View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1318_high_57 (Length: 385)
Name: NF1318_high_57
Description: NF1318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1318_high_57 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 333; Significance: 0; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 30 - 378
Target Start/End: Original strand, 3300919 - 3301266
Alignment:
| Q |
30 |
cttcaaagggctaaaacgttcaaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgccca |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3300919 |
cttcaaagggctaaaacgttcaaataccttgttgcagcaa-aaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgccca |
3301017 |
T |
|
| Q |
130 |
tcctttgaaataccggcttcaaaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaat |
229 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3301018 |
tcctttgatataccggcttcaaaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaat |
3301117 |
T |
|
| Q |
230 |
ccctgtgtccgggggcatcaatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagcctt |
329 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
3301118 |
ccctgtgtccgggggcatcaatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacattcagcctt |
3301217 |
T |
|
| Q |
330 |
gagcttgtcgagcacccaagcatacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3301218 |
gagcttgtcgagcacccaagcatacttgaatgaacgcttgttcatctca |
3301266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 51 - 378
Target Start/End: Original strand, 43045203 - 43045530
Alignment:
| Q |
51 |
aaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
150 |
Q |
| |
|
||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
43045203 |
aaataccttgttgcaacagcagatcatttgcttcacaccaagagtgaaagcaaggagagcatgttcacgggtctgaccatccttagaaataccggcttca |
43045302 |
T |
|
| Q |
151 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
250 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
43045303 |
aaaccaccagtagtggaatcaatgatgagaacggcacaatcagcttgggatgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcga |
43045402 |
T |
|
| Q |
251 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagc |
350 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| || |
|
|
| T |
43045403 |
tgacagtgcagtagtacttggttgtctcaaacttccagagagcaatgtcaatggtgatacctctttcacgttcagccttgagcttgtcaaggacccaggc |
43045502 |
T |
|
| Q |
351 |
atacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
43045503 |
atacttgaatgaacgcttgttcatctca |
43045530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 51 - 378
Target Start/End: Original strand, 43045656 - 43045983
Alignment:
| Q |
51 |
aaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
150 |
Q |
| |
|
||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
43045656 |
aaataccttgttgcaacagcagatcatttgcttcacaccaagagtgaaagcaaggagagcatgttcacgggtctgaccatccttagaaataccggcttca |
43045755 |
T |
|
| Q |
151 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
250 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
43045756 |
aaaccaccagtagtggaatcaatgatgagaacggcacaatcagcttgggatgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcga |
43045855 |
T |
|
| Q |
251 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagc |
350 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| || |
|
|
| T |
43045856 |
tgacagtgcagtagtacttggttgtctcaaacttccagagagcaatgtcaatggtgatacctctttcacgttcagccttgagcttgtcaaggacccaggc |
43045955 |
T |
|
| Q |
351 |
atacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
43045956 |
atacttgaatgaacgcttgttcatctca |
43045983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 51 - 378
Target Start/End: Complemental strand, 43066751 - 43066424
Alignment:
| Q |
51 |
aaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
150 |
Q |
| |
|
||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
43066751 |
aaataccttgttgcaacagcagatcatttgcttcacaccaagagtgaaagcaaggagagcatgttcacgggtctgaccatccttagaaataccggcttca |
43066652 |
T |
|
| Q |
151 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
250 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
43066651 |
aaaccaccagtagtggaatcaatgatgagaacggcacaatcagcttgggatgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcga |
43066552 |
T |
|
| Q |
251 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagc |
350 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| || |
|
|
| T |
43066551 |
tgacagtgcagtagtacttggttgtctcaaacttccagagagcaatgtcaatggtgatacctctttcacgttcagccttgagcttgtcaagaacccaggc |
43066452 |
T |
|
| Q |
351 |
atacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
43066451 |
atacttgaatgaacgcttgttcatctca |
43066424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 51 - 378
Target Start/End: Original strand, 43084084 - 43084411
Alignment:
| Q |
51 |
aaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
150 |
Q |
| |
|
||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
43084084 |
aaataccttgttgcaacagcagatcatttgcttcacaccaagagtgaaagcaaggagagcatgttcacgggtctgaccatccttagaaataccggcttca |
43084183 |
T |
|
| Q |
151 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
250 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
43084184 |
aaaccaccagtagtggaatcaatgatgagaacggcacaatcagcttgggatgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcga |
43084283 |
T |
|
| Q |
251 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagc |
350 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| || |
|
|
| T |
43084284 |
tgacagtgcagtagtacttggttgtctcaaacttccagagagcaatgtcaatggtgatacctctttcacgttcagccttgagcttgtcaaggacccaggc |
43084383 |
T |
|
| Q |
351 |
atacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
43084384 |
atacttgaatgaacgcttgttcatctca |
43084411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 51 - 378
Target Start/End: Complemental strand, 45993568 - 45993241
Alignment:
| Q |
51 |
aaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
150 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
45993568 |
aaataccttgttgcagcaacagatcatttgattcacaccaagagtgaaggcaagaagagcatgttcacgagtctgaccatcctttgaaataccggcttca |
45993469 |
T |
|
| Q |
151 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
250 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||||||||||| || || || ||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
45993468 |
aaaccacgagtagtggaatcaatgatgagaacagcacaatcagcttgggacgtcccggtgatcatgttcttaatgaaatccctgtgtccggaggcatcaa |
45993369 |
T |
|
| Q |
251 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagc |
350 |
Q |
| |
|
||||||||||| |||||| | |||||||||||| ||| || | ||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| |
|
|
| T |
45993368 |
tgacagtgcagctgtacttgtttgtctcaaacttcgacaaagaactgtcaattgtgatacctctttcacgctcagtcttgagcttgtcaagcacccaagc |
45993269 |
T |
|
| Q |
351 |
atacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
||||||||||||||||||| |||||||| |
|
|
| T |
45993268 |
atacttgaatgaacgcttgatcatctca |
45993241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 51 - 376
Target Start/End: Complemental strand, 45983782 - 45983463
Alignment:
| Q |
51 |
aaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
150 |
Q |
| |
|
|||||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||| |||||||||||||| |||| | |||||||||||| |
|
|
| T |
45983782 |
aaataccttgttgcagcagcagatcatttgattcacaccaagagtgaaggcaagaagagcatgttcacgggtctgaccattc------ataccggcttca |
45983689 |
T |
|
| Q |
151 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
250 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45983688 |
aaaccaccagtagtggaatcaatgacgagaacagcacagtcagcttgggacgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
45983589 |
T |
|
| Q |
251 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagc |
350 |
Q |
| |
|
|||||||||||| |||||| | |||||||||||| |||| | |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
45983588 |
tgacagtgcagttgtacttgtttgtctcaaacttcgacagggtaatgtcaattgtaacacctctttcacgttcagccttgagcttgtcaagcacccaagc |
45983489 |
T |
|
| Q |
351 |
atacttgaatgaacgcttgttcatct |
376 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
45983488 |
atacttgaatgaacgcttgttcatct |
45983463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 51 - 378
Target Start/End: Complemental strand, 38137936 - 38137609
Alignment:
| Q |
51 |
aaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
150 |
Q |
| |
|
|||||||||||||||||| || |||||||| |||||||||| ||| ||||||||||| |||||| |||||| || |||| ||| ||| |||||| |
|
|
| T |
38137936 |
aaataccttgttgcagcagcagatcatttggcgcacaccaagaacgaatgcaagaagagcatgttcagaggtctgaccttcctgagaataaccagcttca |
38137837 |
T |
|
| Q |
151 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
250 |
Q |
| |
|
|||| ||| || ||||||||||||| ||||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38137836 |
aaactaccagttgtggaatcaatgacgagaacagcacagtcagcttgggacgtcccggtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
38137737 |
T |
|
| Q |
251 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagc |
350 |
Q |
| |
|
||| ||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
38137736 |
tgagagtgcagtagtacttggtagtctcaaactttgacagagaaatgtcaatagtgatacctctttcacgctcggccttgagcttgtcgagcacccaagc |
38137637 |
T |
|
| Q |
351 |
atacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
||||||||| || ||||||| |||||| |
|
|
| T |
38137636 |
atacttgaacgatggcttgtttatctca |
38137609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 57 - 378
Target Start/End: Complemental strand, 7888849 - 7888528
Alignment:
| Q |
57 |
cttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaaaacca |
156 |
Q |
| |
|
|||||||||||| || ||||||| | ||||| |||| ||| ||||| || | |||||| |||||| |||||||| ||| |||||||||||||||| |
|
|
| T |
7888849 |
cttgttgcagcagcagatcattttttaaacaccgagagcgaaggcaagttgaacatgttcagtggtctgaccatccttacaaaaaccggcttcaaaacca |
7888750 |
T |
|
| Q |
157 |
ccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacag |
256 |
Q |
| |
|
|| || |||||||||||||| ||||||||||||||||||| || | || || ||||||||||| ||||||||||||||||||||||||||||||| || |
|
|
| T |
7888749 |
ccagttgtggaatcaatgatgagaacagcacaatcagcttcagacgccccggtgatcatgttcttgatgaaatccctgtgtccgggggcatcaatgagag |
7888650 |
T |
|
| Q |
257 |
tgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagcatactt |
356 |
Q |
| |
|
||||| |||| | || |||| ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
7888649 |
tgcagcagtagctggttgtctgaaacttccaaagagaaatgtcaattgtgatacctctttcacgctcagccttgagtttgtcaagcacccaagcatactt |
7888550 |
T |
|
| Q |
357 |
gaatgaacgcttgttcatctca |
378 |
Q |
| |
|
|||| |||| |||| |||||| |
|
|
| T |
7888549 |
gaataaacgtctgtttatctca |
7888528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 85 - 378
Target Start/End: Complemental strand, 7891086 - 7890793
Alignment:
| Q |
85 |
acaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaaaaccaccggtagtggaatcaatgatcagaacag |
184 |
Q |
| |
|
|||||||||| ||| ||||| || | |||||| |||||| |||| ||| ||| ||| || ||||||||||| || ||||||||||| ||||||| |
|
|
| T |
7891086 |
acaccaagagcgaatgcaagttgaacatgttcagtggtctgaccattcttacaaaaaccagcgtcaaaaccaccaagtgtagaatcaatgataagaacag |
7890987 |
T |
|
| Q |
185 |
cacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttagtagtctcaaactt |
284 |
Q |
| |
|
|||| ||||||| ||| | |||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||| | | || || ||||||||||| |
|
|
| T |
7890986 |
cacagtcagcttcggacgctccagtgatcatgttcttaatgaaatccctgtgtccaggggcatcaatgagagtgcagcggaagttggttgtctcaaactt |
7890887 |
T |
|
| Q |
285 |
ccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagcatacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
7890886 |
ccacagagaaatgtcaattgtgatacctctttcacgctcggccttgagcttgtcaagcacccaagcatacttgaatgaatgcctgttcatctca |
7890793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 51 - 378
Target Start/End: Complemental strand, 40034768 - 40034449
Alignment:
| Q |
51 |
aaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
150 |
Q |
| |
|
|||||||||||||||||| || |||||||| |||||||||||||| | ||||||||||| |||||| |||||| |||| ||| |||| | ||| |
|
|
| T |
40034768 |
aaataccttgttgcagcagcagatcatttgattcacaccaagagtataggcaagaagagcatgttcagtggtctgaccat----tga--taccagtctca |
40034675 |
T |
|
| Q |
151 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
250 |
Q |
| |
|
|||| ||| || ||||||||||||| ||||||||||| |||||| |||| || || || | ||||||||| |||||||| ||||||||||||| |||| |
|
|
| T |
40034674 |
aaactaccagttctggaatcaatgatgagaacagcacagtcagctagggacgtgccggttaacatgttcttgatgaaatc--tgtgtccgggggcgtcaa |
40034577 |
T |
|
| Q |
251 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagc |
350 |
Q |
| |
|
||| |||||||| ||| || || ||||||||||| ||| | ||| |||||||| | |||||||||||| ||||||||||||||||| || |||||||| |
|
|
| T |
40034576 |
tgagagtgcagtggtatttggttgtctcaaacttggacatggaaatatcaattgtaacacctctttcacgctcagccttgagcttgtcaagtacccaagc |
40034477 |
T |
|
| Q |
351 |
atacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
|||||||||||| ||||||||||||||| |
|
|
| T |
40034476 |
atacttgaatgagcgcttgttcatctca |
40034449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 112 - 378
Target Start/End: Original strand, 51291886 - 51292151
Alignment:
| Q |
112 |
tgttcacgggtctgcccatcctttgaaataccggcttcaaaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaa |
211 |
Q |
| |
|
||||||| |||||| |||||||| ||| ||| |||||||| || || || |||||||||| ||| |||| | |||| ||||||||| | | || | | |
|
|
| T |
51291886 |
tgttcaccggtctgaccatccttagaataaccagcttcaaacccgccagttgtggaatcaaggatgagaataacacagtcagcttggaacggcccggcga |
51291985 |
T |
|
| Q |
212 |
tcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacc |
311 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||||||||| |||||| |||||||| | || |||||||| | |||| |||||||||||||||||| |
|
|
| T |
51291986 |
tcatgttcttaatgaaattcccatgtccgggggcatcaatgagagtgcaatagtacttgattgt-tcaaacttggatagagaaatgtcaattgtgatacc |
51292084 |
T |
|
| Q |
312 |
tctttcacgttcagccttgagcttgtcgagcacccaagcatacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
||||||||| |||||||||| |||||| ||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
51292085 |
tctttcacgctcagccttgaacttgtcaagcacccaagcatacgtgaatgaacgcatgttcatctca |
51292151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 169 - 363
Target Start/End: Complemental strand, 43076746 - 43076553
Alignment:
| Q |
169 |
tcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtact |
268 |
Q |
| |
|
|||| ||| |||| |||||||||||||||||| || ||||| ||||||||||||||||||| | ||||||| ||| ||||||||||| |||| ||| || |
|
|
| T |
43076746 |
tcaaggataagaagagcacaatcagcttgggacgtcccagtgatcatgttcttaatgaaattcttgtgtcccgggacatcaatgacaacgcagcagttct |
43076647 |
T |
|
| Q |
269 |
tagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagcatacttgaatgaa |
363 |
Q |
| |
|
| || |||||||||||||| |||| ||| ||||| || ||||||||||||||||||||| |||||||||| || | ||| |||||||||| |||| |
|
|
| T |
43076646 |
ttgttgtctcaaacttccagagagaaatctcaatggt-atacctctttcacgttcagccctgagcttgtcaaggatccaggcatacttgactgaa |
43076553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 47 - 378
Target Start/End: Original strand, 4231672 - 4232003
Alignment:
| Q |
47 |
gttcaaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggc |
146 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||||| |||||||| ||||| |||||||| |||||||| || |
|
|
| T |
4231672 |
gttcaaataccttgttgcagcagcagatcatttgcctcacaccaagagtgaaagcaaggagagcatgttcacgagtctgaccatccttggaaataccagc |
4231771 |
T |
|
| Q |
147 |
ttcaaaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggca |
246 |
Q |
| |
|
|||||||||||| || |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4231772 |
ttcaaaaccaccagtggtggaatcaatgatgagaacagcacaatcagcttgggatgtaccagtaatcatgttcttaatgaaatccctgtgtccaggggca |
4231871 |
T |
|
| Q |
247 |
tcaatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcaccc |
346 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| |
|
|
| T |
4231872 |
tcaatgacagtgcagtagtacttagtggtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgctcagccttgagcttgtcaagaaccc |
4231971 |
T |
|
| Q |
347 |
aagcatacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |
|
|
| T |
4231972 |
aagcatacttaaatgaacgcttgttcatctca |
4232003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 160; Significance: 4e-85; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 52 - 359
Target Start/End: Original strand, 16349349 - 16349656
Alignment:
| Q |
52 |
aataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaa |
151 |
Q |
| |
|
||||||||||||||||| || ||||||||||| |||||||||| | ||||| | ||||| ||||||||| |||| |||| || |||||||||||| ||| |
|
|
| T |
16349349 |
aataccttgttgcagcagcagatcatttgcttgacaccaagagagtaagcatggagagcatgttcacggatctgaccattattggaaataccggctccaa |
16349448 |
T |
|
| Q |
152 |
aaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaat |
251 |
Q |
| |
|
||||| | | ||||||||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16349449 |
aaccagcaggagtggaatcaacgataagaagagcacaatcagcttgggatgtcccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaat |
16349548 |
T |
|
| Q |
252 |
gacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagca |
351 |
Q |
| |
|
|| ||||||| |||||| || |||||||| ||| ||| || | |||||||||||||||||||||| || ||||||||||| ||||| || ||||| ||| |
|
|
| T |
16349549 |
gatagtgcagcggtacttggttgtctcaaaattcaacatagaattgtcaattgtgatacctctttcgcgctcagccttgagtttgtcaagaacccacgca |
16349648 |
T |
|
| Q |
352 |
tacttgaa |
359 |
Q |
| |
|
|||||||| |
|
|
| T |
16349649 |
tacttgaa |
16349656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 157; Significance: 2e-83; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 54 - 378
Target Start/End: Complemental strand, 7529163 - 7528839
Alignment:
| Q |
54 |
taccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaaaa |
153 |
Q |
| |
|
||||||||| || ||||| ||||| |||||||| |||||||| || |||||||||||||| ||||||||||| |||||||| || ||||| ||||||||| |
|
|
| T |
7529163 |
taccttgttacaacaacagatcatctgcttcactccaagagtaaatgcaagaagagcgtgctcacgggtctgtccatccttagagataccagcttcaaaa |
7529064 |
T |
|
| Q |
154 |
ccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatga |
253 |
Q |
| |
|
||||| || ||||| |||||||| || || ||||||||||| ||||| |||||||||||||||||||| |||||||| | |||||||| |||||||||| |
|
|
| T |
7529063 |
ccaccagtggtggagtcaatgataagcacggcacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatga |
7528964 |
T |
|
| Q |
254 |
cagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagcata |
353 |
Q |
| |
|
| |||||||||||||| || |||||||| ||||||| ||||| || || || || ||||||||||| |||||||| || ||||| || ||||| ||||| |
|
|
| T |
7528963 |
ctgtgcagtagtacttggtggtctcaaatttccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcata |
7528864 |
T |
|
| Q |
354 |
cttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
7528863 |
cttgaatgaacgcttgttcatctca |
7528839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 54 - 378
Target Start/End: Complemental strand, 7519792 - 7519468
Alignment:
| Q |
54 |
taccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaaaa |
153 |
Q |
| |
|
||||||||| || ||||| ||||| |||||||| |||||||| || ||||||||||| || ||||||||||| |||||||| || ||||| ||||||||| |
|
|
| T |
7519792 |
taccttgttacaacaacagatcatctgcttcactccaagagtaaatgcaagaagagcatgctcacgggtctgtccatccttagagataccagcttcaaaa |
7519693 |
T |
|
| Q |
154 |
ccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatga |
253 |
Q |
| |
|
||||| || ||||| |||||||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||| | |||||||| |||||||||| |
|
|
| T |
7519692 |
ccaccagtggtggagtcaatgataaggacagcacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatga |
7519593 |
T |
|
| Q |
254 |
cagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagcata |
353 |
Q |
| |
|
| |||||||||||||| || |||||||| ||||||| |||||| ||||| || || ||||||||||| |||||||| |||||||| || ||||| || || |
|
|
| T |
7519592 |
ctgtgcagtagtacttggtggtctcaaatttccacaaagcaatatcaatggtaattcctctttcacgctcagccttaagcttgtcaagaacccatgcgta |
7519493 |
T |
|
| Q |
354 |
cttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
|||||| || | ||||||||||||| |
|
|
| T |
7519492 |
cttgaaagacctcttgttcatctca |
7519468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 51 - 378
Target Start/End: Original strand, 34691036 - 34691361
Alignment:
| Q |
51 |
aaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
150 |
Q |
| |
|
|||||||||||||||||| || ||||||||| |||||||||||||||| ||||||||||| ||||| | |||||| |||| ||| || ||| ||| |
|
|
| T |
34691036 |
aaataccttgttgcagcagcagatcatttgcctcacaccaagagtgaaggcaagaagagcatgttcccaggtctgaccattcttagaccaaccagctcgc |
34691135 |
T |
|
| Q |
151 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
250 |
Q |
| |
|
||||| | ||||| |||||||||| ||||||||||| ||||||||||| || || || |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
34691136 |
aaacctctagtagtcgaatcaatgacgagaacagcacagtcagcttgggaggtcccggtgatcatgttcttaatgaaatccctgtgtccgggagcatcaa |
34691235 |
T |
|
| Q |
251 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagc |
350 |
Q |
| |
|
||| |||| || ||||||| || ||||||||||| || ||| ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |
|
|
| T |
34691236 |
tgagagtgaagcagtacttggttgtctcaaacttgcataga--aatgtcaattgtgatacctctttcacgctcagcgttgagcttgtcaagcacccaagc |
34691333 |
T |
|
| Q |
351 |
atacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
|||||||||||||||||| ||||||||| |
|
|
| T |
34691334 |
atacttgaatgaacgcttcttcatctca |
34691361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 51 - 378
Target Start/End: Original strand, 34713448 - 34713773
Alignment:
| Q |
51 |
aaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
150 |
Q |
| |
|
|||||||||||||||||| || ||||||||| |||||||||||||||| ||||||||||| ||||| | |||||| |||| ||| || ||| ||| |
|
|
| T |
34713448 |
aaataccttgttgcagcagcagatcatttgcctcacaccaagagtgaaggcaagaagagcatgttcccaggtctgaccattcttagaccaaccagctcgc |
34713547 |
T |
|
| Q |
151 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
250 |
Q |
| |
|
||||| | ||||| |||||||||| ||||||||||| ||||||||||| || || || |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
34713548 |
aaacctctagtagtcgaatcaatgacgagaacagcacagtcagcttgggaggtcccggtgatcatgttcttaatgaaatccctgtgtccgggagcatcaa |
34713647 |
T |
|
| Q |
251 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagc |
350 |
Q |
| |
|
||| |||| || ||||||| || ||||||||||| || ||| ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |
|
|
| T |
34713648 |
tgagagtgaagcagtacttggttgtctcaaacttgcataga--aatgtcaattgtgatacctctttcacgctcagcgttgagcttgtcaagcacccaagc |
34713745 |
T |
|
| Q |
351 |
atacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
|||||||||||||||||| ||||||||| |
|
|
| T |
34713746 |
atacttgaatgaacgcttcttcatctca |
34713773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 52 - 378
Target Start/End: Original strand, 16232380 - 16232710
Alignment:
| Q |
52 |
aataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaa |
151 |
Q |
| |
|
||||||||||||||||| || ||||||||| |||||||||||||| | ||||| ||||| ||||| | |||||| |||||||| || ||| |||| | |
|
|
| T |
16232380 |
aataccttgttgcagcagcagatcatttgcctcacaccaagagtgtacgcaagtagagcatgttcccaggtctgaccatccttagaccaaccagcttgca |
16232479 |
T |
|
| Q |
152 |
aaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaa----tgaaatccctgtgtccgggggcat |
247 |
Q |
| |
|
|||| |||||||||| |||| ||||||||||| ||||||| ||| || || | ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
16232480 |
aaccgagagtagtggaattgatgactagaacagcacagtcagcttcggaggtcccgatgatcatgttcttaattaatgaaatccctgtgtccgggggcat |
16232579 |
T |
|
| Q |
248 |
caatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcaccca |
347 |
Q |
| |
|
|||||| ||||| ||||||| || ||||||||||| |||| | ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
16232580 |
caatgagggtgcaacagtacttggttgtctcaaacttgcacatggaaatgtcaattgtgatacctctttcacgctcagccttgagcttgtcaagcaccca |
16232679 |
T |
|
| Q |
348 |
agcatacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
||||||||||||||||||| | ||||||||| |
|
|
| T |
16232680 |
agcatacttgaatgaacgcatcttcatctca |
16232710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 51 - 370
Target Start/End: Original strand, 33861045 - 33861367
Alignment:
| Q |
51 |
aaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
150 |
Q |
| |
|
||||||||||||| ||| || |||||||| ||||||||||||| | || ||||| || |||||||||||||| |||| ||| |||| ||| ||||| |
|
|
| T |
33861045 |
aaataccttgttgatgcagcagatcatttgaggcacaccaagagtgcaggcgagaagggcatgttcacgggtctgaccatgcttagaaaaaccaacttca |
33861144 |
T |
|
| Q |
151 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
250 |
Q |
| |
|
|||||||| | || |||||||| ||| |||| ||| |||||||| | |||||| ||| |||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
33861145 |
aaaccaccaggagaggaatcaacgataagaagagcgcaatcagcataggatgtcccattaatcatgttcttaatataatccctgtgtccaggggcatcaa |
33861244 |
T |
|
| Q |
251 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcaccca--- |
347 |
Q |
| |
|
|||||||| | ||||| | |||||||| || | || || || |||||| | ||||||||||||||| ||||||| ||||||||| || ||||| |
|
|
| T |
33861245 |
tgacagtgtaccggtactggtttgtctcaaaattacgcatagaaacgtcaatggagatacctctttcacgctcagcctcgagcttgtcaagaacccaatt |
33861344 |
T |
|
| Q |
348 |
agcatacttgaatgaacgcttgt |
370 |
Q |
| |
|
||||||||||||||||| ||||| |
|
|
| T |
33861345 |
agcatacttgaatgaacacttgt |
33861367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 133; Significance: 5e-69; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 178 - 378
Target Start/End: Original strand, 4620026 - 4620226
Alignment:
| Q |
178 |
agaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttagtagtct |
277 |
Q |
| |
|
||||||||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| || |||| |
|
|
| T |
4620026 |
agaacagcacagtcagcttgggatgttccggtgatcatgttcttaatgaaatctctgtgtccgggggcatcaatgagagtgcagtagtacttggttgtct |
4620125 |
T |
|
| Q |
278 |
caaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcacccaagcatacttgaatgaacgcttgttcatctc |
377 |
Q |
| |
|
||||||| |||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| | |||| ||||| |
|
|
| T |
4620126 |
caaacttggacagagaaatgtcgattgtgatacctctttcacgctcagccttgagcttgtcaagcacccaagcatatttgaatgaacacatgtttatctc |
4620225 |
T |
|
| Q |
378 |
a |
378 |
Q |
| |
|
| |
|
|
| T |
4620226 |
a |
4620226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 120 - 378
Target Start/End: Original strand, 1846670 - 1846928
Alignment:
| Q |
120 |
ggtctgcccatcctttgaaataccggcttcaaaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttc |
219 |
Q |
| |
|
|||||| |||| ||| ||| ||| |||||||||||||| | || || |||||||| ||||| ||||| ||||||| ||||| ||| || ||||||||| |
|
|
| T |
1846670 |
ggtctgaccattcttacaaaaaccagcttcaaaaccaccaggtgtagagtcaatgataagaacggcacagtcagcttcggatgctccggtgatcatgttc |
1846769 |
T |
|
| Q |
220 |
ttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcac |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| | | || || |||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
1846770 |
ttaatgaaatccctgtgtccgggggcatcaatgagagtgcagaggaagttggttgtctcaaacttccatagagaaatgtcaattgtgatacctctttcac |
1846869 |
T |
|
| Q |
320 |
gttcagccttgagcttgtcgagcacccaagcatacttgaatgaacgcttgttcatctca |
378 |
Q |
| |
|
| || |||||||||||||| ||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
1846870 |
gctcggccttgagcttgtcaagcacccaagcatacttgaatgaacgcctgtttatctca |
1846928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 50 - 359
Target Start/End: Original strand, 4297684 - 4297990
Alignment:
| Q |
50 |
caaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttc |
149 |
Q |
| |
|
||||||||||||||||||| || || ||||| ||| |||||||| |||| ||||||||||| |||||| |||||| ||| | ||||||||||| |
|
|
| T |
4297684 |
caaataccttgttgcagcagcagataatttgattcgcaccaagattgaaggcaagaagagcatgttcaaaggtctgaccaatc------ataccggcttc |
4297777 |
T |
|
| Q |
150 |
aaaaccaccggtag---tggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggca |
246 |
Q |
| |
|
||||||||| |||| |||||||||||| |||||| |||| | |||| |||| | |||||| |||||||||||||| | ||||| |||||||||||| |
|
|
| T |
4297778 |
aaaaccaccagtagtagtggaatcaatgacgagaacatcacagttagctagggacgctccagtggtcatgttcttaatgcattccctatgtccgggggca |
4297877 |
T |
|
| Q |
247 |
tcaatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatacctctttcacgttcagccttgagcttgtcgagcaccc |
346 |
Q |
| |
|
||||||||| |||||| |||||| | ||||||||||| |||||| ||||||||||||| |||||||||| | ||||| ||||| ||||| || |||| |
|
|
| T |
4297878 |
tcaatgacaatgcagttgtacttgtttgtctcaaacttggacagagaaatgtcaattgtggcacctctttcatggtcagctttgagtttgtcaagtaccc |
4297977 |
T |
|
| Q |
347 |
aagcatacttgaa |
359 |
Q |
| |
|
||||||||||||| |
|
|
| T |
4297978 |
aagcatacttgaa |
4297990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 211 - 363
Target Start/End: Complemental strand, 4787426 - 4787274
Alignment:
| Q |
211 |
atcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtgatac |
310 |
Q |
| |
|
||||||||| ||||| | |||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| ||| || ||||||||||||| || |
|
|
| T |
4787426 |
atcatgttcctaatgtattccctgtgtccgggagcatcaatgacagtgcagttgtacttgtttgtctcaaacttggacatagaaatgtcaattgtggcac |
4787327 |
T |
|
| Q |
311 |
ctctttcacgttcagccttgagcttgtcgagcacccaagcatacttgaatgaa |
363 |
Q |
| |
|
|||||||||| ||| ||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
4787326 |
ctctttcacgctcacccttgagtttgtcaagcacccaagcatacttgaatgaa |
4787274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 4787536 - 4787429
Alignment:
| Q |
51 |
aaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
150 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||||||||| |||||| ||||||||||| |||||| ||||||| |||| | |||||||||||| |
|
|
| T |
4787536 |
aaataccttgttgcagcagcagatcatttgcttcacaccaacagtgaaggcaagaagagcatgttcaagggtctgaccattc------ataccggcttca |
4787443 |
T |
|
| Q |
151 |
aaaccaccggtagt |
164 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
4787442 |
aaaccaccagtagt |
4787429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 4619893 - 4619959
Alignment:
| Q |
51 |
aaataccttgttgcagcaacaaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttca |
117 |
Q |
| |
|
||||||||||||| |||| || |||||||||||||||||||| || |||||||| | ||| |||||| |
|
|
| T |
4619893 |
aaataccttgttgtagcagcagatcatttgcttcacaccaagggttaaagcaaggacagcatgttca |
4619959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 39242214 - 39242152
Alignment:
| Q |
245 |
catcaatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtga |
307 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| |
|
|
| T |
39242214 |
catcaatgacagtgcagtagtactttgttgtctcaaacttggacagagcaatgtcaattgtga |
39242152 |
T |
|
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