||||||||||||||    
T  27517056 ctcgcgagtacaaccag 27517040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 27523792 - 27523677
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||| ||||||||| |||||||||||||||||| ||||||||    
T  27523792 cctagtattgattaggaatgaatgtaggatcagaggaaacccagaacaagcttagtt-gggagttgagtggtgctcgccatggcgagtaaggactctcgc 27523694  T
Q  189 ctcgcgagtacaaccag 205  Q
    |||||||||||||||||    
T  27523693 ctcgcgagtacaaccag 27523677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 89 - 236
Target Start/End: Original strand, 22327865 - 22328012
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  ||| ||||||| |||||||||||||||||||||||||||| ||| ||||    
T  22327865 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactttcgc 22327964  T
Q  189 ctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctg 236  Q
    |||||||| ||| |||||||| | ||| |  ||||||| |||||||||    
T  22327965 ctcgcgagcacagccaggatgcagttgctggtgtgtttgtgcgatctg 22328012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 41294136 - 41294249
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||||| |||||||||||||||||||||||||||| ||||||||    
T  41294136 cctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactctcgc 41294235  T
Q  189 ctcgcgagtacaac 202  Q
    |||||||| |||||    
T  41294236 ctcgcgagcacaac 41294249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 17284474 - 17284355
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||| |  ||||||||||||||||||||||||||| ||||    
T  17284474 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 17284375  T
Q  185 tcgcctcgcgagtacaacca 204  Q
    |||||||||||| |||||||    
T  17284374 tcgcctcgcgagcacaacca 17284355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 22588502 - 22588349
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  |||| |||||||||  ||||||||||  |||||||||||||||| |||||||||| ||||    
T  22588502 catacctagtattgattaggaatgaatgtaggatcagattgaactcagaacaacactagtttgggagatgagtggtactcgccaaggcgagtaagaactc 22588403  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||| || |||||||| ||| | ||| ||  |||||| |||||||||||    
T  22588402 tcgcctcgcaagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 22588349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 29477652 - 29477769
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||| |||||||||||||||||||||||||||  ||||||| ||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  29477652 catacctagttttgattaggaatgaatgtaggatcagattgaacccataacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 29477751  T
Q  185 tcgcctcgcgagtacaac 202  Q
    |||||||||||| |||||    
T  29477752 tcgcctcgcgagcacaac 29477769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 15236478 - 15236598
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||  |||||||| |  ||||||||||||||||||||||||||| ||||    
T  15236478 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 15236577  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||| ||||    
T  15236578 tcgcctcgcgagcacatccag 15236598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 29471057 - 29471174
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||| |||||||||||||||||||||||||||  ||||||| ||||||  |||||||| |  ||||||||||||||||||||||||||| ||||    
T  29471057 catacctagttttgattaggaatgaatgtaggatcagattgaacccataacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 29471156  T
Q  185 tcgcctcgcgagtacaac 202  Q
    |||||||||||| |||||    
T  29471157 tcgcctcgcgagcacaac 29471174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 37544450 - 37544296
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttggga-attgagtggtactcgccatggcgagtaagtact 183  Q
    ||||||||||||||||||||||||| | |||||   ||  |||||||||||||| | ||||||||| | | |||| ||||||||||||||||||||||||    
T  37544450 catacctagtattgattaggaatgattttaggacaggattgaacccagaacaacatcagtttgggagaatcagtgttactcgccatggcgagtaagtact 37544351  T
Q  184 ctcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||||||||||| ||| | ||| ||  |||||| |||||||||||    
T  37544350 ctcgcctcgcgagtacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 37544296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 23336986 - 23337097
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||| |||||| ||||||||| |||||| |||||||||||||||||||||  |||||    
T  23336986 catacctagtaatgattaggaatgaatgtaggacaagattgaacccataacaactttagtttggaaattgaatggtactcgccatggcgagtagatactc 23337085  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  23337086 tcgcctcgcgag 23337097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 33726227 - 33726114
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||  |||     
T  33726227 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgg 33726128  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  33726127 ttgtgcgatctgtg 33726114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 14359517 - 14359628
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||   ||  ||||| |||||||| || |||||| | |||| ||||||||||||||||||||| | ||||    
T  14359517 catacctagtaatgattaggaatgaatgtaggacatgattgaacctagaacaacattggtttggaatttgactggtactcgccatggcgagtaggaactc 14359616  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  14359617 tcgcctcgcgag 14359628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 15441652 - 15441763
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||| |||||| |||||| |||| |||  | | |||||||||||||||||  |||||    
T  15441652 catacctagtaatgattaggaatgaatgtaggacaagattgaacccataacaacattagttggggagttggcttgaactcgccatggcgagtagatactc 15441751  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  15441752 tcgcctcgcgag 15441763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 19768756 - 19768645
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  19768756 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 19768657  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  19768656 tcgcctcgcgag 19768645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 19775352 - 19775241
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  19775352 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 19775253  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  19775252 tcgcctcgcgag 19775241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 21294961 - 21295072
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  21294961 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 21295060  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  21295061 tcgcctcgcgag 21295072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 23250348 - 23250237
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  23250348 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 23250249  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  23250248 tcgcctcgcgag 23250237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 25535396 - 25535285
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  25535396 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 25535297  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  25535296 tcgcctcgcgag 25535285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 25808184 - 25808295
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| || ||||||||||||  | ||||||||||||||||| ||| ||||    
T  25808184 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaacttttgtttgggaattgtttagtactcgccatggcgagcaagaactc 25808283  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  25808284 tcgcctcgcgag 25808295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 22325624 - 22325735
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||| |||| ||||||||||||  |||  |||||||||||| | ||||||||| | |||  | ||||||||||||||||||||| | ||    
T  22325624 catacctagtaatgaatagggatgaatgtaggaaaagattgaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattc 22325723  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  22325724 tcgcctcgcgag 22325735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 22410336 - 22410407
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  22410336 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtaagaactctcgcctcgcgag 22410407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 20776256 - 20776185
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    |||||||||||||| | |||| ||   |||||||||||||||||||||||||||| ||||||||||||||||    
T  20776256 gaacccagaacaacatcagttgggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgag 20776185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 21667544 - 21667615
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  21667544 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 21667615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 29316786 - 29316715
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  29316786 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 29316715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 22258211 - 22258282
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  22258211 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 22258282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 190
Target Start/End: Complemental strand, 24554940 - 24554836
Alignment:
Q  86 atacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactct 185  Q
    |||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||| ||||||||||  ||||||    
T  24554940 atacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggctagtactcgcaatggcgagtagatactct 24554841  T
Q  186 cgcct 190  Q
    |||||    
T  24554840 cgcct 24554836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 24020668 - 24020586
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgcc 167  Q
    ||||||||||| ||||||||| ||||||||||    ||  | |||||||||||| |||||||||||||||  |||||||||||    
T  24020668 catacctagtaatgattaggattgaatgtagggcaggattggacccagaacaactttagtttgggaattgtttggtactcgcc 24020586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 22343905 - 22343794
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||| |||| |||||| |||||  |||   |||||| |||||| ||||||||| | |||  | | ||||||||||||||||||| | ||    
T  22343905 catacctagtaatgaatagggatgaatataggacaagattaaacccaaaacaacattagtttggaacttgtcttgaactcgccatggcgagtaagaattc 22343806  T
Q  185 tcgcctcgcgag 196  Q
    |||| |||||||    
T  22343805 tcgcatcgcgag 22343794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 1700701 - 1700671
Alignment:
Q  1 gctgctcgaattggctgccatacaatgataa 31  Q
    |||||||||||||||||||||||||||||||    
T  1700701 gctgctcgaattggctgccatacaatgataa 1700671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 175
Target Start/End: Complemental strand, 22353284 - 22353194
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 175  Q
    ||||||||||| ||| |||| ||||||||||||  |||   ||||||||||| | ||||||||| | |||  | |||||||||||||||||    
T  22353284 catacctagtaatgaatagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgag 22353194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 19779988 - 19780141
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19779988 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 19780087  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19780088 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 19780141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 17962023 - 17962176
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17962023 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 17962122  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17962123 tcgcctcgcgagtacaaccaggatgaactcgtttatgtgtttatgcgatctgtg 17962176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 4772504 - 4772351
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4772504 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 4772405  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  4772404 tcgcctcgcgagtacaaccaggatgaacttggctatgtgtttgtgcgatctgtg 4772351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 8048194 - 8048343
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8048194 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 8048293  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatc 234  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  8048294 tcgcctcgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatc 8048343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 8054807 - 8054956
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8054807 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 8054906  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatc 234  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  8054907 tcgcctcgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatc 8054956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 12475427 - 12475274
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||    
T  12475427 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactc 12475328  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12475327 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 12475274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 12482057 - 12481904
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||    
T  12482057 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactc 12481958  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12481957 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 12481904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 18024126 - 18024279
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||    
T  18024126 catacctagtattgattaggaatgaatttaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgcgatggcgagtaagtactc 18024225  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18024226 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 18024279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 23954555 - 23954402
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||  ||    
T  23954555 catacctagcattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtacttgccatggcgagtaagttatc 23954456  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23954455 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 23954402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 23961217 - 23961064
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||  ||    
T  23961217 catacctagcattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtacttgccatggcgagtaagttatc 23961118  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23961117 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 23961064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 36884433 - 36884586
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||  |||    
T  36884433 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 36884532  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  36884533 tcgcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 36884586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 8385240 - 8385089
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  8385240 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 8385141  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  8385140 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 8385089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 8391895 - 8391744
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  8391895 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 8391796  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  8391795 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 8391744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 14074236 - 14074085
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  14074236 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 14074137  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  14074136 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 14074085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 15257014 - 15256863
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  15257014 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 15256915  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  15256914 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 15256863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 17808819 - 17808668
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  17808819 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 17808720  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  17808719 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 17808668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 15148863 - 15148710
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||  |||    
T  15148863 catacctagtattgattaggaatgaatgtaggatcagagggaacccaaaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 15148764  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  15148763 tcgcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 15148710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 15383192 - 15383345
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||  |||    
T  15383192 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 15383291  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||||||||    
T  15383292 tcgcctcgcgagtacagccaggatgaacttgattatgtgtttgtgcgatctgtg 15383345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 22195027 - 22194874
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||  |||    
T  22195027 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 22194928  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||    
T  22194927 tcgcctcgcgagtacaaccaggatgaacttgattttgtgtttgtgcgatctgtg 22194874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 17089678 - 17089829
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || | ||||||| |||||||||||||||||||||||||    
T  17089678 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagtggagtggtgctcgccatggcgagtaagtactctc 17089777  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  17089778 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 17089829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 29040599 - 29040750
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  29040599 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 29040698  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  29040699 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 29040750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 15362540 - 15362387
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||  |||    
T  15362540 catacctagtattgattaggaatgaatgtaggatcagagggaaccgagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 15362441  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  15362440 tcgcctcgcgagtacaaccaggatgaacttgattatgtgcttgtgcgatctgtg 15362387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 16231540 - 16231693
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||  |||    
T  16231540 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 16231639  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||| | |||||||||||||| |||||||||| |||||||||||    
T  16231640 tcgcctcgcgagtatagccaggatgaacttgattatgtgtttgtgcgatctgtg 16231693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 20115550 - 20115397
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||    
T  20115550 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaactttagtttgggagatgagtggtactcgccatggcgagtaagaactc 20115451  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| ||||| ||  |||||| |||||||||||    
T  20115450 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 20115397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 18296033 - 18295913
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||    
T  18296033 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactc 18295934  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||||||||||||    
T  18295933 tcgcctcgcgagtacaaccag 18295913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 14268156 - 14268309
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| |||     
T  14268156 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactt 14268255  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| ||| |||||||| | ||| ||  |||||| |||||||||||    
T  14268256 tcgcctcgcgagcacagccaggatgtagttgcttgagtgtttgtgcgatctgtg 14268309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 15321792 - 15321945
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||||| |||||||||||||||||||||||||||| ||||    
T  15321792 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactc 15321891  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||| | ||| ||  ||||||||||||||||||    
T  15321892 tcgcctcgcgagcacaaccagaatgtaattgcttgagtgtttatgcgatctgtg 15321945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 7900869 - 7901022
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  7900869 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 7900968  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| | ||| ||  |||||| |||||||||||    
T  7900969 tcgcctcgcgagtacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 7901022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 14298526 - 14298679
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||||||||| ||||    
T  14298526 catacctagtattgattaggaatgaatgtaagatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactc 14298625  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| ||| |||||||| | ||| || ||||||  |||||||||||    
T  14298626 tcgcctcgcgagcacagccaggatgcagttgcttgtgtgttggtgcgatctgtg 14298679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 51493516 - 51493669
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  51493516 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 51493615  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||| | ||| ||  |||||| |||||||||||    
T  51493616 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 51493669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 26284606 - 26284726
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  26284606 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 26284705  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  26284706 tcgcctcgcgagcacaaccag 26284726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 40478555 - 40478435
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  40478555 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 40478456  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  40478455 tcgcctcgcgagcacaaccag 40478435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 6873074 - 6873227
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||| |||||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  6873074 catacctagtattgattatgaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 6873173  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||| | ||| ||  |||||| |||| ||||||    
T  6873174 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgttctgtg 6873227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 14305150 - 14305303
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||| |||||| ||||    
T  14305150 catacctagcattgattaggaatgaatgtaagatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcaagtaagaactc 14305249  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| ||| |||||||| | ||| || ||||||  |||||| ||||    
T  14305250 tcgcctcgcgagcacagccaggatgcagttgcttgtgtgttggtgcgatatgtg 14305303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 40471882 - 40471762
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  40471882 catacctagtattgattaggaatgaatgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 40471783  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  40471782 tcgcctcgcgagcacaaccag 40471762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 17810680 - 17810560
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  17810680 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 17810581  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||| ||||    
T  17810580 tcgcctcgcgagcacatccag 17810560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 14757120 - 14757240
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  14757120 catacctagtattaattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 14757219  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||| ||||| ||| ||||    
T  14757220 tcgccttgcgagcacatccag 14757240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 9271802 - 9271915
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||| |||| ||||||||||||  ||   |||||||||||||| ||||||||||| ||||||||||||||||||||||||| || ||||    
T  9271802 catacctagtaatgaatagggatgaatgtaggacaagcctgaacccagaacaactttagtttgggatttgagtggtactcgccatggcgagtgagaactc 9271901  T
Q  185 tcgcctcgcgagta 198  Q
    ||||||||||||||    
T  9271902 tcgcctcgcgagta 9271915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 18071536 - 18071423
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| |||||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||  ||||    
T  18071536 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 18071437  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  18071436 ttgtgcgatctgtg 18071423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 17991367 - 17991430
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgg 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17991367 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgg 17991430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 35171036 - 35170925
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| ||||||||| |||||| ||||||||||||||||||||| | ||||    
T  35171036 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagtttggaaattgactggtactcgccatggcgagtaggaactc 35170937  T
Q  185 tcgcctcgcgag 196  Q
    ||| ||||||||    
T  35170936 tcgtctcgcgag 35170925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 386052 - 386134
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgcc 167  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||    
T  386052 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgcc 386134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 16956348 - 16956459
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| ||||    
T  16956348 catacctagtaatgattaggaatgaatgtagggctagattagacccagaacaactttagtttgggaattgtttcgtactcgccatggcgagcaagaactc 16956447  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  16956448 tcgcctcgcgag 16956459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 14685579 - 14685468
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaa-ttgagtggtactcgccatggcgagtaagtact 183  Q
    ||||||||||| |||||||||||||||||||||| |||  ||||| |||||||| ||| |||||||| |||  | |||||||||||||||||||  ||||    
T  14685579 catacctagtaatgattaggaatgaatgtaggataagattgaacctagaacaacatta-tttgggaagttggcttgtactcgccatggcgagtagatact 14685481  T
Q  184 ctcgcctcgcgag 196  Q
    |||||||||||||    
T  14685480 ctcgcctcgcgag 14685468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 23838841 - 23838730
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  23838841 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 23838742  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  23838741 tcgcctcgcgag 23838730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 30234876 - 30234987
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||| | || |||||||||  |||  | |||||||||||| |||||||||||||||  ||||||||||||||||||||||| |  |    
T  30234876 catacctagtaatgattatggattaatgtaggacaagattggacccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaagaatcc 30234975  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  30234976 tcgcctcgcgag 30234987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 12522492 - 12522381
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  ||| |||||| |||||||| |||||| |||| |||  | |||||||||||||  ||||  |||||    
T  12522492 catacctagtaatgattaggaatgaatgtaggacaagatggaacctagaacaacattagttggggagttggcttgtactcgccatggaaagtagatactc 12522393  T
Q  185 tcgcctcgcgag 196  Q
    || |||||||||    
T  12522392 tcacctcgcgag 12522381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 14679370 - 14679259
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||  || | |||  | |||||||||||||||||||  |||||    
T  14679370 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagtagggaagttggcttgtactcgccatggcgagtagatactc 14679271  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  14679270 tcgcctcgcgag 14679259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 19941852 - 19941963
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| ||||||||| |||||  | ||||||||||||||||| ||| || |    
T  19941852 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttggaaattgtttagtactcgccatggcgagcaagaaccc 19941951  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  19941952 tcgcctcgcgag 19941963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 23081996 - 23081885
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    ||||| |||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  23081996 catacctagtaatgattaggaatgaatgtagggcaagattagacccaaaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 23081897  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  23081896 tcgcctcgcgag 23081885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 27710153 - 27710042
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    ||||| |||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  27710153 catacctagtaatgattaggaatgaatgtagggcaagattagacccataacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 27710054  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  27710053 tcgcctcgcgag 27710042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 53433785 - 53433674
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||   ||||||||||| | ||||||||| | |||  | ||||||||||||||||||||| | ||    
T  53433785 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattc 53433686  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  53433685 tcgcctcgcgag 53433674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 12349312 - 12349383
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  12349312 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 12349383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 41385443 - 41385554
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||| |||||||||||  |||  ||||| |||||||| |||||| || | ||   | |||||||||||||||||||  |||||    
T  41385443 catacctagtaatgattaggagtgaatgtaggacaagattgaacctagaacaacattagttgggaagttcgcttgtactcgccatggcgagtagatactc 41385542  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  41385543 tcgcctcgcgag 41385554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 55795825 - 55795754
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  55795825 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 55795754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 12299636 - 12299707
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  12299636 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 12299707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 9556938 - 9556827
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtact 183  Q
    ||||||||||| |||||||| |||||||||||   |||  ||||| ||||||||||||| |||||||| ||  | ||||||||||||||||| |  | ||    
T  9556938 catacctagtaatgattagggatgaatgtagggcaagattgaacctagaacaaccttag-ttgggaatctggcttgtactcgccatggcgagcagatgct 9556840  T
Q  184 ctcgcctcgcgag 196  Q
    |||||||||||||    
T  9556839 ctcgcctcgcgag 9556827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 35614346 - 35614236
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||| |||||| |||| ||| ||||||||||||  |||   |||| |||||||| |||||||||   |||  |||||||||||||||||||||  |||||    
T  35614346 catatctagtaatgataagggatgaatgtaggactagattaaacctagaacaactttagtttggtt-ttgtctggtactcgccatggcgagtagatactc 35614248  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  35614247 tcgcctcgcgag 35614236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 2e-79; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 37615800 - 37615647
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37615800 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 37615701  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37615700 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 37615647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 26788502 - 26788655
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26788502 catacctagtattggttaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 26788601  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26788602 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 26788655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 26794092 - 26794245
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26794092 catacctagtattggttaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 26794191  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26794192 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 26794245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 418409 - 418256
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||    
T  418409 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactc 418310  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  418309 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 418256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 14672897 - 14673050
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||    
T  14672897 catacctagtattgattaggaatgaatttaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgcgatggcgagtaagtactc 14672996  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14672997 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 14673050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 31422250 - 31422403
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  31422250 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagtactc 31422349  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31422350 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 31422403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 5106581 - 5106734
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||| |||||||||||||||||||||||||    
T  5106581 catacctagtattgattaggaatgaatgtaggatcagagggagcccagaacaaccttagtttgggagatgagtgttactcgccatggcgagtaagtactc 5106680  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5106681 tcgcctcgcgagtacaactaggatgaacttgtttatgtgtttatgcgatctgtg 5106734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 6599127 - 6598974
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||    
T  6599127 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagatgagtgttactcgccatggcgagtaagtactc 6599028  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  6599027 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttgtgcaatctgtg 6598974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 6605807 - 6605654
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||    
T  6605807 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagatgagtgttactcgccatggcgagtaagtactc 6605708  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  6605707 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttgtgcaatctgtg 6605654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 26889864 - 26889711
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||  |||    
T  26889864 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 26889765  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  26889764 tcgcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 26889711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 10153432 - 10153585
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| ||||    
T  10153432 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactc 10153531  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  10153532 tcgcctcgcgagcacaaccaggatgaacttgtttgtgtgtttgtgcgatctgtg 10153585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 10845981 - 10846133
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  10845981 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttaatttgggagttgagtggtactcgccatggcgagtaagtactc 10846080  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| |||||||||||| |||| || |||||||||||    
T  10846081 tcgcctcgcgagtacaaccagaatgaacttgtttgtgtg-ttgtgcgatctgtg 10846133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 48423777 - 48423624
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| || ||||||||| |||||||||||||||||||||||    
T  48423777 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagctcagtttgtgagttgagtggtgctcgccatggcgagtaagtactc 48423678  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  48423677 tcgcctcgcgagtacaaccaggatgaacttgcttatgtgtttgtgcgatctgtg 48423624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 48430555 - 48430402
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| || ||||||||| |||||||||||||||||||||||    
T  48430555 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagctcagtttgtgagttgagtggtgctcgccatggcgagtaagtactc 48430456  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  48430455 tcgcctcgcgagtacaaccaggatgaacttgcttatgtgtttgtgcgatctgtg 48430402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 16634258 - 16634107
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  16634258 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 16634159  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  16634158 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 16634107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 16640868 - 16640717
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  16640868 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 16640769  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  16640768 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 16640717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 43161533 - 43161382
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  43161533 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 43161434  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  43161433 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 43161382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 43167770 - 43167619
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  43167770 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 43167671  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  43167670 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 43167619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 1332760 - 1332910
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | || ||||||||| |||||||||||||||||||||||||    
T  1332760 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtt-gtgagttgagtggtgctcgccatggcgagtaagtactctc 1332858  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  1332859 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 1332910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 16623752 - 16623905
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  16623752 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccatggcgagtaagtactc 16623851  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| | ||| ||  |||||| |||||||||||    
T  16623852 tcgcctcgcgagtacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 16623905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 16489367 - 16489520
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||| |||||||||| ||||    
T  16489367 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaactttagtttgggagatgagtggtactcgccacggcgagtaagaactc 16489466  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| ||||| ||  |||||| |||||||||||    
T  16489467 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 16489520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 53380049 - 53380201
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  53380049 catacctagtattgattaggaatgaatgtaggatcagaggggacccataacaaccttagtttggaagttgagtggtactcgccatggcgagtaaggactc 53380148  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||| |||||| ||| |||||||||||| ||| ||| |||||||||||    
T  53380149 tcgcctcgcgggtacaatcagaatgaacttgtttgtgt-tttgtgcgatctgtg 53380201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 53386701 - 53386853
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  53386701 catacctagtattgattaggaatgaatgtaggatcagaggggacccataacaaccttagtttggaagttgagtggtactcgccatggcgagtaaggactc 53386800  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||| |||||| ||| |||||||||||| ||| ||| |||||||||||    
T  53386801 tcgcctcgcgggtacaatcagaatgaacttgtttgtgt-tttgtgcgatctgtg 53386853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 16747538 - 16747689
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||   |||||  |||||||||||||||| ||| |||||    
T  16747538 tacctagtattgattaggaatgaatgtaggatcagagaaagcccagaacaaccttagtttgggagaagagtgtcactcgccatggcgagtgagtgctctc 16747637  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  16747638 gcctcgcgagtacaaccaggacgaacttgtttatgtgtttgtgcgatctgtg 16747689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 16758270 - 16758421
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||   | |||||||||||||||||||||||   |||||  |||||||||||||||| ||| |||||    
T  16758270 tacctagtattgattaggaatgaatgtaggatcagataaagcccagaacaaccttagtttgggagaagagtgtcactcgccatggcgagtgagtgctctc 16758369  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  16758370 gcctcgcgagtacaaccaggacgaacttgtttatgtgtttgtgcgatctgtg 16758421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 5221813 - 5221660
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || |||||||||| ||||    
T  5221813 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgacacggcgagtaagaactc 5221714  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| ||| |||||||  | ||| ||  |||||| |||||||||||    
T  5221713 tcgcctcgcgagcacagccaggatatagttgcttgagtgtttgtgcgatctgtg 5221660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 13251124 - 13251008
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| |||||||||||||||||| ||||||||    
T  13251124 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttggaagttgagtggtgctcgccatggcgagtaagaactctcgc 13251025  T
Q  189 ctcgcgagtacaaccag 205  Q
    |||||||||||||||||    
T  13251024 ctcgcgagtacaaccag 13251008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 13257770 - 13257654
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| |||||||||||||||||| ||||||||    
T  13257770 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttggaagttgagtggtgctcgccatggcgagtaagaactctcgc 13257671  T
Q  189 ctcgcgagtacaaccag 205  Q
    |||||||||||||||||    
T  13257670 ctcgcgagtacaaccag 13257654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 41201495 - 41201615
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  41201495 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 41201594  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  41201595 tcgcctcgcgagcacaaccag 41201615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 5149665 - 5149818
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||| | ||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  5149665 catacctagtattgattaggaatgaatttgggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 5149764  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||| | ||| ||  |||||| |||||||||||    
T  5149765 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 5149818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 23704466 - 23704586
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||| |  ||||||||||||||||||||||||||| ||||    
T  23704466 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 23704565  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  23704566 tcgcctcgcgagcacaaccag 23704586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 23722922 - 23723042
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||| |  ||||||||||||||||||||||||||| ||||    
T  23722922 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 23723021  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  23723022 tcgcctcgcgagcacaaccag 23723042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 23741378 - 23741498
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||| |  ||||||||||||||||||||||||||| ||||    
T  23741378 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 23741477  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  23741478 tcgcctcgcgagcacaaccag 23741498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 41092048 - 41092155
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| || ||||||||    
T  41092048 cctagtattgattaggaatgaatgtaggagcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtgagaactctcgc 41092147  T
Q  189 ctcgcgag 196  Q
    ||||||||    
T  41092148 ctcgcgag 41092155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 15726629 - 15726749
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||||||||||  ||||||||||  | ||||||||||||||||||||||||| ||||    
T  15726629 catacctagtattgattaggaatgaatgaaggatcagattgaacccagaacaacactagtttgggagataagtggtactcgccatggcgagtaagaactc 15726728  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  15726729 tcgcctcgcgagcacaaccag 15726749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 30066357 - 30066237
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  30066357 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 30066258  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||| ||||    
T  30066257 tcgcctcgcgagcacatccag 30066237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 14499736 - 14499625
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  14499736 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 14499637  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  14499636 tcgcctcgcgag 14499625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 11070479 - 11070359
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||  |||||||| |  ||||||||||||||||||||||||||| ||||    
T  11070479 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 11070380  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||| ||||    
T  11070379 tcgcctcgcgagcacatccag 11070359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 11165227 - 11165347
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||| ||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  11165227 catacctagtattgattaggattgaatgtaggatcagattgaacccaaaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 11165326  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||| ||||    
T  11165327 tcgcctcgcgagcacatccag 11165347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 15691975 - 15692083
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  |||||||||||| |||||||||||||| ||||    
T  15691975 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactctccatggcgagtaagaactc 15692074  T
Q  185 tcgcctcgc 193  Q
    |||||||||    
T  15692075 tcgcctcgc 15692083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 20057100 - 20057253
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||| | |||||   ||  |||||||||||||| | |||||||||  | |||| |||||||||||||||||||| ||||    
T  20057100 catacctagtattgattaggaatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaaggactc 20057199  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| | ||| ||  |||||| |||||||||||    
T  20057200 tcgcctcgcgagtacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 20057253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 20063738 - 20063891
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||| | |||||   ||  |||||||||||||| | |||||||||  | |||| |||||||||||||||||||| ||||    
T  20063738 catacctagtattgattaggaatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaaggactc 20063837  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| | ||| ||  |||||| |||||||||||    
T  20063838 tcgcctcgcgagtacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 20063891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 15826072 - 15825961
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||  | |||||||||||| |||||||||||||||  ||||||||||||||||||||||| ||||    
T  15826072 catacctagtaatgattagggatgaatgtaggacaagattggacccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaagaactc 15825973  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  15825972 tcgcctcgcgag 15825961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 3690988 - 3690875
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||  ||||    
T  3690988 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 3690889  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  3690888 ttgtgcgatctgtg 3690875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 10904596 - 10904483
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||  ||||    
T  10904596 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 10904497  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  10904496 ttgtgcgatctgtg 10904483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 10911268 - 10911155
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||  ||||    
T  10911268 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 10911169  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  10911168 ttgtgcgatctgtg 10911155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 10236092 - 10236202
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||| |||||||||||  |||  | |||||||||||| |||||||||||| ||  ||||||||||||||||||||||| ||||    
T  10236092 catacctagtaatgattagga-tgaatgtaggacaagattggacccagaacaactttagtttgggaaatgtttggtactcgccatggcgagtaagaactc 10236190  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  10236191 tcgcctcgcgag 10236202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 15991801 - 15991912
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||  | ||||| |||||| |||||||||||||||  ||||||||||||||||||||||| | ||    
T  15991801 catacctagtaatgattagggatgaatgtaggacaagattggacccaaaacaactttagtttgggaattgtttggtactcgccatggcgagtaaggattc 15991900  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  15991901 tcgcctcgcgag 15991912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 17710289 - 17710400
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||| |||||||||||| ||| |||||| ||||    
T  17710289 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgaatggtactcgccaaggcaagtaagaactc 17710388  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  17710389 tcgcctcgcgag 17710400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 19809437 - 19809326
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||| ||||||||||   ||   | |||||||||||| |||||||||||||||  ||||||||||||||||||||||| ||||    
T  19809437 catacctagtaatgattaggattgaatgtagggcaaggttggacccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaagaactc 19809338  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  19809337 tcgcctcgcgag 19809326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 10004006 - 10003893
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||  |||     
T  10004006 gaacccagaacaacttcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgg 10003907  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  10003906 ttgtgcgatctgtg 10003893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 10010653 - 10010540
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||  |||     
T  10010653 gaacccagaacaacttcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgg 10010554  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  10010553 ttgtgcgatctgtg 10010540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 839654 - 839543
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| |||| |||| | | |||||||||||||||||  |||||    
T  839654 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttggggagttgacttgaactcgccatggcgagtagatactc 839555  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  839554 tcgcctcgcgag 839543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 22643036 - 22643118
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgcc 167  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||||  |||||||||| |||||| |||||||||    
T  22643036 catacctagtattgattaggaatgaatgtaggatcagacttaacccagaacaacactagtttgggagttgagttgtactcgcc 22643118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 1145249 - 1145360
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  1145249 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 1145348  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  1145349 tcgcctcgcgag 1145360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 4291180 - 4291069
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    ||| |||||||| || ||||||||||||  ||||||||||||||||||| ||| ||||    
T  4291180 catacctagtaatgattaggaatgaatgtagggcaagattagacctagaacaacttttgtttgggaattgtttggtactcgccatggcgagcaagaactc 4291081  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  4291080 tcgcctcgcgag 4291069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 4710663 - 4710596
Alignment:
Q  129 ccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||    
T  4710663 ccagaacaactttagtttgggatttgagtggtactcgccatggcgagtgaggactctcgcctcgcgag 4710596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 24188185 - 24188074
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  24188185 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 24188086  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  24188085 tcgcctcgcgag 24188074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 55149386 - 55149275
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  55149386 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggattgtactcgccatggcgagtagatactc 55149287  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  55149286 tcgcctcgcgag 55149275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 55023256 - 55023174
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgcc 167  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||  |||||||| |  |||||||||||||||    
T  55023256 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgcc 55023174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 13315892 - 13315996
Alignment:
Q  92 agtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctc 191  Q
    |||| ||||||||| ||||||||||   |||  | ||||||||||||  | |||||||| |||||||||||||||||||||||||||  |||||||||||    
T  13315892 agtaatgattaggattgaatgtagggcaagattggacccagaacaacactggtttgggatttgagtggtactcgccatggcgagtaataactctcgcctc 13315991  T
Q  192 gcgag 196  Q
    |||||    
T  13315992 gcgag 13315996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 410448 - 410559
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    || ||||||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  410448 catacctagtaatgattaggaatgaatgtagggcaagattagacgcagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 410547  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  410548 tcgcctcgcgag 410559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 6608848 - 6608777
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    |||||||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||||||||||||||    
T  6608848 gaacccagaacaacattagttgggagtttgagtggtactcgccatggcgagtaaggactctcgcctcgcgag 6608777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 7986114 - 7986003
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||| ||||| |||||||||| ||||||| ||  |||  ||||| |||||||| ||||||||||| |||  | | ||||||||||||||||| ||||||    
T  7986114 catacttagtaatgattaggaaggaatgtaagacaagattgaacctagaacaacattagtttgggagttggcttgaactcgccatggcgagtaggtactc 7986015  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  7986014 tcgcctcgcgag 7986003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 12891814 - 12891703
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||   ||||||||||| | ||||||||| | |||  | ||||||||||||||||||||| | ||    
T  12891814 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattc 12891715  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  12891714 tcgcctcgcgag 12891703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 15343303 - 15343414
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    ||||| |||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  15343303 catacctagtaatgattaggaatgaatgtagggcaagattagacccataacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 15343402  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  15343403 tcgcctcgcgag 15343414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 15349946 - 15350057
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  15349946 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 15350045  T
Q  185 tcgcctcgcgag 196  Q
    || |||||||||    
T  15350046 tcacctcgcgag 15350057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 17252754 - 17252865
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||   ||||||||||| | ||||||||| | |||  | ||||||||||||||||||||| | ||    
T  17252754 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattc 17252853  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  17252854 tcgcctcgcgag 17252865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 28350859 - 28350970
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||  |||||||||||||||||||||  |||  |||||||||||||| |||||| |||| |||  |   |||||||||||||||||  |||||    
T  28350859 catacctagtgatgattaggaatgaatgtaggacaagattgaacccagaacaacattagttggggagttggcttcaactcgccatggcgagtagatactc 28350958  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  28350959 tcgcctcgcgag 28350970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 8720853 - 8720964
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | |||||||||||||| || | | || |    
T  8720853 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcaagcaggaaccc 8720952  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  8720953 tcgcctcgcgag 8720964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 9072740 - 9072851
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | |||||||||||||| || | | || |    
T  9072740 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcaagcaggaaccc 9072839  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  9072840 tcgcctcgcgag 9072851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 12482797 - 12482726
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  12482797 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 12482726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 15397600 - 15397711
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    ||||||||  || ||||||| |||||||  | ||||||||||||||||| ||| ||||    
T  15397600 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaatgactttagttttggaattgtttagtactcgccatggcgagcaagaactc 15397699  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  15397700 tcgcctcgcgag 15397711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 15404191 - 15404302
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    ||||||||  || ||||||| |||||||  | ||||||||||||||||| ||| ||||    
T  15404191 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaatgactttagttttggaattgtttagtactcgccatggcgagcaagaactc 15404290  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  15404291 tcgcctcgcgag 15404302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 20723409 - 20723298
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || |  ||  | |||||||||||||||||||  | |||    
T  20723409 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagctggcttgtactcgccatggcgagtagatgctc 20723310  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  20723309 tcgcctcgcgag 20723298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 5420042 - 5420113
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  5420042 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 5420113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 5426440 - 5426511
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  5426440 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 5426511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 15584457 - 15584528
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| ||||||||||||||||||||||||||| || |||||||||||||    
T  15584457 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtaagaaccctcgcctcgcgag 15584528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 15591115 - 15591186
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| ||||||||||||||||||||||||||| || |||||||||||||    
T  15591115 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtaagaaccctcgcctcgcgag 15591186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 5201592 - 5201521
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || |||||| |||||||||    
T  5201592 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcacctcgcgag 5201521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 10326261 - 10326154
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||   ||||||||||| | |||||||||   |||  ||||||||||||||||||||| | || |    
T  10326261 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagctttagtttggtttttgtctggtactcgccatggcgagtaggaaccc 10326162  T
Q  185 tcgcctcg 192  Q
    ||||||||    
T  10326161 tcgcctcg 10326154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 13321380 - 13321269
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||   ||  ||||||||| ||||||||| | | |  | ||||||||||||||||||||| | ||    
T  13321380 catacctagtaatgattagggatgaatgtaggacaagattaaattcagaacaacattagtttggaactagtcttgtactcgccatggcgagtaagaattc 13321281  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  13321280 tcgcctcgcgag 13321269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 22670584 - 22670621
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcaga 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22670584 catacctagtattgattaggaatgaatgtaggatcaga 22670621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 15337841 - 15337734
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    ||||| ||  || ||||||| |||||||  | ||||||||||||||||| ||| ||||    
T  15337841 catacctagtaatgattaggaatgaatgtagggcaagattagacccaaaatgactttagttttggaattgtttagtactcgccatggcgagcaagaactc 15337742  T
Q  185 tcgcctcg 192  Q
    ||||||||    
T  15337741 tcgcctcg 15337734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 15361100 - 15360989
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||| ||||||||   |||    ||||||||  || ||||||| |||||||  | ||||||||||||| ||| ||| ||||    
T  15361100 catacctagtaatgattaggaattaatgtagggcaagattagacccagaatgactttagttttggaattgtttagtactcgccatggtgagcaagaactc 15361001  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  15361000 tcgcctcgcgag 15360989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 26877266 - 26877419
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26877266 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 26877365  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26877366 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 26877419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 22320684 - 22320837
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22320684 catacctagcattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 22320783  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22320784 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 22320837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 22326837 - 22326990
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22326837 catacctagcattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 22326936  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22326937 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 22326990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 27216474 - 27216321
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  27216474 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 27216375  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  27216374 tcgcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 27216321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 13306289 - 13306440
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  13306289 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 13306388  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  13306389 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 13306440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 16986350 - 16986199
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  16986350 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 16986251  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  16986250 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 16986199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 28431612 - 28431763
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  28431612 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 28431711  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  28431712 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 28431763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 9340689 - 9340538
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  9340689 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 9340590  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  9340589 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 9340538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 9489323 - 9489172
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  9489323 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 9489224  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  9489223 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 9489172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 9608584 - 9608433
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  9608584 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 9608485  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  9608484 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 9608433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 19489624 - 19489771
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    |||||||||||| ||||||| |||| ||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  19489624 tacctagtattgtttaggaacgaatttaggatcagagggaacccataacaagcttagtttgggagttgagtggtactcgccatggcgagtaagtactctc 19489723  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatc 234  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  19489724 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttttgcgatc 19489771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 24913662 - 24913815
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||| ||||||||||| ||||    
T  24913662 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacactagtttgggagttgagtggtactcgccgtggcgagtaagaactc 24913761  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||||| ||| || ||||||| |||||||||||    
T  24913762 tcgcctcgcgagcacaaccagaatgaagttgcttgtgtgtttgtgcgatctgtg 24913815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 29233937 - 29233784
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | |||||||| ||||    
T  29233937 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacgacgagtaagaactc 29233838  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||||||| | ||| || || |||| |||||||||||    
T  29233837 tcgcctcgcgagcacaaccaggatgtagttgcttgtgagtttgtgcgatctgtg 29233784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 29347236 - 29347083
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | |||||||| ||||    
T  29347236 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacgacgagtaagaactc 29347137  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||||||| | ||| || || |||| |||||||||||    
T  29347136 tcgcctcgcgagcacaaccaggatgtagttgcttgtgagtttgtgcgatctgtg 29347083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 27599672 - 27599519
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||||||||| ||||    
T  27599672 catacctagtattgattaggaatgaatgtaagatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactc 27599573  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| ||| |||||||| | ||| || ||||||| |||||||||||    
T  27599572 tcgcctcgcgagcacagccaggatgcagttgcttgtgtgtttgtgcgatctgtg 27599519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 16997458 - 16997338
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||    
T  16997458 catacctagtattgattaggaatgaatgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactc 16997359  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||||||||||||    
T  16997358 tcgcctcgcgagtacaaccag 16997338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 27617704 - 27617584
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| ||||    
T  27617704 catacctagcattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactc 27617605  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||||||||||||    
T  27617604 tcgcctcgcgagtacaaccag 27617584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 23171442 - 23171293
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||||| ||||||||    
T  23171442 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacactaatttgggagttgagtggtactcgccatggcgagtaagaactctcgc 23171343  T
Q  189 ctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||| |||||||| ||| | ||| ||  |||||| |||||||||||    
T  23171342 ctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 23171293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 23582699 - 23582550
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||||| ||||||||    
T  23582699 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacactaatttgggagttgagtggtactcgccatggcgagtaagaactctcgc 23582600  T
Q  189 ctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||| |||||||| ||| | ||| ||  |||||| |||||||||||    
T  23582599 ctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 23582550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 118 - 238
Target Start/End: Complemental strand, 16922907 - 16922787
Alignment:
Q  118 tcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtt 217  Q
    |||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16922907 tcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgat 16922808  T
Q  218 tatgtgtttatgcgatctgtg 238  Q
    ||||||||| |||||||||||    
T  16922807 tatgtgtttgtgcgatctgtg 16922787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 17004091 - 17003971
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||    
T  17004091 catacctaatattgattaggaatgaatgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactc 17003992  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||||||||||||    
T  17003991 tcgcctcgcgagtacaaccag 17003971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 12829478 - 12829325
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  12829478 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 12829379  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||| | ||| ||  |||||| |||||||||||    
T  12829378 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 12829325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 1843491 - 1843338
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||  ||| ||||||| ||||||||||||||||||||||||| || ||||    
T  1843491 catacctagtattgattaggaatgaatgtaagatcagagggaacctagaacaagtttattttgggagttgagtggtactcgccatggcgagtgagaactc 1843392  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||| ||||||| |||||||||||| | ||| || ||||||  |||||||||||    
T  1843391 tcgcttcgcgagcacaaccaggatgcagttgcttgtgtgttggtgcgatctgtg 1843338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 10101343 - 10101463
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  10101343 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 10101442  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||| ||||    
T  10101443 tcgcctcgcgagcacatccag 10101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 16928730 - 16928644
Alignment:
Q  119 cagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 205  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  16928730 cagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccag 16928644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 37318683 - 37318572
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||| | |||    |||||||||||| |||||||||||||||  ||||||||||||||||||||||| ||||    
T  37318683 catacctagtaatgattaggaatgaatgtagggtaagattagacccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaagaactc 37318584  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  37318583 tcgcctcgcgag 37318572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 27197293 - 27197182
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||| | ||||||||| |||||| ||||||||||||||||||||| | ||||    
T  27197293 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaccattagtttggaaattgactggtactcgccatggcgagtaggaactc 27197194  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  27197193 tcgcctcgcgag 27197182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 10866740 - 10866660
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 205  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10866740 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 10866660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 10873907 - 10873827
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 205  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10873907 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 10873827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 41604429 - 41604540
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| ||||    
T  41604429 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaactc 41604528  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  41604529 tcgcctcgcgag 41604540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 41610326 - 41610437
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| ||||    
T  41610326 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaactc 41610425  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  41610426 tcgcctcgcgag 41610437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 13970067 - 13970178
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  13970067 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 13970166  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  13970167 tcgcctcgcgag 13970178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 24715120 - 24715009
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  24715120 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 24715021  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  24715020 tcgcctcgcgag 24715009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 24872105 - 24872216
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||| |||| ||||||||||||  |||   ||||||||||||| ||||||||| | |||  | ||||||||||||||||||||| ||||    
T  24872105 catacctagtaatgaatagggatgaatgtaggacaagattaaacccagaacaacattagtttggaacttgtcttgtactcgccatggcgagtaagaactc 24872204  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  24872205 tcgcctcgcgag 24872216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 24879990 - 24880101
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||| |||| ||||||||||||  |||   ||||||||||||| ||||||||| | |||  | ||||||||||||||||||||| ||||    
T  24879990 catacctagtaatgaatagggatgaatgtaggacaagattaaacccagaacaacattagtttggaacttgtcttgtactcgccatggcgagtaagaactc 24880089  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  24880090 tcgcctcgcgag 24880101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 45057123 - 45057234
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  45057123 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 45057222  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  45057223 tcgcctcgcgag 45057234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 21138969 - 21139080
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||| ||  |||  |||||||||||| | ||||||||| |  ||  | ||||||||||||||||||||| | ||    
T  21138969 catacctagtaatgattaggaatgaatgtatgacaagattgaacccagaacagctttagtttggaacctgtcttgtactcgccatggcgagtaagaattc 21139068  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  21139069 tcgcctcgcgag 21139080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 30970677 - 30970788
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||   ||||||||||| | ||||||||| | |||  | ||||||||||||||||||||| | ||    
T  30970677 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattc 30970776  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  30970777 tcgcctcgcgag 30970788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 16980609 - 16980563
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccaga 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16980609 tacctagtattgattaggaatgaatgtaggatcagagggaacccaga 16980563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 21146987 - 21147098
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||| ||||||||||||||  |||  |||||||||| | | ||||||||| |  ||  | ||||||||||||||||||||| | ||    
T  21146987 catacctagtaatgattatgaatgaatgtaggacaagattgaacccagaatagctttagtttggaacctgtcttgtactcgccatggcgagtaagaattc 21147086  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  21147087 tcgcctcgcgag 21147098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 24503518 - 24503407
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| |  | |||  | |||||||||||||||||||  |||||    
T  24503518 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttggaaagttggcttgtactcgccatggcgagtagatactc 24503419  T
Q  185 tcgcctcgcgag 196  Q
    ||||||| ||||    
T  24503418 tcgcctcccgag 24503407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 27369670 - 27369599
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  27369670 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 27369599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 27376180 - 27376109
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  27376180 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 27376109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 196
Target Start/End: Original strand, 24640662 - 24640769
Alignment:
Q  88 acctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcg 187  Q
    |||||||| |||||||| ||||||||||||  |||   ||||||||||| | |||||||||   |||  ||||||||||||||||||||| | |||||||    
T  24640662 acctagtaatgattagggatgaatgtaggacaagattaaacccagaacagctttagtttggtt-ttgtctggtactcgccatggcgagtaggaactctcg 24640760  T
Q  188 cctcgcgag 196  Q
    |||||||||    
T  24640761 cctcgcgag 24640769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 44380931 - 44381002
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  44380931 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 44381002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 44387601 - 44387672
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  44387601 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 44387672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 19645675 - 19645786
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||| |||| ||||||||||||  |||   |||||||||||   ||||||||| | |||  | ||||||||||||||||||||| | ||    
T  19645675 catacctagtaatgaatagggatgaatgtaggacaagattaaacccagaacagtattagtttggaacttgtcttgtactcgccatggcgagtaagaattc 19645774  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  19645775 tcgcctcgcgag 19645786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 16928864 - 16928832
Alignment:
Q  85 catacctagtattgattaggaatgaatgtagga 117  Q
    |||||||||||||||||||||||||||||||||    
T  16928864 catacctagtattgattaggaatgaatgtagga 16928832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 29282482 - 29282511
Alignment:
Q  85 catacctagtattgattaggaatgaatgta 114  Q
    ||||||||||||||||||||||||||||||    
T  29282482 catacctagtattgattaggaatgaatgta 29282511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 15478012 - 15477901
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtact 183  Q
    ||||||||||  |||||||| |||||||||||   |||  ||||| ||||||| ||||||| |||||| ||  | ||||||||||||||||| |  | ||    
T  15478012 catacctagttatgattagggatgaatgtagggcaagattgaacctagaacaatcttagtt-gggaatctggcttgtactcgccatggcgagcagatgct 15477914  T
Q  184 ctcgcctcgcgag 196  Q
    |||||||||||||    
T  15477913 ctcgcctcgcgag 15477901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 9514 - 9667
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9514 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 9613  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9614 tcacctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 9667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 5e-77; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 20215626 - 20215779
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  20215626 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactc 20215725  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20215726 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 20215779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 46157020 - 46157171
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  46157020 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 46157119  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  46157120 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 46157171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 43078846 - 43078695
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  43078846 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 43078747  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  43078746 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 43078695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 44844580 - 44844734
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||  |||    
T  44844580 catacctagtattgattaggaatgaatataggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 44844679  T
Q  185 tcgcctcgcgagtacaa-ccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |||||||||||    
T  44844680 tcgcctcgcgagtacaacccaggatgaacttgattatgtgtttgtgcgatctgtg 44844734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 18599803 - 18599956
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||||||||||||||||| ||||    
T  18599803 catacctagtattgattaggaatgaatgtaggatcagagggaacccataacaactttagtttgggagatgagtggtactcgccatggcgagtaagaactc 18599902  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| ||| ||||| ||   ||||| |||||||||||    
T  18599903 tcgcctcgcgagtacaaccagaatgtacttgcttgaatgtttgtgcgatctgtg 18599956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 41478274 - 41478393
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||    
T  41478274 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 41478373  T
Q  185 tcgcctcgcgagtacaacca 204  Q
    ||||||||||||||||||||    
T  41478374 tcgcctcgcgagtacaacca 41478393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 51328376 - 51328496
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| |||||| ||||    
T  51328376 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcaagtaagaactc 51328475  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||||||||||||    
T  51328476 tcgcctcgcgagtacaaccag 51328496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 51335010 - 51335130
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| |||||| ||||    
T  51335010 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcaagtaagaactc 51335109  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||||||||||||    
T  51335110 tcgcctcgcgagtacaaccag 51335130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 21829122 - 21828969
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||| |||||||||||||||||||||||||  ||||||||||||||  |||||||||| |||||||||||||||| ||||||||||| ||||    
T  21829122 catacctagtatggattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccttggcgagtaagaactc 21829023  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| ||||| || ||| | ||| ||  |||||| |||||||||||    
T  21829022 tcgcctcgcgagcacaactagaatgtagttgcttgagtgtttgtgcgatctgtg 21828969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 21844635 - 21844482
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||| |||||||||||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||| ||| ||||||| ||||    
T  21844635 catacctagtatggattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccttggtgagtaagaactc 21844536  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||| | ||| ||  |||||| |||||||||||    
T  21844535 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 21844482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 1011131 - 1011011
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  1011131 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 1011032  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||| ||||    
T  1011031 tcgcctcgcgagcacatccag 1011011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 19063928 - 19063817
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  |||||||||||||| |||||||||  ||||| ||||||||||||||||||||| | ||||    
T  19063928 catacctagtaatgattaggaatgaatgtaggacaagattgaacccagaacaacattagtttggatattgactggtactcgccatggcgagtaggaactc 19063829  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  19063828 tcgcctcgcgag 19063817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 19105161 - 19105050
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||| | ||||    
T  19105161 catacctagtaatgattaggaatgaatgtaggacaagattgaacccataacaacattagtttggaaattgactggtactcgccatggcgagtaggaactc 19105062  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  19105061 tcgcctcgcgag 19105050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 19111818 - 19111707
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  |||||||||||||| |||||||||  ||||| ||||||||||||||||||||| | ||||    
T  19111818 catacctagtaatgattaggaatgaatgtaggacaagattgaacccagaacaacattagtttggatattgactggtactcgccatggcgagtaggaactc 19111719  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  19111718 tcgcctcgcgag 19111707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 47659625 - 47659472
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||| |||| | |||||   ||  |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||    
T  47659625 catacctagtattgattagggatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 47659526  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| | | | ||| ||  |||||| |||||||||||    
T  47659525 tcgcctcgcgagtacaaccagaaggtagttgcttgagtgtttgtgcgatctgtg 47659472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 16345512 - 16345625
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||  ||||    
T  16345512 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 16345611  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  16345612 ttgtgcgatctgtg 16345625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 16352160 - 16352273
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||  ||||    
T  16352160 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 16352259  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  16352260 ttgtgcgatctgtg 16352273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 41356025 - 41356138
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||  ||||    
T  41356025 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 41356124  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  41356125 ttgtgcgatctgtg 41356138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 20524913 - 20525024
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| | |||||| ||||||||| | |||| ||||||||||||||||||||| | ||||    
T  20524913 catacctagtaatgattaggaatgaatgtaggacaagattgaacctataacaacattagtttggaagttgattggtactcgccatggcgagtaggaactc 20525012  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  20525013 tcgcctcgcgag 20525024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 41348588 - 41348701
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||||||||| ||||||||||||| ||| | ||| ||  ||||    
T  41348588 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcacgagtacaaccagaatgtagttgcttgagtgt 41348687  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  41348688 ttgtgcgatctgtg 41348701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 21438202 - 21438091
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  21438202 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 21438103  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  21438102 tcgcctcgcgag 21438091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 21806898 - 21807009
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  21806898 catacctagtaatgattaggaatgaatgtagggcaagatttgacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 21806997  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  21806998 tcgcctcgcgag 21807009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 23763619 - 23763508
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  23763619 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 23763520  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  23763519 tcgcctcgcgag 23763508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 33385921 - 33386032
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  33385921 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 33386020  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  33386021 tcgcctcgcgag 33386032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 33392565 - 33392676
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  33392565 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 33392664  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  33392665 tcgcctcgcgag 33392676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 50887450 - 50887561
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||   ||||||||||| | ||||||||| | |||  | ||||||||||||||||||||| | ||    
T  50887450 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattc 50887549  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  50887550 tcgcctcgcgag 50887561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 8305543 - 8305433
Alignment:
Q  86 atacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactct 185  Q
    |||||||||| |||||||| ||||||||||||  |||   ||||||||||||| ||||||||| | |||  | ||||||||||||||||||||| | |||    
T  8305543 atacctagtaatgattagggatgaatgtaggacaagattaaacccagaacaacattagtttggaacttgtctcgtactcgccatggcgagtaagaattct 8305444  T
Q  186 cgcctcgcgag 196  Q
     ||||||||||    
T  8305443 tgcctcgcgag 8305433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 44756503 - 44756402
Alignment:
Q  95 attgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcg 194  Q
    ||||||||||||||| | |||||   ||  ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||    
T  44756503 attgattaggaatgattttaggacaggattgaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcg 44756404  T
Q  195 ag 196  Q
    ||    
T  44756403 ag 44756402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 21835774 - 21835663
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    ||| |||||||| ||||| |||||||||  | ||||||||||||||||| ||| || |    
T  21835774 catacctagtaatgattaggaatgaatgtagggcaagatttgacctagaacaactttagtatgggaattgtttagtactcgccatggcgagcaagaaccc 21835675  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  21835674 tcgcctcgcgag 21835663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 27898397 - 27898468
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  27898397 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 27898468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 43063014 - 43063085
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  43063014 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 43063085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 49334940 - 49334869
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  49334940 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 49334869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 18626013 - 18626084
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  18626013 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 18626084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 33394215 - 33394144
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | || ||||| |||||||||||||||| || ||||||||||||||||    
T  33394215 gaacccaaaacaacattagttgggaatttaagtggcactcgccatggcgagtgagaactctcgcctcgcgag 33394144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 20138451 - 20138380
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||||||||||||||||| |||||| ||| | ||||||| ||||||||| |  | |||||||||||||||    
T  20138451 gaacccagaacaaccttagtt-gggaatctgacttgtactcgtcatggcgagcagatgctctcgcctcgcgag 20138380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 138; Significance: 3e-72; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 67916 - 67763
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  67916 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagtactc 67817  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  67816 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 67763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 41945 - 41792
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||| |  ||||||||||||||  |||||||||| |||||||||||||||||||||||||||| ||||    
T  41945 catacctagtattgattaggaatgaatgtaggatcatattgaacccagaacaacactagtttgggatttgagtggtactcgccatggcgagtaagaactc 41846  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||| | ||| ||  |||||| |||||||||||    
T  41845 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 41792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 57452 - 57299
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||  |||||||||| |||||||||||||||||||||||||||| ||||    
T  57452 catacctagtattgattaggaatgaatgtagaatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactc 57353  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||| ||| | ||| ||  |||||| |||||||||||    
T  57352 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 57299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 7410 - 7301
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||| |||||||| ||||||||||||  |||  | |||||||||||| |||||||||||||||  |||||||||||| |||||||||| ||||||    
T  7410 tacctagtaatgattagggatgaatgtaggacaagattggacccagaacaactttagtttgggaattgtttggtactcgccacggcgagtaagaactctc 7311  T
Q  187 gcctcgcgag 196  Q
    ||||||||||    
T  7310 gcctcgcgag 7301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 23443 - 23363
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcg 165  Q
    ||||||||||| |||||||| ||||||||||||  |||  | |||||||||||| |||||||||||||||  |||||||||    
T  23443 catacctagtaatgattagggatgaatgtaggacaagattggacccagaacaactttagtttgggaattgtttggtactcg 23363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 128; Significance: 3e-66; HSPs: 3)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 10765 - 10614
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  10765 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 10666  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  10665 gcctcgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatctgtg 10614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 57187 - 57036
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  57187 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 57088  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  57087 gcctcgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatctgtg 57036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 750 - 903
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||| ||||||||||| ||||    
T  750 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacactagtttgggagttgagtggtactcgccgtggcgagtaagaactc 849  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||||||||||| ||| ||  |||||| |||||||||||    
T  850 tcgcctcgcgagcacaaccaggatgaagttgcttgagtgtttgtgcgatctgtg 903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 59158 - 59311
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||    
T  59158 catacctagtattgattaggaatgaatgaaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagtgctc 59257  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||| |||||||||||||||||| ||||||||||||||| |||||||||||    
T  59258 tcgcctcacgagtacaaccaggatgagcttgtttatgtgtttgtgcgatctgtg 59311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 109022 - 109175
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  109022 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagaactc 109121  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    || |||||||||||||||||| ||||  |||||||||||||| |||||||||||    
T  109122 tcacctcgcgagtacaaccagaatgagattgtttatgtgtttgtgcgatctgtg 109175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 139475 - 139322
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||    
T  139475 catacctagtattgattaggaatgaatgaaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagtgctc 139376  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||| |||||||||||||||||| ||||||||||||||| |||||||||||    
T  139375 tcgcctcacgagtacaaccaggatgagcttgtttatgtgtttgtgcgatctgtg 139322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 39110 - 38959
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  39110 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 39011  T
Q  187 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  39010 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 38959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 27050 - 26897
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| ||||||  |||||||||| |||||||||||||||||||||||||||| ||||    
T  27050 catacctagtattgattaggaatgaatgtaggatcagattgaacccaaaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactc 26951  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    |||||||||||| |||||| | ||| | ||| ||  |||||| |||||||||||    
T  26950 tcgcctcgcgagcacaacctgaatgtagttgcttgagtgtttgtgcgatctgtg 26897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 43699 - 43636
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgg 148  Q
    ||||||||||| |||||||||||||||||||||  |||   ||||||||||||| |||||||||    
T  43699 catacctagtaatgattaggaatgaatgtaggacaagattaaacccagaacaacattagtttgg 43636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 3118 - 3005
Alignment:
Q  84 tcatacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtact 183  Q
    |||||||||||| |||||||||||||||||||||  |||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  3118 tcatacctagtaatgattaggaatgaatgtaggacaagattgaacccagaacaacgttagtttgggaattgagtggtactcgccatggcgagtaagaact 3019  T
Q  184 ctcgcctcgcgagt 197  Q
    ||||||||||||||    
T  3018 ctcgcctcgcgagt 3005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 307504 - 307384
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  || |||||||  ||||||||||||||||||||||||||| ||||    
T  307504 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactaatttgggagatgagtggtactcgccatggcgagtaagaactc 307405  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  307404 tcgcctcgcgagcacaaccag 307384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 105576 - 105696
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| |||| |  | |||||||| |||||||||||||||||||||||||||| ||||    
T  105576 catacctagtattgattaggaatgaatgtaggatcagattgaacccataacagcactggtttgggagttgagtggtactcgccatggcgagtaagaactc 105675  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  105676 tcgcctcgcgagcacaaccag 105696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 125811 - 125931
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |  | |||||||| |||||||||||||||||||||||||||| |||     
T  125811 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacagcactggtttgggagttgagtggtactcgccatggcgagtaagaactt 125910  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||||||||    
T  125911 tcgcctcgcgagcacaaccag 125931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 12830 - 12719
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| ||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  12830 catacctagtattgattaggattgaatgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 12731  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  12730 tcgcctcgcgag 12719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 3574 - 3694
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| |||||||||||||||||  ||||||||||||||  ||||| ||||  ||||||||||||||||||||||||||| ||||    
T  3574 catacctagtaatgattagggatgaatgtaggatcagattgaacccagaacaacactagttagggagatgagtggtactcgccatggcgagtaagaactc 3673  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| ||| ||||    
T  3674 tcgcctcgcgagcacatccag 3694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 12852 - 12741
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||  |||  | |||||||||||| |||||||||||||||  ||||||||||||||||||||||| ||||    
T  12852 catacctagtaatgattagggatgaatgtaggacaagattggacccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaagaactc 12753  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  12752 tcgcctcgcgag 12741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 3180 - 3069
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||| ||||    
T  3180 catacctagtaatgattaggaatgaatgtaggacaagattagacccagaacaaccttagtttgggaattgtttggtacttgccatggcgagtaagaactc 3081  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  3080 tcgcctcgcgag 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 38450 - 38297
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||| |||| | |||||   ||  |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||    
T  38450 catacctagtattgattagggatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 38351  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| | | | ||| ||  |||||| |||||||||||    
T  38350 tcgcctcgcgagtacaaccagaaggtagttgcttgagtgtttgtgcgatctgtg 38297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 76362 - 76515
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    |||||||||||||||||||| |||| | |||||   ||  |||||||||||||| | |||||||||  | |||| |||||||||||||||||||||||||    
T  76362 catacctagtattgattagggatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 76461  T
Q  185 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 238  Q
    ||||||||||||||||||||| | | | ||| ||  |||||| |||||||||||    
T  76462 tcgcctcgcgagtacaaccagaaggtagttgcttgagtgtttgtgcgatctgtg 76515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 57342 - 57229
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttatgtgt 224  Q
    |||||||||||||| |||||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||  ||||    
T  57342 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 57243  T
Q  225 ttatgcgatctgtg 238  Q
    || |||||||||||    
T  57242 ttgtgcgatctgtg 57229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 8575 - 8695
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||| |||  |||||||||||||| |||| |||| | |||| | ||||||||||||||||||||| ||||    
T  8575 catacctagtaatgattagggatgaatgtaggataagattgaacccagaacaacattaggttggaacttgacttgtactcgccatggcgagtaagaactc 8674  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    |||||||||||| || |||||    
T  8675 tcgcctcgcgagcactaccag 8695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 10585 - 10474
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  |||||||||||||| |||||| |||| |||  | | |||||||||||||||||  |||||    
T  10585 catacctagtaatgattaggaatgaatgtaggacaagattgaacccagaacaacattagttggggagttggcttgaactcgccatggcgagtagatactc 10486  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  10485 tcgcctcgcgag 10474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 14238 - 14349
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  |||||||||||||| |||||| |||| |||  | | |||||||||||||||||  |||||    
T  14238 catacctagtaatgattaggaatgaatgtaggacaagattgaacccagaacaacattagttggggagttggcttgaactcgccatggcgagtagatactc 14337  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  14338 tcgcctcgcgag 14349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 9748 - 9637
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  |||||||||||||| |||||| |||| |||    |||||||||||||||||||  |||||    
T  9748 catacctagtaatgattaggaatgaatgtaggacaagattgaacccagaacaacattagttggggagttggcctgtactcgccatggcgagtagatactc 9649  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  9648 tcgcctcgcgag 9637  T

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Target: scaffold0560 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 5496 - 5616
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||| |||  ||||| | |||||| |||| |||| | |||| | ||||||||||||||||||||| ||||    
T  5496 catacctagtaatgattagggatgaatgtaggataagattgaacctaaaacaacattaggttggaacttgacttgtactcgccatggcgagtaagaactc 5595  T
Q  185 tcgcctcgcgagtacaaccag 205  Q
    ||||||| |||| || |||||    
T  5596 tcgcctcacgagcactaccag 5616  T

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Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 78623 - 78511
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatca-gagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtact 183  Q
    ||||||||||| ||||||||| ||||||||||   | ||  | |||||||||||| |||||||||||| ||  ||||||||||||||||||||||| |||    
T  78623 catacctagtaatgattaggattgaatgtagggcaaagattggacccagaacaactttagtttgggaaatgtttggtactcgccatggcgagtaagaact 78524  T
Q  184 ctcgcctcgcgag 196  Q
    |||||||||||||    
T  78523 ctcgcctcgcgag 78511  T

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Target: scaffold0004; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 58116 - 58227
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  58116 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 58215  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  58216 tcgcctcgcgag 58227  T

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Target: scaffold0144 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 32050 - 32121
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||||||||||||||||| ||  ||||||||||||| ||||||||||||||| ||||||||||||||||    
T  32050 gaacccagaacaaccttagttgggagattgagtggtacttgccatggcgagtaagaactctcgcctcgcgag 32121  T

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Target: scaffold0009 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 74404 - 74293
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||    |||||||||||| |||||||||||||||  | ||||||||||||||||| ||| || |    
T  74404 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccc 74305  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  74304 tcgcctcgcgag 74293  T

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Target: scaffold0138 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 29905 - 30016
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaa-ttgagtggtactcgccatggcgagtaagtact 183  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||||| ||| |||||||| |||  | |||||||||||||||||||  ||||    
T  29905 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacatta-tttgggaagttggcttgtactcgccatggcgagtagatact 30003  T
Q  184 ctcgcctcgcgag 196  Q
    |||||||||||||    
T  30004 ctcgcctcgcgag 30016  T

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Target: scaffold0138; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 41901 - 41933
Alignment:
Q  85 catacctagtattgattaggaatgaatgtagga 117  Q
    ||||||||||| |||||||||||||||||||||    
T  41901 catacctagtaatgattaggaatgaatgtagga 41933  T

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Target: scaffold0780 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 522 - 411
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| ||||||||||||| |||   ||||||||||| | ||||||||| | |||  | ||||||||||||||||||||| | ||    
T  522 catacctagtaatgattaggtatgaatgtaggattagattaaacccagaacatcattagtttggaacttgtcttgtactcgccatggcgagtaagaattc 423  T
Q  185 tcgcctcgcgag 196  Q
    ||||||| ||||    
T  422 tcgcctcacgag 411  T

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Target: scaffold0010 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 242465 - 242354
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||||||||||||||||||   |||  ||||| |||||||| |||||| || | |||  | |||||||||||||||||||  |||||    
T  242465 catacctagtaatgattaggaatgaatgtagggcaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 242366  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  242365 tcgcctcgcgag 242354  T

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Target: scaffold0256 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 24673 - 24782
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| ||||| |||||||||||||||  |||  ||||| |||| ||| |||||| |||| |||  | ||||||||||||| ||||| ||||||    
T  24673 catacctagtaatgattgggaatgaatgtaggacaagattgaacctagaataacattagttggggagttggcttgtactcgccatggtgagtaggtactc 24772  T
Q  185 tcgcctcgcg 194  Q
    ||||||||||    
T  24773 tcgcctcgcg 24782  T

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Target: scaffold0553 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 9157 - 9086
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  9157 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 9086  T

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Target: scaffold0126 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 3816 - 3887
Alignment:
Q  125 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| || ||||||||||||||||    
T  3816 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 3887  T

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Target: scaffold0051 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 37115 - 37004
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| |||||||||||   |||  |||||||||||| | |||| |||| | |||| | ||||||||| ||||||||| | ||||    
T  37115 catacctagtaatgattagggatgaatgtagggcaagattgaacccagaacagcattagcttggaacttgacttgtactcgccttggcgagtaggaactc 37016  T
Q  185 tcgcctcgcgag 196  Q
    ||||||||||||    
T  37015 tcgcctcgcgag 37004  T

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Target: scaffold0370 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 17430 - 17512
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgcc 167  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| |||||| | ||||||||| |||||| |||||||||||    
T  17430 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaccattagtttggaaattgactggtactcgcc 17512  T

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Target: scaffold0133 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 22572 - 22501
Alignment:
Q  125 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  22572 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 22501  T

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Target: scaffold0055 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 61212 - 61180
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatc 119  Q
    |||||||||||||||||||||||||||||||||    
T  61212 tacctagtattgattaggaatgaatgtaggatc 61180  T

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Target: scaffold0149 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 4089 - 4052
Alignment:
Q  159 gtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    |||||||||||||||||||| | |||||||||||||||    
T  4089 gtactcgccatggcgagtaaatgctctcgcctcgcgag 4052  T

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Target: scaffold0149; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 8520 - 8483
Alignment:
Q  159 gtactcgccatggcgagtaagtactctcgcctcgcgag 196  Q
    |||||||||||||||||||| | |||||||||||||||    
T  8520 gtactcgccatggcgagtaaatgctctcgcctcgcgag 8483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 190
Target Start/End: Original strand, 14691 - 14796
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtactc 184  Q
    ||||||||||| |||||||| |  ||| |||||  |||   ||||||||||| | ||||||||| | |||  | |||||||||||||||||||||  |||    
T  14691 catacctagtaatgattagggaaaaatataggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagagctc 14790  T
Q  185 tcgcct 190  Q
    ||||||    
T  14791 tcgcct 14796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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