View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1318_low_146 (Length: 251)

Name: NF1318_low_146
Description: NF1318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1318_low_146
NF1318_low_146
[»] chr4 (17 HSPs)
chr4 (29-241)||(36464914-36465126)
chr4 (29-251)||(51356997-51357219)
chr4 (46-251)||(8819392-8819597)
chr4 (78-249)||(42555185-42555360)
chr4 (61-251)||(23626702-23626892)
chr4 (64-244)||(17120370-17120561)
chr4 (155-251)||(38951575-38951671)
chr4 (105-251)||(29116925-29117071)
chr4 (155-241)||(40714942-40715028)
chr4 (47-251)||(41039166-41039384)
chr4 (29-251)||(19841557-19841791)
chr4 (187-251)||(43624399-43624463)
chr4 (61-139)||(40572096-40572175)
chr4 (155-251)||(22278267-22278363)
chr4 (45-139)||(38951452-38951547)
chr4 (61-145)||(40715050-40715133)
chr4 (179-241)||(25366258-25366321)
[»] chr8 (13 HSPs)
chr8 (29-244)||(31005831-31006047)
chr8 (29-251)||(36582969-36583202)
chr8 (149-251)||(8227325-8227427)
chr8 (166-244)||(9763015-9763093)
chr8 (29-141)||(7987426-7987539)
chr8 (155-251)||(13355756-13355852)
chr8 (29-251)||(7968512-7968747)
chr8 (191-241)||(11481406-11481456)
chr8 (186-251)||(6870710-6870775)
chr8 (62-139)||(13355650-13355728)
chr8 (105-141)||(8227446-8227482)
chr8 (46-94)||(9765250-9765298)
chr8 (105-141)||(11481325-11481361)
[»] chr2 (11 HSPs)
chr2 (29-251)||(5704418-5704652)
chr2 (46-251)||(5938567-5938777)
chr2 (29-251)||(5110022-5110257)
chr2 (101-251)||(45151319-45151478)
chr2 (157-251)||(13807500-13807594)
chr2 (46-251)||(31576022-31576243)
chr2 (64-251)||(45458471-45458662)
chr2 (61-139)||(42625217-42625296)
chr2 (29-141)||(13626497-13626610)
chr2 (29-85)||(13807387-13807443)
chr2 (101-141)||(13807442-13807480)
[»] chr1 (16 HSPs)
chr1 (46-251)||(19884486-19884702)
chr1 (61-225)||(15378742-15378910)
chr1 (46-244)||(31292840-31293050)
chr1 (46-251)||(29678395-29678614)
chr1 (29-251)||(38264409-38264634)
chr1 (47-244)||(47140621-47140828)
chr1 (46-251)||(31585309-31585526)
chr1 (46-251)||(17562862-17563079)
chr1 (149-251)||(36728829-36728931)
chr1 (166-251)||(25987352-25987437)
chr1 (47-251)||(48379166-48379385)
chr1 (29-244)||(2191879-2192099)
chr1 (182-251)||(11894270-11894339)
chr1 (61-141)||(36728951-36729032)
chr1 (61-97)||(25294169-25294205)
chr1 (106-194)||(52252592-52252679)
[»] chr7 (23 HSPs)
chr7 (46-251)||(2944156-2944365)
chr7 (148-251)||(40910573-40910676)
chr7 (64-251)||(36298628-36298824)
chr7 (115-251)||(47924883-47925026)
chr7 (62-249)||(22519281-22519471)
chr7 (29-251)||(30541567-30541794)
chr7 (166-251)||(15954715-15954800)
chr7 (29-251)||(23809756-23809991)
chr7 (63-251)||(25501992-25502190)
chr7 (171-244)||(31457225-31457298)
chr7 (47-251)||(11039267-11039482)
chr7 (29-244)||(33189208-33189433)
chr7 (155-251)||(5972915-5973010)
chr7 (155-251)||(38440522-38440618)
chr7 (166-244)||(7767028-7767106)
chr7 (108-251)||(1053199-1053331)
chr7 (61-139)||(27336789-27336868)
chr7 (51-141)||(38440647-38440738)
chr7 (166-246)||(36470022-36470100)
chr7 (62-137)||(7766908-7766984)
chr7 (101-138)||(5972850-5972887)
chr7 (208-251)||(28636373-28636416)
chr7 (188-251)||(31758949-31759012)
[»] chr6 (12 HSPs)
chr6 (29-251)||(8576565-8576799)
chr6 (47-241)||(7622197-7622403)
chr6 (46-230)||(28581980-28582169)
chr6 (61-141)||(35167912-35167993)
chr6 (155-244)||(10409051-10409139)
chr6 (182-251)||(10788456-10788525)
chr6 (155-251)||(35167367-35167463)
chr6 (65-141)||(34434999-34435076)
chr6 (152-251)||(642141-642234)
chr6 (79-141)||(5999398-5999461)
chr6 (196-251)||(7245563-7245618)
chr6 (166-220)||(34433714-34433768)
[»] chr5 (13 HSPs)
chr5 (64-243)||(2209389-2209575)
chr5 (29-251)||(23429049-23429283)
chr5 (63-250)||(33742797-33742999)
chr5 (29-251)||(35188674-35188909)
chr5 (149-251)||(39207198-39207300)
chr5 (155-244)||(3926147-3926236)
chr5 (63-242)||(42836831-42837020)
chr5 (148-244)||(26621320-26621416)
chr5 (61-139)||(40056830-40056909)
chr5 (63-139)||(39800606-39800683)
chr5 (61-141)||(42879088-42879169)
chr5 (101-141)||(3926081-3926121)
chr5 (206-251)||(42878975-42879020)
[»] chr3 (12 HSPs)
chr3 (45-251)||(27926702-27926920)
chr3 (29-251)||(13825723-13825957)
chr3 (101-251)||(26187815-26187971)
chr3 (149-251)||(5295155-5295257)
chr3 (46-251)||(25874784-25875003)
chr3 (101-251)||(21287985-21288146)
chr3 (70-195)||(4127857-4127981)
chr3 (165-251)||(48251746-48251831)
chr3 (61-139)||(12148879-12148958)
chr3 (197-251)||(3778988-3779042)
chr3 (62-145)||(48251843-48251927)
chr3 (45-141)||(36584227-36584324)
[»] scaffold0041 (1 HSPs)
scaffold0041 (148-251)||(62418-62521)
[»] scaffold0155 (2 HSPs)
scaffold0155 (155-251)||(6969-7065)
scaffold0155 (108-141)||(7092-7125)
[»] scaffold0057 (1 HSPs)
scaffold0057 (29-141)||(66412-66525)
[»] scaffold0115 (1 HSPs)
scaffold0115 (61-204)||(21911-22056)
[»] scaffold0691 (1 HSPs)
scaffold0691 (61-139)||(7764-7843)


Alignment Details
Target: chr4 (Bit Score: 173; Significance: 4e-93; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 36465126 - 36464914
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgagtacccgcgggtttatacagatatccatggat 128  Q
    |||||||||||| ||||||||||||||| ||| || |||||||||||||||||||||||||||||| | |||| ||||||||||||||||| ||||| ||    
T  36465126 aatatgaaatcaatgttctatccatatccgcatggttatccatttagcgggtaatccatggattttaaatacctgcgggtttatacagatacccatgaat 36465027  T
Q  129 aacatttataaaacaaatcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattca 228  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36465026 aacatttataaaacaaatcgttaatattttttagctgaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattca 36464927  T
Q  229 tacattacaataa 241  Q
    |||||||||||||    
T  36464926 tacattacaataa 36464914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 51356997 - 51357219
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgagtacccgcgggtttatacagatatccatggat 128  Q
    ||||||||||  |||  |||||||||||  |||||||||| ||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||    
T  51356997 aatatgaaatttgtgccctatccatatccacacggatatcaatttagcgggtaatccacgaattttgagtacccgcaggtttatacagatatccatggat 51357096  T
Q  129 aacatttataaaacaaatcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattca 228  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  51357097 aacatttataaaacaaattgttaatattttttagctgaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacataatatcca 51357196  T
Q  229 tacattacaataacaataaagat 251  Q
    |||||||||||||||| ||||||    
T  51357197 tacattacaataacaacaaagat 51357219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 46 - 251
Target Start/End: Complemental strand, 8819597 - 8819392
Alignment:
Q  46 ctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaa 144  Q
    ||||||||||| || |||||||||||||||||||||||||| | ||||| || || ||| || ||||||||||||||| | |||||||||||||||| ||    
T  8819597 ctatccatatccgcgcggatatccatttagcgggtaatccacgaattttaaggtatccgtggatttatacagatatcc-tagataacatttataaaaaaa 8819499  T
Q  145 a-tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataaca 243  Q
    | | |||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||| |||||||    
T  8819498 aattgttaat-ttttttaggtgaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacataatatctatacattataataaca 8819400  T
Q  244 ataaagat 251  Q
    | ||||||    
T  8819399 acaaagat 8819392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 78 - 249
Target Start/End: Original strand, 42555185 - 42555360
Alignment:
Q  78 ggtaatccatggattttgag-tacccgcggg-tttatacagatatccatggataacatttataaaac--aaatcgttaatattttttagcggaaatttaa 173  Q
    ||||||| || ||||||||| || ||||||| ||||||||||||| ||||||||||||| ||||||   |||| |||||| ||||||||| |||||||||    
T  42555185 ggtaatctatagattttgagatatccgcggggtttatacagatattcatggataacattaataaaaataaaattgttaattttttttagctgaaatttaa 42555284  T
Q  174 aaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaag 249  Q
    |||| ||||||||| |||||||||||||||||||||||| ||| ||| |||| |||||||||||||||||| ||||    
T  42555285 aaacaaaagttcataacatgcattttcttttctttttagaaaagcataatatacatacattacaataacaacaaag 42555360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 61 - 251
Target Start/End: Original strand, 23626702 - 23626892
Alignment:
Q  61 cggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaaatcgttaatattttt 159  Q
    ||||||||| |||||| |||||||||  ||||||||| || ||||| ||||||||| ||||||||||||||||||||| | | ||||     || |||||    
T  23626702 cggatatccgtttagcaggtaatccacagattttgaggtatccgcgagtttatacatatatccatggataacatttattaca-aaataaaatattttttt 23626800  T
Q  160 tagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
     | | |||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||| ||||||    
T  23626801 aatctgaaaattaaaaacaaaagttcatcacatgcattttcttttctgtttagaaaaacataatatccatatattacaataacaacaaagat 23626892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 244
Target Start/End: Complemental strand, 17120561 - 17120370
Alignment:
Q  64 atatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaaa----------tcgttaa 152  Q
    |||||| ||||||||||||||||   |||||||| || ||||| ||||||| ||||||| ||| ||||||||||||||| |||          | || |     
T  17120561 atatccgtttagcgggtaatccacaaattttgagctatccgcgagtttatatagatatctatgaataacatttataaaataaaaataaaaaatttgtaat 17120462  T
Q  153 tattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaa 244  Q
    | ||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  17120461 tttttttaaactgaaatttaaaaacaaaagttcatcacatgcattttcttttctttttaacaaaacataatatccatacattacaataacaa 17120370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 38951575 - 38951671
Alignment:
Q  155 ttttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||||||||  ||||||| |||| || |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  38951575 ttttttagctaaaatttagaaacaaaggttcttcacatgcattttcttttctttttaacaaaacataatattcatacattacaataacaacaaagat 38951671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 251
Target Start/End: Original strand, 29116925 - 29117071
Alignment:
Q  105 gggtttatacagatatccatggataacatttataaaacaaatcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttctttt 204  Q
    |||||||| || ||||  |||||||||||||| |||| || | ||| || | ||||| |  ||||||| |||| || |||||||||||||||||| ||||    
T  29116925 gggtttatgcaaatatttatggataacatttacaaaaaaatttgtttatttgttttaactaaaatttagaaacaaaggttcatcacatgcattttatttt 29117024  T
Q  205 ctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    ||| |||||||||||| |||||||||||||||||||| || ||||||    
T  29117025 cttcttagcaaaacataatattcatacattacaataataacaaagat 29117071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 40715028 - 40714942
Alignment:
Q  155 ttttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataa 241  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||| || ||||  ||||||||||||||    
T  40715028 ttttttagctgaaatttaaaaacaaaagttcatcacatgcattttcttttgtttttagcaaaatataatatcaatacattacaataa 40714942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 251
Target Start/End: Original strand, 41039166 - 41039384
Alignment:
Q  47 tatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaaa 145  Q
    |||||||||| |  |||||||||||||||||||||||||  ||||||| || || |||| | ||||||||||||||||||||||||||||||||||  ||    
T  41039166 tatccatatccgtgcggatatccatttagcgggtaatccgcggatttttaggtatccgcagatttatacagatatccatggataacatttataaaaataa 41039265  T
Q  146 -----------tcgttaatatttttt--agcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcataca 232  Q
               |  || || ||||||  |||  ||||||| |||| || |||| ||| ||| |||||||||||||||||||||||||| ||| |||||||    
T  41039266 aataaaatttttgtttgattttttttttagctaaaatttagaaacaaaggttcttcatatgtattttcttttctttttagcaaaacatcatagtcataca 41039365  T
Q  233 ttacaataacaataaagat 251  Q
    |||||||||||| ||||||    
T  41039366 ttacaataacaacaaagat 41039384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 19841557 - 19841791
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| ||   ||||| |||||||  ||||||||| ||||||||||||||    ||||||||| || |||||| ||||||||||||| ||||||    
T  19841557 aatatgaaatccgtaccctatcgatatctgtgcggatatccgtttagcgggtaatctgctgattttgaggtatccgcggatttatacagatattcatgga 19841656  T
Q  128 taacattt-----------ataaaacaaatcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaa 216  Q
    ||||||||           |||||| || |  ||||| ||||| | |  |||||||||||| || |||| |||||||| ||||||||||||||||  |||    
T  19841657 taacatttataaaaataaaataaaaaaattatttaatttttttgaactaaaatttaaaaacaaaggttcttcacatgcgttttcttttctttttaagaaa 19841756  T
Q  217 acatgatattcatacattacaataacaataaagat 251  Q
    |||| |||| | |||||||||||||||| ||||||    
T  19841757 acataatatccgtacattacaataacaacaaagat 19841791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 43624399 - 43624463
Alignment:
Q  187 tcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||||||||||||||||||||||||||||||||| || | |||| ||||||||||||| ||||||    
T  43624399 tcacatgcattttcttttctttttagcaaaacataatttccatatattacaataacaacaaagat 43624463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 40572175 - 40572096
Alignment:
Q  61 cggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttataa 139  Q
    |||||||||||||||||| ||||||||||||||||| ||| |  ||| ||||||| |||||| |||||||||||| ||||    
T  40572175 cggatatccatttagcggataatccatggattttgaggtatctacggatttatacggatatctatggataacattcataa 40572096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 22278267 - 22278363
Alignment:
Q  155 ttttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||||||||  ||||||| |||| || |||| | |||||||||||||||||||||| ||||||||| |||| ||| ||| ||  |||||| ||||||    
T  22278267 ttttttagctaaaatttagaaacaaatgttcttaacatgcattttcttttctttttggcaaaacataatatccatgcatcacggtaacaacaaagat 22278363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 38951452 - 38951547
Alignment:
Q  45 tctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataa 139  Q
    |||||||||||| || ||||||||| |||| ||| |||||   | |||||||| ||  |||||||||||| |||||||| ||||||||||||||||    
T  38951452 tctatccatatccgcgcggatatccgtttaacggataatctgcgaattttgaggtaatcgcgggtttatatagatatccgtggataacatttataa 38951547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 40715133 - 40715050
Alignment:
Q  61 cggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaaa 145  Q
    ||||||||| |||||||| ||||| ||||||||| || || |||  |||||||||| ||||||||||||||||| ||||||| |||    
T  40715133 cggatatccgtttagcgg-taatc-atggattttaaggtatccgtaggtttatacatatatccatggataacatctataaaataaa 40715050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 25366321 - 25366258
Alignment:
Q  179 aaagttcatcacatgcattttcttttctttttagcaaaacatga---tattcatacattacaataa 241  Q
    |||||||||||||| |||||||||  ||||||| |||||||| |   |||||||||||||||||||    
T  25366321 aaagttcatcacattcattttctt--ctttttaccaaaacataaaaatattcatacattacaataa 25366258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 5e-46; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 29 - 244
Target Start/End: Original strand, 31005831 - 31006047
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| |||  ||||||||||  || ||||||||| |||||||| ||||||| |||||||||| || | |||| |||||| |||| || |||||    
T  31005831 aatatgaaatccgtgccctatccatattcgcgcggatatccgtttagcggataatccacggattttgaggtatctgcggatttataaagatctctatgga 31005930  T
Q  128 taacatttat-aaaacaaatcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatatt 226  Q
    |||||||||| |||| |||| | |||| ||||||||| ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  31005931 taacatttattaaaaaaaattgctaat-ttttttagctgaaatttaaaaacaaaagttcattacatgcattttctattctttttagcaaaacataatatt 31006029  T
Q  227 catacattacaataacaa 244  Q
    || ||||||| |||||||    
T  31006030 cacacattacgataacaa 31006047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 251
Target Start/End: Complemental strand, 36583202 - 36582969
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| ||   |||| |||||| || ||||||||| |||| |||||||||||  ||||||||| || | ||| ||||||| |||||||||||||    
T  36583202 aatatgaaatccgtaccctattcatatccgcgcggatatccgtttaacgggtaatccacagattttgaggtatcagcgagtttatatagatatccatgga 36583103  T
Q  128 taacatttat------aaaacaaa----tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaa 217  Q
    ||||||||||      |||| |||    | ||| |  ||| |||||  ||||||| |||  || |||| |||||||||||||||||||||||||||||||    
T  36583102 taacatttatgaaaataaaataaaaaatttgttcaattttgttagctaaaatttagaaataaaggttcttcacatgcattttcttttctttttagcaaaa 36583003  T
Q  218 catgatattcatacattacaataacaataaagat 251  Q
    ||| ||||||||||||||||||||||| ||||||    
T  36583002 cataatattcatacattacaataacaacaaagat 36582969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 8227427 - 8227325
Alignment:
Q  149 ttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaa 248  Q
    ||||| |||||||||  ||||||| |||| ||||||| ||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||| |||    
T  8227427 ttaattttttttagctaaaatttagaaacaaaagttcttcacacgcattttcttttctacttagcaaaacataatattcatacattacaataacaacaaa 8227328  T
Q  249 gat 251  Q
    |||    
T  8227327 gat 8227325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 9763093 - 9763015
Alignment:
Q  166 aaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaa 244  Q
    ||||||| |||| || |||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  9763093 aaatttagaaacaaaggttcttcacatgcattttcttttatttttagcaaaacataatattcatacattacaataacaa 9763015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 141
Target Start/End: Complemental strand, 7987539 - 7987426
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| ||   ||||||||||| |  ||||||||| ||||||||||||||   |||||||||| || | |||||||||||||||||||||||||    
T  7987539 aatatgaaatccgtaccctatccatatccgtgcggatatccgtttagcgggtaatctgcggattttgaggtatctgcgggtttatacagatatccatgga 7987440  T
Q  128 taacatttataaaa 141  Q
    ||||||||||||||    
T  7987439 taacatttataaaa 7987426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 13355756 - 13355852
Alignment:
Q  155 ttttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||||||||  ||||||| |||| || |||||||| |||||||||||||||||||||||||||||| |||| ||||||||| || ||||| ||||||    
T  13355756 ttttttagctaaaatttagaaacaaaggttcatcatatgcattttcttttctttttagcaaaacataatatccatacattagaacaacaacaaagat 13355852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 251
Target Start/End: Complemental strand, 7968747 - 7968512
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| ||   ||||||||||| |  ||||||||| |||||||||||||||  ||||||||| ||| || |||||||||||| |||||||| ||    
T  7968747 aatatgaaatccgtaccctatccatatccgtgcggatatccgtttagcgggtaatccgcggattttgaggtatccacgggtttatacatatatccataga 7968648  T
Q  128 taacatttataaaacaaa-----------tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttc--tttttagca 214  Q
    | ||||||||||||  ||           |  ||||| |||||||||  || |||| |||| || |||| |||||| ||||| ||||||  |||||||||    
T  7968647 tgacatttataaaaataaaataaaaaatttgcttaat-ttttttagctaaattttagaaacaaaggttcttcacatccatttacttttctttttttagca 7968549  T
Q  215 aaacatgatattcatacattacaataacaataaagat 251  Q
    |||||| |||| |||||||||||||||||| ||||||    
T  7968548 aaacataatatccatacattacaataacaacaaagat 7968512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 11481406 - 11481456
Alignment:
Q  191 atgcattttcttttctttttagcaaaacatgatattcatacattacaataa 241  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  11481406 atgcattttcttttctttttagcaaaacataatattcacacattacaataa 11481456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 6870775 - 6870710
Alignment:
Q  186 atcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    ||||||||||||||| |||||| ||||| |||||| |||||||||||||||||| |||| ||||||    
T  6870775 atcacatgcattttcgtttcttattagcgaaacataatattcatacattacaattacaacaaagat 6870710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 13355650 - 13355728
Alignment:
Q  62 ggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttataa 139  Q
    |||||||| |||||| |||||||| |||||||||| ||| ||| ||||||||||||||||| |  ||||||||||||||    
T  13355650 ggatatccgtttagcaggtaatccgtggattttgaggtatccgtgggtttatacagatatcgaaagataacatttataa 13355728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 8227482 - 8227446
Alignment:
Q  105 gggtttatacagatatccatggataacatttataaaa 141  Q
    ||||||||||| |||||||||||||||||||||||||    
T  8227482 gggtttatacatatatccatggataacatttataaaa 8227446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 9765298 - 9765250
Alignment:
Q  46 ctatccatatctgcacggatatccatttagcgggtaatccatggatttt 94  Q
    ||||||||||| ||  |||||||||||||||||||||||| ||||||||    
T  9765298 ctatccatatccgcgtggatatccatttagcgggtaatccgtggatttt 9765250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 11481325 - 11481361
Alignment:
Q  105 gggtttatacagatatccatggataacatttataaaa 141  Q
    |||||||||||||||| ||||||||||||||||||||    
T  11481325 gggtttatacagatattcatggataacatttataaaa 11481361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 5704418 - 5704652
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| ||  |||||| ||||| || ||||||||| ||||||||||||||||  ||||||||| || |||||||||||||||||||||||||||    
T  5704418 aatatgaaatctgtactctatctatatccgcgcggatatccgtttagcgggtaatccaatgattttgaggtatccgcgggtttatacagatatccatgga 5704517  T
Q  128 taacatttataaaacaaa-----------tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaa 216  Q
    ||||||||||||||  ||           |  ||||| |||||||||  ||||||| |||| || |||| |||||||||||||||||| |||||||||||    
T  5704518 taacatttataaaaataaaataaaaaatttgtttaattttttttagctaaaatttagaaacaaaggttcttcacatgcattttcttttatttttagcaaa 5704617  T
Q  217 acatgatattcatacattacaataacaataaagat 251  Q
    |||| ||||||||||||||||||||||| ||||||    
T  5704618 acataatattcatacattacaataacaacaaagat 5704652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 46 - 251
Target Start/End: Original strand, 5938567 - 5938777
Alignment:
Q  46 ctatccatatctgcacggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttata--aaac 142  Q
    ||||||||||| ||  |||||||| ||||||||||||||||  |||||||| ||| | ||||||||||||| ||||||||||||||||||||||  |||     
T  5938567 ctatccatatccgcgtggatatccgtttagcgggtaatccacagattttgaagtatctgcgggtttatacaaatatccatggataacatttatataaaaa 5938666  T
Q  143 aaatcgttaatatttttt--agcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaata 240  Q
    |||| ||| |||||||||  ||   ||||||| |||| |  |||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  5938667 aaattgttgatattttttttagttaaaatttagaaacaatggttcttcacatgcattttcttttctttttagcaaaacatagtattcatacattacaata 5938766  T
Q  241 acaataaagat 251  Q
    |||| ||||||    
T  5938767 acaacaaagat 5938777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 5110022 - 5110257
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| || ||||||||||||     ||||||||| |||||||||||||||| |||||||||| || |||||| ||| ||||||||||||||||    
T  5110022 aatatgaaatccgtattctatccatattcatgcggatatccgtttagcgggtaatccacggattttgaggtatccgcggatttttacagatatccatgga 5110121  T
Q  128 taacatttataaaacaaa-----------tcgttaatatttttt-agcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaa 215  Q
    ||||||||||||||  ||           |  ||||| |||||| |||  ||||||| |||| || |||| |||||||||||||||||||||||||||||    
T  5110122 taacatttataaaaataaaataaaaaatttgtttaatttttttttagctaaaatttagaaacaaaggttcttcacatgcattttcttttctttttagcaa 5110221  T
Q  216 aacatgatattcatacattacaataacaataaagat 251  Q
    ||||| ||||||||||||||||||||||| ||||||    
T  5110222 aacataatattcatacattacaataacaacaaagat 5110257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 101 - 251
Target Start/End: Complemental strand, 45151478 - 45151319
Alignment:
Q  101 ccgcgggtttatacagatatccatggataacatttataaaac--------aaatcgtt-aatattttttagcggaaatttaaaaaccaaagttcatcaca 191  Q
    ||||||||||||||||||||| |||||||||||||||||||         |||| ||| ||| |||||||||  ||||||| | || || |||| |||||    
T  45151478 ccgcgggtttatacagatatctatggataacatttataaaaattaaaaaaaaattgtttaattttttttagctaaaatttagagacaaaggttcttcaca 45151379  T
Q  192 tgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  45151378 tgcatttttttttctttttagcaaaacataatattcatacattacaataacaacaaagat 45151319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 13807500 - 13807594
Alignment:
Q  157 ttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||||||  ||||||| |||| || |||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||    
T  13807500 ttttagctaaaatttagaaacaaaggttcttcacatgcattttcttttctgtttagcaaaacataatattcatacattacaataacaacaaagat 13807594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 251
Target Start/End: Complemental strand, 31576243 - 31576022
Alignment:
Q  46 ctatccatatctgcacggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttata------ 138  Q
    ||||||||||| |   ||||||||||||||||||||||||  | ||||| | ||| ||| |||||| |||||||||||||||||||||||||||          
T  31576243 ctatccatatccgtgtggatatccatttagcgggtaatccgcgaatttttaggtatccgtgggtttgtacagatatccatggataacatttataaaaata 31576144  T
Q  139 ----aaacaaatcgttaa--tattt---tttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcat 229  Q
        ||| || | ||| |  |||||   ||||||  ||||||| |||| || |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  31576143 aaataaaaaatttgtttatttatttttatttagctaaaatttagaaacaaaggttcttcacatgcattttcttttctttttagcaaaacataatattcat 31576044  T
Q  230 acattacaataacaataaagat 251  Q
    |||||||||||| || ||||||    
T  31576043 acattacaataataacaaagat 31576022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 251
Target Start/End: Complemental strand, 45458662 - 45458471
Alignment:
Q  64 atatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttat---aaaacaaatcgttaatattttt 159  Q
    |||||||||||||||||||||||  |||||||| ||| || |   ||||||||||||||||||||||||||||||   |||| |||| ||| || || ||    
T  45458662 atatccatttagcgggtaatccacagattttgaagtatccacaaatttatacagatatccatggataacatttataaaaaaaaaaattgttgat-ttctt 45458564  T
Q  160 tagcggaaatttaaaaaccaaagttcatcacatg-cattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    || |  |||||||||||| ||||||||||||||| | |||| |||| |||| ||  |||||| |||| |||||||||| ||||||| ||||||    
T  45458563 tatctaaaatttaaaaacaaaagttcatcacatgtctttttttttttttttaagagaaacataatatccatacattaccataacaacaaagat 45458471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 42625296 - 42625217
Alignment:
Q  61 cggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttataa 139  Q
    ||||||| |||||||||| ||||||||||||||||| ||| || ||| ||||||| ||||||||||||||||||| ||||    
T  42625296 cggatattcatttagcggataatccatggattttgaggtatccacggatttatacggatatccatggataacattcataa 42625217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 141
Target Start/End: Complemental strand, 13626610 - 13626497
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| ||   ||||||||||| |  |||||||||  |||| |||||||||    |||||||| || |||||||||||||||||||| ||||||    
T  13626610 aatatgaaatccgtaccctatccatatccgggcggatatcctcttagagggtaatccgcatattttgagatatccgcgggtttatacagatattcatgga 13626511  T
Q  128 taacatttataaaa 141  Q
    ||||||||||||||    
T  13626510 taacatttataaaa 13626497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 13807387 - 13807443
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatcc 85  Q
    ||||||||||| || | ||||||||||| |  |||||||||||||||||||||||||    
T  13807387 aatatgaaatccgtatcctatccatatccgtgcggatatccatttagcgggtaatcc 13807443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 13807442 - 13807480
Alignment:
Q  101 ccgcgggtttatacagatatccatggataacatttataaaa 141  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  13807442 ccgcgggtttatacagat--ccatggataacatttataaaa 13807480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 1e-43; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 46 - 251
Target Start/End: Complemental strand, 19884702 - 19884486
Alignment:
Q  46 ctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaa 144  Q
    ||||| ||||| ||||| |||| |||||| |||| |||||| | |||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||    
T  19884702 ctatctatatccgcacgaatattcatttaacggggaatccacgaattttgaggtatccgcgggtttatatagatatccatggataacatttataaaaaaa 19884603  T
Q  145 atc----------gttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacatt 234  Q
    ||           |||||| ||||| ||| ||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||    
T  19884602 attaaaaaaaattgttaatttttttgagctgaaatttaaaacccaaagttcatcacgtgcgttttcttttctttttagcaaaacataatattcatacatt 19884503  T
Q  235 acaataacaataaagat 251  Q
    ||||||| || ||||||    
T  19884502 acaataataacaaagat 19884486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 61 - 225
Target Start/End: Original strand, 15378742 - 15378910
Alignment:
Q  61 cggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaa----acaaatcgttaatat 155  Q
    ||||||||||||||||||||||||||||||||||||| || |  ||| |||||||| ||||||||||||||||||||||||    | |||| |||||| |    
T  15378742 cggatatccatttagcgggtaatccatggattttgaggtatcaacggatttatacaaatatccatggataacatttataaataaaaaaaattgttaat-t 15378840  T
Q  156 tttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatat 225  Q
    |||||| | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  15378841 tttttacctgaaaattaaaaacgaaagttcatcacatgcattttcttttctttttagcaaaacataatat 15378910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 46 - 244
Target Start/End: Complemental strand, 31293050 - 31292840
Alignment:
Q  46 ctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaa 144  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||||| || || |||||| ||||||||||||||||||||||||||||||||||  |    
T  31293050 ctatccatatctgtgcggatatccatttagcggataatccatggatttttaggtatccgcggatttatacagatatccatggataacatttataaaaata 31292951  T
Q  145 a-----------tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacat 233  Q
    |           |  ||||| ||||||| |  |||||||||||| || |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  31292950 aaataaaaaatttgtttaattttttttaactaaaatttaaaaacaaaggttcttcacatgcattttcttttctttttagcaaaacataatattcatacat 31292851  T
Q  234 tacaataacaa 244  Q
    || ||||||||    
T  31292850 tataataacaa 31292840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 46 - 251
Target Start/End: Complemental strand, 29678614 - 29678395
Alignment:
Q  46 ctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaa 144  Q
    ||||||||||| || ||||||||| ||||  |||||||||  |||||||||| || || ||||||||||||||||||||||||||||||||||||||  |    
T  29678614 ctatccatatccgcgcggatatccgtttaatgggtaatccgcggattttgaggtatccacgggtttatacagatatccatggataacatttataaaaata 29678515  T
Q  145 a------------tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttag-caaaacatgatattcatac 231  Q
    |            |  ||||| |||||||||  ||||||| |||| ||||||| ||||||||||||||||||||||||||  |||||||  |||||||||    
T  29678514 aaataaaaaaatttgtttaattttttttagctaaaatttagaaacaaaagttcttcacatgcattttcttttctttttagtaaaaacatattattcatac 29678415  T
Q  232 attacaataacaataaagat 251  Q
    ||||||||||||| ||||||    
T  29678414 attacaataacaacaaagat 29678395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 251
Target Start/End: Complemental strand, 38264634 - 38264409
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| |||  ||||||||||| || | ||||||| |||||| ||||||||| | ||||||| ||| |||||||||||||||||||||||||||    
T  38264634 aatatgaaatccgtgccctatccatatccgcgcagatatccgtttagccggtaatccacgaattttgaagtatccgcgggtttatacagatatccatgga 38264535  T
Q  128 taacatttataaaacaaatcgttaata-ttttttagcggaaatttaaaaac-caaagttcatcacatgcattttcttttctttttagcaaaacatgatat 225  Q
    |||||||||| ||| ||||    || |  |  ||  |    || |||||||  ||||||||||||||||||||||| || ||||||||||||||| ||||    
T  38264534 taacatttattaaaaaaataaaaaaaagatcattgactattatataaaaacaaaaagttcatcacatgcattttctattatttttagcaaaacataatat 38264435  T
Q  226 tcatacattacaataacaataaagat 251  Q
    ||||||||||||||||||| ||||||    
T  38264434 tcatacattacaataacaacaaagat 38264409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 47 - 244
Target Start/End: Original strand, 47140621 - 47140828
Alignment:
Q  47 tatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaa--ca 143  Q
    |||| ||||| || ||||||| | |||||||||||||||  |||||||||| || |||||||||| ||||||||||||||||||||||||||||||   |    
T  47140621 tatctatatccgcgcggatattcgtttagcgggtaatccgcggattttgaggtatccgcgggtttgtacagatatccatggataacatttataaaaataa 47140720  T
Q  144 aatcgtt-------aatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattac 236  Q
    |||  ||       | | |||||||||  ||||||| |||| || |||| ||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  47140721 aataatttttttaaatttttttttagctaaaatttagaaacaaaggttcttcacatgcattttcttttcattttagcaaaacataatatacatacattac 47140820  T
Q  237 aataacaa 244  Q
    || |||||    
T  47140821 aacaacaa 47140828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 251
Target Start/End: Complemental strand, 31585526 - 31585309
Alignment:
Q  46 ctatccatatctgcacggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttataaaacaa 144  Q
    |||||||||||  | ||||||||| |||||||||||||||   |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||  |    
T  31585526 ctatccatatcaacgcggatatccgtttagcgggtaatccgcagattttgaagtatccgcgggtttatacagatattcatggataacatttataaaaata 31585427  T
Q  145 a-----------tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacat 233  Q
    |           |  ||| | |||||||||  ||||||| |||| ||   |  |||||||||||||||||||||||||||||||||| |||| |||||||    
T  31585426 aaataaaaaatttgtttacttttttttagctaaaatttagaaacaaagagtattcacatgcattttcttttctttttagcaaaacataatatacatacat 31585327  T
Q  234 tacaataacaataaagat 251  Q
    ||||||||||| ||||||    
T  31585326 tacaataacaacaaagat 31585309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 251
Target Start/End: Complemental strand, 17563079 - 17562862
Alignment:
Q  46 ctatccatatctgcacggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttataaaacaa 144  Q
    |||||||||||  | |||| |||| |||||||||||||||   |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||  |    
T  17563079 ctatccatatcaacgcggacatccgtttagcgggtaatccgcagattttgaagtatccgcgggtttatacagatattcatggataacatttataaaaata 17562980  T
Q  145 a-----------tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacat 233  Q
    |           |  ||| | |||||||||  ||||||| |||| ||   |  |||||||||||||||||||||||||||||||||| |||| |||||||    
T  17562979 aaataaaaaatttgtttacttttttttagctaaaatttagaaacaaagagtattcacatgcattttcttttctttttagcaaaacataatatacatacat 17562880  T
Q  234 tacaataacaataaagat 251  Q
    ||||||||||| ||||||    
T  17562879 tacaataacaacaaagat 17562862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 36728931 - 36728829
Alignment:
Q  149 ttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaa 248  Q
    ||||| ||||||| | |||||||| |||| || |||| |||||||||||||||||||||||||||||||||| |||| || ||||||||||||||| |||    
T  36728931 ttaattttttttaactgaaatttagaaacaaatgttcttcacatgcattttcttttctttttagcaaaacataatatccacacattacaataacaacaaa 36728832  T
Q  249 gat 251  Q
    |||    
T  36728831 gat 36728829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 25987352 - 25987437
Alignment:
Q  166 aaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    ||||||| |||| || |||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||    
T  25987352 aaatttagaaacaaaggttcttcacatgcattttcttttctttttagcaaaacataatattcatacattaaaataacaaaaaagat 25987437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 251
Target Start/End: Complemental strand, 48379385 - 48379166
Alignment:
Q  47 tatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaaa 145  Q
    |||||||||| |  |||||||| ||||||| ||||||||  ||||||| || || |||||||||||||||||||||||||||||||||||||||||  ||    
T  48379385 tatccatatccgtgcggatatcaatttagcaggtaatccgcggatttttaggtatccgcgggtttatacagatatccatggataacatttataaaaataa 48379286  T
Q  146 --------------tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatac 231  Q
                  | | |  | |||||||||  ||||||| |||| || |||| ||| ||| |||||||||||||||||||||||||| ||| ||||||    
T  48379285 aataaaatttttgtttgatttttttttttagctaaaatttagaaacaaaggttcttcatatgtattttcttttctttttagcaaaacatcatagtcatac 48379186  T
Q  232 attacaataacaataaagat 251  Q
    ||||||||||||| ||||||    
T  48379185 attacaataacaacaaagat 48379166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 244
Target Start/End: Complemental strand, 2192099 - 2191879
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatgga 127  Q
    |||||||||||  ||| ||||||||||| || || | ||||||||||| | |||||||  ||||||||| || | ||| ||||||||||||||||||| |    
T  2192099 aatatgaaatctatgtcctatccatatccgcgcgaacatccatttagcagataatccacagattttgaggtatctgcgagtttatacagatatccatgaa 2192000  T
Q  128 taacatttataa-----aacaaatcg---ttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaaca 219  Q
    ||  ||||||||     || |||  |   ||||| ||||||||| ||||||||||||    |||| | ||||||||||||||||||||||||| ||||||    
T  2191999 tactatttataataataaaaaaaaagatattaattttttttagctgaaatttaaaaa----agttgaccacatgcattttcttttctttttagtaaaaca 2191904  T
Q  220 tgatattcatacattacaataacaa 244  Q
    | ||||   ||||||||||||||||    
T  2191903 taatatcactacattacaataacaa 2191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 11894270 - 11894339
Alignment:
Q  182 gttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||| ||| ||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||    
T  11894270 gttcttcatatgcattttcttttctttttaacaaaacataatattcatacattataataacaacaaagat 11894339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 36729032 - 36728951
Alignment:
Q  61 cggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaa 141  Q
    ||||||||| ||||||||||| |||  |||||||||  || |||| |||| ||||| |||| ||||||||||||||||||||    
T  36729032 cggatatccgtttagcgggtagtccgcggattttgacatatccgcaggttcatacaaatattcatggataacatttataaaa 36728951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 25294205 - 25294169
Alignment:
Q  61 cggatatccatttagcgggtaatccatggattttgag 97  Q
    |||||||||||||||||| ||||||||||||||||||    
T  25294205 cggatatccatttagcggataatccatggattttgag 25294169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 52252592 - 52252679
Alignment:
Q  106 ggtttatacagatatccatggataacatttataaaacaaatcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgc 194  Q
    |||||||||| ||||| |||||||| |||| ||||| |||| |||||  |||||||||  |||||||||||| ||| ||||||| ||||    
T  52252592 ggtttatacatatatcaatggataatattt-taaaaaaaattgttaactttttttagctaaaatttaaaaacaaaatttcatcatatgc 52252679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 46 - 251
Target Start/End: Complemental strand, 2944365 - 2944156
Alignment:
Q  46 ctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacattt---ataaaa 141  Q
    |||| ||||||||  | ||||||| |||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||| ||||   ||||||    
T  2944365 ctattcatatctgtccagatatccgtttagcgggtaatccacggattttgaggtatccgcgggtttatacagatatccatggataatatttataataaaa 2944266  T
Q  142 caaatcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataa 241  Q
     || | |||||  |||||||    ||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||  ||| ||| |||||||||||    
T  2944265 aaatttgttaaatttttttacttaaaaattaaaaacaaaagttcatcacatgcattttcttttctttttagcaaaatatagtatccatgcattacaataa 2944166  T
Q  242 caataaagat 251  Q
    ||| ||||||    
T  2944165 caacaaagat 2944156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 40910676 - 40910573
Alignment:
Q  148 gttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataa 247  Q
    |||||| |||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||    
T  40910676 gttaattttttttagctaaaatttaaaaacaaaagttcatcacatgcattttcttttctttttagcaaaacgtaatattcatacattacaataacaacaa 40910577  T
Q  248 agat 251  Q
    ||||    
T  40910576 agat 40910573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 64 - 251
Target Start/End: Original strand, 36298628 - 36298824
Alignment:
Q  64 atatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaa---------atcgttaat 153  Q
    ||||||||||||||||||||| | | |||||||| || ||| |  ||||||||||||||||||||||||| |||||||| ||         || ||||||    
T  36298628 atatccatttagcgggtaatctacgaattttgaggtatccgtgaatttatacagatatccatggataacacttataaaaaaattaaaaaaaattgttaat 36298727  T
Q  154 attttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
     ||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||| ||| |||| |||| ||||||||||||| ||||||    
T  36298728 -ttttttagctgaaatttaaaaaccaaagtttatcacgtgcattttattttctttttagcaaaccataatatccatatattacaataacaacaaagat 36298824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 115 - 251
Target Start/End: Original strand, 47924883 - 47925026
Alignment:
Q  115 agatatccatggataacatttataaaacaaatcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttc----ttttcttttt 210  Q
    ||||||||||| |||||||||||| || |||| ||||||||||||| ||  |||||||||||| ||||||||||||||||||||||    |||| |||||    
T  47924883 agatatccatgaataacatttatacaaaaaattgttaatatttttttgctaaaatttaaaaacaaaagttcatcacatgcattttccttttttttttttt 47924982  T
Q  211 agcaaaacatgatattcatacatt---acaataacaataaagat 251  Q
    |||||||||| |||| ||||||||   |||||||||||||||||    
T  47924983 agcaaaacataatatacatacattacaacaataacaataaagat 47925026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 62 - 249
Target Start/End: Complemental strand, 22519471 - 22519281
Alignment:
Q  62 ggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaaatc-gttaatattttt 159  Q
    ||||||||||||||| ||||||||| | ||||| || || |  |||||||||||| ||||||||||||| ||||||||||| ||||  |||||| |||||    
T  22519471 ggatatccatttagcaggtaatccacgaattttaaggtatcatcgggtttatacaaatatccatggatatcatttataaaaaaaatgtgttaattttttt 22519372  T
Q  160 t-agcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaag 249  Q
    | |||   ||||||||||| ||||| |||| ||||||| ||||||||||||||| ||||||| ||||  ||||||||||| ||||| ||||    
T  22519371 ttagctataatttaaaaacaaaagtgcatctcatgcatattcttttctttttagaaaaacataatatctatacattacaaaaacaacaaag 22519281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 251
Target Start/End: Complemental strand, 30541794 - 30541567
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| ||   ||||||||||| || |||||||||||| | || ||| ||| ||||||||||| || |||| |||||||||||||||||||| |    
T  30541794 aatatgaaatccgtaccctatccatatccgcgcggatatccattgaacgagtactccgtggattttgaggtatccgcaggtttatacagatatccatgaa 30541695  T
Q  128 taacatttataaaacaaa------tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatg 221  Q
    |  ||||||||||| ||       |  || ||  ||||||||  ||||||| |||   | ||||||||||||||||||||||| |||||||||||||||     
T  30541694 t--catttataaaaaaataattttttttttattctttttagctaaaatttagaaaaataggttcatcacatgcattttcttttatttttagcaaaacata 30541597  T
Q  222 atattcatacattacaataacaataaagat 251  Q
    ||||||||||||||||||||||| ||||||    
T  30541596 atattcatacattacaataacaacaaagat 30541567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 15954800 - 15954715
Alignment:
Q  166 aaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||| ||||||    
T  15954800 aaatttaaaaacaaaagttcatcacatgcattttcttttctttttagcaaaacataatagacatacatgacaataacaacaaagat 15954715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 251
Target Start/End: Complemental strand, 23809991 - 23809756
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| ||   ||||||||||| |   |||||||||||||||| |||||||| ||||||| || || ||||| ||||||||||||||||||  |    
T  23809991 aatatgaaatccgtaccctatccatatccgtggggatatccatttagcgagtaatccacggatttttaggtatccgcgagtttatacagatatccataaa 23809892  T
Q  128 taacatttataaaac---------aaatcgttaa---tattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaa 215  Q
    ||||||||||||||          |||| ||| |   | |||||||||  ||||| | |||| || |||| |||||||||||| ||||||||||||||||    
T  23809891 taacatttataaaaataaaataaaaaattgtttaattttttttttagctaaaattcataaacaaaggttcttcacatgcatttacttttctttttagcaa 23809792  T
Q  216 aacatgatattcatacattacaataacaataaagat 251  Q
    ||||| || |||||||||||||||||||| ||||||    
T  23809791 aacatcatgttcatacattacaataacaacaaagat 23809756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 251
Target Start/End: Original strand, 25501992 - 25502190
Alignment:
Q  63 gatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaa-------caaatcgttaata 154  Q
    ||||||| ||||||  |||||||| | |||||||| || |||||||||||||||||||||||||||||||||||||||||        |||    |||||    
T  25501992 gatatccgtttagctagtaatccacgaattttgaggtatccgcgggtttatacagatatccatggataacatttataaaaataaaataaaaaacataata 25502091  T
Q  155 t--tttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |  ||||||||  ||||||| |||| || |||| ||| ||||||||| ||||||||||||||||| || |||||||||||||||| |||||| ||||||    
T  25502092 ttctttttagctaaaatttagaaacaaaggttcttcagatgcattttattttctttttagcaaaatataatattcatacattacattaacaacaaagat 25502190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 31457225 - 31457298
Alignment:
Q  171 taaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaa 244  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  31457225 taaaaacaaaagttcatcacatgcattttcttttctttttagcaaaacataatattcatgcattacaataacaa 31457298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 251
Target Start/End: Complemental strand, 11039482 - 11039267
Alignment:
Q  47 tatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaac--- 142  Q
    |||||||||| |  ||| ||||| || |||||||| |||| | |||||||| || | |||||||||||||||||||||||||| ||||||||||||        
T  11039482 tatccatatccgtgcgggtatccgttcagcgggta-tccacgaattttgaggtatctgcgggtttatacagatatccatggatgacatttataaaaataa 11039384  T
Q  143 ------aaatc-gttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttctttt-ctttttagcaaaacatgatattcatacatt 234  Q
          ||||| ||| || ||||||||   ||||||| |||  || |||| |||||||||||||||||| |||||||||||||||| ||||||||| |||    
T  11039383 aataaaaaatctgtttattttttttagataaaatttagaaataaaggttcttcacatgcattttctttttctttttagcaaaacataatattcatagatt 11039284  T
Q  235 acaataacaataaagat 251  Q
    |||||||||||||||||    
T  11039283 acaataacaataaagat 11039267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 244
Target Start/End: Original strand, 33189208 - 33189433
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||  |||  ||||| ||||| ||| |||||||| ||||||||||||||||| |||||||| |||  | || |||||||||||||||||||||    
T  33189208 aatatgaaatatgtgccctatcaatatccgcatggatatccgtttagcgggtaatccatagattttgaggtattcacgagtttatacagatatccatgga 33189307  T
Q  128 taacattt------ataaaacaaa----tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaa 217  Q
    ||||||||      |||||| |||    | ||| |  |||||||||  ||||| | |||| || |||| |||||||  ||||||||||||||||| ||||    
T  33189308 taacatttaaaaaaataaaataaaaaatttgtttaatttttttagctaaaattcagaaacaaaggttcttcacatgtgttttcttttctttttagaaaaa 33189407  T
Q  218 catgatattcatacattacaataacaa 244  Q
    ||| ||| |||||||||||||||||||    
T  33189408 cataata-tcatacattacaataacaa 33189433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 5972915 - 5973010
Alignment:
Q  155 ttttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||||||||  ||||||| |||| || |||| ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||    
T  5972915 ttttttagctaaaatttagaaac-aaggttcttcacaggcattttcttttcattttagcaaaacataatattcatacattacaataacaaaaaagat 5973010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 38440618 - 38440522
Alignment:
Q  155 ttttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||||||||  ||||||| |||| ||  ||| ||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  38440618 ttttttagctaaaatttagaaacaaagattcttcacatggattttcttttctttttagtaaaacataatattcatacattacaataacaacaaagat 38440522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 7767028 - 7767106
Alignment:
Q  166 aaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaa 244  Q
    ||||||| |||| || |||| | |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  7767028 aaatttagaaacaaaggttctttacatgcattttcttttctttttagcaaaacattatattcatagattacaataacaa 7767106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 251
Target Start/End: Complemental strand, 1053331 - 1053199
Alignment:
Q  108 tttatacagatatccatggataacatttataaaacaaatcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctt 207  Q
    ||||||| |||||||||||||||||| ||||||| |||| ||      |||||||| ||||||||||||||||| ||| |      ||||||||||| ||    
T  1053331 tttatacggatatccatggataacatatataaaa-aaattgta-----tttttagctgaaatttaaaaaccaaatttccta-----cattttcttttatt 1053243  T
Q  208 tttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||    
T  1053242 tttagcaaaacataatattcatacattacgataacaacaaagat 1053199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 27336789 - 27336868
Alignment:
Q  61 cggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttataa 139  Q
    |||||||||||||||||| ||||||||||||||||| ||| || ||| ||||||| ||||||||||||||||||| ||||    
T  27336789 cggatatccatttagcggataatccatggattttgaggtatccacggatttatacggatatccatggataacattcataa 27336868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 141
Target Start/End: Complemental strand, 38440738 - 38440647
Alignment:
Q  51 catatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaa 141  Q
    |||||| || || ||||||||||||| |||||| | ||||||||||| || | || ||||||||||||||||||| ||||||||||||||||    
T  38440738 catatccgcgcgaatatccatttagcaggtaattcgtggattttgaggtatctgcaggtttatacagatatccatagataacatttataaaa 38440647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 36470100 - 36470022
Alignment:
Q  166 aaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaata 246  Q
    |||||||| ||| |||||||||||||| |||||||  ||||||||| | ||| || |||| ||||||||||||||||||||    
T  36470100 aaatttaacaacaaaagttcatcacattcattttc--ttctttttacccaaatataatatccatacattacaataacaata 36470022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 7766908 - 7766984
Alignment:
Q  62 ggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttat 137  Q
    |||||||| |||||||||||||||   |||||||| |||  |||| |||||||||||| ||||||||||||||||||    
T  7766908 ggatatccgtttagcgggtaatccgcagattttgaagtattcgcgcgtttatacagatttccatggataacatttat 7766984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 5972850 - 5972887
Alignment:
Q  101 ccgcgggtttatacagatatccatggataacatttata 138  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  5972850 ccgcgggtttatacaaatatccatggataacatttata 5972887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 251
Target Start/End: Original strand, 28636373 - 28636416
Alignment:
Q  208 tttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    ||||||||||||| |||||||||||||||||||| || ||||||    
T  28636373 tttagcaaaacataatattcatacattacaataaaaacaaagat 28636416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 31758949 - 31759012
Alignment:
Q  188 cacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    ||||| ||| |||||||||||||| |||||||| ||||  |||||||||||||| || ||||||    
T  31758949 cacatacatgttcttttctttttaacaaaacataatatatatacattacaataagaacaaagat 31759012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 8576565 - 8576799
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| ||  |||||||||||| || ||||||||||||||||| |||||||   ||||||||| || |||||||||||||||||||||||||||    
T  8576565 aatatgaaatccgtactctatccatatccgcgcggatatccatttagcgagtaatccgccgattttgaggtatccgcgggtttatacagatatccatgga 8576664  T
Q  128 taacatttata----------aaacaaatcgttaatatttt-ttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaa 216  Q
    |||||||||||          ||| || | ||| |  |||| |||||  ||||||| |||| || |||| ||||||||||||||||||||||||||||||    
T  8576665 taacatttataaaaataaaataaaaaatttgtttaccttttattagctaaaatttagaaacaaaggttcttcacatgcattttcttttctttttagcaaa 8576764  T
Q  217 acatgatattcatacattacaataacaataaagat 251  Q
    |||| ||||||||||||||||||||||| ||||||    
T  8576765 acataatattcatacattacaataacaacaaagat 8576799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 241
Target Start/End: Original strand, 7622197 - 7622403
Alignment:
Q  47 tatccatatctgcacggatatccatttagcgggtaatccatggattttgagt-acccgcgggtttatacagatatccatggataacatttataaaacaaa 145  Q
    |||||||||| ||  ||||||||||||||||| |||||| |||||||||||| | |||||||||||||||||||| ||||||||||||||||||||  ||    
T  7622197 tatccatatccgcgtggatatccatttagcggataatccgtggattttgagttatccgcgggtttatacagatattcatggataacatttataaaaataa 7622296  T
Q  146 -----------tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacatt 234  Q
               |  ||||| || ||||||  ||||||| ||||  | |||| |||||||||||||||||||||||||||||||||| |||| ||||||||    
T  7622297 aataaaaaatttgtttaattttctttagctaaaatttagaaacagaggttcttcacatgcattttcttttctttttagcaaaacataatatccatacatt 7622396  T
Q  235 acaataa 241  Q
    |||||||    
T  7622397 acaataa 7622403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 230
Target Start/End: Original strand, 28581980 - 28582169
Alignment:
Q  46 ctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttata--cagatatccatggataacatttataaaac 142  Q
    |||| |||||| || ||||||||| ||||||||||||||||   |||| ||| || |||||||||||||  ||||||||||||||||||||||||||||     
T  28581980 ctattcatatccgcgcggatatccgtttagcgggtaatccacatatttagaggtatccgcgggtttatatacagatatccatggataacatttataaaaa 28582079  T
Q  143 aaatcgttaatattttttagc--ggaaattt-aaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcata 230  Q
    |||| |||||  ||||||| |  | |||||| |||||  ||| |||||||||||||||||||||||||||||||||||||| |||| ||||    
T  28582080 aaat-gttaactttttttaacctgaaaatttaaaaaaaaaaaattcatcacatgcattttcttttctttttagcaaaacataatatccata 28582169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 35167993 - 35167912
Alignment:
Q  61 cggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaa 141  Q
    ||||||||| ||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  35167993 cggatatccgtttcgcgggtaatccgtggattttgaggtatccgcgggtttatacagatatccatggataacatttataaaa 35167912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 10409139 - 10409051
Alignment:
Q  155 ttttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaa 244  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||| ||||||||||||||||| || |||||||| ||||| ||||||||    
T  10409139 ttttttagctgaaaattaaaaactaaagttcatcacatgcatttt-ttttctttttagcaaaatataatattcatgcattataataacaa 10409051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 10788456 - 10788525
Alignment:
Q  182 gttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  10788456 gttcttcacatgcattttcttttctttttagcaaaacagaatattcatacattacaataacaacaaagat 10788525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 35167463 - 35167367
Alignment:
Q  155 ttttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||||||||  ||| ||| |||| || |||||||| |||||||||||||||||||||||||||||| |||| | |||||||||||||||| ||||||    
T  35167463 ttttttagctaaaagttagaaacaaaggttcatcatatgcattttcttttctttttagcaaaacataatatccgtacattacaataacaacaaagat 35167367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 141
Target Start/End: Complemental strand, 34435076 - 34434999
Alignment:
Q  65 tatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaa 141  Q
    ||||| ||||||||||||| | ||||||||||| || |||  ||||||||||||||||||||||||||||||||||||    
T  34435076 tatccgtttagcgggtaattcgtggattttgaggtatccgttggtttatacagatatccatggataacatttataaaa 34434999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 642234 - 642141
Alignment:
Q  152 atattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    ||||||||||||  ||||||| |||| |||| |||||||||||||||||||||     ||||||||||  ||||||||||||||||||||||| ||||||    
T  642234 atattttttagctaaaatttagaaac-aaaggtcatcacatgcattttctttt-----tagcaaaacaaaatattcatacattacaataacaacaaagat 642141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 5999398 - 5999461
Alignment:
Q  79 gtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaa 141  Q
    |||||||  |||||||||| || | |||||||||||||||||||||||||||||||||||||||    
T  5999398 gtaatccgcggattttgaggtatctgcgggtttatacagatatccatggataacatttataaaa 5999461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 7245618 - 7245563
Alignment:
Q  196 ttttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||| |||| ||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  7245618 tttttttttttttttagtaaaacataatattcatacattacaataacaacaaagat 7245563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 34433768 - 34433714
Alignment:
Q  166 aaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacat 220  Q
    ||||||| |||| || |||||||| |||| |||||||||||||||||||||||||    
T  34433768 aaatttagaaacaaatgttcatcatatgcgttttcttttctttttagcaaaacat 34433714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 64 - 243
Target Start/End: Original strand, 2209389 - 2209575
Alignment:
Q  64 atatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaaa------tcgttaatatt 156  Q
    |||||| ||||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||| ||| |||      | |||||| ||    
T  2209389 atatccgtttagcgggtaatccatggattttgaggtatatgcgggtttatacagatatccatggataacatttattaaaaaaaaaaaacttgttaatttt 2209488  T
Q  157 ttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataaca 243  Q
    |||||||   ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| | ||||| | |||||||    
T  2209489 ttttagctagaatttaaaaacaaaagttcatcacatgcattttcttttctttttagcaaaacataatatccgtacatcataataaca 2209575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 23429049 - 23429283
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| ||   ||||||||||| |  ||||||||||||||||||| |||||| ||||||| || || ||||| ||||||||| |||||||||||    
T  23429049 aatatgaaatccgtaccctatccatatccgtgcggatatccatttagcgggcaatccacggatttttaggtatccgcgagtttatacatatatccatgga 23429148  T
Q  128 taacatttataaaacaaa-----------tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaa 216  Q
    ||||||||||||||  ||           |  |||||  ||||| ||  ||||||| |||| || |||| ||||||||||||||||||||||||||||||    
T  23429149 taacatttataaaaataaaataaaaaatttgtttaattgttttttgctaaaatttagaaacaaaggttcttcacatgcattttcttttctttttagcaaa 23429248  T
Q  217 acatgatattcatacattacaataacaataaagat 251  Q
    |||| ||||||||| || |||||||||| ||||||    
T  23429249 acataatattcatatatcacaataacaacaaagat 23429283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 63 - 250
Target Start/End: Complemental strand, 33742999 - 33742797
Alignment:
Q  63 gatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacattt------ataaaacaaa-----tcgtt 150  Q
    ||||||| ||||||||||||||| ||||||||||| ||   |||||||||||||||||||||||||||||||||      |||||| |||     |  ||    
T  33742999 gatatccttttagcgggtaatccgtggattttgaggtatatgcgggtttatacagatatccatggataacatttgtaaaaataaaataaaaattttgttt 33742900  T
Q  151 aatatttttta---gcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataa 247  Q
    ||| ||||||    ||  ||||||| |||| || |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  33742899 aattttttttgtttgctaaaatttagaaacaaaggttcttcacatgcattttcttttctttttaacaaaacataatattcatacattacaataacaataa 33742800  T
Q  248 aga 250  Q
    |||    
T  33742799 aga 33742797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 251
Target Start/End: Complemental strand, 35188909 - 35188674
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| || | ||||| ||||| |  || ||||||||||||||| ||||||||||||||| || || |||| |||||||||| |||||||||||    
T  35188909 aatatgaaatctgtatcctatctatatccgtgcgaatatccatttagcggataatccatggatttttaggtatccgcaggtttatacaaatatccatgga 35188810  T
Q  128 taacatttataaaa--caaat----------cgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaa 215  Q
    ||||||||||||||   ||||            ||||| ||||||| |  ||||||| |||| || |||  ||||||| |||||||||||||||||||||    
T  35188809 taacatttataaaaataaaataaaaaatttgttttaattttttttaactaaaatttagaaacaaaggttattcacatgtattttcttttctttttagcaa 35188710  T
Q  216 aacatgatattcatacattacaataacaataaagat 251  Q
    ||||| ||||||||| ||||||||||||| ||||||    
T  35188709 aacataatattcataaattacaataacaacaaagat 35188674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 39207300 - 39207198
Alignment:
Q  149 ttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaa 248  Q
    ||||| |||||||||  ||||||| |||| || |||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  39207300 ttaattttttttagctaaaatttagaaacaaaggttcttcacatgcaatttcttttctttttagcaaaacataatattcatacattacaataacaacaaa 39207201  T
Q  249 gat 251  Q
    |||    
T  39207200 gat 39207198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 244
Target Start/End: Original strand, 3926147 - 3926236
Alignment:
Q  155 ttttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaa 244  Q
    |||||||||  ||||||| |||| || |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3926147 ttttttagctaaaatttagaaacaaaggttcttcacatgcattttcttttctttttagcaaaacataatattcatacattacaataacaa 3926236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 42836831 - 42837020
Alignment:
Q  63 gatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaaa---------tcgttaa 152  Q
    |||||||||||| ||| ||||||  ||| ||| || || ||||||||||| |||||||| ||||||||||||||||||||  ||         | ||| |    
T  42836831 gatatccatttaacggataatccgaggagttttaggtatccgcgggtttacacagatattcatggataacatttataaaaataaataaaaaatttgttta 42836930  T
Q  153 tattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataac 242  Q
      |||||||||  ||||||| |||| || |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42836931 atttttttagctaaaatttagaaacaaaggttcttcacatgcattttcttttctttttagcaaaacataatattcatacattacaataac 42837020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 26621320 - 26621416
Alignment:
Q  148 gttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaa 244  Q
    |||||| || |||||  ||||||||||||| ||||||||||||||  |||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  26621320 gttaattttatttagatgaaatttaaaaacaaaagttcatcacatatattttcttttcttttttgcaaagcataatattcatacattacaataacaa 26621416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 40056830 - 40056909
Alignment:
Q  61 cggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttataa 139  Q
    |||||||||||||||||| ||||||||||||||||| ||| || ||| ||||||| ||||||||||||||||||| ||||    
T  40056830 cggatatccatttagcggataatccatggattttgaggtatccacggatttatacggatatccatggataacattcataa 40056909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 39800683 - 39800606
Alignment:
Q  63 gatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttataa 139  Q
    |||||||||||||||| ||||||||||||||||| ||| || ||| ||||||| ||||||||||||||||||| ||||    
T  39800683 gatatccatttagcggataatccatggattttgaggtatccacggatttatacggatatccatggataacattcataa 39800606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 42879169 - 42879088
Alignment:
Q  61 cggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaa 141  Q
    ||||||||| ||||||||||||||| | ||| ||||| ||  ||| |||||||||| |||| ||||||||||||||||||||    
T  42879169 cggatatccgtttagcgggtaatccgtagatgttgaggtattcgcaggtttatacatatattcatggataacatttataaaa 42879088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 3926081 - 3926121
Alignment:
Q  101 ccgcgggtttatacagatatccatggataacatttataaaa 141  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  3926081 ccgcgggtttatacgtatatccatggataacatttataaaa 3926121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 42879020 - 42878975
Alignment:
Q  206 tttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||    
T  42879020 tttttagcaaaatgtaatattcatacattacaataacaacaaagat 42878975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 8e-36; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 45 - 251
Target Start/End: Complemental strand, 27926920 - 27926702
Alignment:
Q  45 tctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaaca 143  Q
    |||||| |||||  ||||| ||||| |||| |||||||| ||| ||||||||| |||||||| ||||||||||||||| |||||||||||||||||||      
T  27926920 tctatctatatcgacacggttatccgtttaacgggtaatgcatagattttgagctacccgcgagtttatacagatatcgatggataacatttataaaaat 27926821  T
Q  144 aa-----------tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcataca 232  Q
    ||           |  ||||| | |||||||  ||||||| |||| || |||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  27926820 aaaataaaaaatttgtttaatttgttttagctaaaatttagaaacaaaggttcttcacatgcattttcttttctttttagcaaaacataatattcataca 27926721  T
Q  233 ttacaataacaataaagat 251  Q
    |||||||||||| ||||||    
T  27926720 ttacaataacaacaaagat 27926702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 13825723 - 13825957
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| ||   ||||||||||| || ||||||||||||||||||||||||   |||||||||| || | || ||||||||||||||||||||||    
T  13825723 aatatgaaatccgtaccctatccatatccgcgcggatatccatttagcgggtaatctgcggattttgagatatctgcaggtttatacagatatccatgga 13825822  T
Q  128 taacatttataaaacaaa-----------tcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaa 216  Q
    ||||||||||||||  ||           |  ||||| |||||||||  ||||||| |||| || |||| | | |||||||||||||| ||||||| |||    
T  13825823 taacatttataaaaataaattaaaaaatttgtttaattttttttagctaaaatttagaaacaaaggttcttgatatgcattttcttttatttttagtaaa 13825922  T
Q  217 acatgatattcatacattacaataacaataaagat 251  Q
    |||| ||||||||||||||||||||||| ||||||    
T  13825923 acataatattcatacattacaataacaacaaagat 13825957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 26187815 - 26187971
Alignment:
Q  101 ccgcgggtttatacagatatccatggataacatttataaaac-------aaatcgttaatattttttagcggaaatttaaaaaccaaagttcatcacatg 193  Q
    ||||| |||||||||||||| ||||||||| |||||||||||       |||| || || |||||||||| ||||||||||||| ||| |||||||||||    
T  26187815 ccgcgagtttatacagatattcatggataatatttataaaactaaaaaaaaattgtaaa-attttttagctgaaatttaaaaacaaaaattcatcacatg 26187913  T
Q  194 cattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||||||| |||||||| |||||| || ||||||||||||| ||||||||||||||||    
T  26187914 cattttctattctttttcgcaaaatataatattcatacattgcaataacaataaagat 26187971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 149 - 251
Target Start/End: Original strand, 5295155 - 5295257
Alignment:
Q  149 ttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaa 248  Q
    ||||| |||||||||  ||||||| |||| ||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  5295155 ttaattttttttagctaaaatttagaaacaaaagttcttcacatacattttcttttctttttagcaaaacataatattcatacattacaataacaacaaa 5295254  T
Q  249 gat 251  Q
    |||    
T  5295255 gat 5295257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 251
Target Start/End: Complemental strand, 25875003 - 25874784
Alignment:
Q  46 ctatccatatctgcacggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaa 144  Q
    ||||||||||| || |  |||||| |||||||||||||||  |||||||||| || ||| ||||||||||||||||||||||||||| |||||||||  |    
T  25875003 ctatccatatccgcgcaaatatccgtttagcgggtaatccgcggattttgaggtatccgtgggtttatacagatatccatggataacgtttataaaaata 25874904  T
Q  145 a-----------tcgttaa-tattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagc-aaaacatgatattcatac 231  Q
    |           |  |||| |||||||||||  ||||||| |||| || |||| ||||||||||||||||||||||||| | ||||||| ||||||||||    
T  25874903 aaataaaaaatttgtttaagtattttttagctaaaatttagaaacaaaggttcttcacatgcattttcttttctttttaacaaaaacataatattcatac 25874804  T
Q  232 attacaataacaataaagat 251  Q
    ||||||||||||| ||||||    
T  25874803 attacaataacaacaaagat 25874784  T

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Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 21287985 - 21288146
Alignment:
Q  101 ccgcgggtttatacagatatccatggataacatttataaaacaaa-----------tcgttaatattttttagcggaaatttaaaaaccaaagttcatca 189  Q
    |||||||||||||||||||||||||||||||||||||||||  ||           |  ||||| |||||||||  ||||||| |||| || |||| |||    
T  21287985 ccgcgggtttatacagatatccatggataacatttataaaaataaaataaaaaatttgtttaattttttttagctaaaatttagaaacaaaggttcttca 21288084  T
Q  190 catgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||| |||||||||||||    
T  21288085 catgcattttcttttctctttagcgaaacataatattcatacattacactaacaataaagat 21288146  T

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Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 195
Target Start/End: Original strand, 4127857 - 4127981
Alignment:
Q  70 atttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaaatcgttaatattttttagcggaaa 168  Q
    |||||| ||||||||||  ||||||||| || ||||||||||||||| ||||||||||||||||||||||||| | || |||||| ||||||||| ||||    
T  4127857 atttagggggtaatccacagattttgaggtatccgcgggtttatacatatatccatggataacatttataaaa-atattgttaat-ttttttagctgaaa 4127954  T
Q  169 tttaaaaaccaaagttcatcacatgca 195  Q
    ||||||||| ||||||| | |||||||    
T  4127955 tttaaaaacaaaagttctttacatgca 4127981  T

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Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 48251831 - 48251746
Alignment:
Q  165 gaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||    
T  48251831 gaaaattaaaaactaaa-ttcatcacatgcattttcttttctttttagcaaaacataatatccatacattacaataacaacaaagat 48251746  T

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Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 12148879 - 12148958
Alignment:
Q  61 cggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttataa 139  Q
    |||||||||||||||||| ||||| ||||||||||| ||| || ||  ||||||| ||||||||||||||||||| ||||    
T  12148879 cggatatccatttagcggataatcaatggattttgaggtatccacgaatttatacggatatccatggataacattcataa 12148958  T

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Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 3779042 - 3778988
Alignment:
Q  197 tttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| || ||||||    
T  3779042 tttcttttctttttagcaaaacataatattcatacactacaataataacaaagat 3778988  T

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Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 48251927 - 48251843
Alignment:
Q  62 ggatatccatttagcgggtaatccatggattttgag-tacccgcgggtttatacagatatccatggataacatttataaaacaaa 145  Q
    |||||||| |||||| ||||||||| | |||||||| || |  | |||||||||| ||||||||| ||||||||||||||| |||    
T  48251927 ggatatccgtttagcaggtaatccacgaattttgaggtatctactggtttatacatatatccatgaataacatttataaaaaaaa 48251843  T

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Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 36584227 - 36584324
Alignment:
Q  45 tctatccatatctgcacggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttataaaa 141  Q
    ||||| |||||| || |||||||||||||| ||| ||||||| | ||||||| |||   ||| ||||||||| ||||| ||| ||||| |||||||||    
T  36584227 tctattcatatccgcgcggatatccatttaacggataatccacgaattttgaggtatttgcgagtttatacaaatatctatgaataacttttataaaa 36584324  T

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Target: scaffold0041 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 62418 - 62521
Alignment:
Q  148 gttaatattttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataa 247  Q
    |||||| |||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||    
T  62418 gttaattttttttagctaaaatttaaaaacaaaagttcatcacatgcattttcttttctttttagcaaaacgtaatattcatacattacaataacaacaa 62517  T
Q  248 agat 251  Q
    ||||    
T  62518 agat 62521  T

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Target: scaffold0155 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 7065 - 6969
Alignment:
Q  155 ttttttagcggaaatttaaaaaccaaagttcatcacatgcattttcttttctttttagcaaaacatgatattcatacattacaataacaataaagat 251  Q
    |||||||||  ||||||  |||| || |||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||| ||||||    
T  7065 ttttttagctaaaattttgaaacaaaggttcttcacatgcattttcttttctttttagcaaaacataatattcatattttacaataacaacaaagat 6969  T

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Target: scaffold0155; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 7125 - 7092
Alignment:
Q  108 tttatacagatatccatggataacatttataaaa 141  Q
    ||||||||||||||||||||||||||||||||||    
T  7125 tttatacagatatccatggataacatttataaaa 7092  T

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Target: scaffold0057 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 66412 - 66525
Alignment:
Q  29 aatatgaaatcagtgttctatccatatctgcacggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatgga 127  Q
    ||||||||||| | |  |||||||||||||  || ||||  |||||||||||||| |||||||||||| ||| ||||||| |||||||||||||||||||    
T  66412 aatatgaaatctgagccctatccatatctgtgcgaatatttatttagcgggtaattcatggattttgaggtatccgcgggattatacagatatccatgga 66511  T
Q  128 taacatttataaaa 141  Q
    ||  ||||||||||    
T  66512 tactatttataaaa 66525  T

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Target: scaffold0115 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 204
Target Start/End: Original strand, 21911 - 22056
Alignment:
Q  61 cggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttat---aaaacaaatcgttaatatt 156  Q
    ||||||||||| |||||| ||||||||||||||||| ||| || ||| ||||||| ||||||||||||||||||| ||   |||| |||| ||| || ||    
T  21911 cggatatccatatagcggataatccatggattttgaggtatccacggatttatacggatatccatggataacattcataagaaaaaaaattgtttat-tt 22009  T
Q  157 ttttagcggaaatttaaaaaccaaagttcatcacatgcattttctttt 204  Q
    |||||| | |||||||||| | ||| ||||| ||||||||||| ||||    
T  22010 ttttag-gtaaatttaaaaccaaaaattcataacatgcattttttttt 22056  T

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Target: scaffold0691 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 7764 - 7843
Alignment:
Q  61 cggatatccatttagcgggtaatccatggattttga-gtacccgcgggtttatacagatatccatggataacatttataa 139  Q
    |||||||||||||||||| ||||| ||||||||||| ||| || ||  ||||||| ||||||||||||||||||| ||||    
T  7764 cggatatccatttagcggataatcaatggattttgaggtatccacgaatttatacggatatccatggataacattcataa 7843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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