View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1318_low_177 (Length: 206)
Name: NF1318_low_177
Description: NF1318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1318_low_177 |
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Alignment Details
Target: chr4 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 47052857 - 47053018
Alignment:
| Q |
18 |
caattatgatatactcgtctcgttaatcgtaaattcaacaatatagctttcaataatttcataatttacctatgtaatcatttannnnnnnacagtttta |
117 |
Q |
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| T |
47052857 |
caattatgatatactcgtatagttaatcggaaattcaacaatatagctttcaataatttcataatttacctatgtaatcatttatttttttacagtttta |
47052956 |
T |
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| Q |
118 |
actattacaatttttaactaacatgcatattccttaggagattcaaattataaaaactatat |
179 |
Q |
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| T |
47052957 |
actattacaatttttaactaacatgcatattccttaggagattcaaattataaaaactatat |
47053018 |
T |
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