View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1318_high_151 (Length: 214)
Name: NF1318_high_151
Description: NF1318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1318_high_151 |
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Alignment Details
Target: chr3 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 28295142 - 28295328
Alignment:
| Q |
1 |
aaggtatcagtaatcagcataagcaca--aaattatatatattcacatacaaatgacaaaacaacgaactataagctaaccaattgcatatacgtcttaa |
98 |
Q |
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| T |
28295142 |
aaggtatcagtaatcagcataagcacacaaaattatatatattcacatacaaatgacaaaacaacgaactataagctaaccaattgcatatacgtcttaa |
28295241 |
T |
|
| Q |
99 |
attttaaatcgttttattgttattaagatctgtctttttgaccttatcgggagcaaaagttaattatgtattgttcaatatttgaaa |
185 |
Q |
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| T |
28295242 |
attttaaatcgttttattgttattaagatctgtctttttgaccttatcgggagcaaaagttaattatgtattgttcaatatttgaaa |
28295328 |
T |
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