View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1318_low_132 (Length: 256)

Name: NF1318_low_132
Description: NF1318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1318_low_132
NF1318_low_132
[»] scaffold0028 (5 HSPs)
scaffold0028 (85-238)||(67763-67916)
scaffold0028 (85-238)||(57299-57452)
scaffold0028 (85-238)||(41792-41945)
scaffold0028 (87-179)||(7318-7410)
scaffold0028 (85-165)||(23363-23443)
[»] chr7 (48 HSPs)
chr7 (85-238)||(60374-60527)
chr7 (85-234)||(14337629-14337778)
chr7 (85-234)||(14331045-14331194)
chr7 (85-238)||(40523059-40523212)
chr7 (85-238)||(9510710-9510863)
chr7 (85-238)||(15155867-15156020)
chr7 (85-238)||(18164371-18164524)
chr7 (85-238)||(13684717-13684870)
chr7 (85-238)||(13691332-13691485)
chr7 (85-238)||(15162518-15162671)
chr7 (85-238)||(16406992-16407145)
chr7 (87-238)||(21937-22088)
chr7 (87-238)||(8201774-8201925)
chr7 (85-238)||(15022384-15022538)
chr7 (85-238)||(20702689-20702842)
chr7 (85-238)||(32767929-32768082)
chr7 (85-238)||(11366455-11366608)
chr7 (85-238)||(14655114-14655267)
chr7 (85-238)||(18176359-18176512)
chr7 (85-238)||(18183031-18183184)
chr7 (85-180)||(12703085-12703180)
chr7 (85-206)||(44786172-44786293)
chr7 (85-206)||(44792813-44792934)
chr7 (85-179)||(12704356-12704450)
chr7 (85-208)||(33392-33515)
chr7 (85-208)||(70463-70586)
chr7 (89-176)||(11238673-11238760)
chr7 (85-208)||(74571-74695)
chr7 (89-176)||(1347824-1347911)
chr7 (89-176)||(11231986-11232073)
chr7 (85-177)||(4318243-4318335)
chr7 (85-177)||(14148885-14148977)
chr7 (85-238)||(14953452-14953605)
chr7 (85-177)||(11262644-11262736)
chr7 (85-177)||(11547965-11548057)
chr7 (85-177)||(11554561-11554653)
chr7 (85-177)||(14959479-14959571)
chr7 (85-238)||(12692750-12692903)
chr7 (141-238)||(49051625-49051722)
chr7 (85-179)||(18531558-18531652)
chr7 (85-177)||(25038908-25039000)
chr7 (85-167)||(44408057-44408139)
chr7 (85-145)||(26420325-26420385)
chr7 (85-179)||(6016869-6016963)
chr7 (133-238)||(18585046-18585151)
chr7 (133-238)||(8706250-8706355)
chr7 (133-238)||(8719666-8719771)
chr7 (133-238)||(18553278-18553383)
[»] chr6 (50 HSPs)
chr6 (85-238)||(2869833-2869986)
chr6 (85-238)||(2876448-2876601)
chr6 (85-238)||(4233196-4233349)
chr6 (85-238)||(6980914-6981067)
chr6 (85-238)||(20649491-20649644)
chr6 (85-238)||(20060905-20061058)
chr6 (87-238)||(8229143-8229294)
chr6 (87-238)||(18931332-18931483)
chr6 (87-238)||(29587379-29587530)
chr6 (87-238)||(29593520-29593671)
chr6 (85-238)||(12762957-12763110)
chr6 (89-238)||(14059318-14059467)
chr6 (85-238)||(27327754-27327907)
chr6 (85-238)||(27388494-27388647)
chr6 (85-234)||(1538642-1538791)
chr6 (85-234)||(1544741-1544890)
chr6 (90-238)||(30597473-30597621)
chr6 (87-238)||(30637830-30637980)
chr6 (85-238)||(18194222-18194375)
chr6 (89-238)||(30694618-30694767)
chr6 (85-176)||(26130786-26130877)
chr6 (85-238)||(17031126-17031279)
chr6 (125-238)||(8797446-8797559)
chr6 (125-238)||(27430021-27430134)
chr6 (85-238)||(28258152-28258304)
chr6 (85-238)||(28264776-28264928)
chr6 (85-238)||(28336901-28337053)
chr6 (85-238)||(28343525-28343677)
chr6 (125-238)||(20802012-20802124)
chr6 (85-177)||(22331756-22331848)
chr6 (85-238)||(17037033-17037186)
chr6 (85-177)||(19808843-19808935)
chr6 (85-177)||(16372175-16372267)
chr6 (85-179)||(34832969-34833063)
chr6 (85-238)||(34369671-34369824)
chr6 (142-238)||(28287612-28287707)
chr6 (85-179)||(3708180-3708274)
chr6 (85-179)||(14098941-14099035)
chr6 (125-238)||(28314827-28314940)
chr6 (85-179)||(25595050-25595144)
chr6 (125-238)||(27185965-27186078)
chr6 (125-238)||(27207801-27207914)
chr6 (125-238)||(27241314-27241427)
chr6 (125-238)||(27263162-27263275)
chr6 (85-138)||(31164544-31164597)
chr6 (85-154)||(34295765-34295834)
chr6 (133-238)||(32564988-32565093)
chr6 (80-116)||(4168302-4168338)
chr6 (80-116)||(4208982-4209018)
chr6 (85-117)||(22759227-22759259)
[»] chr5 (56 HSPs)
chr5 (85-238)||(24471945-24472098)
chr5 (85-238)||(27608994-27609147)
chr5 (85-238)||(14994733-14994886)
chr5 (85-238)||(27615600-27615753)
chr5 (85-238)||(27663487-27663640)
chr5 (85-238)||(27670127-27670280)
chr5 (85-238)||(41776071-41776224)
chr5 (85-238)||(15001376-15001529)
chr5 (85-238)||(17706628-17706781)
chr5 (89-238)||(22265200-22265349)
chr5 (85-238)||(41097920-41098073)
chr5 (85-238)||(41769497-41769650)
chr5 (85-238)||(1692134-1692287)
chr5 (85-238)||(22062579-22062732)
chr5 (87-238)||(16355100-16355251)
chr5 (87-238)||(16361759-16361910)
chr5 (87-238)||(34565093-34565244)
chr5 (87-238)||(34571748-34571899)
chr5 (85-238)||(18038365-18038518)
chr5 (85-238)||(23584395-23584548)
chr5 (85-238)||(27687026-27687179)
chr5 (85-238)||(37286478-37286631)
chr5 (85-238)||(37293181-37293334)
chr5 (90-238)||(23610157-23610305)
chr5 (90-238)||(23841553-23841701)
chr5 (87-238)||(25107039-25107190)
chr5 (87-238)||(25166132-25166283)
chr5 (85-238)||(25406680-25406833)
chr5 (85-238)||(34294250-34294403)
chr5 (85-238)||(22133253-22133406)
chr5 (85-238)||(22139945-22140098)
chr5 (89-238)||(41294136-41294285)
chr5 (89-236)||(22327865-22328012)
chr5 (85-238)||(22588349-22588502)
chr5 (85-238)||(17284321-17284474)
chr5 (89-238)||(19992138-19992287)
chr5 (85-206)||(40707408-40707529)
chr5 (85-206)||(40714050-40714171)
chr5 (89-236)||(22334519-22334666)
chr5 (85-238)||(29477652-29477805)
chr5 (85-238)||(29471057-29471210)
chr5 (85-208)||(15236478-15236601)
chr5 (89-206)||(27517039-27517155)
chr5 (89-206)||(27523676-27523792)
chr5 (85-238)||(37544296-37544450)
chr5 (125-238)||(33726114-33726227)
chr5 (85-238)||(21294961-21295114)
chr5 (85-238)||(25535243-25535396)
chr5 (85-177)||(14359517-14359609)
chr5 (85-177)||(23336986-23337078)
chr5 (86-177)||(24554849-24554940)
chr5 (85-177)||(15441652-15441744)
chr5 (85-179)||(22325624-22325718)
chr5 (1-31)||(1700671-1700701)
chr5 (133-238)||(21667552-21667657)
chr5 (133-238)||(29316673-29316778)
[»] chr4 (50 HSPs)
chr4 (85-234)||(8048194-8048343)
chr4 (85-234)||(8054807-8054956)
chr4 (85-238)||(19779988-19780141)
chr4 (85-238)||(4772351-4772504)
chr4 (85-238)||(17962023-17962176)
chr4 (85-238)||(22194874-22195027)
chr4 (85-238)||(36884433-36884586)
chr4 (85-238)||(15148710-15148863)
chr4 (85-238)||(15362387-15362540)
chr4 (85-238)||(15383192-15383345)
chr4 (85-238)||(20115397-20115550)
chr4 (87-238)||(29040599-29040750)
chr4 (85-238)||(7900869-7901022)
chr4 (85-238)||(12475274-12475427)
chr4 (85-238)||(12481904-12482057)
chr4 (85-238)||(16231540-16231693)
chr4 (85-238)||(18024126-18024279)
chr4 (85-238)||(23954402-23954555)
chr4 (85-238)||(23961064-23961217)
chr4 (87-238)||(8385089-8385240)
chr4 (87-238)||(8391744-8391895)
chr4 (87-238)||(14074085-14074236)
chr4 (87-238)||(15256863-15257014)
chr4 (87-238)||(17808668-17808819)
chr4 (85-238)||(15321792-15321945)
chr4 (85-238)||(51493516-51493669)
chr4 (87-238)||(17089678-17089829)
chr4 (85-238)||(40471729-40471882)
chr4 (85-238)||(6873074-6873227)
chr4 (85-238)||(14268156-14268309)
chr4 (85-238)||(26284606-26284759)
chr4 (85-238)||(40478402-40478555)
chr4 (85-238)||(14298526-14298679)
chr4 (85-206)||(18295912-18296033)
chr4 (85-208)||(17810557-17810680)
chr4 (85-179)||(14757120-14757214)
chr4 (85-238)||(14305150-14305303)
chr4 (85-167)||(386052-386134)
chr4 (125-238)||(18071423-18071536)
chr4 (85-177)||(35170944-35171036)
chr4 (85-148)||(17991367-17991430)
chr4 (85-171)||(12522406-12522492)
chr4 (85-238)||(23838688-23838841)
chr4 (85-177)||(14685487-14685579)
chr4 (85-209)||(9271802-9271926)
chr4 (85-177)||(14679278-14679370)
chr4 (85-177)||(41385443-41385535)
chr4 (85-179)||(30234876-30234970)
chr4 (85-179)||(53433691-53433785)
chr4 (133-238)||(12349320-12349425)
[»] chr3 (66 HSPs)
chr3 (85-238)||(31422250-31422403)
chr3 (85-238)||(10845981-10846133)
chr3 (85-238)||(37615647-37615800)
chr3 (85-238)||(26788502-26788655)
chr3 (85-238)||(26794092-26794245)
chr3 (85-238)||(26889711-26889864)
chr3 (85-238)||(6598974-6599127)
chr3 (85-238)||(6605654-6605807)
chr3 (85-238)||(10153432-10153585)
chr3 (85-238)||(16623752-16623905)
chr3 (87-238)||(16634107-16634258)
chr3 (87-238)||(16640717-16640868)
chr3 (87-238)||(43161382-43161533)
chr3 (87-238)||(43167619-43167770)
chr3 (85-238)||(418256-418409)
chr3 (85-238)||(14672897-14673050)
chr3 (85-238)||(16489367-16489520)
chr3 (85-238)||(5106581-5106734)
chr3 (85-238)||(48423624-48423777)
chr3 (85-238)||(48430402-48430555)
chr3 (85-238)||(53380049-53380201)
chr3 (85-238)||(53386701-53386853)
chr3 (87-238)||(1332760-1332910)
chr3 (85-238)||(5149665-5149818)
chr3 (85-238)||(41201495-41201648)
chr3 (85-238)||(23704466-23704619)
chr3 (85-238)||(23722922-23723075)
chr3 (85-238)||(23741378-23741531)
chr3 (87-238)||(16747538-16747689)
chr3 (85-238)||(15726629-15726782)
chr3 (87-238)||(16758270-16758421)
chr3 (85-238)||(5221660-5221813)
chr3 (85-208)||(30066234-30066357)
chr3 (85-179)||(14499642-14499736)
chr3 (85-179)||(15691975-15692069)
chr3 (89-206)||(13251007-13251124)
chr3 (89-206)||(13257653-13257770)
chr3 (85-208)||(11070356-11070479)
chr3 (85-208)||(11165227-11165350)
chr3 (89-176)||(41092048-41092135)
chr3 (85-238)||(20057100-20057253)
chr3 (85-238)||(20063738-20063891)
chr3 (85-167)||(22643036-22643118)
chr3 (85-167)||(55023174-55023256)
chr3 (125-238)||(3690875-3690988)
chr3 (125-238)||(10904483-10904596)
chr3 (125-238)||(10911155-10911268)
chr3 (85-177)||(839562-839654)
chr3 (125-238)||(10003893-10004006)
chr3 (125-238)||(10010540-10010653)
chr3 (85-238)||(24188032-24188185)
chr3 (85-177)||(55149294-55149386)
chr3 (85-238)||(20723256-20723409)
chr3 (92-178)||(13315892-13315978)
chr3 (85-179)||(15825978-15826072)
chr3 (85-177)||(7986022-7986114)
chr3 (85-179)||(15991801-15991895)
chr3 (85-122)||(22670584-22670621)
chr3 (85-177)||(28350859-28350951)
chr3 (125-234)||(6608739-6608848)
chr3 (85-179)||(10236092-10236185)
chr3 (85-179)||(12891720-12891814)
chr3 (85-179)||(17252754-17252848)
chr3 (85-179)||(19809343-19809437)
chr3 (131-176)||(4710616-4710661)
chr3 (133-238)||(12482684-12482789)
[»] scaffold0044 (3 HSPs)
scaffold0044 (85-238)||(30782-30935)
scaffold0044 (85-238)||(72596-72749)
scaffold0044 (85-238)||(8314-8467)
[»] chr8 (24 HSPs)
chr8 (85-238)||(17669268-17669421)
chr8 (85-238)||(17675920-17676073)
chr8 (85-238)||(5534137-5534290)
chr8 (85-234)||(20019638-20019787)
chr8 (85-238)||(21915268-21915421)
chr8 (85-238)||(22084086-22084239)
chr8 (85-238)||(22123083-22123236)
chr8 (85-234)||(20013562-20013710)
chr8 (85-238)||(28455014-28455167)
chr8 (85-238)||(16882870-16883023)
chr8 (85-238)||(18865586-18865739)
chr8 (85-238)||(18855191-18855344)
chr8 (85-238)||(29123340-29123493)
chr8 (85-238)||(8354461-8354614)
chr8 (89-206)||(19111513-19111630)
chr8 (89-206)||(19117804-19117921)
chr8 (85-176)||(22115418-22115509)
chr8 (125-238)||(19496645-19496758)
chr8 (85-238)||(22048201-22048354)
chr8 (85-160)||(22122120-22122195)
chr8 (88-177)||(19905812-19905901)
chr8 (85-238)||(20527704-20527857)
chr8 (85-179)||(26934874-26934968)
chr8 (85-172)||(20023626-20023713)
[»] chr2 (36 HSPs)
chr2 (85-238)||(24913662-24913815)
chr2 (85-238)||(26877266-26877419)
chr2 (85-238)||(22320684-22320837)
chr2 (85-238)||(22326837-22326990)
chr2 (85-238)||(27216321-27216474)
chr2 (87-238)||(9340538-9340689)
chr2 (87-238)||(9489172-9489323)
chr2 (87-238)||(9608433-9608584)
chr2 (89-238)||(23171293-23171442)
chr2 (89-238)||(23582550-23582699)
chr2 (87-238)||(13306289-13306440)
chr2 (87-238)||(16986199-16986350)
chr2 (87-238)||(28431612-28431763)
chr2 (85-238)||(12829325-12829478)
chr2 (85-238)||(1843338-1843491)
chr2 (87-234)||(19489624-19489771)
chr2 (85-238)||(27599519-27599672)
chr2 (85-238)||(27617551-27617704)
chr2 (85-238)||(29233784-29233937)
chr2 (85-238)||(29347083-29347236)
chr2 (85-206)||(16997337-16997458)
chr2 (85-208)||(10101343-10101466)
chr2 (85-206)||(17003970-17004091)
chr2 (118-238)||(16922787-16922907)
chr2 (85-177)||(27197201-27197293)
chr2 (125-238)||(10866627-10866740)
chr2 (125-238)||(10873794-10873907)
chr2 (119-206)||(16928643-16928730)
chr2 (85-177)||(24503426-24503518)
chr2 (87-129)||(16980567-16980609)
chr2 (85-179)||(37318589-37318683)
chr2 (85-179)||(24872105-24872199)
chr2 (85-179)||(24879990-24880084)
chr2 (85-179)||(30970677-30970771)
chr2 (85-117)||(16928832-16928864)
chr2 (85-114)||(29282482-29282511)
[»] scaffold0155 (1 HSPs)
scaffold0155 (85-238)||(9514-9667)
[»] chr1 (28 HSPs)
chr1 (85-238)||(20215626-20215779)
chr1 (87-238)||(43078695-43078846)
chr1 (87-238)||(46157020-46157171)
chr1 (85-238)||(41478274-41478428)
chr1 (85-238)||(44844580-44844734)
chr1 (85-238)||(18599803-18599956)
chr1 (85-238)||(21828969-21829122)
chr1 (85-238)||(21844482-21844635)
chr1 (85-206)||(51328376-51328497)
chr1 (85-206)||(51335010-51335131)
chr1 (85-208)||(1011008-1011131)
chr1 (85-238)||(47659472-47659625)
chr1 (125-238)||(16345512-16345625)
chr1 (125-238)||(16352160-16352273)
chr1 (125-238)||(41356025-41356138)
chr1 (85-177)||(20524913-20525005)
chr1 (125-238)||(41348588-41348701)
chr1 (85-238)||(21438049-21438202)
chr1 (85-238)||(23763466-23763619)
chr1 (85-177)||(19063836-19063928)
chr1 (85-177)||(19105069-19105161)
chr1 (85-177)||(19111726-19111818)
chr1 (86-179)||(8305450-8305543)
chr1 (85-179)||(50887450-50887544)
chr1 (95-238)||(44756360-44756503)
chr1 (133-238)||(27898405-27898510)
chr1 (133-238)||(43063022-43063127)
chr1 (133-238)||(49334827-49334932)
[»] scaffold0052 (3 HSPs)
scaffold0052 (87-238)||(10614-10765)
scaffold0052 (87-238)||(57036-57187)
scaffold0052 (85-238)||(750-903)
[»] scaffold0061 (1 HSPs)
scaffold0061 (85-238)||(59158-59311)
[»] scaffold0032 (1 HSPs)
scaffold0032 (85-238)||(109022-109175)
[»] scaffold0017 (1 HSPs)
scaffold0017 (85-238)||(139322-139475)
[»] scaffold0140 (1 HSPs)
scaffold0140 (87-238)||(38959-39110)
[»] scaffold0109 (2 HSPs)
scaffold0109 (85-238)||(26897-27050)
scaffold0109 (85-148)||(43636-43699)
[»] scaffold0029 (2 HSPs)
scaffold0029 (85-238)||(125811-125964)
scaffold0029 (85-238)||(105576-105729)
[»] scaffold0005 (1 HSPs)
scaffold0005 (85-238)||(307351-307504)
[»] scaffold0349 (1 HSPs)
scaffold0349 (85-179)||(12736-12830)
[»] scaffold0525 (1 HSPs)
scaffold0525 (85-208)||(3574-3697)
[»] scaffold0141 (1 HSPs)
scaffold0141 (85-238)||(38297-38450)
[»] scaffold0049 (1 HSPs)
scaffold0049 (85-238)||(76362-76515)
[»] scaffold0003 (1 HSPs)
scaffold0003 (125-238)||(57229-57342)
[»] scaffold0180 (1 HSPs)
scaffold0180 (84-179)||(3023-3118)
[»] scaffold0004 (1 HSPs)
scaffold0004 (85-238)||(58116-58269)
[»] scaffold0560 (1 HSPs)
scaffold0560 (85-179)||(5496-5590)
[»] scaffold0216 (1 HSPs)
scaffold0216 (85-179)||(8575-8669)
[»] scaffold0010 (1 HSPs)
scaffold0010 (85-238)||(242312-242465)
[»] scaffold0259 (1 HSPs)
scaffold0259 (85-177)||(10493-10585)
[»] scaffold0233 (1 HSPs)
scaffold0233 (85-177)||(14238-14330)
[»] scaffold0138 (2 HSPs)
scaffold0138 (85-177)||(29905-29997)
scaffold0138 (85-135)||(41901-41951)
[»] scaffold0013 (1 HSPs)
scaffold0013 (85-177)||(9656-9748)
[»] scaffold0431 (1 HSPs)
scaffold0431 (85-179)||(12758-12852)
[»] scaffold0370 (1 HSPs)
scaffold0370 (85-167)||(17430-17512)
[»] scaffold0256 (2 HSPs)
scaffold0256 (85-177)||(24673-24765)
scaffold0256 (85-139)||(19830-19884)
[»] scaffold0780 (1 HSPs)
scaffold0780 (85-179)||(428-522)
[»] scaffold0156 (1 HSPs)
scaffold0156 (85-179)||(3086-3180)
[»] scaffold0055 (1 HSPs)
scaffold0055 (87-119)||(61180-61212)
[»] scaffold0553 (1 HSPs)
scaffold0553 (133-238)||(9044-9149)
[»] scaffold0126 (1 HSPs)
scaffold0126 (133-238)||(3824-3929)
[»] scaffold0051 (1 HSPs)
scaffold0051 (85-177)||(37023-37115)


Alignment Details
Target: scaffold0028 (Bit Score: 118; Significance: 3e-60; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 67916 - 67763
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||     
T  67916 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagtactc 67817  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  67816 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 67763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 57452 - 57299
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||     
T  57452 catacctagtattgattaggaatgaatgtagaatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactc 57353  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | ||| ||| ||||||||||||||||||    
T  57352 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 57299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 41945 - 41792
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||||||||||||| |  ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||  ||     
T  41945 catacctagtattgattaggaatgaatgtaggatcatattgaacccagaacaacactagtttgggatttgagtggtactcgccatggcgagtaagaactc 41846  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | ||| ||| ||||||||||||||||||    
T  41845 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 41792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 7410 - 7318
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||| |||||||| ||||||||||||  |||  | ||| ||||||||  |||||||||| |||  |||||||||||| ||||||||||    
T  7410 tacctagtaatgattagggatgaatgtaggacaagattggacccagaacaactttagtttgggaattgtttggtactcgccacggcgagtaag 7318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 23443 - 23363
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcg 165  Q
    ||||||||||| |||||||| ||||||||||||  |||  | ||| ||||||||  |||||||||| |||  |||||||||    
T  23443 catacctagtaatgattagggatgaatgtaggacaagattggacccagaacaactttagtttgggaattgtttggtactcg 23363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 60374 - 60527
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||||||||||||| |||     
T  60374 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 60473  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  60474 tcgcctcgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatctgtg 60527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 234
Target Start/End: Complemental strand, 14337778 - 14337629
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  14337778 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 14337679  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatc 234  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||    
T  14337678 tcgcctcgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatc 14337629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 234
Target Start/End: Complemental strand, 14331194 - 14331045
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  14331194 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 14331095  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatc 234  Q
    |||| ||| ||||||||| || ||||||||||||||||||||||||||||    
T  14331094 tcgcctcgcgagtacaactaggatgaacttgtttgtgtgtttgtgcgatc 14331045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 40523059 - 40523212
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  40523059 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 40523158  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  40523159 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 40523212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 9510710 - 9510863
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  9510710 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 9510809  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||| ||||||| ||||||| |||||||||||    
T  9510810 tcgcctcgcgagtacaaccaggatgagcttgtttatgtgtttatgcgatctgtg 9510863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 15155867 - 15156020
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||  ||     
T  15155867 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 15155966  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| ||||| ||| ||||||||||||||||||    
T  15155967 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 15156020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 18164371 - 18164524
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  18164371 catacctagcattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 18164470  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  18164471 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 18164524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 13684870 - 13684717
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||||||||||||||||||  ||     
T  13684870 catacctagtattgattaggaatgaatgtaggatcagagggaacccataacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 13684771  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| ||||| ||| ||||||||||||||||||    
T  13684770 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 13684717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 13691485 - 13691332
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||||||||||||||||||  ||     
T  13691485 catacctagtattgattaggaatgaatgtaggatcagagggaacccataacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 13691386  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| ||||| ||| ||||||||||||||||||    
T  13691385 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 13691332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 15162518 - 15162671
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||||  ||     
T  15162518 catacctagtattgattaggaatgaatgtaggatcagagggaacccaggacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 15162617  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| ||||| ||| ||||||||||||||||||    
T  15162618 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 15162671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 16406992 - 16407145
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||||||||||||||||  ||     
T  16406992 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacgttagtttgggagatgagtggtactcgccatggcgagtaagaactc 16407091  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| ||||| ||| ||||||||||||||||||    
T  16407092 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 16407145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 22088 - 21937
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  22088 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 21989  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  21988 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 21937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 8201774 - 8201925
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  8201774 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 8201873  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  8201874 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 8201925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 15022538 - 15022384
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| |||||||||||||||||| |||     
T  15022538 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagagctc 15022439  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtg-tttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||||||| || |||| |||||||||||||||    
T  15022438 tcgcctcgcgagtacaaccaggatgaacttgattatgtgttttgtgcgatctgtg 15022384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 20702689 - 20702842
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  20702689 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 20702788  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||  |  || ||| ||||||||||||||||||    
T  20702789 tcgcctcgcgagcacaaccagaatttagatgcttgagtgtttgtgcgatctgtg 20702842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 32768082 - 32767929
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  32768082 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 32767983  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||  |  || ||| ||||||||||||||||||    
T  32767982 tcgcctcgcgagcacaaccagaatttagatgcttgagtgtttgtgcgatctgtg 32767929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 11366608 - 11366455
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||   ||  |||||||||||||||||||||||||||||||||||  ||     
T  11366608 catacctagtattgattaggaatgaatgtaagatcagagggaacccagaacaagtttatgttgggagttgagtggtactcgccatggcgagtaagaactc 11366509  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||| |||| ||||| |||||| |||||||||||||||||||    
T  11366508 tcgcctcgcgagcacagccaggatgaagttgtttatgtgtttgtgcgatctgtg 11366455  T

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Target: chr7; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 14655114 - 14655267
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||||||||||||||||  ||     
T  14655114 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccatggcgagtaaggactc 14655213  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| | | |||| ||| | ||| ||| ||||||||||||||||||    
T  14655214 tcgcctcgcgagcatagccaggatgtagttgcttgagtgtttgtgcgatctgtg 14655267  T

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Target: chr7; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 18176512 - 18176359
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||||| ||||||||||  ||     
T  18176512 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactc 18176413  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||| |||| ||| | ||| ||||| ||||||||||||||||    
T  18176412 tcgcctcgcgagcacagccaggatgtagttgcttgtgagtttgtgcgatctgtg 18176359  T

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Target: chr7; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 18183184 - 18183031
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||||| ||||||||||  ||     
T  18183184 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactc 18183085  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||| |||| ||| | ||| ||||| ||||||||||||||||    
T  18183084 tcgcctcgcgagcacagccaggatgtagttgcttgtgagtttgtgcgatctgtg 18183031  T

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Target: chr7; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 12703085 - 12703180
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagt 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  12703085 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagt 12703180  T

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Target: chr7; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 44786172 - 44786293
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||   |||||||||||||||||||| ||||||||||||||||||  ||     
T  44786172 catacctagtattgattaggaatgaatgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactc 44786271  T
Q  185 tcgcttcgggagtacaaccaga 206  Q
    |||| ||| |||||||||||||    
T  44786272 tcgcctcgcgagtacaaccaga 44786293  T

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Target: chr7; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 44792813 - 44792934
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||   |||||||||||||||||||| ||||||||||||||||||  ||     
T  44792813 catacctagtattgattaggaatgaatgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactc 44792912  T
Q  185 tcgcttcgggagtacaaccaga 206  Q
    |||| ||| |||||||||||||    
T  44792913 tcgcctcgcgagtacaaccaga 44792934  T

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Target: chr7; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 12704356 - 12704450
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12704356 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaag 12704450  T

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Target: chr7; HSP #25
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 85 - 208
Target Start/End: Complemental strand, 33515 - 33392
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||| ||||||| ||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  33515 catacctagtattaattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 33416  T
Q  185 tcgcttcgggagtacaaccagaat 208  Q
    |||| ||| ||| ||| |||||||    
T  33415 tcgcctcgcgagcacatccagaat 33392  T

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Target: chr7; HSP #26
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 70463 - 70586
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||  ||     
T  70463 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaatactagtttgggagatgagtggtactcgccatggcgagtaagaactc 70562  T
Q  185 tcgcttcgggagtacaaccagaat 208  Q
    |||| ||| ||| ||| |||||||    
T  70563 tcgcctcgcgagcacatccagaat 70586  T

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Target: chr7; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 11238673 - 11238760
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagt 176  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||||||||||    
T  11238673 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagt 11238760  T

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Target: chr7; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 74571 - 74695
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacct-agaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgct 183  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||  ||||||| ||||||||||||| |||||||||||||||||||||||||||  ||    
T  74571 catacctagtattgattaggattgaatgtaggatcagattgaaccccagaacaatactagtttgggagatgagtggtactcgccatggcgagtaagaact 74670  T
Q  184 ttcgcttcgggagtacaaccagaat 208  Q
     |||| ||| ||| ||| |||||||    
T  74671 ctcgcctcgcgagcacatccagaat 74695  T

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Target: chr7; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 1347911 - 1347824
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagt 176  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||||||||||    
T  1347911 cctagtatttattaggaatgaatgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagt 1347824  T

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Target: chr7; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 11231986 - 11232073
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagt 176  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||||||||||    
T  11231986 cctagtattgattaggaataaatgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagt 11232073  T

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Target: chr7; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 4318243 - 4318335
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||| ||||||||  |||  ||||| |||||||||||||||||||| |||| |||||||||||||||||||||    
T  4318243 catacctagtaatgattaggaatggatgtaggacaagattgaacccagaacaacactagtttgggaattgactggtactcgccatggcgagta 4318335  T

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Target: chr7; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 14148977 - 14148885
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| |||||||| | |||| |||||||||||||||||||||    
T  14148977 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagtttggaaattgactggtactcgccatggcgagta 14148885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 14953605 - 14953452
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||  | ||     
T  14953605 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 14953506  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||  ||||| || | | ||||| ||||||||||||||||||    
T  14953505 tcgcctcgcgagcacttccagattggagtggtttgagtgtttgtgcgatctgtg 14953452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 11262736 - 11262644
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||    
T  11262736 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagta 11262644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 11547965 - 11548057
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||    
T  11547965 catacctagtaatgattaggaatgaatgtaggaaaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagta 11548057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 11554561 - 11554653
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||    
T  11554561 catacctagtaatgattaggaatgaatgtaggaaaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagta 11554653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 14959571 - 14959479
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||    
T  14959571 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagta 14959479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 12692903 - 12692750
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| ||||||||||||||||| |||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||  | ||     
T  12692903 catacctagtaatgattaggaatgaatgtcggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 12692804  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||  ||||| || | |  |||| ||||||||||||||||||    
T  12692803 tcgcctcgcgagcacttccagattggagtgttttgagtgtttgtgcgatctgtg 12692750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 49051722 - 49051625
Alignment:
Q  141 tagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||||||||||||||||||||||||||| ||||||||||  || |||| ||  |||||||||||||||| | ||   || ||||||||||||||||||    
T  49051722 tagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcacgagtacaaccagaatgtagtttcctgagtgtttgtgcgatctgtg 49051625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 18531652 - 18531558
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||  |||  ||||| ||||||||| |||||||  | |||| | |||||||||||||||||||||    
T  18531652 catacctagtaatgattagggatgaatgtaggacaagattgaacccagaacaacattagtttgaaacttgacttgtactcgccatggcgagtaag 18531558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 25038908 - 25039000
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||| | |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | ||||||||||||| |||||    
T  25038908 catacctagaaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggtgagta 25039000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 44408057 - 44408139
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgcc 167  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||    
T  44408057 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgcc 44408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 26420385 - 26420325
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtt 145  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| |||||    
T  26420385 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagtt 26420325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 6016869 - 6016963
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||  |||   |||| |||||| || |||||||| | |||  | |||||||||||||||||||||    
T  6016869 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaag 6016963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 18585046 - 18585151
Alignment:
Q  133 aacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 232  Q
    ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| | ||||||| ||| ||||||||    
T  18585046 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagttgtttgagtggttgtgcga 18585145  T
Q  233 tctgtg 238  Q
    ||||||    
T  18585146 tctgtg 18585151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 8706355 - 8706250
Alignment:
Q  133 aacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 232  Q
    ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| ||| ||||||||    
T  8706355 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtggttgtgcga 8706256  T
Q  233 tctgtg 238  Q
    ||||||    
T  8706255 tctgtg 8706250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 8719771 - 8719666
Alignment:
Q  133 aacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 232  Q
    ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| ||| ||||||||    
T  8719771 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtggttgtgcga 8719672  T
Q  233 tctgtg 238  Q
    ||||||    
T  8719671 tctgtg 8719666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 18553278 - 18553383
Alignment:
Q  133 aacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 232  Q
    ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| ||| ||||||||    
T  18553278 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtggttgtgcga 18553377  T
Q  233 tctgtg 238  Q
    ||||||    
T  18553378 tctgtg 18553383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 3e-60; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 2869833 - 2869986
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||| ||||||||||||||||||| ||     
T  2869833 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactc 2869932  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  2869933 tcgcctcgcgagtacaaccagaatgaacttgtttatgtgtttgtgcgatctgtg 2869986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 2876448 - 2876601
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||| ||||||||||||||||||| ||     
T  2876448 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactc 2876547  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  2876548 tcgcctcgcgagtacaaccagaatgaacttgtttatgtgtttgtgcgatctgtg 2876601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 4233196 - 4233349
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  || |||||||||||||||||||||| |||||||||||||| ||     
T  4233196 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttattttgggagttgagtggtactcgtcatggcgagtaagtactc 4233295  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4233296 tcgcctcgcgagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 4233349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 6981067 - 6980914
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  6981067 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 6980968  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  6980967 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 6980914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 20649491 - 20649644
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  20649491 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 20649590  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||| |||||| ||||||| |||||||||||    
T  20649591 tcgcctcgcgagtacaaccaggatgaatttgtttatgtgtttatgcgatctgtg 20649644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 20061058 - 20060905
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||||||||||||| ||||||| |||||||||| |||     
T  20061058 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtgctcgccaaggcgagtaagagctc 20060959  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  20060958 tcgcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 20060905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 8229294 - 8229143
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  8229294 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggttctcgccatggcgagtaagtactctc 8229195  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  8229194 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 8229143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 18931483 - 18931332
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  18931483 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 18931384  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  18931383 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 18931332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 29587379 - 29587530
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  29587379 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 29587478  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  29587479 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 29587530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 29593520 - 29593671
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  29593520 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 29593619  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  29593620 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 29593671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 12763110 - 12762957
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||   |||||||||||||||| ||||||||||||||||||||||| ||     
T  12763110 catacctagtattgattaggaatgaatttaggatcagagggaacccagaacaagcttagtttgggagttgagaggtactcgccatggcgagtaagtactc 12763011  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||  |||||||||||| |||||||||||| ||||||| |||||||||||    
T  12763010 tcgcctcacgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 12762957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 89 - 238
Target Start/End: Original strand, 14059318 - 14059467
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||| ||||||||||||||||||||||||||||||  || ||||    
T  14059318 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttggaagttgagtggtactcgccatggcgagtaagaactctcgc 14059417  T
Q  189 ttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
     ||| |||||||||||||||||  |||||| |||||||||||||||||||    
T  14059418 ctcgcgagtacaaccagaatgagattgtttatgtgtttgtgcgatctgtg 14059467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 27327754 - 27327907
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||  ||     
T  27327754 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagattagtttgggagttgagtggtactcgccatggcgagtaagaactc 27327853  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||| ||||||| | ||| ||| ||||||||||||||||||    
T  27327854 tcgcctcgcgagcacaatcagaatgtagttgcttgagtgtttgtgcgatctgtg 27327907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 27388494 - 27388647
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||  ||     
T  27388494 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagattagtttgggagttgagtggtactcgccatggcgagtaagaactc 27388593  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||| ||||||| | ||| ||| ||||||||||||||||||    
T  27388594 tcgcctcgcgagcacaatcagaatgtagttgcttgagtgtttgtgcgatctgtg 27388647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 1538642 - 1538791
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||     
T  1538642 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactc 1538741  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatc 234  Q
    |||| ||| ||| |||||||||||| | ||  ||| ||||||||||||||    
T  1538742 tcgcctcgcgagcacaaccagaatgtagtttcttgagtgtttgtgcgatc 1538791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 1544741 - 1544890
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||     
T  1544741 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactc 1544840  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatc 234  Q
    |||| ||| ||| |||||||||||| | ||  ||| ||||||||||||||    
T  1544841 tcgcctcgcgagcacaaccagaatgtagtttcttgagtgtttgtgcgatc 1544890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 90 - 238
Target Start/End: Complemental strand, 30597621 - 30597473
Alignment:
Q  90 ctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgct 189  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||  | |||||||||||||||||||||||||||||||||||||| || ||||     
T  30597621 ctagtattgattaggaatgaatgtaggatcagaaggaacccagaacaaccttggtttgggagttgagtggtactcgccatggcgagtaagtactctcgcc 30597522  T
Q  190 tcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    ||| ||| |||||||  ||| | |||||| |||||||||||||||||||    
T  30597521 tcgcgagcacaaccaatatggaattgtttatgtgtttgtgcgatctgtg 30597473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 30637830 - 30637980
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||| | |||||||||||| ||||||||||||||||||| || ||    
T  30637830 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtt-gtgagttgagtggtgctcgccatggcgagtaagtactctc 30637928  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| |||||||||  | |||||||||||||||||||    
T  30637929 gcctcgcgagtacaaccaggatgaacttgagtatgtgtttgtgcgatctgtg 30637980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 18194222 - 18194375
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||||| ||||||||||  ||     
T  18194222 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactc 18194321  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||| |||| ||| | ||| ||||| ||||||||||||||||    
T  18194322 tcgcctcgcgagcacagccaggatgtagttgcttgtgagtttgtgcgatctgtg 18194375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 30694767 - 30694618
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||   || ||||||||||||||||||||||||||||||||||||  || ||||    
T  30694767 cctagtattgattaggaatgaatgtaggatcagagggaacccaaaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactctcgc 30694668  T
Q  189 ttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
     ||| ||| ||| |||| ||| | ||| ||||||||||||||||||||||    
T  30694667 ctcgcgagcacagccaggatgcagttgcttgtgtgtttgtgcgatctgtg 30694618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 26130877 - 26130786
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagt 176  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  26130877 catacctagtattgattgggaatgaatgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagt 26130786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 17031279 - 17031126
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||||||||||   ||  ||||| | ||||||| |||||||||| ||||||||||||||||||||||||||||  ||     
T  17031279 catacctagtattgattaggaatgaatgtaggacaggatagaacccaaaacaacattagtttgggaattgagtggtactcgccatggcgagtaagaactc 17031180  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||| ||||||| | ||| ||| ||||||||||||||||||    
T  17031179 tcgcctcgcgagcacaaacagaatgtagttgcttgagtgtttgtgcgatctgtg 17031126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 8797559 - 8797446
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||| ||||||||||||||| ||    
T  8797559 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttgtgcgt 8797460  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  8797459 ttgtgcgatctgtg 8797446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 27430021 - 27430134
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| ||||||||| ||||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  27430021 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 27430120  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  27430121 ttgtgcgatctgtg 27430134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 28258152 - 28258304
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||| | |||||   ||  ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| ||     
T  28258152 catacctagtattgattaggaatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 28258251  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| | ||| ||| ||| ||||||||||||||    
T  28258252 tcgcctcgcgagtacaaccagaatgtagttgcttgagtg-ttgtgcgatctgtg 28258304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 28264776 - 28264928
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||| | |||||   ||  ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| ||     
T  28264776 catacctagtattgattaggaatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 28264875  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| | ||| ||| ||| ||||||||||||||    
T  28264876 tcgcctcgcgagtacaaccagaatgtagttgcttgagtg-ttgtgcgatctgtg 28264928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 28336901 - 28337053
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||| | |||||   ||  ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| ||     
T  28336901 catacctagtattgattaggaatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 28337000  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| | ||| ||| ||| ||||||||||||||    
T  28337001 tcgcctcgcgagtacaaccagaatgtagttgcttgagtg-ttgtgcgatctgtg 28337053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 28343525 - 28343677
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||| | |||||   ||  ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| ||     
T  28343525 catacctagtattgattaggaatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 28343624  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| | ||| ||| ||| ||||||||||||||    
T  28343625 tcgcctcgcgagtacaaccagaatgtagttgcttgagtg-ttgtgcgatctgtg 28343677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 20802124 - 20802012
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| ||||||||| ||||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| |||     
T  20802124 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtg- 20802026  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  20802025 ttgtgcgatctgtg 20802012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 22331848 - 22331756
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||  |||||||| | |||| |||||||||||||||||||||    
T  22331848 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacgttagtttggaaattgactggtactcgccatggcgagta 22331756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 17037033 - 17037186
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||||||||||   ||  ||||| ||||||||| |||||||||| || ||||||||| |||||| ||||| ||  ||     
T  17037033 catacctagtattgattaggaatgaatgtaggacaggattgaacccagaacaacattagtttgggaattaagtggtacttgccatgacgagtgagaactc 17037132  T
Q  185 tcgcttcgggagtacaaccagaatg-aacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||| |||||||| |  ||||||| ||| ||||||||||||||    
T  17037133 tcgcctcgcgagcacatccagaatgtaggttgtttgagtg-ttgtgcgatctgtg 17037186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 19808935 - 19808843
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  ||   ||||||||||||||| | |||||| | |||| |||||||||||||||||||||    
T  19808935 catacctagtaatgattaggaatgaatgtaggacaagtttgaacctagaacaacattggtttggaatttgactggtactcgccatggcgagta 19808843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 16372267 - 16372175
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    |||| |||||| |||||||| ||||||||||||  |||  ||||| ||||||||| |||||||| | |||| |||||||||||||||||||||    
T  16372267 catatctagtaatgattagggatgaatgtaggacaagattgaacccagaacaacattagtttggaaattgactggtactcgccatggcgagta 16372175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 34833063 - 34832969
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||  |||  | ||| ||||||||  |||||||||| ||| ||||||||||| ||||||||||||    
T  34833063 catacctagtaatgattagggatgaatgtaggacaagattggacccagaacaactttagtttgggaattgtgtggtactcgctatggcgagtaag 34832969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 34369671 - 34369824
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| |||||||| ||||||||||||  |||  ||||| ||||||||| |||||||  | |||| | ||||||||||||||||||| || ||     
T  34369671 catacctagtaatgattagggatgaatgtaggacaagattgaacccagaacaacattagtttgtaatttgacttgtactcgccatggcgagtatgtactc 34369770  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||  ||||| || | |   ||| ||||||||||||||||||    
T  34369771 tcgcctcgcgagcacttccagattggagtgccttgagtgtttgtgcgatctgtg 34369824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 28287707 - 28287612
Alignment:
Q  142 agtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||| ||||||||||||||    
T  28287707 agttggggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtg-ttgtgcgatctgtg 28287612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 3708180 - 3708274
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| ||||||||||||||||||||   |||    ||| ||||||||  |||||||||| |||  |||||||||||||||||||||||    
T  3708180 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 3708274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 14099035 - 14098941
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| ||||||||||||||||||||   |||    ||| ||||||||  |||||||||| |||  |||||||||||||||||||||||    
T  14099035 catacctagtaatgattaggaatgaatgtagggcaagattagacccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 14098941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 28314940 - 28314827
Alignment:
Q  125 gaacctagaacaacactagtttgggagtt-gagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtg 223  Q
    ||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||||||  || |||| ||| ||| |   |||||||| | |  ||||||||    
T  28314940 gaacccagaacaacattagtt-gggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcaagtccagaatgtagtgttttgtgtg 28314842  T
Q  224 tttgtgcgatctgtg 238  Q
    |||||||||||||||    
T  28314841 tttgtgcgatctgtg 28314827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 25595050 - 25595144
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||| ||||||||  |||  | ||| ||||||||  |||||||||| |||   ||||||||||||||||||||||    
T  25595050 catacctagtaatgattagggatggatgtaggacgagattggacccagaacaactttagtttgggaattgttgggtactcgccatggcgagtaag 25595144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 27186078 - 27185965
Alignment:
Q  125 gaacctagaacaacactagtttgggagtt-gagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtg 223  Q
    ||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||||||  || |||| ||| ||| |   |||||||| | |  ||||||||    
T  27186078 gaacccagaacaacattagtt-gggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcaagtccagaatgtagtgttttgtgtg 27185980  T
Q  224 tttgtgcgatctgtg 238  Q
    |||| ||||||||||    
T  27185979 tttgcgcgatctgtg 27185965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 27207914 - 27207801
Alignment:
Q  125 gaacctagaacaacactagtttgggagtt-gagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtg 223  Q
    ||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||||||  || |||| ||| ||| |   |||||||| | |  ||||||||    
T  27207914 gaacccagaacaacattagtt-gggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcaagtccagaatgtagtgttttgtgtg 27207816  T
Q  224 tttgtgcgatctgtg 238  Q
    |||| ||||||||||    
T  27207815 tttgcgcgatctgtg 27207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 27241314 - 27241427
Alignment:
Q  125 gaacctagaacaacactagtttgggagtt-gagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtg 223  Q
    ||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||||||  || |||| ||| ||| |   |||||||| | |  ||||||||    
T  27241314 gaacccagaacaacattagtt-gggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcaagtccagaatgtagtgttttgtgtg 27241412  T
Q  224 tttgtgcgatctgtg 238  Q
    |||| ||||||||||    
T  27241413 tttgcgcgatctgtg 27241427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 27263162 - 27263275
Alignment:
Q  125 gaacctagaacaacactagtttgggagtt-gagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtg 223  Q
    ||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||||||  || |||| ||| ||| |   |||||||| | |  ||||||||    
T  27263162 gaacccagaacaacattagtt-gggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcaagtccagaatgtagtgttttgtgtg 27263260  T
Q  224 tttgtgcgatctgtg 238  Q
    |||| ||||||||||    
T  27263261 tttgcgcgatctgtg 27263275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 31164544 - 31164597
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaac 138  Q
    ||||||||||| |||||||||||||||||||||| |||  | ||||||||||||    
T  31164544 catacctagtaatgattaggaatgaatgtaggatgagattggacctagaacaac 31164597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 34295765 - 34295834
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttg 154  Q
    ||||||||||  |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||    
T  34295765 catacctagtgatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttg 34295834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 32564988 - 32565093
Alignment:
Q  133 aacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 232  Q
    ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| ||| ||||||||    
T  32564988 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtggttgtgcga 32565087  T
Q  233 tctgtg 238  Q
    ||||||    
T  32565088 tctgtg 32565093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 4168338 - 4168302
Alignment:
Q  80 ctgctcatacctagtattgattaggaatgaatgtagg 116  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  4168338 ctgcacatacctagtaatgattaggaatgaatgtagg 4168302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 4209018 - 4208982
Alignment:
Q  80 ctgctcatacctagtattgattaggaatgaatgtagg 116  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  4209018 ctgcacatacctagtaatgattaggaatgaatgtagg 4208982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 22759259 - 22759227
Alignment:
Q  85 catacctagtattgattaggaatgaatgtagga 117  Q
    |||||||||||||||||||| ||||||||||||    
T  22759259 catacctagtattgattagggatgaatgtagga 22759227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 3e-60; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 24471945 - 24472098
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||     
T  24471945 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagtactc 24472044  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  24472045 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 24472098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 27609147 - 27608994
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  || ||||||||||||||||||||||||||||||||||||| ||     
T  27609147 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttaatttgggagttgagtggtactcgccatggcgagtaagtactc 27609048  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  27609047 tcgcctcgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatctgtg 27608994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 14994733 - 14994886
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||  ||     
T  14994733 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 14994832  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||    
T  14994833 tcgcctcgcgagtacaaccagaatgaacttgcttgagtgtttgtgcgatctgtg 14994886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 27615753 - 27615600
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  || ||||||||||||||||||||||||||||||||||||| ||     
T  27615753 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttaatttgggagttgagtggtactcgccatggcgagtaagtactc 27615654  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||||| |||||| ||||||||||||||||||||||||||||||||    
T  27615653 tcgcctcgcgagtaaaaccaggatgaacttgtttgtgtgtttgtgcgatctgtg 27615600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 27663487 - 27663640
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  27663487 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 27663586  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  27663587 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 27663640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 27670127 - 27670280
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  27670127 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 27670226  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  27670227 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 27670280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 41776224 - 41776071
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  41776224 catacctagtattgattaggaatgaaagtaggatcagagggaacctagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 41776125  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  41776124 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 41776071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 15001376 - 15001529
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||  ||     
T  15001376 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 15001475  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||||||||| ||| || |||||||||||||||    
T  15001476 tcgcctcgcgagtacaaccagaatgaacttgcttgagtatttgtgcgatctgtg 15001529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 17706628 - 17706781
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  17706628 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 17706727  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||| |||||||||||| ||||||| |||||||||||    
T  17706728 tcgcctcgcgagcacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 17706781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 22265349 - 22265200
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| || ||||    
T  22265349 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgc 22265250  T
Q  189 ttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
     ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  22265249 ctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 22265200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 41097920 - 41098073
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  41097920 catacctagtattgattaggaatgaaagtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 41098019  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  41098020 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 41098073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 41769650 - 41769497
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  41769650 catacctagtattgattaggaatgaaagtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 41769551  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  41769550 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 41769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 1692134 - 1692287
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||  ||     
T  1692134 catacctagtattgattaggaatgaatgtaggatcagagagaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 1692233  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| ||||| ||| ||||||||||||||||||    
T  1692234 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 1692287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 22062579 - 22062732
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||| ||||||||||||||||||| ||     
T  22062579 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagtactc 22062678  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  22062679 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 22062732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 16355251 - 16355100
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  16355251 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 16355152  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  16355151 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 16355100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 16361910 - 16361759
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  16361910 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 16361811  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  16361810 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 16361759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 34565244 - 34565093
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  34565244 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 34565145  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  34565144 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 34565093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 34571899 - 34571748
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  34571899 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 34571800  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  34571799 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 34571748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 18038365 - 18038518
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||  ||||||||||| |||||||||||||||||||||||||||  ||     
T  18038365 catacctagtattgattaggaatgaatgtaggatcagagggaacccaaaacaactttagtttgggagatgagtggtactcgccatggcgagtaagaactc 18038464  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| ||||| ||| ||||||||||||||||||    
T  18038465 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 18038518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 23584548 - 23584395
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||||| ||||||||||  ||     
T  23584548 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaaggactc 23584449  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||| ||| |||||| |||||||||||||||||||    
T  23584448 tcgcctcgcgagtacaaccagaacgaaattgtttttgtgtttgtgcgatctgtg 23584395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 27687026 - 27687179
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||||||||||||||||||||||| |||  ||     
T  27687026 catacctagtattgattaggaatgaatgtaggatcagagagaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagcaagaactc 27687125  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| ||||| ||| ||||||||||||||||||    
T  27687126 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 27687179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 37286478 - 37286631
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  37286478 catacctagtattgattaggattgaatgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 37286577  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| | ||| ||| ||||||||||||||||||    
T  37286578 tcgcctcgcgagtacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 37286631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 37293181 - 37293334
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  37293181 catacctagtattgattaggattgaatgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 37293280  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| | ||| ||| ||||||||||||||||||    
T  37293281 tcgcctcgcgagtacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 37293334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 90 - 238
Target Start/End: Complemental strand, 23610305 - 23610157
Alignment:
Q  90 ctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgct 189  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||||||||||||||||||||| || ||||     
T  23610305 ctagtattgattaggaatgaatgtaggatcagaggaaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcc 23610206  T
Q  190 tcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    ||| ||| |||||||||||| | |||||| |||||||||||||||||||    
T  23610205 tcgcgagcacaaccagaatggaattgtttatgtgtttgtgcgatctgtg 23610157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 90 - 238
Target Start/End: Complemental strand, 23841701 - 23841553
Alignment:
Q  90 ctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgct 189  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||||||||||||||||||||| || ||||     
T  23841701 ctagtattgattaggaatgaatgtaggatcagaggaaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcc 23841602  T
Q  190 tcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    ||| ||| |||||||||||| | |||||| |||||||||||||||||||    
T  23841601 tcgcgagcacaaccagaatggaattgtttatgtgtttgtgcgatctgtg 23841553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 25107190 - 25107039
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  25107190 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 25107091  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  25107090 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 25107039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 25166283 - 25166132
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  25166283 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 25166184  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  25166183 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 25166132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 25406833 - 25406680
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  25406833 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 25406734  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | ||| ||| ||||||||||||||||||    
T  25406733 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 25406680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 34294250 - 34294403
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||| |||||||| |||||||| |||||||   ||||||||||||||||||||||||||| |||||||||||| ||     
T  34294250 catacctagtattgattaggaatgaatttaggatcacagggaacccagaacaagcttagtttgggagttgagtggtactcgccgtggcgagtaagtactc 34294349  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  34294350 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 34294403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 22133406 - 22133253
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||||||| |||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  22133406 catacctagtattgattaggaatgaatgtatgatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 22133307  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | ||| ||| ||||||||||||||||||    
T  22133306 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 22133253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 22140098 - 22139945
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||||||| |||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  22140098 catacctagtattgattaggaatgaatgtatgatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 22139999  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | ||| ||| ||||||||||||||||||    
T  22139998 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 22139945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 238
Target Start/End: Original strand, 41294136 - 41294285
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  || ||||    
T  41294136 cctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactctcgc 41294235  T
Q  189 ttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
     ||| ||| |||||  ||||| | ||| ||| ||||||||||||||||||    
T  41294236 ctcgcgagcacaacttgaatgtagttgcttgagtgtttgtgcgatctgtg 41294285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 89 - 236
Target Start/End: Original strand, 22327865 - 22328012
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   || ||||||||||||||||||||||||||||||||||||  |||||||    
T  22327865 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactttcgc 22327964  T
Q  189 ttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctg 236  Q
     ||| ||| ||| |||| ||| | ||| | ||||||||||||||||||    
T  22327965 ctcgcgagcacagccaggatgcagttgctggtgtgtttgtgcgatctg 22328012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 22588502 - 22588349
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||||||||||| |||||||||||||||| ||||||||||  ||     
T  22588502 catacctagtattgattaggaatgaatgtaggatcagattgaactcagaacaacactagtttgggagatgagtggtactcgccaaggcgagtaagaactc 22588403  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| |||  || |||||||||||| | ||| ||| ||||||||||||||||||    
T  22588402 tcgcctcgcaagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 22588349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 17284474 - 17284321
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| || |||||||||||||||||||||||||||  ||     
T  17284474 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 17284375  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||||||| |||  |  || ||| ||||||||||||||||||    
T  17284374 tcgcctcgcgagcacaaccataatttagatgcttgagtgtttgtgcgatctgtg 17284321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 19992287 - 19992138
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||   || ||||||||||||||||||||||||||||||||||||  || ||||    
T  19992287 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactctcgc 19992188  T
Q  189 ttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
     ||| ||| ||| |||| ||| | ||| ||||||||| ||||||||||||    
T  19992187 ctcgcgagcacagccaggatgcagttgcttgtgtgttggtgcgatctgtg 19992138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 40707529 - 40707408
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||| ||||||||||||||||||  ||     
T  40707529 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactc 40707430  T
Q  185 tcgcttcgggagtacaaccaga 206  Q
    |||| ||| |||||||||||||    
T  40707429 tcgcctcgcgagtacaaccaga 40707408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 40714171 - 40714050
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||| ||||||||||||||||||  ||     
T  40714171 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactc 40714072  T
Q  185 tcgcttcgggagtacaaccaga 206  Q
    |||| ||| |||||||||||||    
T  40714071 tcgcctcgcgagtacaaccaga 40714050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 236
Target Start/End: Original strand, 22334519 - 22334666
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||   || ||||||||||||||||||||||||||||||||||||  || ||||    
T  22334519 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactatcgc 22334618  T
Q  189 ttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctg 236  Q
     ||| ||| ||| |||| ||| | ||| | ||||||||||||||||||    
T  22334619 ctcgcgagcacagccaggatgcagttgctggtgtgtttgtgcgatctg 22334666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 29477652 - 29477805
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| | ||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  29477652 catacctagttttgattaggaatgaatgtaggatcagattgaacccataacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 29477751  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||||| |||||  |  || ||| ||||||||||||||||||    
T  29477752 tcgcctcgcgagcacaactagaatttagatgcttgagtgtttgtgcgatctgtg 29477805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 29471057 - 29471210
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| | |||||||||||||||| || |||||||||||||||||||||||||||  ||     
T  29471057 catacctagttttgattaggaatgaatgtaggatcagattgaacccataacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 29471156  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||||| |||||  |  || ||| ||||||||||||||||||    
T  29471157 tcgcctcgcgagcacaactagaatttagatgcttgagtgtttgtgcgatctgtg 29471210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 15236478 - 15236601
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| |||||||||||||||||| || |||||||||||||||||||||||||||  ||     
T  15236478 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 15236577  T
Q  185 tcgcttcgggagtacaaccagaat 208  Q
    |||| ||| ||| ||| |||||||    
T  15236578 tcgcctcgcgagcacatccagaat 15236601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 27517155 - 27517039
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||   ||| |||||||||||||||| ||||||||||||||||||  || ||||    
T  27517155 cctagtattgattaggaatgaatgtaggatcagaggaaacccagaacaagcttag-ttgggagttgagtggtgctcgccatggcgagtaaggactctcgc 27517057  T
Q  189 ttcgggagtacaaccaga 206  Q
     ||| |||||||||||||    
T  27517056 ctcgcgagtacaaccaga 27517039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 27523792 - 27523676
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||   ||| |||||||||||||||| ||||||||||||||||||  || ||||    
T  27523792 cctagtattgattaggaatgaatgtaggatcagaggaaacccagaacaagcttag-ttgggagttgagtggtgctcgccatggcgagtaaggactctcgc 27523694  T
Q  189 ttcgggagtacaaccaga 206  Q
     ||| |||||||||||||    
T  27523693 ctcgcgagtacaaccaga 27523676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 37544450 - 37544296
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagt-tgagtggtactcgccatggcgagtaagtgct 183  Q
    ||||||||||||||||||||||||| | |||||   ||  ||||| |||||||||  ||||||||||  | |||| ||||||||||||||||||||| ||    
T  37544450 catacctagtattgattaggaatgattttaggacaggattgaacccagaacaacatcagtttgggagaatcagtgttactcgccatggcgagtaagtact 37544351  T
Q  184 ttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
     |||| ||| |||||||||||||||| | ||| ||| ||||||||||||||||||    
T  37544350 ctcgcctcgcgagtacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 37544296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 33726227 - 33726114
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| |||     
T  33726227 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgg 33726128  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  33726127 ttgtgcgatctgtg 33726114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 21294961 - 21295114
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||  | ||     
T  21294961 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 21295060  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||  ||||| || | |  |||| ||||||||||||||||||    
T  21295061 tcgcctcgcgagcacttccagattggagtgctttgagtgtttgtgcgatctgtg 21295114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 25535396 - 25535243
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||  | ||     
T  25535396 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 25535297  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||  ||||| || | |  |||| ||||||||||||||||||    
T  25535296 tcgcctcgcgagcacttccagattggagtgctttgagtgtttgtgcgatctgtg 25535243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 14359517 - 14359609
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||   ||  ||||||||||||||| | |||||| | |||| |||||||||||||||||||||    
T  14359517 catacctagtaatgattaggaatgaatgtaggacatgattgaacctagaacaacattggtttggaatttgactggtactcgccatggcgagta 14359609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 23336986 - 23337078
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| | ||||||  |||||||| | |||| |||||||||||||||||||||    
T  23336986 catacctagtaatgattaggaatgaatgtaggacaagattgaacccataacaactttagtttggaaattgaatggtactcgccatggcgagta 23337078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 24554940 - 24554849
Alignment:
Q  86 atacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    |||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||| ||||||||||    
T  24554940 atacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggctagtactcgcaatggcgagta 24554849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 15441652 - 15441744
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| | ||||||| ||||| ||||||||  | | |||||||||||||||||    
T  15441652 catacctagtaatgattaggaatgaatgtaggacaagattgaacccataacaacattagttggggagttggcttgaactcgccatggcgagta 15441744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 22325624 - 22325718
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| ||| |||| ||||||||||||  |||  ||||| |||||| || |||||||| | |||  | |||||||||||||||||||||    
T  22325624 catacctagtaatgaatagggatgaatgtaggaaaagattgaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaag 22325718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 1700701 - 1700671
Alignment:
Q  1 gctgctcgaattggctgccatacaatgataa 31  Q
    |||||||||||||||||||||||||||||||    
T  1700701 gctgctcgaattggctgccatacaatgataa 1700671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 21667552 - 21667657
Alignment:
Q  133 aacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 232  Q
    ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| ||| ||||||||    
T  21667552 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtgattgtgcga 21667651  T
Q  233 tctgtg 238  Q
    ||||||    
T  21667652 tctgtg 21667657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 29316778 - 29316673
Alignment:
Q  133 aacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 232  Q
    ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| ||| ||||||||    
T  29316778 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtggttgtgcga 29316679  T
Q  233 tctgtg 238  Q
    ||||||    
T  29316678 tctgtg 29316673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 3e-60; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 8048194 - 8048343
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  8048194 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 8048293  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatc 234  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||    
T  8048294 tcgcctcgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatc 8048343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 8054807 - 8054956
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  8054807 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 8054906  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatc 234  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||    
T  8054907 tcgcctcgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatc 8054956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 19779988 - 19780141
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  19779988 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 19780087  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  19780088 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 19780141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 4772504 - 4772351
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  4772504 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 4772405  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||  | |||||||||||||||||||    
T  4772404 tcgcctcgcgagtacaaccaggatgaacttggctatgtgtttgtgcgatctgtg 4772351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 17962023 - 17962176
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  17962023 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 17962122  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||||| |||| ||||||| |||||||||||    
T  17962123 tcgcctcgcgagtacaaccaggatgaactcgtttatgtgtttatgcgatctgtg 17962176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 22195027 - 22194874
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||||||||||||| |||     
T  22195027 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 22194928  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  22194927 tcgcctcgcgagtacaaccaggatgaacttgattttgtgtttgtgcgatctgtg 22194874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 36884433 - 36884586
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||||||||||||| |||     
T  36884433 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 36884532  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  36884533 tcgcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 36884586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 15148863 - 15148710
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||| ||  ||||||||||||||||||||||||||||||||||||||| |||     
T  15148863 catacctagtattgattaggaatgaatgtaggatcagagggaacccaaaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 15148764  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  15148763 tcgcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 15148710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 15362540 - 15362387
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||||||||||||| |||     
T  15362540 catacctagtattgattaggaatgaatgtaggatcagagggaaccgagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 15362441  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||||||| || |||| ||||||||||||||    
T  15362440 tcgcctcgcgagtacaaccaggatgaacttgattatgtgcttgtgcgatctgtg 15362387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 15383192 - 15383345
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||||||||||||| |||     
T  15383192 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 15383291  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||||||| |||| ||||||||| || |||||||||||||||||||    
T  15383292 tcgcctcgcgagtacagccaggatgaacttgattatgtgtttgtgcgatctgtg 15383345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 20115550 - 20115397
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||||||||||||||||  ||     
T  20115550 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaactttagtttgggagatgagtggtactcgccatggcgagtaagaactc 20115451  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| ||||| ||| ||||||||||||||||||    
T  20115450 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 20115397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 29040599 - 29040750
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  29040599 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 29040698  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  29040699 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 29040750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 7900869 - 7901022
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  7900869 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 7900968  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| | ||| ||| ||||||||||||||||||    
T  7900969 tcgcctcgcgagtacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 7901022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 12475427 - 12475274
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| ||     
T  12475427 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactc 12475328  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  12475327 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 12475274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 12482057 - 12481904
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| ||     
T  12482057 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactc 12481958  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  12481957 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 12481904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 16231540 - 16231693
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||||||||||||| |||     
T  16231540 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 16231639  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||||| | |||| ||||||||| || |||||||||||||||||||    
T  16231640 tcgcctcgcgagtatagccaggatgaacttgattatgtgtttgtgcgatctgtg 16231693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 18024126 - 18024279
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||   |||||||||||||||||||||||||| ||||||||||||| ||     
T  18024126 catacctagtattgattaggaatgaatttaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgcgatggcgagtaagtactc 18024225  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  18024226 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 18024279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 23954555 - 23954402
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||  |     
T  23954555 catacctagcattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtacttgccatggcgagtaagttatc 23954456  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  23954455 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 23954402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 23961217 - 23961064
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||  |     
T  23961217 catacctagcattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtacttgccatggcgagtaagttatc 23961118  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  23961117 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 23961064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 8385240 - 8385089
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  8385240 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 8385141  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  8385140 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 8385089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 8391895 - 8391744
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  8391895 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 8391796  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  8391795 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 8391744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 14074236 - 14074085
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  14074236 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 14074137  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  14074136 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 14074085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 15257014 - 15256863
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  15257014 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 15256915  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  15256914 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 15256863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 17808819 - 17808668
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  17808819 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 17808720  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  17808719 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 17808668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 15321792 - 15321945
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||     
T  15321792 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactc 15321891  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | ||| ||| |||||| |||||||||||    
T  15321892 tcgcctcgcgagcacaaccagaatgtaattgcttgagtgtttatgcgatctgtg 15321945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 51493516 - 51493669
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  51493516 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 51493615  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | ||| ||| ||||||||||||||||||    
T  51493616 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 51493669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 17089678 - 17089829
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||| ||||||| ||||||||||||||||||| || ||    
T  17089678 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagtggagtggtgctcgccatggcgagtaagtactctc 17089777  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  17089778 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 17089829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 40471882 - 40471729
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  40471882 catacctagtattgattaggaatgaatgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 40471783  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||  |  || ||| ||||||||||||||||||    
T  40471782 tcgcctcgcgagcacaaccagaatttagatgcttgagtgtttgtgcgatctgtg 40471729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 6873074 - 6873227
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  6873074 catacctagtattgattatgaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 6873173  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | ||| ||| ||||||||||| ||||||    
T  6873174 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgttctgtg 6873227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 14268156 - 14268309
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||||| ||||||||||  |||    
T  14268156 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactt 14268255  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||| |||| ||| | ||| ||| ||||||||||||||||||    
T  14268256 tcgcctcgcgagcacagccaggatgtagttgcttgagtgtttgtgcgatctgtg 14268309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 26284606 - 26284759
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  26284606 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 26284705  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||  |  || ||| ||||||||||||||||||    
T  26284706 tcgcctcgcgagcacaaccagaatttagatgcttgagtgtttgtgcgatctgtg 26284759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 40478555 - 40478402
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  40478555 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 40478456  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||  |  || ||| ||||||||||||||||||    
T  40478455 tcgcctcgcgagcacaaccagaatttagatgcttgagtgtttgtgcgatctgtg 40478402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 14298526 - 14298679
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||   || ||||||||||||||||||||||||||||||||||||  ||     
T  14298526 catacctagtattgattaggaatgaatgtaagatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactc 14298625  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||| |||| ||| | ||| ||||||||| ||||||||||||    
T  14298626 tcgcctcgcgagcacagccaggatgcagttgcttgtgtgttggtgcgatctgtg 14298679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 18296033 - 18295912
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||| ||||||||||||||||||  ||     
T  18296033 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactc 18295934  T
Q  185 tcgcttcgggagtacaaccaga 206  Q
    |||| ||| |||||||||||||    
T  18295933 tcgcctcgcgagtacaaccaga 18295912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 208
Target Start/End: Complemental strand, 17810680 - 17810557
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  17810680 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 17810581  T
Q  185 tcgcttcgggagtacaaccagaat 208  Q
    |||| ||| ||| ||| |||||||    
T  17810580 tcgcctcgcgagcacatccagaat 17810557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 14757120 - 14757214
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||||| ||||||| ||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14757120 catacctagtattaattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaag 14757214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 14305150 - 14305303
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| |||||||   || ||||||||||||||||||||||||||||| ||||||  ||     
T  14305150 catacctagcattgattaggaatgaatgtaagatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcaagtaagaactc 14305249  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||| |||| ||| | ||| ||||||||| ||||||| ||||    
T  14305250 tcgcctcgcgagcacagccaggatgcagttgcttgtgtgttggtgcgatatgtg 14305303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 386052 - 386134
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgcc 167  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||    
T  386052 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgcc 386134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 18071536 - 18071423
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| ||||||||| ||||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  18071536 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 18071437  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  18071436 ttgtgcgatctgtg 18071423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 35171036 - 35170944
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| |||||||| | |||| |||||||||||||||||||||    
T  35171036 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagtttggaaattgactggtactcgccatggcgagta 35170944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 17991367 - 17991430
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgg 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||    
T  17991367 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgg 17991430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 12522492 - 12522406
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatgg 171  Q
    ||||||||||| |||||||||||||||||||||  ||| |||||||||||||||| ||||| ||||||||  | |||||||||||||    
T  12522492 catacctagtaatgattaggaatgaatgtaggacaagatggaacctagaacaacattagttggggagttggcttgtactcgccatgg 12522406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 23838841 - 23838688
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||  | ||     
T  23838841 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 23838742  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||  ||||| || | |  |||| ||||||||||||||||||    
T  23838741 tcgcctcgcgagcacttccagattggagtgctttgagtgtttgtgcgatctgtg 23838688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 14685579 - 14685487
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||| |||  ||||||||||||||| || || || |||||  | |||||||||||||||||||    
T  14685579 catacctagtaatgattaggaatgaatgtaggataagattgaacctagaacaacattatttgggaagttggcttgtactcgccatggcgagta 14685487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 9271802 - 9271926
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| ||| |||| ||||||||||||  ||   ||||| ||||||||  |||||||||| ||||||||||||||||||||||||| ||  ||     
T  9271802 catacctagtaatgaatagggatgaatgtaggacaagcctgaacccagaacaactttagtttgggatttgagtggtactcgccatggcgagtgagaactc 9271901  T
Q  185 tcgcttcgggagtacaaccagaatg 209  Q
    |||| ||| |||||  |||||||||    
T  9271902 tcgcctcgcgagtatgaccagaatg 9271926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 14679370 - 14679278
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||  || |||||  | |||||||||||||||||||    
T  14679370 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagtagggaagttggcttgtactcgccatggcgagta 14679278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 41385443 - 41385535
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| ||||||||| |||||||||||  |||  ||||||||||||||| ||||| || ||||   | |||||||||||||||||||    
T  41385443 catacctagtaatgattaggagtgaatgtaggacaagattgaacctagaacaacattagttgggaagttcgcttgtactcgccatggcgagta 41385535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 30234876 - 30234970
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||| | || |||||||||  |||  | ||| ||||||||  |||||||||| |||  |||||||||||||||||||||||    
T  30234876 catacctagtaatgattatggattaatgtaggacaagattggacccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 30234970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 53433785 - 53433691
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||  |||   |||| |||||| || |||||||| | |||  | |||||||||||||||||||||    
T  53433785 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaag 53433691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 12349320 - 12349425
Alignment:
Q  133 aacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 232  Q
    ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| ||| ||||||||    
T  12349320 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtggttgtgcga 12349419  T
Q  233 tctgtg 238  Q
    ||||||    
T  12349420 tctgtg 12349425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 3e-60; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 31422250 - 31422403
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||     
T  31422250 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagtactc 31422349  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  31422350 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 31422403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 10845981 - 10846133
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  || ||||||||||||||||||||||||||||||||||||| ||     
T  10845981 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttaatttgggagttgagtggtactcgccatggcgagtaagtactc 10846080  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  10846081 tcgcctcgcgagtacaaccagaatgaacttgtttgtgtg-ttgtgcgatctgtg 10846133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 37615800 - 37615647
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  37615800 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 37615701  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  37615700 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 37615647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 26788502 - 26788655
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  26788502 catacctagtattggttaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 26788601  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  26788602 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 26788655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 26794092 - 26794245
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  26794092 catacctagtattggttaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 26794191  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  26794192 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 26794245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 26889864 - 26889711
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||||||||||||| |||     
T  26889864 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 26889765  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  26889764 tcgcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 26889711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 6599127 - 6598974
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| |||||| ||||||||||||||||||||| ||     
T  6599127 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagatgagtgttactcgccatggcgagtaagtactc 6599028  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||||||| |||||||    
T  6599027 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttgtgcaatctgtg 6598974  T

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Target: chr3; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 6605807 - 6605654
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| |||||| ||||||||||||||||||||| ||     
T  6605807 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagatgagtgttactcgccatggcgagtaagtactc 6605708  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||||||| |||||||    
T  6605707 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttgtgcaatctgtg 6605654  T

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Target: chr3; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 10153432 - 10153585
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||||| ||||||||||  ||     
T  10153432 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactc 10153531  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||| ||||||||||||||||||||||||||||||||    
T  10153532 tcgcctcgcgagcacaaccaggatgaacttgtttgtgtgtttgtgcgatctgtg 10153585  T

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Target: chr3; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 16623752 - 16623905
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||||||||||||||||| ||     
T  16623752 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccatggcgagtaagtactc 16623851  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| | ||| ||| ||||||||||||||||||    
T  16623852 tcgcctcgcgagtacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 16623905  T

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Target: chr3; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 16634258 - 16634107
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  16634258 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 16634159  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  16634158 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 16634107  T

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Target: chr3; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 16640868 - 16640717
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  16640868 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 16640769  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  16640768 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 16640717  T

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Target: chr3; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 43161533 - 43161382
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  43161533 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 43161434  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  43161433 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 43161382  T

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Target: chr3; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 43167770 - 43167619
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  43167770 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 43167671  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  43167670 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 43167619  T

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Target: chr3; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 418409 - 418256
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| ||     
T  418409 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactc 418310  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  418309 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 418256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 14672897 - 14673050
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||   |||||||||||||||||||||||||| ||||||||||||| ||     
T  14672897 catacctagtattgattaggaatgaatttaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgcgatggcgagtaagtactc 14672996  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  14672997 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 14673050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 16489367 - 16489520
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||||| ||||||||||  ||     
T  16489367 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaactttagtttgggagatgagtggtactcgccacggcgagtaagaactc 16489466  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| ||||| ||| ||||||||||||||||||    
T  16489467 tcgcctcgcgagtacaaccagaatgtacttgcttgagtgtttgtgcgatctgtg 16489520  T

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Target: chr3; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 5106581 - 5106734
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||  ||||||||||| |||||| ||||||||||||||||||||| ||     
T  5106581 catacctagtattgattaggaatgaatgtaggatcagagggagcccagaacaaccttagtttgggagatgagtgttactcgccatggcgagtaagtactc 5106680  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||||||||| || |||||||||||| ||||||| |||||||||||    
T  5106681 tcgcctcgcgagtacaactaggatgaacttgtttatgtgtttatgcgatctgtg 5106734  T

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Target: chr3; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 48423777 - 48423624
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    |||||| |||||||||||| ||||||||||||||||||| ||     
T  48423777 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagctcagtttgtgagttgagtggtgctcgccatggcgagtaagtactc 48423678  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  48423677 tcgcctcgcgagtacaaccaggatgaacttgcttatgtgtttgtgcgatctgtg 48423624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 48430555 - 48430402
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    |||||| |||||||||||| ||||||||||||||||||| ||     
T  48430555 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagctcagtttgtgagttgagtggtgctcgccatggcgagtaagtactc 48430456  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  48430455 tcgcctcgcgagtacaaccaggatgaacttgcttatgtgtttgtgcgatctgtg 48430402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 53380049 - 53380201
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| | ||||||  |||||||| ||||||||||||||||||||||||||||||  ||     
T  53380049 catacctagtattgattaggaatgaatgtaggatcagaggggacccataacaaccttagtttggaagttgagtggtactcgccatggcgagtaaggactc 53380148  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| | |||||| |||||||||||||||||||| |||||||||||||||    
T  53380149 tcgcctcgcgggtacaatcagaatgaacttgtttgtgt-tttgtgcgatctgtg 53380201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 53386701 - 53386853
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| | ||||||  |||||||| ||||||||||||||||||||||||||||||  ||     
T  53386701 catacctagtattgattaggaatgaatgtaggatcagaggggacccataacaaccttagtttggaagttgagtggtactcgccatggcgagtaaggactc 53386800  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| | |||||| |||||||||||||||||||| |||||||||||||||    
T  53386801 tcgcctcgcgggtacaatcagaatgaacttgtttgtgt-tttgtgcgatctgtg 53386853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 1332760 - 1332910
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||| | |||||||||||| ||||||||||||||||||| || ||    
T  1332760 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtt-gtgagttgagtggtgctcgccatggcgagtaagtactctc 1332858  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  1332859 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 1332910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 5149665 - 5149818
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||| | ||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  5149665 catacctagtattgattaggaatgaatttgggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 5149764  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | ||| ||| ||||||||||||||||||    
T  5149765 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 5149818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 41201495 - 41201648
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  41201495 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 41201594  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||  |  || ||| ||||||||||||||||||    
T  41201595 tcgcctcgcgagcacaaccagaatttagatgcttgagtgtttgtgcgatctgtg 41201648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 23704466 - 23704619
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| || |||||||||||||||||||||||||||  ||     
T  23704466 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 23704565  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||  |  || ||| ||||||||||||||||||    
T  23704566 tcgcctcgcgagcacaaccagaatttagatgcttgagtgtttgtgcgatctgtg 23704619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 23722922 - 23723075
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| || |||||||||||||||||||||||||||  ||     
T  23722922 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 23723021  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||  |  || ||| ||||||||||||||||||    
T  23723022 tcgcctcgcgagcacaaccagaatttagatgcttgagtgtttgtgcgatctgtg 23723075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 23741378 - 23741531
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| || |||||||||||||||||||||||||||  ||     
T  23741378 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 23741477  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||  |  || ||| ||||||||||||||||||    
T  23741478 tcgcctcgcgagcacaaccagaatttagatgcttgagtgtttgtgcgatctgtg 23741531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 16747538 - 16747689
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||  | || ||||||||  |||||||||||  |||||  |||||||||||||||| |||||| ||    
T  16747538 tacctagtattgattaggaatgaatgtaggatcagagaaagcccagaacaaccttagtttgggagaagagtgtcactcgccatggcgagtgagtgctctc 16747637  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| | |||||||||| |||||||||||||||||||    
T  16747638 gcctcgcgagtacaaccaggacgaacttgtttatgtgtttgtgcgatctgtg 16747689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 15726629 - 15726782
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||||| | |||||||||||||||||||||||||  ||     
T  15726629 catacctagtattgattaggaatgaatgaaggatcagattgaacccagaacaacactagtttgggagataagtggtactcgccatggcgagtaagaactc 15726728  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||  |  || ||| ||||||||||||||||||    
T  15726729 tcgcctcgcgagcacaaccagaatttagatgcttgagtgtttgtgcgatctgtg 15726782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 16758270 - 16758421
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||   | || ||||||||  |||||||||||  |||||  |||||||||||||||| |||||| ||    
T  16758270 tacctagtattgattaggaatgaatgtaggatcagataaagcccagaacaaccttagtttgggagaagagtgtcactcgccatggcgagtgagtgctctc 16758369  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| | |||||||||| |||||||||||||||||||    
T  16758370 gcctcgcgagtacaaccaggacgaacttgtttatgtgtttgtgcgatctgtg 16758421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 5221813 - 5221660
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||||||||||||||||||||| || ||||||||||  ||     
T  5221813 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgacacggcgagtaagaactc 5221714  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||| |||| ||  | ||| ||| ||||||||||||||||||    
T  5221713 tcgcctcgcgagcacagccaggatatagttgcttgagtgtttgtgcgatctgtg 5221660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 208
Target Start/End: Complemental strand, 30066357 - 30066234
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  30066357 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 30066258  T
Q  185 tcgcttcgggagtacaaccagaat 208  Q
    |||| ||| ||| ||| |||||||    
T  30066257 tcgcctcgcgagcacatccagaat 30066234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 14499736 - 14499642
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14499736 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaag 14499642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 15691975 - 15692069
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  15691975 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactctccatggcgagtaag 15692069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 13251124 - 13251007
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||| ||||||||||| ||||||||||||||||||  || ||||    
T  13251124 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttggaagttgagtggtgctcgccatggcgagtaagaactctcgc 13251025  T
Q  189 ttcgggagtacaaccaga 206  Q
     ||| |||||||||||||    
T  13251024 ctcgcgagtacaaccaga 13251007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 13257770 - 13257653
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||| ||||||||||| ||||||||||||||||||  || ||||    
T  13257770 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttggaagttgagtggtgctcgccatggcgagtaagaactctcgc 13257671  T
Q  189 ttcgggagtacaaccaga 206  Q
     ||| |||||||||||||    
T  13257670 ctcgcgagtacaaccaga 13257653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 85 - 208
Target Start/End: Complemental strand, 11070479 - 11070356
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| |||||||||||||||||| || |||||||||||||||||||||||||||  ||     
T  11070479 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 11070380  T
Q  185 tcgcttcgggagtacaaccagaat 208  Q
    |||| ||| ||| ||| |||||||    
T  11070379 tcgcctcgcgagcacatccagaat 11070356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 11165227 - 11165350
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| | ||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  11165227 catacctagtattgattaggattgaatgtaggatcagattgaacccaaaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 11165326  T
Q  185 tcgcttcgggagtacaaccagaat 208  Q
    |||| ||| ||| ||| |||||||    
T  11165327 tcgcctcgcgagcacatccagaat 11165350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 41092048 - 41092135
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagt 176  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  41092048 cctagtattgattaggaatgaatgtaggagcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagt 41092135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 20057100 - 20057253
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||| | |||||   ||  ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||  ||     
T  20057100 catacctagtattgattaggaatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaaggactc 20057199  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| | ||| ||| ||||||||||||||||||    
T  20057200 tcgcctcgcgagtacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 20057253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 20063738 - 20063891
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||| | |||||   ||  ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||  ||     
T  20063738 catacctagtattgattaggaatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaaggactc 20063837  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| | ||| ||| ||||||||||||||||||    
T  20063838 tcgcctcgcgagtacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 20063891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 22643036 - 22643118
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgcc 167  Q
    ||||||||||||||||||||||||||||||||||||||   |||| ||||||||||||||||||||||||||| |||||||||    
T  22643036 catacctagtattgattaggaatgaatgtaggatcagacttaacccagaacaacactagtttgggagttgagttgtactcgcc 22643118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 55023256 - 55023174
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgcc 167  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| |||||||||||||||||| || |||||||||||||||    
T  55023256 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgcc 55023174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 3690988 - 3690875
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  3690988 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 3690889  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  3690888 ttgtgcgatctgtg 3690875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 10904596 - 10904483
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  10904596 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 10904497  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  10904496 ttgtgcgatctgtg 10904483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 10911268 - 10911155
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  10911268 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 10911169  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  10911168 ttgtgcgatctgtg 10911155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 839654 - 839562
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| ||||||||| | | |||||||||||||||||    
T  839654 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttggggagttgacttgaactcgccatggcgagta 839562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 10004006 - 10003893
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| ||||||||   |||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| |||     
T  10004006 gaacccagaacaacttcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgg 10003907  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  10003906 ttgtgcgatctgtg 10003893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 10010653 - 10010540
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| ||||||||   |||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| |||     
T  10010653 gaacccagaacaacttcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgg 10010554  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  10010553 ttgtgcgatctgtg 10010540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 24188185 - 24188032
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||  | ||     
T  24188185 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 24188086  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||  ||||| || | |  |||| ||||||||||||||||||    
T  24188085 tcgcctcgcgagcacttccagattggagtgctttgagtgtttgtgcgatctgtg 24188032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 55149386 - 55149294
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||    
T  55149386 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggattgtactcgccatggcgagta 55149294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 20723409 - 20723256
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || || ||  | |||||||||||||||||||  ||||     
T  20723409 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagctggcttgtactcgccatggcgagtagatgctc 20723310  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||  ||||| || | |   ||| ||||||||||||||||||    
T  20723309 tcgcctcgcgagcacttccagattggagtgcattgagtgtttgtgcgatctgtg 20723256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 13315892 - 13315978
Alignment:
Q  92 agtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaa 178  Q
    |||| ||||||||| ||||||||||   |||  | ||| ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  13315892 agtaatgattaggattgaatgtagggcaagattggacccagaacaacactggtttgggatttgagtggtactcgccatggcgagtaa 13315978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 15826072 - 15825978
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||  |||  | ||| ||||||||  |||||||||| |||  |||||||||||||||||||||||    
T  15826072 catacctagtaatgattagggatgaatgtaggacaagattggacccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 15825978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 7986114 - 7986022
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||| ||||| |||||||||| ||||||| ||  |||  ||||||||||||||| ||||||||||||||  | | |||||||||||||||||    
T  7986114 catacttagtaatgattaggaaggaatgtaagacaagattgaacctagaacaacattagtttgggagttggcttgaactcgccatggcgagta 7986022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 15991801 - 15991895
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||  |||  | ||| | ||||||  |||||||||| |||  |||||||||||||||||||||||    
T  15991801 catacctagtaatgattagggatgaatgtaggacaagattggacccaaaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 15991895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 22670584 - 22670621
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcaga 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22670584 catacctagtattgattaggaatgaatgtaggatcaga 22670621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 28350859 - 28350951
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||  |||||||||||||||||||||  |||  ||||| ||||||||| ||||| ||||||||  |   |||||||||||||||||    
T  28350859 catacctagtgatgattaggaatgaatgtaggacaagattgaacccagaacaacattagttggggagttggcttcaactcgccatggcgagta 28350951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 6608848 - 6608739
Alignment:
Q  125 gaacctagaacaacactagtttgggagtt-gagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtg 223  Q
    ||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||||||  || |||| ||| ||| |   |||||||| | |  ||||||||    
T  6608848 gaacccagaacaacattagtt-gggagtttgagtggtactcgccatggcgagtaaggactctcgcctcgcgagcaagtccagaatgtagtgttttgtgtg 6608750  T
Q  224 tttgtgcgatc 234  Q
    |||||||||||    
T  6608749 tttgtgcgatc 6608739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 10236092 - 10236185
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| ||||||||| |||||||||||  |||  | ||| ||||||||  ||||||||||  ||  |||||||||||||||||||||||    
T  10236092 catacctagtaatgattagga-tgaatgtaggacaagattggacccagaacaactttagtttgggaaatgtttggtactcgccatggcgagtaag 10236185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 12891814 - 12891720
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||  |||   |||| |||||| || |||||||| | |||  | |||||||||||||||||||||    
T  12891814 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaag 12891720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 17252754 - 17252848
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||  |||   |||| |||||| || |||||||| | |||  | |||||||||||||||||||||    
T  17252754 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaag 17252848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 19809437 - 19809343
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| ||||||||| ||||||||||   ||   | ||| ||||||||  |||||||||| |||  |||||||||||||||||||||||    
T  19809437 catacctagtaatgattaggattgaatgtagggcaaggttggacccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 19809343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 4710661 - 4710616
Alignment:
Q  131 agaacaacactagtttgggagttgagtggtactcgccatggcgagt 176  Q
    ||||||||  |||||||||| |||||||||||||||||||||||||    
T  4710661 agaacaactttagtttgggatttgagtggtactcgccatggcgagt 4710616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 12482789 - 12482684
Alignment:
Q  133 aacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 232  Q
    ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| ||| ||||||||    
T  12482789 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtggttgtgcga 12482690  T
Q  233 tctgtg 238  Q
    ||||||    
T  12482689 tctgtg 12482684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 114; Significance: 6e-58; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 30935 - 30782
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  30935 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 30836  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  30835 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 30782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 72596 - 72749
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  72596 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 72695  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  72696 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 72749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 8467 - 8314
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||  |||||||||||||||||||||||||||||  ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||  ||     
T  8467 catacctgatattgattaggaatgaatgtaggatcagattgaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 8368  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||  ||| |||||||||||  |  || ||| |||||||||| |||||||    
T  8367 tcgcctcacgagcacaaccagaatttagatgcttgagtgtttgtgcaatctgtg 8314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 6e-58; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 17669268 - 17669421
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  17669268 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 17669367  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  17669368 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 17669421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 17675920 - 17676073
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  17675920 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 17676019  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  17676020 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 17676073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 5534137 - 5534290
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||| ||||||||||||||||||| ||     
T  5534137 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactc 5534236  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  5534237 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 5534290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 20019638 - 20019787
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  20019638 catagctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 20019737  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatc 234  Q
    |||| | | |||||||||||| ||||||||||||||||||||||||||||    
T  20019738 tcgccttgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatc 20019787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 21915268 - 21915421
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||| ||||||||||||||||||| ||     
T  21915268 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactc 21915367  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  21915368 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 21915421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 22084239 - 22084086
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||| |||||||||||||||||||||| |||     
T  22084239 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgaggggtactcgccatggcgagtaagagctc 22084140  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  22084139 tcgcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 22084086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 22123083 - 22123236
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||||||||||||  ||     
T  22123083 catacctagtattgattaggaatgaatgtaagatcagagggaacccagaacaacattagtttgggagatgagtggtactctccatggcgagtaagaactc 22123182  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  22123183 tcgcctcgcgagtacaaccagaatgtacttgtttgagtgtttgtgcgatctgtg 22123236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 20013562 - 20013710
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  20013562 catagctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 20013661  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatc 234  Q
    |||| | | |||||||||||| ||||||||||||||||| ||||||||||    
T  20013662 tcgccttgcgagtacaaccaggatgaacttgtttgtgtg-ttgtgcgatc 20013710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 28455167 - 28455014
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    |||||| |||||||||||| ||||||||||||||||||| ||     
T  28455167 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagctcagtttgtgagttgagtggtgctcgccatggcgagtaagtactc 28455068  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| |||||||||||||||| ||||||||| || |||||||||||||||||||    
T  28455067 tcgcctcgggagtacaaccaggatgaacttgcttatgtgtttgtgcgatctgtg 28455014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 16882870 - 16883023
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||  |||    
T  16882870 catacctagtattgattaggaatgaatgtagaatcagattgaacccagaacaacactagtttgggagatgagcggtactcgccatggcgagtaagaactt 16882969  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | ||| ||| ||||||||||||||||||    
T  16882970 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 16883023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 18865739 - 18865586
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  18865739 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 18865640  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | ||| ||| ||||||||||| ||||||    
T  18865639 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgttctgtg 18865586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 18855344 - 18855191
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||| ||||||||||||||||||||||||||||||||  ||||| |||||||||||||| |||||| |||||||||||||||||||||||||||  ||     
T  18855344 catacgtagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtgtgggagatgagtggtactcgccatggcgagtaagaactc 18855245  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | ||| ||| ||||||||||||||||||    
T  18855244 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 18855191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 29123493 - 29123340
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| || |||||||||||||||||||||||||||  ||     
T  29123493 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactc 29123394  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||  |  || ||| ||||||||||||||||||    
T  29123393 tcgcctcgcgagcacaaccagaatttagatgcttgagtgtttgtgcgatctgtg 29123340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 8354461 - 8354614
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||||||||||||||||| |||||| ||||||||||  ||     
T  8354461 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtattcgccacggcgagtaagaactc 8354560  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||| |||| ||| | ||| ||||| ||||||||||||||||    
T  8354561 tcgcctcgcgagcacagccaggatgtagttgcttgtgagtttgtgcgatctgtg 8354614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 19111630 - 19111513
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||| ||||||||||||||||||  || ||||    
T  19111630 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgc 19111531  T
Q  189 ttcgggagtacaaccaga 206  Q
     ||| |||||||||||||    
T  19111530 ctcgcgagtacaaccaga 19111513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 19117921 - 19117804
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||| ||||||||||||||||||  || ||||    
T  19117921 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgc 19117822  T
Q  189 ttcgggagtacaaccaga 206  Q
     ||| |||||||||||||    
T  19117821 ctcgcgagtacaaccaga 19117804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 22115418 - 22115509
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagt 176  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  22115418 catacctagtattgattgggaatgaatgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagt 22115509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 19496758 - 19496645
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  19496758 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 19496659  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  19496658 ttgtgcgatctgtg 19496645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 22048354 - 22048201
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||| |||| | |||||   ||  ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| ||     
T  22048354 catacctagtattgattagggatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 22048255  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||||| |||||||| | | ||| ||| ||||||||||||||||||    
T  22048254 tcgcctcgcgagtataaccagaaggtagttgcttgagtgtttgtgcgatctgtg 22048201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 22122120 - 22122195
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggt 160  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||    
T  22122120 catacctagtattgaattggaatgaatgtaggatcagagggaacccagaacaacattagtttgggagatgagtggt 22122195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 19905901 - 19905812
Alignment:
Q  88 acctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    |||||||| |||||||||||||||||||||  |||  |||||||||||| || |||||||| | |||| |||||||||||||||||||||    
T  19905901 acctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaccattagtttggaaattgactggtactcgccatggcgagta 19905812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 20527857 - 20527704
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||  | ||     
T  20527857 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 20527758  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||  ||||| || | |  |||| ||||||||||||||||||    
T  20527757 tcgcctcgcgagcacttccagattggagtgctttgagtgtttgtgcgatctgtg 20527704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 26934874 - 26934968
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||  |||   |||| |||||| || |||||||| | |||  | |||||||||||||||||||||    
T  26934874 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaag 26934968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 20023626 - 20023713
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggc 172  Q
    ||||||||||| |||||||||||||||||||| | |||    ||| ||||||||  |||||||||| |||  | ||||||||||||||    
T  20023626 catacctagtaatgattaggaatgaatgtagggtaagattagacccagaacaactttagtttgggaattgtttagtactcgccatggc 20023713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 6e-58; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 24913662 - 24913815
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||  ||     
T  24913662 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacactagtttgggagttgagtggtactcgccgtggcgagtaagaactc 24913761  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||||| ||| ||||||||||||||||||||||    
T  24913762 tcgcctcgcgagcacaaccagaatgaagttgcttgtgtgtttgtgcgatctgtg 24913815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 26877266 - 26877419
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  26877266 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 26877365  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  26877366 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 26877419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 22320684 - 22320837
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  22320684 catacctagcattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 22320783  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  22320784 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 22320837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 22326837 - 22326990
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  22326837 catacctagcattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 22326936  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  22326937 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 22326990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 27216474 - 27216321
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||||||||||||||||||||||||||||||||| ||     
T  27216474 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 27216375  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  27216374 tcgcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 27216321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 9340689 - 9340538
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  9340689 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 9340590  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  9340589 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 9340538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 9489323 - 9489172
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  9489323 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 9489224  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  9489223 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 9489172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 9608584 - 9608433
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  9608584 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 9608485  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  9608484 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 9608433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 23171442 - 23171293
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||  || ||||    
T  23171442 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacactaatttgggagttgagtggtactcgccatggcgagtaagaactctcgc 23171343  T
Q  189 ttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
     ||| ||| |||||||||||| | ||| ||| ||||||||||||||||||    
T  23171342 ctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 23171293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 23582699 - 23582550
Alignment:
Q  89 cctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgc 188  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||  || ||||    
T  23582699 cctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacactaatttgggagttgagtggtactcgccatggcgagtaagaactctcgc 23582600  T
Q  189 ttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
     ||| ||| |||||||||||| | ||| ||| ||||||||||||||||||    
T  23582599 ctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 23582550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 13306289 - 13306440
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  13306289 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 13306388  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  13306389 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 13306440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 16986350 - 16986199
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  16986350 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 16986251  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  16986250 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 16986199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 28431612 - 28431763
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  28431612 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 28431711  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  28431712 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 28431763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 12829478 - 12829325
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  12829478 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 12829379  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | ||| ||| ||||||||||||||||||    
T  12829378 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 12829325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 1843491 - 1843338
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||   || ||||||||||||||||||||||||||||||||| ||  ||     
T  1843491 catacctagtattgattaggaatgaatgtaagatcagagggaacctagaacaagtttattttgggagttgagtggtactcgccatggcgagtgagaactc 1843392  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||||||| ||| |||||||| ||| | ||| ||||||||| ||||||||||||    
T  1843391 tcgcttcgcgagcacaaccaggatgcagttgcttgtgtgttggtgcgatctgtg 1843338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 19489624 - 19489771
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||| ||||||| |||| ||||||||||||||||| | |||||   |||||||||||||||||||||||||||||||||||||||| || ||    
T  19489624 tacctagtattgtttaggaacgaatttaggatcagagggaacccataacaagcttagtttgggagttgagtggtactcgccatggcgagtaagtactctc 19489723  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatc 234  Q
    || ||| |||||||||||| |||||||||||| ||||||| |||||||    
T  19489724 gcctcgcgagtacaaccaggatgaacttgtttatgtgtttttgcgatc 19489771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 27599672 - 27599519
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||   || ||||||||||||||||||||||||||||||||||||  ||     
T  27599672 catacctagtattgattaggaatgaatgtaagatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactc 27599573  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||| |||| ||| | ||| ||||||||||||||||||||||    
T  27599572 tcgcctcgcgagcacagccaggatgcagttgcttgtgtgtttgtgcgatctgtg 27599519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 27617704 - 27617551
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||||| ||||||||||  ||     
T  27617704 catacctagcattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactc 27617605  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| | ||   || ||||||||||||||||||    
T  27617604 tcgcctcgcgagtacaaccagaatgtagtttcctgagtgtttgtgcgatctgtg 27617551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 29233937 - 29233784
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||||| | ||||||||  ||     
T  29233937 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacgacgagtaagaactc 29233838  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||| ||| | ||| ||||| ||||||||||||||||    
T  29233837 tcgcctcgcgagcacaaccaggatgtagttgcttgtgagtttgtgcgatctgtg 29233784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 29347236 - 29347083
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||||| | ||||||||  ||     
T  29347236 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacgacgagtaagaactc 29347137  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||| ||| | ||| ||||| ||||||||||||||||    
T  29347136 tcgcctcgcgagcacaaccaggatgtagttgcttgtgagtttgtgcgatctgtg 29347083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 16997458 - 16997337
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||   |||||||||||||||||||| ||||||||||||||||||  ||     
T  16997458 catacctagtattgattaggaatgaatgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactc 16997359  T
Q  185 tcgcttcgggagtacaaccaga 206  Q
    |||| ||| |||||||||||||    
T  16997358 tcgcctcgcgagtacaaccaga 16997337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 10101343 - 10101466
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  10101343 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 10101442  T
Q  185 tcgcttcgggagtacaaccagaat 208  Q
    |||| ||| ||| ||| |||||||    
T  10101443 tcgcctcgcgagcacatccagaat 10101466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 17004091 - 17003970
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| |||||||   |||||||||||||||||||| ||||||||||||||||||  ||     
T  17004091 catacctaatattgattaggaatgaatgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactc 17003992  T
Q  185 tcgcttcgggagtacaaccaga 206  Q
    |||| ||| |||||||||||||    
T  17003991 tcgcctcgcgagtacaaccaga 17003970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 118 - 238
Target Start/End: Complemental strand, 16922907 - 16922787
Alignment:
Q  118 tcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtt 217  Q
    |||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||||||| |    
T  16922907 tcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgat 16922808  T
Q  218 tgtgtgtttgtgcgatctgtg 238  Q
    | |||||||||||||||||||    
T  16922807 tatgtgtttgtgcgatctgtg 16922787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 27197293 - 27197201
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  |||||||||||| || |||||||| | |||| |||||||||||||||||||||    
T  27197293 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaccattagtttggaaattgactggtactcgccatggcgagta 27197201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 10866740 - 10866627
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||| | | ||| ||| ||||    
T  10866740 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaaggtagttgcttgagtgt 10866641  T
Q  225 ttgtgcgatctgtg 238  Q
    ||| ||||||||||    
T  10866640 ttgcgcgatctgtg 10866627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 10873907 - 10873794
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||| | | ||| ||| ||||    
T  10873907 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaaggtagttgcttgagtgt 10873808  T
Q  225 ttgtgcgatctgtg 238  Q
    ||| ||||||||||    
T  10873807 ttgcgcgatctgtg 10873794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 16928730 - 16928643
Alignment:
Q  119 cagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 206  Q
    ||||||||||| |||||||   |||||||||||||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  16928730 cagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccaga 16928643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 24503518 - 24503426
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| |  |||||  | |||||||||||||||||||    
T  24503518 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttggaaagttggcttgtactcgccatggcgagta 24503426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 16980609 - 16980567
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16980609 tacctagtattgattaggaatgaatgtaggatcagagggaacc 16980567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 37318683 - 37318589
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||||||||||||||| | |||    ||| ||||||||  |||||||||| |||  |||||||||||||||||||||||    
T  37318683 catacctagtaatgattaggaatgaatgtagggtaagattagacccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 37318589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 24872105 - 24872199
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| ||| |||| ||||||||||||  |||   |||| ||||||||| |||||||| | |||  | |||||||||||||||||||||    
T  24872105 catacctagtaatgaatagggatgaatgtaggacaagattaaacccagaacaacattagtttggaacttgtcttgtactcgccatggcgagtaag 24872199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 24879990 - 24880084
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| ||| |||| ||||||||||||  |||   |||| ||||||||| |||||||| | |||  | |||||||||||||||||||||    
T  24879990 catacctagtaatgaatagggatgaatgtaggacaagattaaacccagaacaacattagtttggaacttgtcttgtactcgccatggcgagtaag 24880084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 30970677 - 30970771
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||  |||   |||| |||||| || |||||||| | |||  | |||||||||||||||||||||    
T  30970677 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaag 30970771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 16928864 - 16928832
Alignment:
Q  85 catacctagtattgattaggaatgaatgtagga 117  Q
    |||||||||||||||||||||||||||||||||    
T  16928864 catacctagtattgattaggaatgaatgtagga 16928832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 29282482 - 29282511
Alignment:
Q  85 catacctagtattgattaggaatgaatgta 114  Q
    ||||||||||||||||||||||||||||||    
T  29282482 catacctagtattgattaggaatgaatgta 29282511  T

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Target: scaffold0155 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 9514 - 9667
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||     
T  9514 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactc 9613  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || | ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  9614 tcacctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 9667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 2e-55; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 20215626 - 20215779
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||| ||||||||||||||||||| ||     
T  20215626 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactc 20215725  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||| |||||||||||| ||||||| |||||||||||    
T  20215726 tcgcctcgcgagtacaaccaggatgaacttgtttatgtgtttatgcgatctgtg 20215779  T

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Target: chr1; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 43078846 - 43078695
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  43078846 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 43078747  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  43078746 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 43078695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 46157020 - 46157171
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  46157020 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 46157119  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  46157120 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 46157171  T

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Target: chr1; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 41478274 - 41478428
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||  ||     
T  41478274 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactc 41478373  T
Q  185 tcgcttcgggagtacaacc-agaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||| |||||| | ||| ||| ||||||||||||||||||    
T  41478374 tcgcctcgcgagtacaaccaagaatgtaattgcttgagtgtttgtgcgatctgtg 41478428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 44844580 - 44844734
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||||||||||||| |||     
T  44844580 catacctagtattgattaggaatgaatataggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctc 44844679  T
Q  185 tcgcttcgggagtacaa-ccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||| |||| ||||||||| || |||||||||||||||||||    
T  44844680 tcgcctcgcgagtacaacccaggatgaacttgattatgtgtttgtgcgatctgtg 44844734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 18599803 - 18599956
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||  ||||||||||| |||||||||||||||||||||||||||  ||     
T  18599803 catacctagtattgattaggaatgaatgtaggatcagagggaacccataacaactttagtttgggagatgagtggtactcgccatggcgagtaagaactc 18599902  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||||| ||||| |||  |||||||||||||||||    
T  18599903 tcgcctcgcgagtacaaccagaatgtacttgcttgaatgtttgtgcgatctgtg 18599956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 21829122 - 21828969
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||| |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||  ||     
T  21829122 catacctagtatggattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccttggcgagtaagaactc 21829023  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||||| |||||| | ||| ||| ||||||||||||||||||    
T  21829022 tcgcctcgcgagcacaactagaatgtagttgcttgagtgtttgtgcgatctgtg 21828969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 21844635 - 21844482
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||| |||||||||||||||||||||||||  ||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||||  ||     
T  21844635 catacctagtatggattaggaatgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccttggtgagtaagaactc 21844536  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | ||| ||| ||||||||||||||||||    
T  21844535 tcgcctcgcgagcacaaccagaatgtagttgcttgagtgtttgtgcgatctgtg 21844482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 51328376 - 51328497
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||| ||||||||||| ||||||  ||     
T  51328376 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcaagtaagaactc 51328475  T
Q  185 tcgcttcgggagtacaaccaga 206  Q
    |||| ||| |||||||||||||    
T  51328476 tcgcctcgcgagtacaaccaga 51328497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 51335010 - 51335131
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||| ||||||||||| ||||||  ||     
T  51335010 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcaagtaagaactc 51335109  T
Q  185 tcgcttcgggagtacaaccaga 206  Q
    |||| ||| |||||||||||||    
T  51335110 tcgcctcgcgagtacaaccaga 51335131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 208
Target Start/End: Complemental strand, 1011131 - 1011008
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||     
T  1011131 catacctagtattgattaggattgaatgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactc 1011032  T
Q  185 tcgcttcgggagtacaaccagaat 208  Q
    |||| ||| ||| ||| |||||||    
T  1011031 tcgcctcgcgagcacatccagaat 1011008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 47659625 - 47659472
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||| |||| | |||||   ||  ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| ||     
T  47659625 catacctagtattgattagggatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 47659526  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||| | | ||| ||| ||||||||||||||||||    
T  47659525 tcgcctcgcgagtacaaccagaaggtagttgcttgagtgtttgtgcgatctgtg 47659472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 16345512 - 16345625
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  16345512 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 16345611  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  16345612 ttgtgcgatctgtg 16345625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 16352160 - 16352273
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  16352160 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 16352259  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  16352260 ttgtgcgatctgtg 16352273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 41356025 - 41356138
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  41356025 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 41356124  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  41356125 ttgtgcgatctgtg 41356138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 20524913 - 20525005
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||| ||||||| |||||||| |||||| |||||||||||||||||||||    
T  20524913 catacctagtaatgattaggaatgaatgtaggacaagattgaacctataacaacattagtttggaagttgattggtactcgccatggcgagta 20525005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 41348588 - 41348701
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| || |||| ||  |||||||||||||||| | ||| ||| ||||    
T  41348588 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcacgagtacaaccagaatgtagttgcttgagtgt 41348687  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  41348688 ttgtgcgatctgtg 41348701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 21438202 - 21438049
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||  | ||     
T  21438202 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 21438103  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||  ||||| || | |  |||| ||||||||||||||||||    
T  21438102 tcgcctcgcgagcacttccagattggagtgttttgagtgtttgtgcgatctgtg 21438049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 23763619 - 23763466
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||  | ||     
T  23763619 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 23763520  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||  ||||| || | |  |||| ||||||||||||||||||    
T  23763519 tcgcctcgcgagcacttccagattggagtgctttgagtgtttgtgcgatctgtg 23763466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 19063928 - 19063836
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| ||||||||| ||||||||   |||| |||||||||||||||||||||    
T  19063928 catacctagtaatgattaggaatgaatgtaggacaagattgaacccagaacaacattagtttggatattgactggtactcgccatggcgagta 19063836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 19105161 - 19105069
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| | ||||||| |||||||| | |||| |||||||||||||||||||||    
T  19105161 catacctagtaatgattaggaatgaatgtaggacaagattgaacccataacaacattagtttggaaattgactggtactcgccatggcgagta 19105069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 19111818 - 19111726
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| ||||||||| ||||||||   |||| |||||||||||||||||||||    
T  19111818 catacctagtaatgattaggaatgaatgtaggacaagattgaacccagaacaacattagtttggatattgactggtactcgccatggcgagta 19111726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 8305543 - 8305450
Alignment:
Q  86 atacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    |||||||||| |||||||| ||||||||||||  |||   |||| ||||||||| |||||||| | |||  | |||||||||||||||||||||    
T  8305543 atacctagtaatgattagggatgaatgtaggacaagattaaacccagaacaacattagtttggaacttgtctcgtactcgccatggcgagtaag 8305450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 50887450 - 50887544
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||  |||   |||| |||||| || |||||||| | |||  | |||||||||||||||||||||    
T  50887450 catacctagtaatgattagggatgaatgtaggacaagattaaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaag 50887544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 238
Target Start/End: Complemental strand, 44756503 - 44756360
Alignment:
Q  95 attgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcggg 194  Q
    ||||||||||||||| | |||||   ||  ||||| | ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| |    
T  44756503 attgattaggaatgattttaggacaggattgaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcg 44756404  T
Q  195 agtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || |   |||||||| |  |||||| ||| ||||||||||||||    
T  44756403 agcaagtccagaatgtagctgtttgagtggttgtgcgatctgtg 44756360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 27898405 - 27898510
Alignment:
Q  133 aacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 232  Q
    ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| ||| ||||||||    
T  27898405 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtggttgtgcga 27898504  T
Q  233 tctgtg 238  Q
    ||||||    
T  27898505 tctgtg 27898510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 43063022 - 43063127
Alignment:
Q  133 aacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 232  Q
    ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| ||| ||||||||    
T  43063022 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtggttgtgcga 43063121  T
Q  233 tctgtg 238  Q
    ||||||    
T  43063122 tctgtg 43063127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 49334932 - 49334827
Alignment:
Q  133 aacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 232  Q
    ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| ||| ||||||||    
T  49334932 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtggttgtgcga 49334833  T
Q  233 tctgtg 238  Q
    ||||||    
T  49334832 tctgtg 49334827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 108; Significance: 2e-54; HSPs: 3)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 10765 - 10614
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  10765 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 10666  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  10665 gcctcgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatctgtg 10614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 57187 - 57036
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  57187 tacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 57088  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  57087 gcctcgcgagtacaaccaggatgaacttgtttgtgtgtttgtgcgatctgtg 57036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 750 - 903
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||  ||     
T  750 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaacactagtttgggagttgagtggtactcgccgtggcgagtaagaactc 849  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||| ||||| ||| ||| ||||||||||||||||||    
T  850 tcgcctcgcgagcacaaccaggatgaagttgcttgagtgtttgtgcgatctgtg 903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 59158 - 59311
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||  |||||||||||||||||||||||||||||||||||||||||||     
T  59158 catacctagtattgattaggaatgaatgaaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagtgctc 59257  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||  |||||||||||| |||| ||||||| |||||||||||||||||||    
T  59258 tcgcctcacgagtacaaccaggatgagcttgtttatgtgtttgtgcgatctgtg 59311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 109022 - 109175
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||  ||     
T  109022 catacctagtattgattaggaatgaatgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagaactc 109121  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || | ||| |||||||||||||||||  |||||| |||||||||||||||||||    
T  109122 tcacctcgcgagtacaaccagaatgagattgtttatgtgtttgtgcgatctgtg 109175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 139475 - 139322
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||  |||||||||||||||||||||||||||||||||||||||||||     
T  139475 catacctagtattgattaggaatgaatgaaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagtgctc 139376  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||  |||||||||||| |||| ||||||| |||||||||||||||||||    
T  139375 tcgcctcacgagtacaaccaggatgagcttgtttatgtgtttgtgcgatctgtg 139322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 39110 - 38959
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||||||||| || ||    
T  39110 tacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctc 39011  T
Q  187 gcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    || ||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  39010 gcctcgcgagtacaaccaggatgaacttgattatgtgtttgtgcgatctgtg 38959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 27050 - 26897
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| | |||||||||||||||||||||||||||||||||||||||||||||||  ||     
T  27050 catacctagtattgattaggaatgaatgtaggatcagattgaacccaaaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactc 26951  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||| ||||| | ||| ||| ||||||||||||||||||    
T  26950 tcgcctcgcgagcacaacctgaatgtagttgcttgagtgtttgtgcgatctgtg 26897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 43699 - 43636
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgg 148  Q
    ||||||||||| |||||||||||||||||||||  |||   |||| ||||||||| ||||||||    
T  43699 catacctagtaatgattaggaatgaatgtaggacaagattaaacccagaacaacattagtttgg 43636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 125811 - 125964
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||  |||    
T  125811 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacagcactggtttgggagttgagtggtactcgccatggcgagtaagaactt 125910  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | |   ||| ||||||||||||||||||    
T  125911 tcgcctcgcgagcacaaccagaatgtagtgacttgagtgtttgtgcgatctgtg 125964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 105576 - 105729
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| | |||| |||| |||||||||||||||||||||||||||||||||||||  ||     
T  105576 catacctagtattgattaggaatgaatgtaggatcagattgaacccataacagcactggtttgggagttgagtggtactcgccatggcgagtaagaactc 105675  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||| | |   ||| ||||||||||||||||||    
T  105676 tcgcctcgcgagcacaaccagaatgtagtgacttgagtgtttgtgcgatctgtg 105729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 307504 - 307351
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| |||||||| |||||||||||||||||||||||||||  ||     
T  307504 catacctagtattgattaggaatgaatgtaggatcagattgaacccagaacaacactaatttgggagatgagtggtactcgccatggcgagtaagaactc 307405  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| |||||||||||  |  || ||| ||||||||||||||||||    
T  307404 tcgcctcgcgagcacaaccagaatttagatgcttgagtgtttgtgcgatctgtg 307351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 12830 - 12736
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12830 catacctagtattgattaggattgaatgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaag 12736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 3574 - 3697
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| |||||||| |||||||||||||||||  ||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||  ||     
T  3574 catacctagtaatgattagggatgaatgtaggatcagattgaacccagaacaacactagttagggagatgagtggtactcgccatggcgagtaagaactc 3673  T
Q  185 tcgcttcgggagtacaaccagaat 208  Q
    |||| ||| ||| ||| |||||||    
T  3674 tcgcctcgcgagcacatccagaat 3697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 38450 - 38297
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||| |||| | |||||   ||  ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| ||     
T  38450 catacctagtattgattagggatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 38351  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||| | | ||| ||| ||||||||||||||||||    
T  38350 tcgcctcgcgagtacaaccagaaggtagttgcttgagtgtttgtgcgatctgtg 38297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 76362 - 76515
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    |||||||||||||||||||| |||| | |||||   ||  ||||| |||||||||  |||||||||| | |||| ||||||||||||||||||||| ||     
T  76362 catacctagtattgattagggatgattttaggacaggattgaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactc 76461  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| |||||||||||||| | | ||| ||| ||||||||||||||||||    
T  76462 tcgcctcgcgagtacaaccagaaggtagttgcttgagtgtttgtgcgatctgtg 76515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 57342 - 57229
Alignment:
Q  125 gaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 224  Q
    ||||| ||||||||| ||||||||||| | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  57342 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 57243  T
Q  225 ttgtgcgatctgtg 238  Q
    ||||||||||||||    
T  57242 ttgtgcgatctgtg 57229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 179
Target Start/End: Complemental strand, 3118 - 3023
Alignment:
Q  84 tcatacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    |||||||||||| |||||||||||||||||||||  |||  ||||| ||||||||  |||||||||| ||||||||||||||||||||||||||||    
T  3118 tcatacctagtaatgattaggaatgaatgtaggacaagattgaacccagaacaacgttagtttgggaattgagtggtactcgccatggcgagtaag 3023  T

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Target: scaffold0004 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 58116 - 58269
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||  | ||     
T  58116 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 58215  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||  ||||| || | |  |||| ||||||||||||||||||    
T  58216 tcgcctcgcgagcacttccagattggagtgctttgagtgtttgtgcgatctgtg 58269  T

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Target: scaffold0560 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 5496 - 5590
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||| |||  ||||||| ||||||| ||| |||| | |||| | |||||||||||||||||||||    
T  5496 catacctagtaatgattagggatgaatgtaggataagattgaacctaaaacaacattaggttggaacttgacttgtactcgccatggcgagtaag 5590  T

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Target: scaffold0216 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 8575 - 8669
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||| |||  ||||| ||||||||| ||| |||| | |||| | |||||||||||||||||||||    
T  8575 catacctagtaatgattagggatgaatgtaggataagattgaacccagaacaacattaggttggaacttgacttgtactcgccatggcgagtaag 8669  T

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Target: scaffold0010 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 242465 - 242312
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctt 184  Q
    ||||||||||| ||||||||||||||||||||   |||  ||||||||||||||| ||||| || |||||  | |||||||||||||||||||  | ||     
T  242465 catacctagtaatgattaggaatgaatgtagggcaagattgaacctagaacaacattagttgggaagttggcttgtactcgccatggcgagtagatactc 242366  T
Q  185 tcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 238  Q
    |||| ||| ||| ||  ||||| || | |  |||| ||||||||||||||||||    
T  242365 tcgcctcgcgagcacttccagattggagtgctttgagtgtttgtgcgatctgtg 242312  T

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Target: scaffold0259 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 10585 - 10493
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| ||||||||| ||||| ||||||||  | | |||||||||||||||||    
T  10585 catacctagtaatgattaggaatgaatgtaggacaagattgaacccagaacaacattagttggggagttggcttgaactcgccatggcgagta 10493  T

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Target: scaffold0233 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 14238 - 14330
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| ||||||||| ||||| ||||||||  | | |||||||||||||||||    
T  14238 catacctagtaatgattaggaatgaatgtaggacaagattgaacccagaacaacattagttggggagttggcttgaactcgccatggcgagta 14330  T

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Target: scaffold0138 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 29905 - 29997
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| || || || |||||  | |||||||||||||||||||    
T  29905 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattatttgggaagttggcttgtactcgccatggcgagta 29997  T

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Target: scaffold0138; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 41901 - 41951
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaac 135  Q
    ||||||||||| |||||||||||||||||||||  |||  |||||||||||    
T  41901 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaac 41951  T

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Target: scaffold0013 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 9748 - 9656
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| ||||||||| ||||| ||||||||    |||||||||||||||||||    
T  9748 catacctagtaatgattaggaatgaatgtaggacaagattgaacccagaacaacattagttggggagttggcctgtactcgccatggcgagta 9656  T

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Target: scaffold0431 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 12852 - 12758
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||  |||  | ||| ||||||||  |||||||||| |||  |||||||||||||||||||||||    
T  12852 catacctagtaatgattagggatgaatgtaggacaagattggacccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 12758  T

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Target: scaffold0370 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 17430 - 17512
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgcc 167  Q
    ||||||||||| |||||||||||||||||||||  |||  |||||||||||| || |||||||| | |||| |||||||||||    
T  17430 catacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaccattagtttggaaattgactggtactcgcc 17512  T

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Target: scaffold0256 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 24673 - 24765
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| ||||| |||||||||||||||  |||  |||||||||| |||| ||||| ||||||||  | ||||||||||||| |||||    
T  24673 catacctagtaatgattgggaatgaatgtaggacaagattgaacctagaataacattagttggggagttggcttgtactcgccatggtgagta 24765  T

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Target: scaffold0256; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 19830 - 19884
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaaca 139  Q
    ||||||||||| ||||| |||||||||||||||  |||  |||||||||||||||    
T  19830 catacctagtaatgattgggaatgaatgtaggacaagattgaacctagaacaaca 19884  T

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Target: scaffold0780 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 522 - 428
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||| ||||||||||||| |||   |||| |||||| || |||||||| | |||  | |||||||||||||||||||||    
T  522 catacctagtaatgattaggtatgaatgtaggattagattaaacccagaacatcattagtttggaacttgtcttgtactcgccatggcgagtaag 428  T

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Target: scaffold0156 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 3180 - 3086
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagtaag 179  Q
    ||||||||||| |||||||||||||||||||||  |||    ||| ||||||||  |||||||||| |||  ||||||| |||||||||||||||    
T  3180 catacctagtaatgattaggaatgaatgtaggacaagattagacccagaacaaccttagtttgggaattgtttggtacttgccatggcgagtaag 3086  T

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Target: scaffold0055 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 61212 - 61180
Alignment:
Q  87 tacctagtattgattaggaatgaatgtaggatc 119  Q
    |||||||||||||||||||||||||||||||||    
T  61212 tacctagtattgattaggaatgaatgtaggatc 61180  T

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Target: scaffold0553 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 9149 - 9044
Alignment:
Q  133 aacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 232  Q
    ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| ||| ||||||||    
T  9149 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtggttgtgcga 9050  T
Q  233 tctgtg 238  Q
    ||||||    
T  9049 tctgtg 9044  T

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Target: scaffold0126 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 3824 - 3929
Alignment:
Q  133 aacaacactagtttgggagttgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 232  Q
    ||||||| ||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| ||| ||||||||    
T  3824 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtggttgtgcga 3923  T
Q  233 tctgtg 238  Q
    ||||||    
T  3924 tctgtg 3929  T

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Target: scaffold0051 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 37115 - 37023
Alignment:
Q  85 catacctagtattgattaggaatgaatgtaggatcagagggaacctagaacaacactagtttgggagttgagtggtactcgccatggcgagta 177  Q
    ||||||||||| |||||||| |||||||||||   |||  ||||| |||||| || ||| |||| | |||| | ||||||||| |||||||||    
T  37115 catacctagtaatgattagggatgaatgtagggcaagattgaacccagaacagcattagcttggaacttgacttgtactcgccttggcgagta 37023  T

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