View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1318_low_34 (Length: 489)

Name: NF1318_low_34
Description: NF1318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1318_low_34
NF1318_low_34
[»] chr6 (25 HSPs)
chr6 (4-288)||(19259090-19259374)
chr6 (332-436)||(14681156-14681260)
chr6 (331-434)||(9481181-9481284)
chr6 (344-436)||(32017778-32017869)
chr6 (328-434)||(21069510-21069617)
chr6 (355-429)||(3230143-3230217)
chr6 (332-436)||(9854161-9854263)
chr6 (332-436)||(15942410-15942515)
chr6 (344-429)||(24731947-24732035)
chr6 (344-436)||(33714495-33714591)
chr6 (355-436)||(19284152-19284233)
chr6 (351-434)||(9154898-9154982)
chr6 (337-386)||(10321738-10321787)
chr6 (332-436)||(21070810-21070915)
chr6 (328-436)||(17142911-17143019)
chr6 (344-436)||(18500327-18500418)
chr6 (344-436)||(24732212-24732303)
chr6 (332-407)||(15941303-15941378)
chr6 (344-406)||(26385578-26385640)
chr6 (344-429)||(30458912-30458998)
chr6 (334-384)||(34113591-34113641)
chr6 (331-436)||(26385277-26385382)
chr6 (376-436)||(9481456-9481516)
chr6 (345-436)||(17142689-17142781)
chr6 (344-384)||(18500655-18500695)
[»] chr2 (41 HSPs)
chr2 (332-462)||(12418971-12419100)
chr2 (332-462)||(12431031-12431160)
chr2 (327-436)||(33290044-33290153)
chr2 (332-436)||(30959946-30960049)
chr2 (330-453)||(13284665-13284793)
chr2 (328-436)||(23854684-23854792)
chr2 (331-462)||(30958683-30958813)
chr2 (330-436)||(23806226-23806332)
chr2 (329-436)||(42670714-42670823)
chr2 (344-429)||(26135829-26135914)
chr2 (332-436)||(19251471-19251574)
chr2 (323-451)||(19251729-19251856)
chr2 (344-436)||(21481013-21481105)
chr2 (322-436)||(15106341-15106453)
chr2 (322-436)||(17850577-17850690)
chr2 (344-462)||(44098870-44098988)
chr2 (332-436)||(33290323-33290425)
chr2 (353-429)||(13254518-13254594)
chr2 (352-436)||(17463365-17463449)
chr2 (345-436)||(39878115-39878206)
chr2 (344-462)||(23046719-23046837)
chr2 (329-425)||(17463089-17463184)
chr2 (344-436)||(30390471-30390563)
chr2 (328-424)||(34548570-34548665)
chr2 (344-434)||(26236371-26236460)
chr2 (330-424)||(42671005-42671099)
chr2 (355-436)||(20498770-20498849)
chr2 (344-429)||(26236139-26236224)
chr2 (344-436)||(26560828-26560921)
chr2 (344-436)||(17850860-17850952)
chr2 (328-436)||(22263188-22263295)
chr2 (332-399)||(13284412-13284479)
chr2 (344-436)||(22263465-22263559)
chr2 (344-398)||(13254748-13254802)
chr2 (323-436)||(26560547-26560658)
chr2 (344-428)||(15106079-15106163)
chr2 (370-429)||(20499026-20499085)
chr2 (346-453)||(21482137-21482243)
chr2 (331-436)||(26136091-26136196)
chr2 (330-379)||(23855025-23855074)
chr2 (332-415)||(28416170-28416251)
[»] chr1 (45 HSPs)
chr1 (328-462)||(17501978-17502111)
chr1 (317-451)||(42510000-42510133)
chr1 (332-462)||(16294195-16294325)
chr1 (332-436)||(17606582-17606684)
chr1 (332-436)||(33628964-33629068)
chr1 (333-436)||(42510288-42510392)
chr1 (351-436)||(4907236-4907321)
chr1 (344-434)||(18462298-18462387)
chr1 (328-436)||(39826320-39826428)
chr1 (332-407)||(17500769-17500844)
chr1 (355-436)||(24467901-24467982)
chr1 (355-436)||(39711096-39711176)
chr1 (344-436)||(8292816-8292908)
chr1 (344-436)||(24467641-24467732)
chr1 (321-429)||(33628679-33628787)
chr1 (344-436)||(37236730-37236822)
chr1 (344-436)||(39711346-39711438)
chr1 (344-436)||(52058282-52058374)
chr1 (355-436)||(29696832-29696912)
chr1 (355-436)||(48072235-48072316)
chr1 (331-436)||(52058010-52058115)
chr1 (328-436)||(34749379-34749487)
chr1 (344-436)||(39826062-39826154)
chr1 (345-450)||(18342279-18342382)
chr1 (323-399)||(21091780-21091857)
chr1 (332-429)||(26271166-26271263)
chr1 (344-436)||(4906974-4907066)
chr1 (332-436)||(27039638-27039741)
chr1 (344-436)||(29696577-29696668)
chr1 (328-436)||(30299505-30299613)
chr1 (344-399)||(17606316-17606371)
chr1 (344-435)||(26266427-26266518)
chr1 (330-436)||(39970919-39971026)
chr1 (344-434)||(43539623-43539713)
chr1 (388-429)||(215193-215234)
chr1 (344-436)||(8293081-8293174)
chr1 (351-436)||(18462558-18462643)
chr1 (351-436)||(34749157-34749241)
chr1 (332-436)||(20995942-20996045)
chr1 (350-434)||(30252174-30252258)
chr1 (344-436)||(30299244-30299335)
chr1 (323-436)||(7473782-7473896)
chr1 (327-413)||(16294044-16294129)
chr1 (355-424)||(48071984-48072053)
chr1 (354-386)||(20995720-20995752)
[»] chr8 (41 HSPs)
chr8 (348-434)||(21144781-21144867)
chr8 (332-436)||(21147936-21148041)
chr8 (332-436)||(14820568-14820672)
chr8 (332-436)||(38726687-38726791)
chr8 (344-434)||(26136697-26136787)
chr8 (344-436)||(5554881-5554973)
chr8 (344-436)||(10108382-10108474)
chr8 (332-436)||(10108644-10108748)
chr8 (332-428)||(40486629-40486724)
chr8 (344-462)||(21148184-21148302)
chr8 (331-436)||(43851664-43851768)
chr8 (344-436)||(30789520-30789611)
chr8 (330-436)||(14820293-14820398)
chr8 (344-429)||(10171424-10171509)
chr8 (332-453)||(39889619-39889740)
chr8 (344-429)||(42112997-42113081)
chr8 (344-436)||(5555143-5555235)
chr8 (344-436)||(7689797-7689889)
chr8 (344-436)||(30789781-30789873)
chr8 (332-462)||(20876995-20877123)
chr8 (327-429)||(35367405-35367508)
chr8 (332-453)||(20875698-20875817)
chr8 (327-397)||(40487727-40487797)
chr8 (327-436)||(7689519-7689627)
chr8 (332-409)||(22848547-22848624)
chr8 (333-413)||(21144575-21144655)
chr8 (332-436)||(8106028-8106130)
chr8 (351-436)||(17623161-17623245)
chr8 (329-429)||(18044110-18044208)
chr8 (328-429)||(39888477-39888578)
chr8 (344-436)||(43481588-43481681)
chr8 (332-436)||(26136959-26137062)
chr8 (344-436)||(42606027-42606119)
chr8 (332-407)||(1949652-1949726)
chr8 (327-428)||(14767501-14767603)
chr8 (332-462)||(38727983-38728112)
chr8 (344-436)||(42113258-42113347)
chr8 (356-436)||(2583594-2583675)
chr8 (353-429)||(2583341-2583417)
chr8 (357-424)||(26532807-26532875)
chr8 (332-424)||(28977619-28977711)
[»] chr3 (51 HSPs)
chr3 (327-436)||(14162145-14162253)
chr3 (332-436)||(36990934-36991037)
chr3 (332-436)||(37016374-37016477)
chr3 (328-436)||(35740813-35740919)
chr3 (344-436)||(16722003-16722095)
chr3 (332-462)||(32998382-32998510)
chr3 (330-436)||(5800879-5800984)
chr3 (332-413)||(35741882-35741962)
chr3 (344-436)||(9266987-9267079)
chr3 (344-436)||(14262048-14262140)
chr3 (322-436)||(14171860-14171974)
chr3 (332-436)||(3424774-3424879)
chr3 (344-429)||(19720345-19720430)
chr3 (327-436)||(43572384-43572493)
chr3 (344-429)||(45969927-45970012)
chr3 (344-436)||(14161883-14161975)
chr3 (344-424)||(14262322-14262402)
chr3 (344-436)||(45003508-45003600)
chr3 (350-436)||(21633170-21633256)
chr3 (332-436)||(30500043-30500145)
chr3 (332-436)||(3425923-3426026)
chr3 (344-436)||(11003744-11003836)
chr3 (344-424)||(30500327-30500406)
chr3 (326-429)||(49986521-49986625)
chr3 (331-434)||(5800604-5800707)
chr3 (322-436)||(16722265-16722379)
chr3 (344-436)||(19112776-19112869)
chr3 (344-429)||(19113046-19113131)
chr3 (344-436)||(20853707-20853800)
chr3 (351-424)||(38283569-38283642)
chr3 (344-436)||(45970189-45970282)
chr3 (344-436)||(20853970-20854061)
chr3 (344-428)||(33372418-33372502)
chr3 (350-436)||(45003770-45003855)
chr3 (351-436)||(43572665-43572749)
chr3 (344-436)||(4204721-4204812)
chr3 (332-436)||(14171587-14171690)
chr3 (335-407)||(27946112-27946183)
chr3 (344-436)||(33372678-33372770)
chr3 (344-436)||(52552962-52553054)
chr3 (327-428)||(15328742-15328844)
chr3 (322-436)||(35995668-35995782)
chr3 (344-397)||(35995988-35996041)
chr3 (344-436)||(49986802-49986894)
chr3 (352-428)||(17649292-17649367)
chr3 (344-392)||(27946183-27946231)
chr3 (332-436)||(32997207-32997310)
chr3 (393-436)||(38283824-38283867)
chr3 (351-403)||(24490226-24490278)
chr3 (332-364)||(36989830-36989862)
chr3 (332-364)||(37015270-37015302)
[»] scaffold0185 (1 HSPs)
scaffold0185 (344-438)||(3881-3975)
[»] chr4 (50 HSPs)
chr4 (332-462)||(36888928-36889056)
chr4 (330-462)||(43312207-43312339)
chr4 (332-436)||(9396973-9397076)
chr4 (344-436)||(9516622-9516714)
chr4 (344-436)||(12904759-12904850)
chr4 (332-436)||(12520637-12520743)
chr4 (345-436)||(46046698-46046789)
chr4 (344-433)||(48259835-48259924)
chr4 (344-436)||(9619253-9619345)
chr4 (345-436)||(9618993-9619084)
chr4 (328-407)||(43313515-43313593)
chr4 (344-436)||(3018023-3018116)
chr4 (344-429)||(9516891-9516976)
chr4 (328-429)||(15640712-15640812)
chr4 (344-429)||(31090342-31090427)
chr4 (344-436)||(26252511-26252603)
chr4 (332-436)||(36887680-36887784)
chr4 (330-436)||(31090058-31090165)
chr4 (345-436)||(38574242-38574333)
chr4 (322-424)||(41947142-41947242)
chr4 (327-436)||(31943945-31944054)
chr4 (344-436)||(15640989-15641082)
chr4 (328-436)||(3273894-3274000)
chr4 (332-436)||(31944224-31944328)
chr4 (344-436)||(34063994-34064086)
chr4 (332-436)||(50462670-50462774)
chr4 (332-436)||(53896446-53896549)
chr4 (345-436)||(35376176-35376266)
chr4 (350-436)||(37012981-37013066)
chr4 (344-429)||(3018293-3018376)
chr4 (344-436)||(13131952-13132045)
chr4 (344-436)||(20069574-20069664)
chr4 (344-424)||(9396711-9396791)
chr4 (344-436)||(31083371-31083463)
chr4 (344-436)||(35376402-35376493)
chr4 (344-391)||(31218300-31218347)
chr4 (334-436)||(37012709-37012811)
chr4 (344-428)||(41946977-41947058)
chr4 (332-397)||(46934071-46934136)
chr4 (335-424)||(48580152-48580241)
chr4 (344-436)||(38573981-38574072)
chr4 (344-392)||(51029091-51029139)
chr4 (357-436)||(7819040-7819118)
chr4 (345-436)||(13132215-13132304)
chr4 (332-399)||(18667601-18667668)
chr4 (345-392)||(46046443-46046490)
chr4 (333-462)||(36699472-36699603)
chr4 (335-429)||(48579869-48579963)
chr4 (344-385)||(3273633-3273674)
chr4 (344-436)||(48260025-48260116)
[»] scaffold0117 (1 HSPs)
scaffold0117 (335-436)||(12256-12357)
[»] chr7 (42 HSPs)
chr7 (332-429)||(33131633-33131730)
chr7 (344-436)||(28218190-28218283)
chr7 (344-436)||(28218437-28218529)
chr7 (344-436)||(41600232-41600324)
chr7 (345-436)||(6465868-6465958)
chr7 (344-436)||(12006553-12006644)
chr7 (330-434)||(20419534-20419638)
chr7 (330-429)||(20419817-20419917)
chr7 (328-428)||(23274921-23275020)
chr7 (331-434)||(23383498-23383602)
chr7 (345-436)||(20458705-20458795)
chr7 (344-429)||(20963775-20963859)
chr7 (330-435)||(41599956-41600061)
chr7 (332-436)||(7842445-7842543)
chr7 (344-436)||(23704935-23705026)
chr7 (330-436)||(16995198-16995303)
chr7 (327-436)||(38879718-38879828)
chr7 (331-436)||(38879998-38880100)
chr7 (355-436)||(12006814-12006895)
chr7 (344-429)||(25772612-25772697)
chr7 (344-436)||(1250480-1250572)
chr7 (332-435)||(14646924-14647028)
chr7 (344-436)||(23704674-23704765)
chr7 (344-436)||(48672553-48672645)
chr7 (353-435)||(14800931-14801013)
chr7 (353-435)||(15247923-15248005)
chr7 (371-436)||(24195070-24195135)
chr7 (350-436)||(44816851-44816939)
chr7 (344-429)||(7657981-7658068)
chr7 (344-436)||(20458965-20459056)
chr7 (344-436)||(25772376-25772467)
chr7 (344-407)||(23258228-23258290)
chr7 (344-435)||(23383775-23383866)
chr7 (354-428)||(6466087-6466161)
chr7 (355-436)||(10409648-10409728)
chr7 (344-429)||(33133418-33133502)
chr7 (344-436)||(33162809-33162902)
chr7 (345-436)||(20963507-20963599)
chr7 (344-436)||(48672289-48672383)
chr7 (355-435)||(14630359-14630437)
chr7 (344-428)||(48648274-48648357)
chr7 (337-436)||(48648503-48648600)
[»] chr5 (39 HSPs)
chr5 (328-436)||(23979175-23979283)
chr5 (321-436)||(17762556-17762672)
chr5 (344-436)||(24837181-24837273)
chr5 (329-436)||(7125915-7126021)
chr5 (329-436)||(18336730-18336836)
chr5 (345-436)||(41001627-41001717)
chr5 (332-462)||(41424516-41424646)
chr5 (323-436)||(14144175-14144288)
chr5 (331-436)||(31799639-31799744)
chr5 (344-436)||(6817135-6817226)
chr5 (344-436)||(14143914-14144005)
chr5 (332-436)||(22571077-22571181)
chr5 (344-436)||(29445080-29445171)
chr5 (327-436)||(14411692-14411801)
chr5 (344-429)||(24837450-24837535)
chr5 (332-436)||(28071771-28071876)
chr5 (344-436)||(17762295-17762386)
chr5 (332-462)||(28070466-28070594)
chr5 (357-435)||(14411941-14412018)
chr5 (344-429)||(18336479-18336565)
chr5 (337-436)||(993755-993851)
chr5 (351-436)||(7126191-7126276)
chr5 (344-429)||(29444818-29444903)
chr5 (344-429)||(31799921-31800005)
chr5 (344-436)||(24074315-24074407)
chr5 (345-436)||(994020-994111)
chr5 (344-429)||(4919271-4919355)
chr5 (363-436)||(24074576-24074649)
chr5 (332-436)||(20709486-20709589)
chr5 (344-436)||(24650973-24651065)
chr5 (350-436)||(41001374-41001457)
chr5 (354-436)||(4919011-4919094)
chr5 (358-436)||(20959365-20959441)
chr5 (332-462)||(41425699-41425830)
chr5 (376-436)||(6817395-6817455)
chr5 (332-436)||(27158991-27159094)
chr5 (344-422)||(27159245-27159320)
chr5 (344-428)||(30512300-30512383)
chr5 (344-428)||(30552640-30552723)
[»] scaffold0352 (2 HSPs)
scaffold0352 (344-436)||(5952-6045)
scaffold0352 (344-436)||(4679-4771)
[»] scaffold0157 (1 HSPs)
scaffold0157 (332-436)||(174-280)
[»] scaffold0449 (2 HSPs)
scaffold0449 (345-429)||(7480-7565)
scaffold0449 (344-450)||(7238-7344)
[»] scaffold0141 (2 HSPs)
scaffold0141 (332-436)||(8596-8700)
scaffold0141 (344-413)||(8337-8406)
[»] scaffold0809 (2 HSPs)
scaffold0809 (344-436)||(1684-1772)
scaffold0809 (356-436)||(1435-1514)
[»] scaffold0361 (2 HSPs)
scaffold0361 (344-436)||(4837-4928)
scaffold0361 (344-429)||(4574-4660)
[»] scaffold0176 (1 HSPs)
scaffold0176 (344-399)||(15939-15994)
[»] scaffold0881 (2 HSPs)
scaffold0881 (344-436)||(231-324)
scaffold0881 (358-407)||(520-569)
[»] scaffold0477 (1 HSPs)
scaffold0477 (344-436)||(5022-5113)


Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 4 - 288
Target Start/End: Original strand, 19259090 - 19259374
Alignment:
Q  4 cgactgatatgaatggaccaatttaaagccagagtgaagttttgtatggactatgaatgttatttatgaatgaaaatgacttgttgaggtatgaatattt 103  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19259090 cgactaatatgaagggaccaatttatagccagagtgaagttttgtatggactatgaatgttatttatgaatgaaaatgacttgttgaggtatgaatattt 19259189  T
Q  104 gcagattcatattttggaggatcaaagtggttgctgcagctggtgttgtgattcaaaagcttaatttttgatacagcaacctttgtaagtgttgtttgtt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19259190 gcagattcatattttggaggatcaaagtggttgctgcagctggtgttgtgattcaaaagcttaatttttgatacagcaacctttgtaagtgttgtatgtt 19259289  T
Q  204 ggtcatgaattaattaatatcatgttatgttgtgttttgtatgattgaaatagttgattgtgaaatgaaattgttatgaagtgta 288  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  19259290 agtcatgaattaattaatatcatgttatgttgtgttttgtatgattgaaatagttgattgtgaagtgaaattgttatggagtgta 19259374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 14681260 - 14681156
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||||||||||| |||||||||||||||||||||||| ||  || ||||||| || |||||||||| ||||||| | |||||||  ||||| ||||||||    
T  14681260 gggttaatactatttttggtccctgtaatattagcgaattttggctttagtctctgtaaaataaaatatttagactttgtccttgcaattttagattcct 14681161  T
Q  432 ccact 436  Q
    |||||    
T  14681160 ccact 14681156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 434
Target Start/End: Original strand, 9481181 - 9481284
Alignment:
Q  331 tgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcc 430  Q
    ||||| |||||  ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||  ||||||||||||||| | |||||||| ||||     
T  9481181 tgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattct 9481280  T
Q  431 tcca 434  Q
    ||||    
T  9481281 tcca 9481284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 32017869 - 32017778
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  32017869 cttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaa-aaaagatttagattttgtccctgtaatttcatattcttccact 32017778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 434
Target Start/End: Original strand, 21069510 - 21069617
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaa-tttagattatgtccttataatttcaga 426  Q
    ||||||||||||||   |||| ||||||||||||| ||||| ||||||||||||||||| ||||| |||||| |||||||| ||||| | |||| |||||    
T  21069510 ttttgggttaatacccattttagtccctgtaatatgagcgaattccggttttagtccctgtaaaaaaaaaaagtttagattctgtccctgtaatatcaga 21069609  T
Q  427 ttcctcca 434  Q
    ||| ||||    
T  21069610 ttcttcca 21069617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 3230217 - 3230143
Alignment:
Q  355 tgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    |||||||||||||| ||||| ||||||||||| |||||||||| ||||||||| ||||| |||||||||| ||||    
T  3230217 tgtaatattagcgaattccgattttagtccctgtaaaataaaagatttagattttgtccatataatttcatattc 3230143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 9854263 - 9854161
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||| ||||| ||||||||||||||||||| ||| |||||||||  || |||||  || |||||||||| ||||||| |||||||| |||| |    
T  9854263 gggttaatactgctttttgtccctgtaatattagcgaattctggttttagt--ctgtaaaaataataatttagattttgtccttgtaatttcatattctt 9854166  T
Q  432 ccact 436  Q
    |||||    
T  9854165 ccact 9854161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 15942515 - 15942410
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaa-aaatttagattatgtccttataatttcagattcc 430  Q
    ||||||||| || |||||||||||| ||||| ||||| ||||| ||||||||||| ||||| |||  |||||||||||||||  |||||||||| ||||     
T  15942515 gggttaatattatttttggtccctgcaatatgagcgaattccgattttagtccctataaaaaaaattaatttagattatgtctctataatttcatattct 15942416  T
Q  431 tccact 436  Q
    ||||||    
T  15942415 tccact 15942410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 429
Target Start/End: Original strand, 24731947 - 24732035
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctct---aaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| |   |||| |||||| ||||||| ||||| | |||||||||||||    
T  24731947 cttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaaaaattagattttgtccctgtaatttcagattc 24732035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 33714495 - 33714591
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttt--tagtccctctaaaataaaaa--atttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| |||||||||  |||||||| ||||| |||||  ||||||||| ||||||| |||||||| |||| ||||||    
T  33714495 cttttcgtccctgtaatattagcgaattccggttttatagtccctgtaaaaaaaaaaagatttagattttgtccttgtaatttcatattcttccact 33714591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 19284152 - 19284233
Alignment:
Q  355 tgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||||||| |||| ||||||||||   |||||||||| ||||||||| ||||| | ||||||||||||| ||||||    
T  19284152 tgtaatattagcgaattccagttttagtccacgtaaaataaaagatttagattttgtccctgtaatttcagattcttccact 19284233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 351 - 434
Target Start/End: Original strand, 9154898 - 9154982
Alignment:
Q  351 tccctgtaatatt-agcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctcca 434  Q
    ||||||||||||| ||||| ||||| ||||||||||| ||||| |||| ||||||||| ||||| | ||||||||||||| ||||    
T  9154898 tccctgtaatatttagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 9154982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 10321738 - 10321787
Alignment:
Q  337 aatactacttttggtccctgtaatattagcgatttccggttttagtccct 386  Q
    |||||| ||||| ||||||||||||||||||| |||||||||||||||||    
T  10321738 aatacttcttttcgtccctgtaatattagcgaattccggttttagtccct 10321787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 21070915 - 21070810
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaa-tttagattatgtccttataatttcagattcc 430  Q
    ||||||||||  ||||| ||||||||||||| ||||| ||||||| |||||| || ||||| |||||| |||||||| | ||| | |||| ||||||||     
T  21070915 gggttaataccccttttagtccctgtaatatgagcgaattccggtattagtctctgtaaaaaaaaaaagtttagattctatccctgtaatatcagattct 21070816  T
Q  431 tccact 436  Q
    ||||||    
T  21070815 tccact 21070810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 436
Target Start/End: Complemental strand, 17143019 - 17142911
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagat 427  Q
    |||||||||||||||  |  |||| | | |||||||||||| || |||||||||| ||  |||||||||||| || ||||| ||||| ||||||||| ||    
T  17143019 ttttgggttaatactgttcgtggttcttctaatattagcgaatttcggttttagttccagtaaaataaaaaaatttgattaggtcctaataatttcatat 17142920  T
Q  428 tcctccact 436  Q
    | |||||||    
T  17142919 ttctccact 17142911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 18500327 - 18500418
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||||| |||||||||||| || |||||||||||||| ||| | |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  18500327 cttttcgtccctataatattagcgaatttcggttttagtccctgtaaga-aaaagatttagattttgtccctgtaatttcatattcttccact 18500418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 24732303 - 24732212
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||   |||||||||| ||||| |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  24732303 cttttcgtccctgtaatattagcgaattcc-aatttagtccctgtaaaaaaaaagatttagattttgtccatgtaatttcatattcttccact 24732212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 15941303 - 15941378
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagatt 407  Q
    ||||||||||   |||||||||||| ||||| | ||| ||||||||||||||||| ||||| ||| ||||||||||    
T  15941303 gggttaataccgtttttggtccctgaaatatgatcgaattccggttttagtccctgtaaaaaaaataatttagatt 15941378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 406
Target Start/End: Complemental strand, 26385640 - 26385578
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagat 406  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||| |||||  ||| ||||||||    
T  26385640 cttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaacaaagatttagat 26385578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 429
Target Start/End: Original strand, 30458912 - 30458998
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattc 429  Q
    ||||| |||||||||||||||| || || |||||||||| ||  ||||| ||||| ||||||||||||||  | |||||||||||||    
T  30458912 cttttcgtccctgtaatattagtgaatttcggttttagttcccgtaaaaaaaaaagatttagattatgtcactgtaatttcagattc 30458998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 34113641 - 34113591
Alignment:
Q  334 gttaatactacttttggtccctgtaatattagcgatttccggttttagtcc 384  Q
    |||||||| | |||||||||||||||||||||||| || ||||||||||||    
T  34113641 gttaataccatttttggtccctgtaatattagcgaatttcggttttagtcc 34113591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 436
Target Start/End: Original strand, 26385277 - 26385382
Alignment:
Q  331 tgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcc 430  Q
    ||||| |||||  ||||| ||| ||||||||||||||| ||| ||||||||||| | || || |||| ||||||||| ||||| | |||||| | ||||     
T  26385277 tgggtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgtagaaaaaaagatttagattttgtccctgtaattttatattct 26385376  T
Q  431 tccact 436  Q
    ||||||    
T  26385377 tccact 26385382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 436
Target Start/End: Complemental strand, 9481516 - 9481456
Alignment:
Q  376 ttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||| |||||| ||||| |||| ||||||||| ||||||| ||||||||||||| ||||||    
T  9481516 ttttcgtccctgtaaaaaaaaagatttagattttgtccttgtaatttcagattcttccact 9481456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 436
Target Start/End: Original strand, 17142689 - 17142781
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaa-aatttagattatgtccttataatttcagattcctccact 436  Q
    ||||||| | |||||||||||||| || | | ||||||| || ||||| |||| |||||||||||||||| | |||||||| |||| ||||||    
T  17142689 ttttggttcatgtaatattagcgaatttcaggtttagtctctgtaaaaaaaaaaaatttagattatgtccctgtaatttcaaattcttccact 17142781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 384
Target Start/End: Complemental strand, 18500695 - 18500655
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtcc 384  Q
    ||||| ||||||||||||||||||| || ||||||||||||    
T  18500695 cttttcgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 6e-32; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 12419100 - 12418971
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||| ||||| |  |||||| |||||||    
T  12419100 gggttaataccacttttggtccctgtaatattagcgaattccggttttagtccctataaaa-aaaaagtttagattctgtccatgaaatttccgattcct 12419002  T
Q  432 ccactgtcagtccatcatttaagcatgtcag 462  Q
    ||||| | ||||| |||||||| ||||||||    
T  12419001 ccacttttagtccctcatttaaccatgtcag 12418971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 12431160 - 12431031
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||| ||||| |  |||||| |||||||    
T  12431160 gggttaataccacttttggtccctgtaatattagcgaattccggttttagtccctataaaa-aaaaagtttagattctgtccatgaaatttccgattcct 12431062  T
Q  432 ccactgtcagtccatcatttaagcatgtcag 462  Q
    ||||| | ||||| |||||||| ||||||||    
T  12431061 ccacttttagtccctcatttaaccatgtcag 12431031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 327 - 436
Target Start/End: Original strand, 33290044 - 33290153
Alignment:
Q  327 attttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcaga 426  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||| ||||||| |||||||| |    
T  33290044 atttagggttaatactgtttttggtccctgtaatattagcgaattccagttttagtccctgtaaaataaaaaatttagattctgtccttgtaatttcata 33290143  T
Q  427 ttcctccact 436  Q
     |||||||||    
T  33290144 ctcctccact 33290153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 30960049 - 30959946
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||| | ||||| ||||| |||||||||||||| | |||||||| ||||||    
T  30960049 gggttaataccacttttggtccctgtaatattagcgaattccggttttagtccatgtaaaa-aaaaagtttagattatgtccctgtaatttcatattcct 30959951  T
Q  432 ccact 436  Q
    |||||    
T  30959950 ccact 30959946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 13284793 - 13284665
Alignment:
Q  330 ttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataa---aaaat--ttagattatgtccttataatttca 424  Q
    ||||||||||||| ||||||||||||||||||||||||| || |||||||||||||| ||||||||   |||||   |||||| ||||||| ||||||||    
T  13284793 ttgggttaatactgcttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaataaaataaaataaatagattttgtccttgtaatttca 13284694  T
Q  425 gattcctccactgtcagtccatcatttaa 453  Q
    |||||||||||| |  |||| ||||||||    
T  13284693 gattcctccacttttggtccctcatttaa 13284665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 328 - 436
Target Start/End: Original strand, 23854684 - 23854792
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagat 427  Q
    ||||||||||||||  ||||| ||||||||||||||||||| || |||||||||||||| ||||| |||| ||||||||| ||||| | |||||||| ||    
T  23854684 ttttgggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatat 23854783  T
Q  428 tcctccact 436  Q
    || ||||||    
T  23854784 tcttccact 23854792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 462
Target Start/End: Original strand, 30958683 - 30958813
Alignment:
Q  331 tgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcc 430  Q
    ||||||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||| ||||| ||||||||   ||| ||| |||| ||||||     
T  30958683 tgggttaataccacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaa-aaaaagtttagatttcatccctatcatttgagattct 30958781  T
Q  431 tccactgtcagtccatcatttaagcatgtcag 462  Q
    |||||| |  |||||||| |||| | ||||||    
T  30958782 tccacttttggtccatcacttaaacttgtcag 30958813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 330 - 436
Target Start/End: Complemental strand, 23806332 - 23806226
Alignment:
Q  330 ttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    |||||| |||||  ||||| ||||||||||||||||||| || |||||||||||||| ||||| |||| ||||||||| ||||| | |||||||| ||||    
T  23806332 ttgggtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 23806233  T
Q  430 ctccact 436  Q
     ||||||    
T  23806232 ttccact 23806226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 436
Target Start/End: Original strand, 42670714 - 42670823
Alignment:
Q  329 tttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctct--aaaataaaaaatttagattatgtccttataatttcaga 426  Q
    |||||||||||||  ||||| |||||||||||| |||||| ||||||||||||||||| |  |||| |||||| ||||||| ||||||| |||||||| |    
T  42670714 tttgggttaatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgtaaaaaaaaaaaaaattagattttgtccttgtaatttcata 42670813  T
Q  427 ttcctccact 436  Q
    ||| ||||||    
T  42670814 ttcttccact 42670823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 429
Target Start/End: Original strand, 26135829 - 26135914
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||| ||||| |||| ||||||||| ||||| | |||||||||||||    
T  26135829 cttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattc 26135914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 19251471 - 19251574
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||| ||||||||||||||||||| || |||||||||||||| ||||| |||| ||||||||| ||||| | |||||||| |||| |    
T  19251471 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaa-aaaagatttagattttgtccctgtaatttcatattctt 19251569  T
Q  432 ccact 436  Q
    |||||    
T  19251570 ccact 19251574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 323 - 451
Target Start/End: Complemental strand, 19251856 - 19251729
Alignment:
Q  323 ttttattttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataattt 422  Q
    |||| ||| |||| |||||  ||||| |||| ||||||||||| || ||||||||||||||||| ||||| |||| ||||||||| ||||||| ||||||    
T  19251856 ttttttttagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaa-aaaagatttagattctgtccttgtaattt 19251758  T
Q  423 cagattcctccactgtcagtccatcattt 451  Q
    || |||| |||||| || |||| ||||||    
T  19251757 catattcttccactttcggtccctcattt 19251729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 21481013 - 21481105
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||| |||||||||| ||| |||| |||||||||| | ||||| ||||||||||||||||||||| || |||| |||||| ||||||    
T  21481013 cttttggtccttgtaatattaacgaattccagttttagtccttgtaaaaaaaaaaatttagattatgtcctcatcattttagattcttccact 21481105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 436
Target Start/End: Complemental strand, 15106453 - 15106341
Alignment:
Q  322 tttttattttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatt 421  Q
    ||||| |||||||| |||||  ||||| ||||| ||||||||||||| || || ||||||||||| ||||  |||||||||||||| ||||| | |||||    
T  15106453 ttttttttttgggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaa--aaaaaatttagattttgtccctgtaatt 15106356  T
Q  422 tcagattcctccact 436  Q
    |||||||| ||||||    
T  15106355 tcagattcttccact 15106341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 436
Target Start/End: Original strand, 17850577 - 17850690
Alignment:
Q  322 tttttattttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatt 421  Q
    ||||| |||||||| |||||  ||||| ||||||||||||||||||| ||||| ||||||||||| ||||| |||| ||||||||| ||||  | |||||    
T  17850577 ttttttttttgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctataaaa-aaaagatttagattttgtctctgtaatt 17850675  T
Q  422 tcagattcctccact 436  Q
    | |||||| ||||||    
T  17850676 taagattcttccact 17850690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 462
Target Start/End: Complemental strand, 44098988 - 44098870
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccactgtcagtc 443  Q
    ||||| ||||||||||||| ||||| ||| |||||| || ||| ||||| ||| |||||||||||||||| | ||||||||||||| |||||| | ||||    
T  44098988 cttttcgtccctgtaatatgagcgaattctggttttggttcctgtaaaaaaaataatttagattatgtccctgtaatttcagattcttccactttgagtc 44098889  T
Q  444 catcatttaagcatgtcag 462  Q
    | ||| |||| | ||||||    
T  44098888 cttcacttaaacttgtcag 44098870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 33290425 - 33290323
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||||||||||||||||||||||| ||| ||||||| ||||| ||||  |||||| ||||||| || |||| |||||||| |||| |    
T  33290425 gggttaataccgcttttggtccctgtaatattagcgaattctggttttaatccctgtaaa--aaaaaaattagattttgaccttgtaatttcatattctt 33290328  T
Q  432 ccact 436  Q
    |||||    
T  33290327 ccact 33290323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 429
Target Start/End: Original strand, 13254518 - 13254594
Alignment:
Q  353 cctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    |||||||||||||||| ||  ||||||| ||||| |||||||||| ||||||||| ||||||| |||||||||||||    
T  13254518 cctgtaatattagcgaattttggttttactccctgtaaaataaaagatttagattttgtccttgtaatttcagattc 13254594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 436
Target Start/End: Complemental strand, 17463449 - 17463365
Alignment:
Q  352 ccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | ||||| || |||| ||||||    
T  17463449 ccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattcttccact 17463365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 345 - 436
Target Start/End: Original strand, 39878115 - 39878206
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||| |||| |||||||||||||| ||||||||||||||||| ||||| || | |||||||||||||   | ||||||||||||| ||||||    
T  39878115 tttttgtccttgtaatattagcgaattccggttttagtccctgtaaaaaaagatatttagattatgtatctgtaatttcagattcttccact 39878206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 462
Target Start/End: Original strand, 23046719 - 23046837
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccactgtcagtc 443  Q
    ||||| |||| |||||||| ||||| |||||||||| ||| || ||||| ||| |||||||||| ||||| | ||||||||||||| |||||| | ||||    
T  23046719 cttttcgtccttgtaatatgagcgaattccggttttggtctctataaaaaaaataatttagattctgtccctgtaatttcagattcttccactttgagtc 23046818  T
Q  444 catcatttaagcatgtcag 462  Q
    | ||| |||| | ||||||    
T  23046819 cttcacttaaacttgtcag 23046837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 17463089 - 17463184
Alignment:
Q  329 tttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcag 425  Q
    ||||||| |||| | ||||| |||||| |||||||||||| |||||||||||||| || ||||| |||||| ||||||| ||||| | |||||||||    
T  17463089 tttgggtaaatagttcttttcgtccctataatattagcgaattccggttttagtcgctgtaaaa-aaaaaaattagattttgtccctgtaatttcag 17463184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 30390471 - 30390563
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||| |||||||||||||| ||||| ||||| ||||| ||||| |||||| ||||||| ||||| | |||||||| |||| ||||||    
T  30390471 cttttcgtccatgtaatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattcttccact 30390563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 424
Target Start/End: Original strand, 34548570 - 34548665
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttca 424  Q
    |||||||| |||||| ||||| |||||||||||||||| || ||  ||||||||||||| ||||| |||| ||||||||| ||||| | ||||||||    
T  34548570 ttttgggtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaa-aaaagatttagattttgtccatgtaatttca 34548665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 344 - 434
Target Start/End: Complemental strand, 26236460 - 26236371
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctcca 434  Q
    ||||| ||||||||||||||||||| || |||||||||||| |  |||| |||| ||||||||| ||||| | ||||||||||||| ||||    
T  26236460 cttttcgtccctgtaatattagcgaatttcggttttagtccttggaaaa-aaaagatttagattttgtccctgtaatttcagattcttcca 26236371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 330 - 424
Target Start/End: Complemental strand, 42671099 - 42671005
Alignment:
Q  330 ttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttca 424  Q
    |||||| |||||  ||||| ||||||||| ||||||||| || | |||||||||||| ||||| |||  ||||||||||||||| | ||||||||    
T  42671099 ttgggtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttca 42671005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 20498770 - 20498849
Alignment:
Q  355 tgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||||||| || |||||||||||||| ||||| |||| ||||||||||||||| | | ||||||||||| ||||||    
T  20498770 tgtaatattagcgaattacggttttagtccctgtaaaa-aaaatatttagattatgtccctgt-atttcagattcttccact 20498849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 429
Target Start/End: Original strand, 26236139 - 26236224
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| |||| |||||||||||||| ||| ||||||||||||| || || |||| ||||| ||| ||||| | |||||||||||||    
T  26236139 cttttcgtccttgtaatattagcgaattctggttttagtccctgtataaaaaaagatttatattttgtccctgtaatttcagattc 26236224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 26560921 - 26560828
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctct-aaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||| |||||||||||||| ||||| ||||||||||  | |||| |||||| ||||||| ||||| |||||||||| |||| ||||||    
T  26560921 cttttcgtccttgtaatattagcgaattccgattttagtcccggtaaaaaaaaaaaaattagattttgtccatataatttcatattcttccact 26560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 17850952 - 17850860
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| || ||||||||||| || ||||  |||   |||||||| ||||| | ||||||||||||| ||||||    
T  17850952 cttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagattcttccact 17850860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 436
Target Start/End: Original strand, 22263188 - 22263295
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagat 427  Q
    ||||||||||||||  |||||  ||||||||||||||| || ||| |||||||||| || | ||| |||| ||||||||| ||||| | |||||||| ||    
T  22263188 ttttgggttaatacatcttttcatccctgtaatattagagaattctggttttagtctctatgaaa-aaaagatttagattttgtccctgtaatttcatat 22263286  T
Q  428 tcctccact 436  Q
    || ||||||    
T  22263287 tcttccact 22263295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 399
Target Start/End: Original strand, 13284412 - 13284479
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaa 399  Q
    |||||||||| |||||| ||||||||||||| ||||| ||||||||||||  ||| ||||| ||||||    
T  13284412 gggttaataccactttttgtccctgtaatatcagcgaattccggttttagcacctgtaaaaaaaaaaa 13284479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 22263559 - 22263465
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa--atttagattatgtccttataatttcagattcctccact 436  Q
    ||||| || |||||||||||||||| |||||||||||||| || ||||| |||||  ||| ||||| ||||| | |||||||| |||| ||||||    
T  22263559 cttttcgttcctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaaagattcagattttgtccctgtaatttcatattcttccact 22263465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 398
Target Start/End: Complemental strand, 13254802 - 13254748
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa 398  Q
    ||||| ||||||||||||||||||| |||||||||||||| || ||||| |||||    
T  13254802 cttttcgtccctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaa 13254748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 436
Target Start/End: Original strand, 26560547 - 26560658
Alignment:
Q  323 ttttattttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataattt 422  Q
    |||| ||| |||||||||   ||||| ||||||||||||||| ||| || || ||||||||||| ||||  |||| |||||||||  |||| | ||||||    
T  26560547 ttttttttagggttaatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgtaaa--aaaagatttagatttagtccctgtaattt 26560644  T
Q  423 cagattcctccact 436  Q
    ||||||| ||||||    
T  26560645 cagattcttccact 26560658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 428
Target Start/End: Original strand, 15106079 - 15106163
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagatt 428  Q
    ||||| ||||| ||||||||||||| || |||||||| ||||| ||||  |||| ||||||||| ||||| | |||||| |||||    
T  15106079 cttttcgtccccgtaatattagcgaatttcggttttaatccctgtaaataaaaagatttagattttgtccctgtaattttagatt 15106163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 429
Target Start/End: Complemental strand, 20499085 - 20499026
Alignment:
Q  370 ttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    |||||||||||||| || ||||| |||| ||||||||| ||||| | |||||||||||||    
T  20499085 ttccggttttagtcactgtaaaaaaaaagatttagattttgtccctgtaatttcagattc 20499026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 453
Target Start/End: Complemental strand, 21482243 - 21482137
Alignment:
Q  346 tttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccactgtcagtcca 445  Q
    ||||||| ||||||||||||||| |||| |||||||||| | ||||| ||| | |||||||| ||||| | | |||| |||||| |||||| | |||||     
T  21482243 tttggtctctgtaatattagcgaattccagttttagtccttgtaaaa-aaatagtttagattttgtccctgtcattttagattcttccacttttagtccc 21482145  T
Q  446 tcatttaa 453  Q
    ||| ||||    
T  21482144 tcaattaa 21482137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 436
Target Start/End: Complemental strand, 26136196 - 26136091
Alignment:
Q  331 tgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattc 429  Q
    ||||| |||||  ||||| |||| |||||||||| ||| || |||||||||| ||| ||||| ||||| ||||||||| |||| || |||||||| ||||    
T  26136196 tgggtaaatacctcttttcgtccttgtaatattaacgaatttcggttttagt-cctgtaaaaaaaaaagatttagattttgtcattgtaatttcatattc 26136098  T
Q  430 ctccact 436  Q
     ||||||    
T  26136097 ttccact 26136091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 23855074 - 23855025
Alignment:
Q  330 ttgggttaatactacttttggtccctgtaatattagcgatttccggtttt 379  Q
    |||||| |||||  ||||| ||||||||||||||||||| ||||||||||    
T  23855074 ttgggtaaatacctcttttcgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 415
Target Start/End: Complemental strand, 28416251 - 28416170
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtcctt 415  Q
    |||||||||| ||||||||||||| ||||||||| || || || |||| |||| | ||||  ||||| |||||||| |||||||    
T  28416251 gggttaataccacttttggtccctttaatattagtgaatttcgattttggtccttgtaaa--aaaaagtttagattttgtcctt 28416170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 328 - 462
Target Start/End: Complemental strand, 17502111 - 17501978
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagat 427  Q
    |||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||| |||||||| ||||| | |||||||||||    
T  17502111 ttttgggttaatatcacttttggtccttgtaatattagcgaattccggttttagtccctataaaa-aaaaagtttagattctgtccctgtaatttcagat 17502013  T
Q  428 tcctccactgtcagtccatcatttaagcatgtcag 462  Q
    ||||||||| | ||||| || ||||| | ||||||    
T  17502012 tcctccacttttagtccctcgtttaaccctgtcag 17501978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 317 - 451
Target Start/End: Original strand, 42510000 - 42510133
Alignment:
Q  317 gaccctttttattttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtcctta 416  Q
    |||| ||||| |||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||| ||||| ||| |||||||||| ||||| |     
T  42510000 gacctttttttttttgggttaatactactttttatccctgtaatattagcgaattccggttttaatccctgtaaaa-aaataatttagattttgtccctg 42510098  T
Q  417 taatttcagattcctccactgtcagtccatcattt 451  Q
    |||||||| |||| |||||| | ||||| ||||||    
T  42510099 taatttcatattcttccacttttagtccctcattt 42510133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 16294325 - 16294195
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||||||||||  ||||||||  |||||||||||| | || || ||||||||||| |||||||||||||||||||| ||||||| |||||||| ||||||    
T  16294325 gggttaatactgtttttggtctatgtaatattagcaaatttcgattttagtccctgtaaaataaaaaatttagattttgtccttgtaatttcatattcct 16294226  T
Q  432 ccactgtcagtccatcatttaagcatgtcag 462  Q
    ||||| |  |||| | |||||| ||||||||    
T  16294225 ccacttttggtcccttatttaaccatgtcag 16294195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 17606684 - 17606582
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||| ||||  |||| ||||||||| ||||||| ||||||||||||| |    
T  17606684 gggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaa--aaaagatttagattttgtccttgtaatttcagattctt 17606587  T
Q  432 ccact 436  Q
    |||||    
T  17606586 ccact 17606582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 33629068 - 33628964
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||| || |||| ||||| | ||||||||||||| |    
T  33629068 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaatttgattttgtccctgtaatttcagattctt 33628969  T
Q  432 ccact 436  Q
    |||||    
T  33628968 ccact 33628964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 333 - 436
Target Start/End: Complemental strand, 42510392 - 42510288
Alignment:
Q  333 ggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctct-aaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||| | | |||| |||||||||||||| |  || ||||||||||||||| |    
T  42510392 ggttaataccacttttggtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaaaaatttagattctacccctataatttcagattctt 42510293  T
Q  432 ccact 436  Q
    |||||    
T  42510292 ccact 42510288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 351 - 436
Target Start/End: Complemental strand, 4907321 - 4907236
Alignment:
Q  351 tccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||| ||||||||| ||||| | ||||||||||||| ||||||    
T  4907321 tccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattcttccact 4907236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 344 - 434
Target Start/End: Original strand, 18462298 - 18462387
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctcca 434  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | ||||||||||||| ||||    
T  18462298 cttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaa-aaaagatttagattttgtccctgtaatttcagattcttcca 18462387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 328 - 436
Target Start/End: Complemental strand, 39826428 - 39826320
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagat 427  Q
    |||||||| |||||  ||||| |||| |||||||||||||| || |||||||||||||| ||||  |||| ||||||||| ||||| | |||||||||||    
T  39826428 ttttgggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagat 39826329  T
Q  428 tcctccact 436  Q
    || ||||||    
T  39826328 tcttccact 39826320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 17500769 - 17500844
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagatt 407  Q
    |||||||||| | |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  17500769 gggttaataccatttttggtccctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagtttagatt 17500844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 24467982 - 24467901
Alignment:
Q  355 tgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||||||||| || ||||||||||||||||| ||||| |||| ||||||||| ||||| | ||||||||||||| ||||||    
T  24467982 tgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 24467901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 39711096 - 39711176
Alignment:
Q  355 tgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||||| |||||||| |||| ||||||    
T  39711096 tgtaatattagcgaattccggttttagtccctgtaaaa-aaaagatttagattttgtccttgtaatttcatattcttccact 39711176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 8292816 - 8292908
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||| ||||||||| | ||||||||||||||| |||||||||| ||||||||| ||||| |  ||||||| |||| ||||||    
T  8292816 cttttcgtccctgtactattagcgaatcccggttttagtccctgtaaaataaaagatttagattttgtccctgaaatttcatattcttccact 8292908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 24467641 - 24467732
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||  ||||||||||| ||||| |||| ||||||||| ||||| | ||||||||||||| ||||||    
T  24467641 cttttcgtccctgtaatattagcgaattccaattttagtccctgtaaaa-aaaagatttagattttgtccctgtaatttcagattcttccact 24467732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 429
Target Start/End: Original strand, 33628679 - 33628787
Alignment:
Q  321 ctttttattttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataat 420  Q
    ||||| |||| |||| |||||  ||||| ||||||||||||||||||| ||| ||||||||||||  ||||| |||| ||||||||| |||||   ||||    
T  33628679 cttttcatttagggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaat 33628778  T
Q  421 ttcagattc 429  Q
    |||||||||    
T  33628779 ttcagattc 33628787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 37236730 - 37236822
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| |||||  |||| |||||||| |||||  |  ||||||||||| ||||||    
T  37236730 cttttggtccctgtaatatgagcgaattccggttttagtccctataaaaagaaaagtttagattctgtccccaacatttcagattcttccact 37236822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 39711438 - 39711346
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||| ||||| |||| ||||||||| |||||   |||||||| |||| ||||||    
T  39711438 cttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattcttccact 39711346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 52058374 - 52058282
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||  ||||||||| ||| || || |||| ||||||||||||||| | ||||||||||||| ||||||    
T  52058374 cttttcgtccctgtaatattagcgaattttggttttagttcctgtagaaaaaaagatttagattatgtccctgtaatttcagattcttccact 52058282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 29696912 - 29696832
Alignment:
Q  355 tgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||||||| |||||||||||||| || ||||| |||||| ||||||| ||||| | ||||||||||||| ||||||    
T  29696912 tgtaatattagcgaattccggttttagtcactgtaaaa-aaaaaaattagattttgtccatgtaatttcagattcttccact 29696832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 48072316 - 48072235
Alignment:
Q  355 tgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||||||||| || ||||||||||||||| | ||||| |||| ||||||||||||||| | |||||||| |||| ||||||    
T  48072316 tgtaatattagtgaattccggttttagtccttgtaaaaaaaaatatttagattatgtccctgtaatttcatattcttccact 48072235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 436
Target Start/End: Original strand, 52058010 - 52058115
Alignment:
Q  331 tgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcc 430  Q
    ||||| |||||  ||||| |||| |||||||||| ||| |||||||||||||  || ||||| |||| ||||||| ||||||| | |||||||||||||     
T  52058010 tgggtaaatacctcttttcgtccttgtaatattaacgaattccggttttagtttctgtaaaaaaaaagatttagactatgtccctgtaatttcagattct 52058109  T
Q  431 tccact 436  Q
    ||||||    
T  52058110 tccact 52058115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 436
Target Start/End: Complemental strand, 34749487 - 34749379
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagat 427  Q
    |||||||| |||||  ||||| ||| ||||||||||| ||| ||||| ||||||||| | ||||| |||| ||||||||| | ||| | |||||||||||    
T  34749487 ttttgggtaaatacctctttttgtctctgtaatattatcgaattccgattttagtccttgtaaaaaaaaagatttagattttatccctgtaatttcagat 34749388  T
Q  428 tcctccact 436  Q
    || ||||||    
T  34749387 tcttccact 34749379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 39826062 - 39826154
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||| | |||||||||||| || || ||||||||||| ||||| |||| ||||||||| ||||| | ||||||||||||| ||||||    
T  39826062 cttttcgtccatataatattagcgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 39826154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 18342382 - 18342279
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccactgtcagtcc 444  Q
    |||| ||||||||||||||||||| || |||||||||||||| ||||  |||||||||| ||| | | ||| |||||||| |||| |||||| | |||||    
T  18342382 ttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaa--aaaaaatttaaattttattcttgtaatttcatattcttccacttttagtcc 18342285  T
Q  445 atcatt 450  Q
     |||||    
T  18342284 ctcatt 18342279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 21091780 - 21091857
Alignment:
Q  323 ttttattttgggttaatactacttttggtccctgtaatattagcgatttccggttttag-tccctctaaaataaaaaa 399  Q
    ||||| ||||||||||||| ||||||||||||| |||||||| ||| ||| |||||||| ||||| ||||| ||||||    
T  21091780 ttttagtttgggttaatacaacttttggtccctataatattatcgaattctggttttagttccctgtaaaaaaaaaaa 21091857  T

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Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 429
Target Start/End: Complemental strand, 26271263 - 26271166
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||||||||  ||||| ||||| |||||||||||||  | ||||||| |||||| ||||| |||| ||||||||| ||||| ||| |||| ||||||    
T  26271263 gggttaatacctcttttagtcccagtaatattagcgaaattcggttttggtccctgtaaaaaaaaacatttagattctgtccctatcatttgagattc 26271166  T

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Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 4906974 - 4907066
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||||||||||||||| || |||  |||||||||||| ||||| |||  ||||||||| ||||| | |||||||| |||| ||||||    
T  4906974 cttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattcttccact 4907066  T

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Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 27039638 - 27039741
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||| ||||||||||||| ||||| |||||||||| |||| | ||||| ||||| |||||||| ||||| || ||| | |||||| |    
T  27039638 gggttaatacctcttttcgtccctgtaatatgagcgaattccggttttggtccttgtaaaa-aaaaagtttagattttgtccctacaatataagattctt 27039736  T
Q  432 ccact 436  Q
    |||||    
T  27039737 ccact 27039741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 29696577 - 29696668
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| || ||||||||||| || ||||| |||| ||||||||| |||||   |||||||| |||| ||||||    
T  29696577 cttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaa-aaaagatttagattttgtccccgtaatttcatattcttccact 29696668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 436
Target Start/End: Complemental strand, 30299613 - 30299505
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagat 427  Q
    |||||||| |||||   |||| ||| ||||||||||||| | || |||||||||| ||| ||||| |||| ||||||||| ||||| | |||||| ||||    
T  30299613 ttttgggtaaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgtaaaaaaaaagatttagattttgtccctgtaattttagat 30299514  T
Q  428 tcctccact 436  Q
    || ||||||    
T  30299513 tcttccact 30299505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 399
Target Start/End: Original strand, 17606316 - 17606371
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaa 399  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||| ||||| ||||||    
T  17606316 cttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaa 17606371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 435
Target Start/End: Original strand, 26266427 - 26266518
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccac 435  Q
    ||||| |||||||||||||||||||  | ||||||| ||| || ||||| |||| ||||||||| ||||| ||| |||| |||||| |||||    
T  26266427 cttttagtccctgtaatattagcgaaattcggtttttgtctctgtaaaaaaaaatatttagattctgtccctatcatttgagattcttccac 26266518  T

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Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 436
Target Start/End: Complemental strand, 39971026 - 39970919
Alignment:
Q  330 ttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagatt 428  Q
    |||||| |||||  ||||| |||| |||||||||| ||| || |||||||||||||| ||||| ||||| ||||||||| ||||| | |||||| ||||     
T  39971026 ttgggtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattttagatc 39970927  T
Q  429 cctccact 436  Q
    | ||||||    
T  39970926 cttccact 39970919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 434
Target Start/End: Complemental strand, 43539713 - 43539623
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctcca 434  Q
    ||||| ||||||||||||||||| | ||||||||||||| ||| ||||| ||||||  | |||| ||||| | |||||||| |||| ||||    
T  43539713 cttttcgtccctgtaatattagcaaattccggttttagttcctgtaaaaaaaaaaaaattgattttgtccatgtaatttcaaattcttcca 43539623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 388 - 429
Target Start/End: Complemental strand, 215234 - 215193
Alignment:
Q  388 taaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  215234 taaaataaaaaatttagattttgtccttgtaatttcagattc 215193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 8293174 - 8293081
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||||| |||||||| ||| |||  |||||||||||| ||||| ||||| ||||||||| ||||| | |||||||| |||| ||||||    
T  8293174 cttttcgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 8293081  T

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Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 436
Target Start/End: Complemental strand, 18462643 - 18462558
Alignment:
Q  351 tccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||||||||| | ||||||||||||| | | || || |||| ||||||||| |||||   ||||||||||||| ||||||    
T  18462643 tccctgtaatattagcaaattccggttttagttcttgtataaaaaaagatttagattttgtccccgtaatttcagattcttccact 18462558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 436
Target Start/End: Original strand, 34749157 - 34749241
Alignment:
Q  351 tccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||||||||||| ||| | ||||||||||| ||||| |||| ||||||||| |||||   |||||||| |||| ||||||    
T  34749157 tccctgtaatattagcgaattctgattttagtccctataaaa-aaaagatttagattttgtccccgtaatttcatattcttccact 34749241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 20996045 - 20995942
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||| ||||||||||||||||||| ||   |||||||||| | ||||| |||| ||||||||| ||||  | |||||||| |||| |    
T  20996045 gggttaatacctctttttgtccctgtaatattagcgaattttagttttagtccatgtaaaa-aaaagatttagattttgtctctgtaatttcatattctt 20995947  T
Q  432 ccact 436  Q
    |||||    
T  20995946 ccact 20995942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 30252258 - 30252174
Alignment:
Q  350 gtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctcca 434  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||  ||| ||||||||| |||||   |||||||| |||| ||||    
T  30252258 gtccctataatattagcgaattctggttttagtccctgtaaaaataaagatttagattttgtccccgtaatttcatattcttcca 30252174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 30299244 - 30299335
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||||||||||||||||||  | || ||||||| ||| ||||| |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  30299244 cttttcgtccctgtaatattagcgaacttcgattttagt-cctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 30299335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 436
Target Start/End: Original strand, 7473782 - 7473896
Alignment:
Q  323 ttttattttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctct-aaaataaaaaatttagattatgtccttataatt 421  Q
    |||| |||| ||||||||||  ||||||||||| |||||||||| |  ||| ||||||| |||| | |||| ||||||  |||||||||||  | |||||    
T  7473782 tttttttttaggttaatactgtttttggtccctataatattagcaaactccagttttagcccctgtaaaaaaaaaaaaaatagattatgtctctgtaatt 7473881  T
Q  422 tcagattcctccact 436  Q
    ||| |||| ||||||    
T  7473882 tcatattcttccact 7473896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 413
Target Start/End: Original strand, 16294044 - 16294129
Alignment:
Q  327 attttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtcc 413  Q
    |||| ||||||||||   |||||||||||||||||||||||| || || ||||||| | | ||||| ||| |||||||||| |||||    
T  16294044 atttagggttaataccgattttggtccctgtaatattagcgaatttcgattttagttcttgtaaaa-aaataatttagattttgtcc 16294129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 424
Target Start/End: Original strand, 48071984 - 48072053
Alignment:
Q  355 tgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttca 424  Q
    |||||||||||||| ||| ||||||||| ||| ||| | |||| ||||||||| ||||| | ||||||||    
T  48071984 tgtaatattagcgaattctggttttagttcctgtaataaaaaagatttagattttgtccctgtaatttca 48072053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 386
Target Start/End: Original strand, 20995720 - 20995752
Alignment:
Q  354 ctgtaatattagcgatttccggttttagtccct 386  Q
    ||||||||||||||| |||||||||||||||||    
T  20995720 ctgtaatattagcgaattccggttttagtccct 20995752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 21144867 - 21144781
Alignment:
Q  348 tggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctcca 434  Q
    ||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  21144867 tggtccctgtaatattaacgaattccgattttagtccctataaaataaaaaatttagattttgtccttgtaatttcagattcctcca 21144781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 21147936 - 21148041
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcc 430  Q
    ||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||| ||||| | |||||||||||||     
T  21147936 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 21148035  T
Q  431 tccact 436  Q
    ||||||    
T  21148036 tccact 21148041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 14820672 - 14820568
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | |||||||| |||| |    
T  14820672 gggttaatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 14820573  T
Q  432 ccact 436  Q
    |||||    
T  14820572 ccact 14820568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 38726687 - 38726791
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||   |||||||||||||||||| ||| | ||||||||||||||||| ||||| ||||| |||||||| ||||||| ||||||||||||| |    
T  38726687 gggttaataccctttttggtccctgtaatatgagcaaattccggttttagtccctataaaaaaaaaagtttagattttgtccttgtaatttcagattctt 38726786  T
Q  432 ccact 436  Q
    |||||    
T  38726787 ccact 38726791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 434
Target Start/End: Original strand, 26136697 - 26136787
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctcca 434  Q
    ||||| || |||||||||||||||| |||| |||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||| ||||    
T  26136697 cttttcgttcctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaaatttagattttgtccttgtaatttcagattcttcca 26136787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 5554881 - 5554973
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||| ||| ||||| ||||| |||||||||| |||| ||||||    
T  5554881 cttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcatattcttccact 5554973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 10108382 - 10108474
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  10108382 cttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 10108474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 10108748 - 10108644
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||| ||||||||||||||||| | ||||||||||||||||| ||||| |||| ||||||||| ||||| | |||||||| |||| |    
T  10108748 gggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108649  T
Q  432 ccact 436  Q
    |||||    
T  10108648 ccact 10108644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 332 - 428
Target Start/End: Original strand, 40486629 - 40486724
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagatt 428  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||  |||| ||||| |||||||| ||||||| |||||| |||||    
T  40486629 gggttaatactacttttggtccctgtaatattaacgaattccgattttagtccctgcaaaa-aaaaagtttagattctgtccttgtaattttagatt 40486724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 344 - 462
Target Start/End: Complemental strand, 21148302 - 21148184
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccactgtcagtc 443  Q
    ||||| ||| |||||||||||| || ||||||||||||||||| ||||| |||||| ||||||| ||||||| |||||||| |||| |||||| | ||||    
T  21148302 cttttcgtctctgtaatattagtgaattccggttttagtccctgtaaaaaaaaaaaattagattttgtccttgtaatttcatattcttccacttttagtc 21148203  T
Q  444 catcatttaagcatgtcag 462  Q
    | || ||| | ||||||||    
T  21148202 cctcctttcatcatgtcag 21148184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 436
Target Start/End: Original strand, 43851664 - 43851768
Alignment:
Q  331 tgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcc 430  Q
    ||||| |||||  ||||| ||||||||||||||||||| ||||||||||||||||| | ||| |||| ||||||||| ||||| | |||||||||||||     
T  43851664 tgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaacaaaagatttagattttgtccctgtaatttcagattct 43851762  T
Q  431 tccact 436  Q
    ||||||    
T  43851763 tccact 43851768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 30789520 - 30789611
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||| ||||| |||| ||||||||| ||||  | ||||||||||||||||||||    
T  30789520 cttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaa-aaaagatttagattttgtctctgtaatttcagattcctccact 30789611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 330 - 436
Target Start/End: Original strand, 14820293 - 14820398
Alignment:
Q  330 ttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    |||||| |||||  ||||| ||||||||||||||||||| ||||||||||||| ||| ||||| |||| ||||||||| ||||| | |||||||| ||||    
T  14820293 ttgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaa-aaaagatttagattttgtccctgtaatttcatattc 14820391  T
Q  430 ctccact 436  Q
     ||||||    
T  14820392 ttccact 14820398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 344 - 429
Target Start/End: Complemental strand, 10171509 - 10171424
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||  ||||||||| ||||| | |||||| ||||||    
T  10171509 cttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagattc 10171424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 453
Target Start/End: Complemental strand, 39889740 - 39889619
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||   ||||||| |||||||||| || |||||||| ||||||||||  ||||  |||||||||||||||||||| ||  ||||||||||| |    
T  39889740 gggttaataccctttttggttcctgtaatatgagggatttccgattttagtcccagtaaataaaaaaatttagattatgtccctaccatttcagattctt 39889641  T
Q  432 ccactgtcagtccatcatttaa 453  Q
    ||||| |  |||||||| ||||    
T  39889640 ccacttttggtccatcacttaa 39889619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 344 - 429
Target Start/End: Original strand, 42112997 - 42113081
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||| ||||| |||| ||||||||||||||| | |||||| ||||||    
T  42112997 cttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaa-aaaagatttagattatgtccctgtaatttaagattc 42113081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 5555235 - 5555143
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| || ||||||||||| || ||||| |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  5555235 cttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 5555143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 7689889 - 7689797
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||| ||||||||| | ||||| |||| ||||| ||| ||||| | ||||||||||||| ||||||    
T  7689889 cttttcgtccctgtaatattagcgaattccgattttagtccgtgtaaaaaaaaagatttaaattttgtccctgtaatttcagattcttccact 7689797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 30789873 - 30789781
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||  | ||||||||||||||||| ||||  |||| ||||||||| ||||| | ||||||||||||| ||||||    
T  30789873 cttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccact 30789781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 20877123 - 20876995
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||| ||||  ||||| ||| |||| | ||| ||| ||||||||||| |    
T  20877123 gggttaatacctcttttggtccctgtaatatgagcgaattccggttttagtccctataaa--aaaaagttttgattctatccctatcatttcagattctt 20877026  T
Q  432 ccactgtcagtccatcatttaagcatgtcag 462  Q
    || || | ||||| ||| |||| | ||||||    
T  20877025 ccccttttagtccctcacttaaacttgtcag 20876995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 429
Target Start/End: Original strand, 35367405 - 35367508
Alignment:
Q  327 attttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaa-aaatttagattatgtccttataatttcag 425  Q
    |||| |||| |||||  ||||||||||||| ||||||||||| ||||||||||| ||||| ||||| ||| ||| ||||||| ||||| | |||||||||    
T  35367405 atttagggtaaatacctcttttggtccctgcaatattagcgaattccggttttaatccctgtaaaaaaaataaaattagattttgtccctgtaatttcag 35367504  T
Q  426 attc 429  Q
    ||||    
T  35367505 attc 35367508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 453
Target Start/End: Original strand, 20875698 - 20875817
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||||||||||||||||| ||| | || |||||||||||| | ||||  ||||| ||| |||||||||| ||| ||||||||||| |    
T  20875698 gggttaatacctcttttggtccctgtaatatgagcaaatttcggttttagtccttgtaaa--aaaaagtttggattatgtccctattatttcagattctt 20875795  T
Q  432 ccactgtcagtccatcatttaa 453  Q
    ||||| | ||||| ||| ||||    
T  20875796 ccacttttagtccctcacttaa 20875817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 397
Target Start/End: Complemental strand, 40487797 - 40487727
Alignment:
Q  327 attttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaa 397  Q
    |||| |||||||||| ||||||||||| |||||||||||||| |||| |||||||||||| ||||| ||||    
T  40487797 atttagggttaataccacttttggtccttgtaatattagcgaattccagttttagtccctgtaaaaaaaaa 40487727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 436
Target Start/End: Original strand, 7689519 - 7689627
Alignment:
Q  327 attttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcaga 426  Q
    |||| |||| |||||  ||||| ||||||||||||||||||| || ||| |||||||| | ||||  |||| ||||||||| ||||||| ||||||||||    
T  7689519 atttagggtaaatacctcttttcgtccctgtaatattagcgaatttcggctttagtccttgtaaataaaaagatttagatt-tgtccttgtaatttcaga 7689617  T
Q  427 ttcctccact 436  Q
    ||| ||||||    
T  7689618 ttcttccact 7689627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 409
Target Start/End: Complemental strand, 22848624 - 22848547
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattat 409  Q
    ||||||||||| || | |||| | ||||||||||||| ||||| ||||||||| | ||||||||||||||||||||||    
T  22848624 gggttaatactgctctgggtcaccgtaatattagcgaattccgattttagtccttgtaaaataaaaaatttagattat 22848547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 413
Target Start/End: Original strand, 21144575 - 21144655
Alignment:
Q  333 ggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtcc 413  Q
    |||||||||| |||||||| || |||||||||| || ||||||||||||||||| ||| | ||||||| |||||| |||||    
T  21144575 ggttaatactgcttttggtacccgtaatattagagaattccggttttagtccctgtaacaaaaaaaatatagattttgtcc 21144655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 8106130 - 8106028
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  |||||||||  || ||||| ||||| |||| |||||||||||||||||  ||||  ||||||||  |||| ||| |||||||||||||    
T  8106130 gggttaatacctcttttggtcattgcaatatgagcgaattccagttttagtccctctaaa--aaaatgtttagatttcgtccctatcatttcagattcct 8106033  T
Q  432 ccact 436  Q
    |||||    
T  8106032 ccact 8106028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 436
Target Start/End: Complemental strand, 17623245 - 17623161
Alignment:
Q  351 tccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||||||||| | ||| ||||||||| ||| ||||| |||| ||||||||| ||||||| |||||||| |||| ||||||    
T  17623245 tccctgtaatattagccaattctggttttagtgcctgtaaaa-aaaagatttagattttgtccttgtaatttcaaattcttccact 17623161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 429
Target Start/End: Complemental strand, 18044208 - 18044110
Alignment:
Q  329 tttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagatt 428  Q
    ||||||| |||||  ||||| ||||||||||||||||||| ||||||||||||||| | ||||  |||| | ||| ||| ||||| | ||||||||||||    
T  18044208 tttgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccatgtaaa--aaaataattatattttgtccctgtaatttcagatt 18044111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 429
Target Start/End: Original strand, 39888477 - 39888578
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagat 427  Q
    |||| |||||||||  |||||||||||| |||||| |||||  | |||||||||||||| |||||  || |||||||||| ||||| ||| |||| ||||    
T  39888477 tttttggttaatacctcttttggtccctataatataagcgaaattcggttttagtccctgtaaaaataataatttagattctgtccctatcatttgagat 39888576  T
Q  428 tc 429  Q
    ||    
T  39888577 tc 39888578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 43481681 - 43481588
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||| ||||||||||||||| |||||||||||||| || ||||| ||||| ||||| ||| ||||| | |||||||| |||| ||||||    
T  43481681 cttttcgtcactgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaattttgtccctgtaatttcaaattcttccact 43481588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 26137062 - 26136959
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||| ||||| |||||| |||||||||||||||| || || | ||||||||||||   ||| |||||| ||||||| ||||| | ||||||||||||| |    
T  26137062 gggtaaataccacttttcgtccctgtaatattagtgaatttcagttttagtccctagtaaa-aaaaaaattagattttgtccctgtaatttcagattctt 26136964  T
Q  432 ccact 436  Q
    |||||    
T  26136963 ccact 26136959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 42606119 - 42606027
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||| ||||||||||  | ||||| |||| ||||||||| |||||   |||||||| |||| ||||||    
T  42606119 ctttttgtccctgtaatattagcgaattctggttttagtcaatgtaaaaaaaaagatttagattttgtccccgtaatttcaaattcttccact 42606027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 1949652 - 1949726
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagatt 407  Q
    ||||||||||  ||||||||||||||||||| | ||| ||||||||||||| ||| ||||| ||||| ||||||||    
T  1949652 gggttaatacctcttttggtccctgtaatatgatcgaattccggttttagtgcctgtaaaa-aaaaagtttagatt 1949726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 428
Target Start/End: Original strand, 14767501 - 14767603
Alignment:
Q  327 attttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcag 425  Q
    |||| ||||||||||  |||||  || ||||||||||||||| ||  ||||||||||||  ||||| ||||| ||||||||| ||||| | |||||||||    
T  14767501 atttagggttaatacctcttttcatctctgtaatattagcgaattttggttttagtcccaataaaaaaaaaagatttagattttgtccctgtaatttcag 14767600  T
Q  426 att 428  Q
    |||    
T  14767601 att 14767603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 38728112 - 38727983
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||||||||||| |||| |||||| | |||| ||| | || | |||||| || || ||||| |||||||| ||||||||||||| ||||||||||| | |    
T  38728112 gggttaatactattttttgtcccttttatatgagcaaatttcagttttaatctctgtaaaaaaaaaaatt-agattatgtccttgtaatttcagatgctt 38728014  T
Q  432 ccactgtcagtccatcatttaagcatgtcag 462  Q
    ||||| | ||||| ||| |||| | ||||||    
T  38728013 ccactttgagtccctcacttaaacttgtcag 38727983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 42113347 - 42113258
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||| ||| || |||||||||| ||| |||   |||||| ||||||||||||| | |||||||| |||| ||||||    
T  42113347 cttttcgtccctgtaatattaacgaatttcggttttagttcctgtaa---aaaaaaattagattatgtccctttaatttcaaattcttccact 42113258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 436
Target Start/End: Complemental strand, 2583675 - 2583594
Alignment:
Q  356 gtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcctccact 436  Q
    ||||||||||||| |||  ||||||| |||| ||||| ||||| ||||| ||| ||||| ||||||||||||||| ||||||    
T  2583675 gtaatattagcgaattctagttttaggccctgtaaaaaaaaaagatttaaattttgtccctataatttcagattcttccact 2583594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 429
Target Start/End: Original strand, 2583341 - 2583417
Alignment:
Q  353 cctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    |||||||||||||||| || || ||||||| | | |||||||||| ||||||||| ||||| | ||||||| |||||    
T  2583341 cctgtaatattagcgaatttcgattttagttcttgtaaaataaaagatttagattttgtccctgtaatttcggattc 2583417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 424
Target Start/End: Original strand, 26532807 - 26532875
Alignment:
Q  357 taatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttca 424  Q
    |||||||||||| ||||||||||||||| | ||||| ||||| ||||||||| ||||| | ||||||||    
T  26532807 taatattagcgaattccggttttagtccatgtaaaaaaaaaagatttagattttgtccctgtaatttca 26532875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 424
Target Start/End: Original strand, 28977619 - 28977711
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttca 424  Q
    ||||||||||  ||||||||||||||||||| ||  |||| |  ||||||||||| ||||  | |||||||||||| ||||| ||| ||||||    
T  28977619 gggttaataccccttttggtccctgtaatatgagaaattttcaattttagtccctgtaaataagaaaatttagattctgtccctatcatttca 28977711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 327 - 436
Target Start/End: Complemental strand, 14162253 - 14162145
Alignment:
Q  327 attttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcaga 426  Q
    |||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||| ||||| || | ||||||||| ||||||| ||||||||||    
T  14162253 attttgggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaa-aagagatttagattttgtccttgtaatttcaga 14162155  T
Q  427 ttcctccact 436  Q
    ||| ||||||    
T  14162154 ttcttccact 14162145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 36991037 - 36990934
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| ||||| |||||||| ||||| | |||||| |||||| |    
T  36991037 gggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaa-aaaaagtttagattctgtccctgtaattttagattctt 36990939  T
Q  432 ccact 436  Q
    |||||    
T  36990938 ccact 36990934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 37016477 - 37016374
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| ||||| |||||||| ||||| | |||||| |||||| |    
T  37016477 gggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaa-aaaaagtttagattctgtccctgtaattttagattctt 37016379  T
Q  432 ccact 436  Q
    |||||    
T  37016378 ccact 37016374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 436
Target Start/End: Original strand, 35740813 - 35740919
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagat 427  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||  ||||| |||||||| ||||| | |||||| | ||    
T  35740813 ttttgggttaatactacttttggtccctgtaatattagcgaattccggttttagtccccgtaaa--aaaaagtttagattttgtccctgtaattttaaat 35740910  T
Q  428 tcctccact 436  Q
    || ||||||    
T  35740911 tcttccact 35740919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 16722003 - 16722095
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||| ||||| | ||||||||||||| ||||||    
T  16722003 cttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagattcttccact 16722095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 32998510 - 32998382
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||||||||| | |||||||||||||||||||||||| ||| ||| ||||| ||| |||||  |||| |||||||| ||||| | |||||||||||||||    
T  32998510 gggttaataccatttttggtccctgtaatattagcgaattctggtgttagttcctgtaaaa--aaaagtttagattctgtccctgtaatttcagattcct 32998413  T
Q  432 ccactgtcagtccatcatttaagcatgtcag 462  Q
    ||||| | ||||| || ||||| ||||||||    
T  32998412 ccacttttagtccctcgtttaaccatgtcag 32998382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 330 - 436
Target Start/End: Complemental strand, 5800984 - 5800879
Alignment:
Q  330 ttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||||||||||  ||||| ||||||||||||||||||| |||||| |||||||||| ||||| |||| ||||||||| ||||||| |||||||| ||||    
T  5800984 ttgggttaatacctcttttcgtccctgtaatattagcgaattccgg-tttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattc 5800886  T
Q  430 ctccact 436  Q
     ||||||    
T  5800885 ttccact 5800879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 413
Target Start/End: Complemental strand, 35741962 - 35741882
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtcc 413  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||| ||||||||||||||    
T  35741962 gggttaataccacttttggtccctgtaatattagcgaattccagttttagtccctgtaaaa-aaaaagtttagattatgtcc 35741882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 9266987 - 9267079
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  9266987 cttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 9267079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 14262048 - 14262140
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||||||||||||| | ||||| |||| ||||||||| ||||| | ||||||||||||| ||||||    
T  14262048 cttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagattcttccact 14262140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 322 - 436
Target Start/End: Complemental strand, 14171974 - 14171860
Alignment:
Q  322 tttttattttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatt 421  Q
    ||||| ||| |||| |||||  ||||| ||||||||||||||||||| ||||||||||||||||| ||||  |||| ||||||||| ||||| | |||||    
T  14171974 tttttttttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatt 14171875  T
Q  422 tcagattcctccact 436  Q
    || ||||| ||||||    
T  14171874 tctgattcttccact 14171860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 3424774 - 3424879
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaa-tttagattatgtccttataatttcagattcc 430  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| ||||||||   ||| ||| |||| ||||||     
T  3424774 gggttaatacctcttttggtccctgtaatattagcgatttccggttttggtccctgtaaaaaaaaaaagtttagatttcatccctatcatttgagattct 3424873  T
Q  431 tccact 436  Q
    ||||||    
T  3424874 tccact 3424879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 429
Target Start/End: Original strand, 19720345 - 19720430
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | |||||||| ||||    
T  19720345 cttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 19720430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 436
Target Start/End: Original strand, 43572384 - 43572493
Alignment:
Q  327 attttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcaga 426  Q
    |||| |||| |||||  ||||| || |||||||||||||||| || |||||||||||||| |||||  ||||||||||||| ||||| | ||||||||||    
T  43572384 atttagggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcaga 43572483  T
Q  427 ttcctccact 436  Q
    ||| ||||||    
T  43572484 ttcttccact 43572493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 429
Target Start/End: Original strand, 45969927 - 45970012
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| |||||||||||||||| || ||||||||||||||||| ||||| |||| ||||||||| ||||| | |||||||||||||    
T  45969927 cttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattc 45970012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 14161883 - 14161975
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| |||| |||||||| ||| ||||| |||| ||||||||||||||| | |||||||| |||| ||||||    
T  14161883 cttttcgtccctgtaatattagcgaattccagttttagttcctataaaaaaaaagatttagattatgtccctgtaatttcatattcttccact 14161975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 344 - 424
Target Start/End: Complemental strand, 14262402 - 14262322
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttca 424  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | ||||||||    
T  14262402 cttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttca 14262322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 45003508 - 45003600
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||| ||||||||||| | ||||||||| ||||||| |||||||||| ||||||||| ||||| | ||||||||||||| ||||||    
T  45003508 cttttcgtccccgtaatattagcaaattccggtttcagtccctataaaataaaagatttagattttgtccctgtaatttcagattcttccact 45003600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 21633256 - 21633170
Alignment:
Q  350 gtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||||||||||||||||| || | |||||||||||| ||||| |||| ||||||||| ||||| | ||||||||||||| ||||||    
T  21633256 gtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 21633170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 30500043 - 30500145
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  |||||  |||||||||||||||||| || |||||||||||||| ||||  |||||||||||||| ||||| | |||||||| |||| |    
T  30500043 gggttaatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaa--aaaaaatttagattttgtccctgtaatttcatattctt 30500140  T
Q  432 ccact 436  Q
    |||||    
T  30500141 ccact 30500145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 3426026 - 3425923
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||||| ||||||||||||||||| ||||||||||||||||  ||||| |||||| |||||||   ||||||| |||| |||||| |    
T  3426026 gggttaatacctcttttggcccctgtaatattagcgaattccggttttagtcccaataaaa-aaaaaaattagattccatccttatcatttgagattctt 3425928  T
Q  432 ccact 436  Q
    |||||    
T  3425927 ccact 3425923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 11003744 - 11003836
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||| |||||||||| ||| ||||||||||||||||| ||||  |||| | ||||||| ||||||| ||||||||||||| ||||||    
T  11003744 ctttttgtccttgtaatattaccgaattccggttttagtccctgtaaataaaaagacttagattttgtccttgtaatttcagattcttccact 11003836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 424
Target Start/End: Complemental strand, 30500406 - 30500327
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttca 424  Q
    ||||| ||||||||||||||||||| |||| |||||||||||| ||||| |||||||||||||| ||||| | ||||||||    
T  30500406 cttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaa-aaaaaatttagattttgtccctgtaatttca 30500327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 49986521 - 49986625
Alignment:
Q  326 tattttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttca 424  Q
    ||||| |||| |||||  ||||| |||||||||||||||| || |||||||||||||| || ||||| ||||| ||||||||| ||||| | ||||||||    
T  49986521 tatttagggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttca 49986620  T
Q  425 gattc 429  Q
    |||||    
T  49986621 gattc 49986625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 331 - 434
Target Start/End: Original strand, 5800604 - 5800707
Alignment:
Q  331 tgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcc 430  Q
    ||||| |||||  ||||| ||||||||||||||| ||| || |||||||||||||| ||||| |||  ||||||||||||||| | |||||||| ||||     
T  5800604 tgggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattct 5800703  T
Q  431 tcca 434  Q
    ||||    
T  5800704 tcca 5800707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 436
Target Start/End: Complemental strand, 16722379 - 16722265
Alignment:
Q  322 tttttattttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatt 421  Q
    ||||| ||| |||| |||||  ||||| ||||||||||||||||||| || | |||||||||||| || || |||| ||||||||| ||||| | |||||    
T  16722379 tttttttttagggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatt 16722280  T
Q  422 tcagattcctccact 436  Q
    ||| |||| ||||||    
T  16722279 tcatattcttccact 16722265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 19112776 - 19112869
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||| |||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||| ||||| |  ||||||| |||| ||||||    
T  19112776 cttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattcttccact 19112869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 429
Target Start/End: Complemental strand, 19113131 - 19113046
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| |||||| |||||||| ||| ||||||||||||||||| ||||| |||| ||||||||| | ||| | |||||||||||||    
T  19113131 cttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattc 19113046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 20853707 - 20853800
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| || ||||||||  |||| ||||| ||||| ||||||||| ||||| |||||||||| |||| ||||||    
T  20853707 cttttcgtccctgtaatattagcgaatttcggttttaaaccctgtaaaaaaaaaagatttagattttgtccctataatttcatattcttccact 20853800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 424
Target Start/End: Original strand, 38283569 - 38283642
Alignment:
Q  351 tccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttca 424  Q
    |||||||||||||| ||| ||||||||||||||| | ||||| |||||||||||||| ||| | ||||||||||    
T  38283569 tccctgtaatattaacgaattccggttttagtccttgtaaaaaaaaaaatttagattttgttcctataatttca 38283642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 45970282 - 45970189
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||||||||||||||| || || |||||||||||||| ||||| ||||| ||||| ||| ||||| | ||||||||||||| ||||||    
T  45970282 cttttcgtccctgtaatattagtgaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagattcttccact 45970189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 20854061 - 20853970
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||| |||||||||||||| || |||||||||||| | ||||| |||| ||||||||| ||||| | ||||||||||||| ||||||    
T  20854061 cttttcgtccatgtaatattagcgaatttcggttttagtcc-tgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 20853970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 428
Target Start/End: Original strand, 33372418 - 33372502
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagatt 428  Q
    ||||| ||||||||||||||||||| ||| ||||||||| ||| ||||  |||| ||||||||| ||||| | ||||||||||||    
T  33372418 cttttcgtccctgtaatattagcgaattctggttttagttcctgtaaataaaaagatttagattttgtccctgtaatttcagatt 33372502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 45003855 - 45003770
Alignment:
Q  350 gtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||||||||||||||||| || |||||||||| ||| ||||| |||| |||||||||  |||| |||||||||| |||| ||||||    
T  45003855 gtccctgtaatattagcgaatttcggttttagttcctgtaaaa-aaaagatttagatttagtccctataatttcatattcttccact 45003770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 436
Target Start/End: Complemental strand, 43572749 - 43572665
Alignment:
Q  351 tccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||||||  | | ||||||||||||| ||| ||||| |||||||||||||| ||||| | ||||||||||||| ||||||    
T  43572749 tccctgtaatattgacaaattccggttttagttcctgtaaaa-aaaaaatttagattctgtccctgtaatttcagattcttccact 43572665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 4204721 - 4204812
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||||||||||||||  || || | |||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||| ||||||    
T  4204721 cttttcgtccctgtaatattaatgaatttcagttttagttcctgtaaaa-aaaagatttagattatgtccctgtaatttcagattcttccact 4204812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 14171587 - 14171690
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||| ||||| |||||| ||||||||||||||||||| ||||| ||||| |  || ||||| |||| ||||||||| ||||| | |||||||| |||| |    
T  14171587 gggtaaataccacttttcgtccctgtaatattagcgaattccgattttaatttctgtaaaa-aaaagatttagattttgtccctgtaatttcaaattctt 14171685  T
Q  432 ccact 436  Q
    |||||    
T  14171686 ccact 14171690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 27946112 - 27946183
Alignment:
Q  335 ttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagatt 407  Q
    |||||||  ||||| ||||||||||||||||||| || |||||||||||||| ||||| |||| |||||||||    
T  27946112 ttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaa-aaaagatttagatt 27946183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 33372770 - 33372678
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||| ||||||||||||| || || ||||||| ||| | ||| |||| ||||||||| ||||| | ||||||||||||| ||||||    
T  33372770 cttttcgtccccgtaatattagcgaatttcgattttagttcctgttaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 33372678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 52553054 - 52552962
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||| |||||||||||||| |||  |||||||||||| ||||| |||| ||||||||| ||||  | |||||||| |||| ||||||    
T  52553054 cttttcgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattcttccact 52552962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 428
Target Start/End: Complemental strand, 15328844 - 15328742
Alignment:
Q  327 attttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcag 425  Q
    |||| ||||||||||  |||||  || ||||||||||||||| ||  ||||||||||||  ||||| ||||| ||||||||| ||||| | |||||||||    
T  15328844 atttagggttaatacctcttttcatctctgtaatattagcgaattttggttttagtcccaataaaaaaaaaagatttagattttgtccctgtaatttcag 15328745  T
Q  426 att 428  Q
    |||    
T  15328744 att 15328742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 436
Target Start/End: Original strand, 35995668 - 35995782
Alignment:
Q  322 tttttattttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatt 421  Q
    ||||| ||| |||| |||||  ||||| || |||||||||||||||| ||||||||||||||||| || |||      |||||||| ||||| | |||||    
T  35995668 tttttttttagggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatt 35995767  T
Q  422 tcagattcctccact 436  Q
    |||||||| ||||||    
T  35995768 tcagattcttccact 35995782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 35996041 - 35995988
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaa 397  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||| ||||| ||||    
T  35996041 cttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaa 35995988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 49986894 - 49986802
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaa-aaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||| ||||||||||||| || |||||||||| ||| ||||| ||| ||||||||||| ||| ||| |||||||| |||| ||||||    
T  49986894 cttttcgtcccagtaatattagcgaatttcggttttagttcctgtaaaaaaaagaaatttagattttgt-cttgtaatttcatattcttccact 49986802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 428
Target Start/End: Complemental strand, 17649367 - 17649292
Alignment:
Q  352 ccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagatt 428  Q
    |||||||||| |||||| ||||||||||||| |||  |||| |||| ||||||||| ||||| | ||||||||||||    
T  17649367 ccctgtaatactagcgaattccggttttagttcctggaaaa-aaaagatttagattttgtccctgtaatttcagatt 17649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 392
Target Start/End: Complemental strand, 27946231 - 27946183
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaa 392  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||| |||||    
T  27946231 cttttcgtcccagtaatattagcgaattccggttttagtccctgtaaaa 27946183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 32997207 - 32997310
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||||||||  | ||||||| ||||||||||||  || ||||||||||||||||| ||||| ||||| ||||||||   ||| ||| |||| |||||| |    
T  32997207 gggttaatatcatttttggttcctgtaatattatggaattccggttttagtccctgtaaaa-aaaaagtttagattccatccatatcatttaagattctt 32997305  T
Q  432 ccact 436  Q
    |||||    
T  32997306 ccact 32997310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 436
Target Start/End: Complemental strand, 38283867 - 38283824
Alignment:
Q  393 taaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||    
T  38283867 taaaaaatttagattttgtccctataatttcagattcttccact 38283824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 403
Target Start/End: Complemental strand, 24490278 - 24490226
Alignment:
Q  351 tccctgtaatattagcgatttccggttttagtccctctaaaataaaaaattta 403  Q
    ||||||||||||||| || |||||||||||||||||  |||| |||| |||||    
T  24490278 tccctgtaatattagtgaattccggttttagtccctgcaaaaaaaaagattta 24490226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 364
Target Start/End: Original strand, 36989830 - 36989862
Alignment:
Q  332 gggttaatactacttttggtccctgtaatatta 364  Q
    |||||||||| ||||||||||||||||||||||    
T  36989830 gggttaataccacttttggtccctgtaatatta 36989862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 364
Target Start/End: Original strand, 37015270 - 37015302
Alignment:
Q  332 gggttaatactacttttggtccctgtaatatta 364  Q
    |||||||||| ||||||||||||||||||||||    
T  37015270 gggttaataccacttttggtccctgtaatatta 37015302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 344 - 438
Target Start/End: Original strand, 3881 - 3975
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccactgt 438  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||||| | |||||||| |||| ||||||||    
T  3881 cttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtccctgtaatttcaaattcttccactgt 3975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 9e-25; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 36889056 - 36888928
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||||||||| ||||||||||||| |||||||||||| ||  ||||||||||| | ||||| |||||||||||||||||||| | |||||||||||||||    
T  36889056 gggttaataccacttttggtccctataatattagcgaattttggttttagtcc-tgtaaaa-aaaaaatttagattatgtccctgtaatttcagattcct 36888959  T
Q  432 ccactgtcagtccatcatttaagcatgtcag 462  Q
    ||||| | ||||| || ||||| | ||||||    
T  36888958 ccacttttagtccctcgtttaaccttgtcag 36888928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 330 - 462
Target Start/End: Original strand, 43312207 - 43312339
Alignment:
Q  330 ttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    |||| ||||||  |||| ||||||||||||||||||| | ||||| ||||||||||| ||||| |||||||||| ||| ||||| | |||||||||||||    
T  43312207 ttggattaatatcacttctggtccctgtaatattagcaaattccgattttagtccctgtaaaaaaaaaaatttaaattctgtccctgtaatttcagattc 43312306  T
Q  430 ctccactgtcagtccatcatttaagcatgtcag 462  Q
    ||||||| | ||||| || ||||| | ||||||    
T  43312307 ctccacttttagtccctcgtttaatcctgtcag 43312339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 9397076 - 9396973
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||| |||||| ||||| ||||||||||||||||| | ||||||||||||||||| ||||| |||| ||||||||| ||||| | ||||||||||||| |    
T  9397076 gggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaa-aaaagatttagattttgtccctgtaatttcagattctt 9396978  T
Q  432 ccact 436  Q
    |||||    
T  9396977 ccact 9396973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 9516622 - 9516714
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||||||||||||| | ||||| |||| ||||||||| ||||||| |||||||| |||| ||||||    
T  9516622 cttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccact 9516714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 12904759 - 12904850
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||||| |||||||||||| ||  ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  12904759 cttttcgtccctataatattagcgaattttggttttagtccctgtaaaa-aaaaaatttagattttgtccttataatttcagattcttccact 12904850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 12520637 - 12520743
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctct--aaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| |||| |||||| |||||| |||||||||||| |||| |||||||||||| |  |||| ||||| |||||||| ||||| |||||||||||||||    
T  12520637 gggttcataccacttttagtccctataatattagcgaattccagttttagtccctattaaaaaaaaaaagtttagattttgtccctataatttcagattc 12520736  T
Q  430 ctccact 436  Q
    |||||||    
T  12520737 ctccact 12520743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 436
Target Start/End: Complemental strand, 46046789 - 46046698
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||  |||| ||||||||| ||||| | ||||||||||||| ||||||    
T  46046789 ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccact 46046698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 433
Target Start/End: Original strand, 48259835 - 48259924
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctcc 433  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||| ||||  |||| ||||||||| ||||| | |||||||||||||||||    
T  48259835 cttttcgtccctgtaatattagcgaattccggttttaatccctgtaaataaaaagatttagattttgtccatgtaatttcagattcctcc 48259924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 9619345 - 9619253
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||| || || |||| ||||||||| ||||||| |||||||| |||| ||||||    
T  9619345 ctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcatattcttccact 9619253  T

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Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 436
Target Start/End: Original strand, 9618993 - 9619084
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||| |||| |||||||||||||| ||||||||||||||||| |||||  ||| ||||||||| ||||| | ||||||||||||| ||||||    
T  9618993 ttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttccact 9619084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 43313593 - 43313515
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagatt 407  Q
    |||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||||| ||||| ||||| ||||||||    
T  43313593 ttttgggttaataccacttttggtctctgtaatattagcgaattctggttttagtccctgtaaaa-aaaaagtttagatt 43313515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 3018023 - 3018116
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||||||||||||||  ||||| ||||| ||||||||| ||||| | |||||||| |||| ||||||    
T  3018023 cttttcgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 3018116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 344 - 429
Target Start/End: Complemental strand, 9516976 - 9516891
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| ||||||||||||||||||| || ||||||||||| || ||||| |||| ||||||||| ||||| | |||||||||||||    
T  9516976 cttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagattc 9516891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 429
Target Start/End: Original strand, 15640712 - 15640812
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagat 427  Q
    ||||||||||| ||  ||||| ||||||||||||||||||| ||||||||||||| ||| ||||| |||| ||||||||| ||||| | |||||||| ||    
T  15640712 ttttgggttaacacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaa-aaaagatttagattttgtccctgtaatttcatat 15640810  T
Q  428 tc 429  Q
    ||    
T  15640811 tc 15640812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 344 - 429
Target Start/End: Complemental strand, 31090427 - 31090342
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| ||||||||||||||||||| || || ||||||||||| ||||| |||||| ||||||| ||||| | |||||||||||||    
T  31090427 cttttcgtccctgtaatattagcgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattc 31090342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 26252603 - 26252511
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| |||| |||||||| ||| ||||| |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  26252603 cttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 26252511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 36887680 - 36887784
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||||||||||||||||||||||| ||  ||||||||||||| ||||| ||||| ||||||||   ||| ||| |||| |||||| |    
T  36887680 gggttaatacctcttttggtccctgtaatattagcgaattttggttttagtccctgtaaaaaaaaaagtttagattccatccctatcatttgagattctt 36887779  T
Q  432 ccact 436  Q
    |||||    
T  36887780 ccact 36887784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 330 - 436
Target Start/End: Original strand, 31090058 - 31090165
Alignment:
Q  330 ttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagatt 428  Q
    |||||| |||||| ||||| |||||||||||||||| || || || ||||||||||| ||||| ||||| ||||||||| ||||| | |||||||| |||    
T  31090058 ttgggtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 31090157  T
Q  429 cctccact 436  Q
    | ||||||    
T  31090158 cttccact 31090165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 345 - 436
Target Start/End: Complemental strand, 38574333 - 38574242
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||| ||||||||||||||||||| ||| ||||||||||||| ||||  |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  38574333 ttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttccact 38574242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 322 - 424
Target Start/End: Complemental strand, 41947242 - 41947142
Alignment:
Q  322 tttttattttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatt 421  Q
    |||||||||||||| ||||   ||||| ||||||||||||||||||| || |||||||||||| | ||||  |||||| ||||||| ||||||| |||||    
T  41947242 tttttattttgggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtccttttaaa--aaaaaaattagattttgtccttgtaatt 41947145  T
Q  422 tca 424  Q
    |||    
T  41947144 tca 41947142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 436
Target Start/End: Original strand, 31943945 - 31944054
Alignment:
Q  327 attttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaa-ataaaaaatttagattatgtccttataatttcag 425  Q
    |||| |||| |||||| ||||| ||||||||||||||||||| ||||||||||||| ||| |||| | |||| ||||||||| ||||| | ||||||||     
T  31943945 atttagggtaaatact-cttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcat 31944043  T
Q  426 attcctccact 436  Q
    |||| ||||||    
T  31944044 attcttccact 31944054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 15641082 - 15640989
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||| ||||||||||| || ||||||||||| | ||| ||||| ||||| ||||||||||||||| | ||||||||||||| ||||||    
T  15641082 cttttcgtccttgtaatattagtgaattccggttttaattcctgtaaaaaaaaaagatttagattatgtccctgtaatttcagattcttccact 15640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 436
Target Start/End: Complemental strand, 3274000 - 3273894
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagat 427  Q
    |||||||| |||||  ||||| ||||| ||||||||||||| || |||||||||||||| ||||| |||| ||||||||| | ||| | |||||||||||    
T  3274000 ttttgggtaaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccctataaaa-aaaagatttagattttatccctgtaatttcagat 3273903  T
Q  428 tcctccact 436  Q
    || ||||||    
T  3273902 tcttccact 3273894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 31944328 - 31944224
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||| |||||| ||||| |||| |||||||||||||| || ||||||||||| || ||||| |||| | ||||||| ||||| | |||||||| |||| |    
T  31944328 gggtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtctctgtaaaaaaaaataattagattttgtccatgtaatttcatattctt 31944229  T
Q  432 ccact 436  Q
    |||||    
T  31944228 ccact 31944224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 34063994 - 34064086
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||| ||| |||  |||||||||||| ||||| |||| ||||||||| ||||  | ||||||||||||| ||||||    
T  34063994 cttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttccact 34064086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 50462774 - 50462670
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||||||||||||||||||||||| ||||  |||| ||||   ||||| ||||| |||| ||| |||| |||| ||||||||||| |    
T  50462774 gggttaatacctcttttggtccctgtaatattagcgaattccaattttggtcctcgtaaaaaaaaaagtttaaattctgtcattatcatttcagattctt 50462675  T
Q  432 ccact 436  Q
    |||||    
T  50462674 ccact 50462670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 53896446 - 53896549
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  |||||| || ||||||||| ||||| ||||||||||||||||| ||||| ||||| ||||||||   ||| ||| |||| ||||||||    
T  53896446 gggttaatacctcttttgatcgctgtaatatgagcgaattccggttttagtccctgtaaaa-aaaaagtttagattccatccctatcattttagattcct 53896544  T
Q  432 ccact 436  Q
    |||||    
T  53896545 ccact 53896549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 436
Target Start/End: Original strand, 35376176 - 35376266
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||| ||||||||||||||||||| ||| ||||||||||||| ||||| |||| ||||||||| ||||  | |||||| |||||| ||||||    
T  35376176 ttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaa-aaaagatttagattttgtctctgtaattttagattcttccact 35376266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 37013066 - 37012981
Alignment:
Q  350 gtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||||||||||||||||| ||| ||||||||||||| || || |||||| ||||||| ||||| | |||||||| |||| ||||||    
T  37013066 gtccctgtaatattagcgaattctggttttagtccctgtataa-aaaaaaattagattttgtccctgtaatttcatattcttccact 37012981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 429
Target Start/End: Complemental strand, 3018376 - 3018293
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| ||||||||||||||| ||| || |||||||||||||| ||||| |||| ||||||||| ||||| | |||||||||||||    
T  3018376 cttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaa-aaaagatttagatt-tgtccgtgtaatttcagattc 3018293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 13131952 - 13132045
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||| |||||||||| ||| || | |||||||||||| ||||| ||||| ||||||||||||| | | ||||||||||||| ||||||    
T  13131952 cttttcgtccttgtaatattaacgaatttctgttttagtccctgtaaaaaaaaaagatttagattatgttcatgtaatttcagattcttccact 13132045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 20069664 - 20069574
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||| ||||| |||| ||||| |||||| ||||  ||||| |||||||||||||| ||| |||| |||||| ||||||    
T  20069664 cttttcgtccctgtaatatgagcgaattccagttttggtccctgtaaa--aaaaagtttagattatgtccctatcatttgagattcttccact 20069574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 424
Target Start/End: Original strand, 9396711 - 9396791
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttca 424  Q
    ||||| ||||||||||||||||||| || || |||||||| || | ||| |||| ||||||||| ||||| ||||||||||    
T  9396711 cttttcgtccctgtaatattagcgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatttca 9396791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 31083463 - 31083371
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||| ||||| |||||||||| || ||  ||||| | |||||||||||| ||||| ||| |||| |||||| ||||||    
T  31083463 cttttcgtccctgtaatatgagcgaattccggttttggttccagtaaaaaataaaatttagattttgtccctatcatttgagattcttccact 31083371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 35376493 - 35376402
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||| | |||| |||||||||||| ||||| |||| ||||| ||| ||||| | |||||||||| || ||||||    
T  35376493 cttttcgtccctgtaatattagcaaattccagttttagtccctgtaaaa-aaaagatttaaattttgtccctgtaatttcagaatcttccact 35376402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 391
Target Start/End: Complemental strand, 31218347 - 31218300
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaa 391  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  31218347 cttttcgtccctgtaatattagcgaattccggttttagtccctgtaaa 31218300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 436
Target Start/End: Original strand, 37012709 - 37012811
Alignment:
Q  334 gttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctcc 433  Q
    ||||||||  ||||| |||| |||||||||||||| |||   ||| ||||| | ||||| |||| ||||||||| ||||| | ||||||||||||| |||    
T  37012709 gttaatacctcttttcgtccttgtaatattagcgaattctaatttcagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcc 37012808  T
Q  434 act 436  Q
    |||    
T  37012809 act 37012811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 428
Target Start/End: Original strand, 41946977 - 41947058
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagatt 428  Q
    ||||| |||||||||||||||| || |||||||||||||||||  ||   |||||| ||||||| ||||| | ||||||||||||    
T  41946977 cttttcgtccctgtaatattagtgaattccggttttagtccctgcaa---aaaaaaattagattttgtccctgtaatttcagatt 41947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 46934071 - 46934136
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaa 397  Q
    |||||||||  |||||||||||||||||||||| | | ||||||||||||||| | ||||| ||||    
T  46934071 gggttaatatcacttttggtccctgtaatattaacaaattccggttttagtccgtgtaaaaaaaaa 46934136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 335 - 424
Target Start/End: Complemental strand, 48580241 - 48580152
Alignment:
Q  335 ttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttca 424  Q
    |||||||  ||||| ||||||||||||||||||| ||||||||||| |||   ||||| |||  ||||||||| ||||| | ||||||||    
T  48580241 ttaatacctcttttcgtccctgtaatattagcgaattccggttttaatcctgataaaaaaaacgatttagattttgtccctgtaatttca 48580152  T

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Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 38573981 - 38574072
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||| ||||||||||| || ||||| ||||| ||||| ||||| |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  38573981 cttttcgtccatgtaatattagtgaattccgattttaatccctgtaaaa-aaaagatttagattttgtccctgtaatttcatattcttccact 38574072  T

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Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 392
Target Start/End: Complemental strand, 51029139 - 51029091
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaa 392  Q
    ||||||||||||||||||| ||||| || |||||||||||||| |||||    
T  51029139 cttttggtccctgtaatatgagcgaatttcggttttagtccctgtaaaa 51029091  T

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Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 436
Target Start/End: Original strand, 7819040 - 7819118
Alignment:
Q  357 taatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||||| ||||||||||||| | | ||||  |||| ||||||||| ||||| | ||||||||||||| ||||||    
T  7819040 taatattagcgaattccggttttagt-catgtaaataaaaagatttagattttgtccctgtaatttcagattcttccact 7819118  T

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Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 436
Target Start/End: Complemental strand, 13132304 - 13132215
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||| ||||||||||||||||||| || || ||||||| ||| ||||| |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  13132304 ttttcgtccctgtaatattagcgaatttcgattttagt-cctgtaaaa-aaaagatttagattctgtccctgtaatttcatattcttccact 13132215  T

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Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 399
Target Start/End: Complemental strand, 18667668 - 18667601
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaa 399  Q
    ||||||||||  ||||| ||||||||||||||||||| |||| |||||| ||| | ||||| ||||||    
T  18667668 gggttaatacctcttttcgtccctgtaatattagcgaattccagttttaatccttgtaaaaaaaaaaa 18667601  T

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Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 392
Target Start/End: Original strand, 46046443 - 46046490
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaa 392  Q
    |||| ||||||||||||||||||| ||||| ||||||||||| |||||    
T  46046443 ttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaa 46046490  T

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Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 462
Target Start/End: Complemental strand, 36699603 - 36699472
Alignment:
Q  333 ggttaatactacttttggtccctgtaatattagcgattt---ccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    |||||| ||| |||||| || ||||||||||||||| ||   | ||||||||||| | ||||| ||| |||||||||||||||| | |||||| ||||||    
T  36699603 ggttaacactgcttttgatctctgtaatattagcgaattgatctggttttagtccttataaaa-aaataatttagattatgtccctgtaattttagattc 36699505  T
Q  430 ctccactgtcagtccatcatttaagcatgtcag 462  Q
     || ||| ||   || |||||||| ||||||||    
T  36699504 ttctactttcgaaccctcatttaaacatgtcag 36699472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 429
Target Start/End: Original strand, 48579869 - 48579963
Alignment:
Q  335 ttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    |||||||  ||||| ||||||||||||||| |||  | |||||||||||  | ||||| |||| ||||||||| ||||  | |||||||||||||    
T  48579869 ttaatacctcttttcgtccctgtaatattaacgaagttcggttttagtctatgtaaaaaaaaagatttagattttgtctctgtaatttcagattc 48579963  T

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Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 385
Target Start/End: Original strand, 3273633 - 3273674
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccc 385  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||    
T  3273633 cttttcgtccctgtaatattagcgaattccgattttagtccc 3273674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 48260116 - 48260025
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||  | ||||| || || ||||| |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  48260116 cttttcgtccctgtaatattagcgaattttgattttaatctctgtaaaa-aaaagatttagattttgtccctgtaatttcaaattcttccact 48260025  T

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Target: scaffold0117 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 12357 - 12256
Alignment:
Q  335 ttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctcca 434  Q
    |||||||  ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | ||||||||||||| ||||    
T  12357 ttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 12258  T
Q  435 ct 436  Q
    ||    
T  12257 ct 12256  T

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Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 429
Target Start/End: Original strand, 33131633 - 33131730
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||||||||  | ||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||| ||||| ||| |||||||||||    
T  33131633 gggttaataccccctttggtccctgtaatatgagcgatttccggttttagtccctgtaaataaaaaaatttagattctgtccctatcatttcagattc 33131730  T

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Target: chr7; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 28218190 - 28218283
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||| ||||| | ||||||||||||| ||||||    
T  28218190 cttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 28218283  T

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Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 28218529 - 28218437
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||  |||| ||||||||| ||||| | ||||||||||||| ||||||    
T  28218529 cttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccact 28218437  T

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Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 41600324 - 41600232
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||  |||| ||||||||| ||||| | ||||||||||||| ||||||    
T  41600324 ctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccact 41600232  T

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Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 436
Target Start/End: Original strand, 6465868 - 6465958
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||| |||| |||||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||| ||| ||||||||||||| ||||||    
T  6465868 ttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaa-aaaatatttagattatgttcttgtaatttcagattcttccact 6465958  T

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Target: chr7; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 12006553 - 12006644
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||| ||||| |||||| ||||||| ||||| | ||||||||||||| ||||||    
T  12006553 cttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaa-aaaaaaattagattttgtccctgtaatttcagattcttccact 12006644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 330 - 434
Target Start/End: Original strand, 20419534 - 20419638
Alignment:
Q  330 ttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    |||||| |||||  ||||| |||||| |||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | |||||||| ||||    
T  20419534 ttgggtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 20419633  T
Q  430 ctcca 434  Q
     ||||    
T  20419634 ttcca 20419638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 20419917 - 20419817
Alignment:
Q  330 ttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagatt 428  Q
    |||||| |||||  ||||| ||||||||||||||| ||| ||||||||||||||||| ||||| ||||| ||||||||| ||||| | ||||||||||||    
T  20419917 ttgggtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagatt 20419818  T
Q  429 c 429  Q
    |    
T  20419817 c 20419817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 328 - 428
Target Start/End: Original strand, 23274921 - 23275020
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagat 427  Q
    ||||||||||||||  |||||||||| |||||||| ||||| || || |||||||| || ||||||||||| |||||||||||| ||| |||||||||||    
T  23274921 ttttgggttaataccccttttggtccttgtaatatgagcgaatttcgattttagtctctataaaataaaaagtttagattatgt-cttgtaatttcagat 23275019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 331 - 434
Target Start/End: Original strand, 23383498 - 23383602
Alignment:
Q  331 tgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattc 429  Q
    ||||| |||||| ||||| ||| |||||||||||| || ||||||||||||||||| ||||| ||||| ||||||||| ||||| |||||||||| ||||    
T  23383498 tgggtaaatacttcttttcgtctctgtaatattagtgaattccggttttagtccctataaaaaaaaaagatttagattttgtccctataatttcatattc 23383597  T
Q  430 ctcca 434  Q
     ||||    
T  23383598 ttcca 23383602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 436
Target Start/End: Original strand, 20458705 - 20458795
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||| ||||||||||||||| ||| ||||||||||||||||| | |||||||||||||||||| ||||  | ||||||||||||| ||||||    
T  20458705 ttttcgtccctgtaatattaacgaattccggttttagtccctgt-aaataaaaaatttagattttgtcgctgtaatttcagattcttccact 20458795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 344 - 429
Target Start/End: Complemental strand, 20963859 - 20963775
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||| | ||||||||||||  |||| | |||||||||||||    
T  20963859 ctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaa-ataaaatttagatttagtccctgtaatttcagattc 20963775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 330 - 435
Target Start/End: Original strand, 41599956 - 41600061
Alignment:
Q  330 ttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    |||||| |||||  |||||  |||||||||||||||||| || |||||||||||| | ||||| |||| ||||||||| ||||| | |||||||||||||    
T  41599956 ttgggtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtccatataaaaaaaaatatttagattttgtccctgtaatttcagattc 41600055  T
Q  430 ctccac 435  Q
     |||||    
T  41600056 ttccac 41600061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 7842445 - 7842543
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||||||||| |||||||||||     |||||||||| ||| ||||||||||||| ||||| ||||| |||||||| ||||| | |||||||||||||||    
T  7842445 gggttaataccacttttggtcc-----atattagcgaattctggttttagtccctgtaaaa-aaaaagtttagattctgtccctgtaatttcagattcct 7842538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 23705026 - 23704935
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  23705026 cttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaa-aaaagatttagattttgtccctgtaatttcatattcttccact 23704935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 436
Target Start/End: Original strand, 16995198 - 16995303
Alignment:
Q  330 ttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    |||||| |||||  ||||| ||| ||||||||||||||| || |||||||||| ||| ||||| |||| ||||||||| ||||| | |||||||||||||    
T  16995198 ttgggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgtaaaa-aaaatatttagattttgtccctgtaatttcagattc 16995296  T
Q  430 ctccact 436  Q
     ||||||    
T  16995297 ttccact 16995303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 436
Target Start/End: Original strand, 38879718 - 38879828
Alignment:
Q  327 attttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcag 425  Q
    ||||||||| |||||  ||||| ||||||||||||||||||| ||||  ||||||| ||| ||||| ||||| ||||||||| ||||| | ||||||||     
T  38879718 attttgggtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcat 38879817  T
Q  426 attcctccact 436  Q
    |||| ||||||    
T  38879818 attcttccact 38879828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 436
Target Start/End: Complemental strand, 38880100 - 38879998
Alignment:
Q  331 tgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcc 430  Q
    ||||| |||||  ||||| ||||||||||||||||| | |||||||||||||  || ||||| |||||||||||||| ||||| | |||||||||||||     
T  38880100 tgggtaaatacctcttttcgtccctgtaatattagcaaattccggttttagt--ctttaaaa-aaaaaatttagattttgtccctgtaatttcagattct 38880004  T
Q  431 tccact 436  Q
    ||||||    
T  38880003 tccact 38879998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 12006895 - 12006814
Alignment:
Q  355 tgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||||||| ||||| ||||||||||| ||||  |||| ||||||||| ||||| | ||||||||||||| ||||||    
T  12006895 tgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccact 12006814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 429
Target Start/End: Complemental strand, 25772697 - 25772612
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| |||||| ||||||||| || |||| |||||||||||| ||||| |||| ||||||||| ||||| | |||||||||||||    
T  25772697 cttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattc 25772612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 1250572 - 1250480
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||| |||||||||||||| |||| ||||||||| || |||| ||||| ||||||||| ||||| | |||||||| |||| ||||||    
T  1250572 cttttcgtccttgtaatattagcgaattccagttttagtctctgtaaactaaaagatttagattttgtccctttaatttcatattcttccact 1250480  T

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Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 435
Target Start/End: Complemental strand, 14647028 - 14646924
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaa-tttagattatgtccttataatttcagattcc 430  Q
    ||||||||||   |||| ||||||||||||| ||||| ||||||||||||||||| ||||| |||||| |||||||| | ||| | | |||||||||||     
T  14647028 gggttaataccctttttagtccctgtaatatgagcgaattccggttttagtccctgtaaaaaaaaaaagtttagattctatccctgtcatttcagattct 14646929  T
Q  431 tccac 435  Q
    |||||    
T  14646928 tccac 14646924  T

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Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 23704674 - 23704765
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||||||||| || || ||||| |||| ||||| ||| ||||| | ||||||||||||| ||||||    
T  23704674 cttttcgtccctgtaatattagcgaattccggttttactcactgtaaaa-aaaagatttacattttgtccctgtaatttcagattcttccact 23704765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 48672645 - 48672553
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||| ||||||||||||||| || |||||||||||||| ||||  |||| ||||||||| | ||| | ||||||||||||| ||||||    
T  48672645 cttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattcttccact 48672553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 435
Target Start/End: Complemental strand, 14801013 - 14800931
Alignment:
Q  353 cctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccac 435  Q
    |||||||||| ||||| || |||||||||||||| ||||| ||||| |||||||| ||||| | | ||||||||||| |||||    
T  14801013 cctgtaatatgagcgaatttcggttttagtccctgtaaaaaaaaaagtttagattttgtccctgtcatttcagattcttccac 14800931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 435
Target Start/End: Complemental strand, 15248005 - 15247923
Alignment:
Q  353 cctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccac 435  Q
    |||||||||| ||||| || |||||||||||||| ||||| ||||| |||||||| ||||| | | ||||||||||| |||||    
T  15248005 cctgtaatatgagcgaatttcggttttagtccctgtaaaaaaaaaagtttagattttgtccctgtcatttcagattcttccac 15247923  T

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Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 436
Target Start/End: Complemental strand, 24195135 - 24195070
Alignment:
Q  371 tccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||||||||| ||||| |||| ||||||||| ||||||| |||||||| |||| ||||||    
T  24195135 tccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccact 24195070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 44816851 - 44816939
Alignment:
Q  350 gtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa--atttagattatgtccttataatttcagattcctccact 436  Q
    ||||||||||||||||||| || ||||||||||| || ||||| |||||  |||| |||| ||||| | ||||||||||||| ||||||    
T  44816851 gtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaaaagattttgattttgtccctgtaatttcagattcttccact 44816939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 429
Target Start/End: Original strand, 7657981 - 7658068
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa--atttagattatgtccttataatttcagattc 429  Q
    ||||| |||| |||||||||||||| || |||||||| ||||| ||||| |||||  ||||||||||||||| | |||||||| ||||    
T  7657981 cttttcgtccatgtaatattagcgaatttcggttttaatccctgtaaaaaaaaaaagatttagattatgtccatgtaatttcaaattc 7658068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 20459056 - 20458965
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||||||||||||||| || ||||||||| ||| ||| ||||| |||| ||||||||| ||||  | ||||||||||||| ||||||    
T  20459056 cttttcgtccctgtaatattagggaattccggttt-agtacctgtaaaaaaaaagatttagattttgtcactgtaatttcagattcttccact 20458965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 25772376 - 25772467
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| || || |||||||  || ||||| |||| ||||||||| ||||||| |||||||| |||| ||||||    
T  25772376 cttttcgtccctgtaatattagcgaatttcgattttagtttctgtaaaa-aaaagatttagattttgtccttgtaatttcatattcttccact 25772467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 407
Target Start/End: Complemental strand, 23258290 - 23258228
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagatt 407  Q
    ||||||||| ||||||||||||||| |||||||||| |||||| ||||| ||||| ||||||||    
T  23258290 cttttggtctctgtaatattagcgaattccggttttggtccctgtaaaa-aaaaagtttagatt 23258228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 435
Target Start/End: Complemental strand, 23383866 - 23383775
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccac 435  Q
    ||||| |||||||||||||||| || ||| | |||||||||||  |||| |||| ||||||||| ||||| | |||||||| |||| |||||    
T  23383866 cttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattcttccac 23383775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 428
Target Start/End: Complemental strand, 6466161 - 6466087
Alignment:
Q  354 ctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagatt 428  Q
    ||||||||||||||| || ||||||||||| || ||||| |||| |||| |||| ||||| | ||||||||||||    
T  6466161 ctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttggattctgtccgtgtaatttcagatt 6466087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 10409728 - 10409648
Alignment:
Q  355 tgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||||||| ||||| ||||||||||| ||||| |||| ||||||||| ||||  | |||||| |||||| ||||||    
T  10409728 tgtaatattagcgaattccgattttagtccctgtaaaa-aaaagatttagattttgtctctgtaattttagattcttccact 10409648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 429
Target Start/End: Complemental strand, 33133502 - 33133418
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||||||||||||||||  || ||  |||||||||||||||| ||||| ||||| ||||||| |||||| ||| |||| ||||||    
T  33133502 cttttggtccctgtaatacgagtgaaatccggttttagtccctgtaaaa-aaaaagtttagatcatgtccctatcatttgagattc 33133418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 33162902 - 33162809
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||| ||||||||||||||| || | |||||||||| | ||||| ||||| |||| ||||||||| || |||||||| |||| ||||||    
T  33162902 cttttcgtctctgtaatattagcgaatttctgttttagtccttataaaaaaaaaagatttggattatgtcattgtaatttcaaattcttccact 33162809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 436
Target Start/End: Original strand, 20963507 - 20963599
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcctccact 436  Q
    |||| |||||||||||||||| || |||  |||||||||||| ||||| ||||| |||||||||  |||| | |||||| |||||| ||||||    
T  20963507 ttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaaaagatttagatttagtccctgtaattttagattcttccact 20963599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 48672289 - 48672383
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa--atttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||||||||||||||| || || ||||||||||| || ||||| |||||  |||||||||  |||  | ||||||||||||| ||||||    
T  48672289 cttttcgtccctgtaatattagtgaatttcggttttagtctctgtaaaaaaaaaaagatttagatttcgtctctgtaatttcagattcttccact 48672383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 435
Target Start/End: Original strand, 14630359 - 14630437
Alignment:
Q  355 tgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccac 435  Q
    |||||||| ||||| ||||||||||||||||| ||||  |||||  ||||||| ||||| | | ||||||||||| |||||    
T  14630359 tgtaatatgagcgaattccggttttagtccctgtaaa--aaaaaggttagattctgtccctgtcatttcagattcttccac 14630437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 428
Target Start/End: Original strand, 48648274 - 48648357
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagatt 428  Q
    ||||| ||||||||||||| ||||| || || ||||||||| | ||| | |||| ||||||||| ||||| | ||||||||||||    
T  48648274 cttttcgtccctgtaatatcagcgaatttcgattttagtccatgtaaga-aaaagatttagattttgtccctgtaatttcagatt 48648357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 436
Target Start/End: Complemental strand, 48648600 - 48648503
Alignment:
Q  337 aatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||| ||||| ||||| ||||||||||||| || || |||||||  ||||| || |||| ||||||||| ||||  | |||||| |||||| ||||||    
T  48648600 aatacttcttttcgtcccagtaatattagcgaatttcgattttagt--ctctataaaaaaagatttagattttgtctatgtaattttagattcttccact 48648503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 328 - 436
Target Start/End: Complemental strand, 23979283 - 23979175
Alignment:
Q  328 ttttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagat 427  Q
    |||||||| |||||  ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | |||||||| ||    
T  23979283 ttttgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaat 23979184  T
Q  428 tcctccact 436  Q
    || ||||||    
T  23979183 tcttccact 23979175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 436
Target Start/End: Complemental strand, 17762672 - 17762556
Alignment:
Q  321 ctttttatttt-gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataa 419  Q
    ||||||||||| |||| |||||  ||||| ||||||||| ||||||||| ||| ||||||||||||| ||||| |||| ||||||||| |||||  ||||    
T  17762672 ctttttattttagggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccataa 17762573  T
Q  420 tttcagattcctccact 436  Q
    |||||||||| ||||||    
T  17762572 tttcagattcttccact 17762556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 24837181 - 24837273
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||||||||||| |||||| ||||||||||||||||| ||||| |||| ||||||||| ||||||| |||||||| |||| ||||||    
T  24837181 cttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccact 24837273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 436
Target Start/End: Original strand, 7125915 - 7126021
Alignment:
Q  329 tttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagatt 428  Q
    ||||| |||||||  ||||| || |||||||||||||||| ||||| ||||||||||| ||||| |||| ||||||||| ||||| ||||||||||||||    
T  7125915 tttggtttaatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgtaaaa-aaaagatttagattttgtccctataatttcagatt 7126013  T
Q  429 cctccact 436  Q
    | ||||||    
T  7126014 cttccact 7126021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 436
Target Start/End: Complemental strand, 18336836 - 18336730
Alignment:
Q  329 tttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagatt 428  Q
    ||||||| |||||  ||||| |||||||||| |||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | ||||||||||||    
T  18336836 tttgggtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagatt 18336738  T
Q  429 cctccact 436  Q
    | ||||||    
T  18336737 cttccact 18336730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 436
Target Start/End: Complemental strand, 41001717 - 41001627
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||| ||||||||||||||||||| ||||||||||||||| | ||||| |||| ||||||||| ||||| ||||||||||||||| ||||||    
T  41001717 ttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaa-aaaagatttagattttgtccctataatttcagattcttccact 41001627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 41424516 - 41424646
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  |||||||||| || ||||||||||| |||||||||  |||| | ||||| ||||| |||||||| ||||| | | ||||||||||| |    
T  41424516 gggttaatacctcttttggtccttgcaatattagcgaattccggtttaggtccttgtaaaaaaaaaagtttagattctgtccctgtcatttcagattctt 41424615  T
Q  432 ccactgtcagtccatcatttaagcatgtcag 462  Q
    ||||| | ||||| |||||||| ||||||||    
T  41424616 ccacttttagtccctcatttaaacatgtcag 41424646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 436
Target Start/End: Complemental strand, 14144288 - 14144175
Alignment:
Q  323 ttttattttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataattt 422  Q
    |||||||| ||||||||||  ||||| ||| ||||||||||| ||| ||||| ||||||||||| ||||| |||| ||||||||| ||||| | ||||||    
T  14144288 ttttatttagggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaattt 14144189  T
Q  423 cagattcctccact 436  Q
    || |||| ||||||    
T  14144188 caaattcttccact 14144175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 436
Target Start/End: Original strand, 31799639 - 31799744
Alignment:
Q  331 tgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcc 430  Q
    ||||| |||||  ||||| |||||| |||||||||||| ||||||||| ||||||| ||||| |||| ||||||||| ||||| | |||||||||||||     
T  31799639 tgggtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 31799738  T
Q  431 tccact 436  Q
    ||||||    
T  31799739 tccact 31799744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 6817135 - 6817226
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||| ||||||||||| || ||||||||||||||||| ||||| |||| ||||||||||||||| | ||||||||||||| ||||||    
T  6817135 cttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaa-aaaagatttagattatgtccatgtaatttcagattcttccact 6817226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 14143914 - 14144005
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  14143914 cttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaa-aaaagatttagattttgtccctgtaatttcatattcttccact 14144005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 22571077 - 22571181
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||||||||||  |||| |||| |||||||||||||| ||||| ||||||||||| ||||| |||||||||||||||| ||  | |||||||| |||| |    
T  22571077 gggttaatactgatttttgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatttagattatatctctgtaatttcatattctt 22571176  T
Q  432 ccact 436  Q
    |||||    
T  22571177 ccact 22571181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 29445171 - 29445080
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| |||| |||||||||| | ||||| |||| ||||||||| ||||||| ||||||||||||| ||||||    
T  29445171 cttttcgtccctgtaatattagcgaattccagttttagtcc-tgtaaaaaaaaagatttagattttgtccttgtaatttcagattcttccact 29445080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 436
Target Start/End: Original strand, 14411692 - 14411801
Alignment:
Q  327 attttgggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcaga 426  Q
    |||| |||| |||||  ||||| ||||||||||||||||||| ||||||||||||||||| || || |||| ||||| ||| ||||  | ||||||||||    
T  14411692 atttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtataaaaaaagatttatattttgtctatgtaatttcaga 14411791  T
Q  427 ttcctccact 436  Q
    ||| ||||||    
T  14411792 ttcttccact 14411801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 344 - 429
Target Start/End: Complemental strand, 24837535 - 24837450
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| ||||||||||||||||||| |||| |||||||||||| ||||| |||| ||||||||| ||||| | |||||||| ||||    
T  24837535 cttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattc 24837450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 28071876 - 28071771
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctct-aaaataaaaaatttagattatgtccttataatttcagattcc 430  Q
    ||||||||||  ||||||||||||||||||| ||||| || |||||||||||  | | |||| |||||| ||||||||| ||||| |||||||||||||     
T  28071876 gggttaataccccttttggtccctgtaatatgagcgaatttcggttttagtcattgtaaaaaaaaaaaaattagattatatccttgtaatttcagattct 28071777  T
Q  431 tccact 436  Q
    ||||||    
T  28071776 tccact 28071771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 17762295 - 17762386
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||| ||| ||| | | ||||||||||||| ||||||    
T  17762295 ctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaa-aaaagatttatattttgttcctgtaatttcagattcttccact 17762386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 28070466 - 28070594
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||||||||| | |||||||||||||||||| || || |||  |||||||||||| ||||  ||||  |||||||| ||||||| ||||||||||||| |    
T  28070466 gggttaataccatttttggtccctgtaatatgagtgaattctagttttagtccctgtaaa--aaaaggtttagattctgtccttgtaatttcagattctt 28070563  T
Q  432 ccactgtcagtccatcatttaagcatgtcag 462  Q
    ||||| | ||||| ||| |||| | ||||||    
T  28070564 ccactttgagtccctcacttaaacttgtcag 28070594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 435
Target Start/End: Complemental strand, 14412018 - 14411941
Alignment:
Q  357 taatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccac 435  Q
    |||||||| ||| || |||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||| |||||    
T  14412018 taatattaacgaatttcggttttagtccctgtaaaa-aaaaaatttagattttgtccttgtaatttcagattcttccac 14411941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 429
Target Start/End: Original strand, 18336479 - 18336565
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattc 429  Q
    ||||| |||||| |||||||||||| ||||| ||||||||||| ||||| ||||| ||||||||| ||||| | |||||||||||||    
T  18336479 cttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 18336565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 436
Target Start/End: Original strand, 993755 - 993851
Alignment:
Q  337 aatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||| ||||| ||| ||||||||||||||| ||||||||||||||||| |||   |||||| |||||||  |||||| |||||||| |||| ||||||    
T  993755 aatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgtaa---aaaaaaattagatttagtccttgtaatttcatattcttccact 993851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 436
Target Start/End: Complemental strand, 7126276 - 7126191
Alignment:
Q  351 tccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||||||||||||| ||||||||||||||  | ||||| |||| ||||||||| ||||| | |||||||| |||| ||||||    
T  7126276 tccctgtaatattagcgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 7126191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 429
Target Start/End: Original strand, 29444818 - 29444903
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| ||||||||||||||| ||| ||| | ||||||||||| ||||| |||  ||||||||||||||||| |||||||| ||||    
T  29444818 cttttcgtccctgtaatattaacgaattctgattttagtccctgtaaaaaaaaggatttagattatgtccttgtaatttcatattc 29444903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 429
Target Start/End: Complemental strand, 31800005 - 31799921
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| |||||| |||||||||||| ||||||||||||| ||| ||||| |||| ||||||||| ||||| | |||||||||||||    
T  31800005 cttttcgtccctataatattagcgaattccggttttagt-cctgtaaaaaaaaagatttagattttgtccatgtaatttcagattc 31799921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 24074315 - 24074407
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||| |||||||||||||| || |||||||||||||| ||||| |||| ||||||||| ||||  | |||||||| |||| ||||||    
T  24074315 cttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattcttccact 24074407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 436
Target Start/End: Complemental strand, 994111 - 994020
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||| ||||| |||||| |||||| || |||||||||||||| || ||||||| ||||||||| ||||| | ||||| ||||||| ||||||    
T  994111 tttttgtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagattcttccact 994020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 429
Target Start/End: Complemental strand, 4919355 - 4919271
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattc 429  Q
    ||||| ||| ||| ||||||||||| ||||||||||||| ||| ||||| |||||| ||||||| ||||| | |||||||||||||    
T  4919355 cttttcgtctctggaatattagcgaattccggttttagttcctgtaaaa-aaaaaaattagattttgtccctgtaatttcagattc 4919271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 436
Target Start/End: Complemental strand, 24074649 - 24074576
Alignment:
Q  363 tagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||| ||||||||||| ||||| ||||| |||| ||||||||| ||||||| |||||||| |||| ||||||    
T  24074649 tagcgaattccggttttaatccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccact 24074576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 20709589 - 20709486
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||| |||| |||||||||| ||| ||  ||||||||||||| ||||| |||| ||||||||| ||||| | |||||||| |||| |    
T  20709589 gggttaatacctcttttcgtccatgtaatattaacgaattttggttttagtccctgtaaaa-aaaagatttagattttgtccatgtaatttcatattctt 20709491  T
Q  432 ccact 436  Q
    |||||    
T  20709490 ccact 20709486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 24651065 - 24650973
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||| ||||||||||||||| ||||||||||||||| | ||||| | ||||| |||||| | ||| | |||||| |||||| ||||||    
T  24651065 cttttcgtctctgtaatattagcgaattccggttttagtccatgtaaaaaagaaaatctagattttatccctgtaattttagattcttccact 24650973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 41001374 - 41001457
Alignment:
Q  350 gtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||||||||||||||||| || |||||||||||||| |||   |||||| ||||||| ||||| | |||||||| |||| ||||||    
T  41001374 gtccctgtaatattagcgaatttcggttttagtccctgtaa---aaaaaaattagattttgtccctgtaatttcatattcttccact 41001457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 354 - 436
Target Start/End: Original strand, 4919011 - 4919094
Alignment:
Q  354 ctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcctccact 436  Q
    ||||||||||||||| || |||||||||| ||| ||||| ||||| ||||||||| ||||| | |||||||| |||| ||||||    
T  4919011 ctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 4919094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 436
Target Start/End: Complemental strand, 20959441 - 20959365
Alignment:
Q  358 aatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||||||||| || ||||||||||| |  |||||  ||||||||||||| ||||| |  |||||||||||||||||||    
T  20959441 aatattagcgaatttcggttttagtcaccataaaa--aaaaatttagattttgtccctgcaatttcagattcctccact 20959365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 41425830 - 41425699
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaa-tttagattatgtccttataatttcagattcc 430  Q
    ||||||||||  ||||||||||||| ||||| ||||| ||| | |||| |||| | ||||| |||||| |||||||| | ||| | | |||||||||||     
T  41425830 gggttaatacctcttttggtccctgcaatatcagcgaattctgattttggtccttgtaaaaaaaaaaagtttagattctatccctgtcatttcagattct 41425731  T
Q  431 tccactgtcagtccatcatttaagcatgtcag 462  Q
    ||||   | ||||| |||||||| ||||||||    
T  41425730 tccatctttagtccctcatttaaacatgtcag 41425699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 436
Target Start/End: Complemental strand, 6817455 - 6817395
Alignment:
Q  376 ttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||| || ||||| |||||||||||||| ||||| | |||||||| |||| ||||||    
T  6817455 ttttagtctctgtaaaaaaaaaaatttagattttgtccctgtaatttcatattcttccact 6817395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 27158991 - 27159094
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    ||||||||||  ||||| |||| |||||||||||||| || | ||||||||| |  | ||| |||| ||||| ||| ||||| | ||||||||||||| |    
T  27158991 gggttaatacctcttttcgtccatgtaatattagcgaatttcagttttagtctcagttaaa-aaaagatttaaattttgtccctgtaatttcagattctt 27159089  T
Q  432 ccact 436  Q
    |||||    
T  27159090 ccact 27159094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 422
Target Start/End: Complemental strand, 27159320 - 27159245
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataattt 422  Q
    ||||| |||| |||||||||||||| || |||||||||||| | |||   |||||||||||||| ||||| | ||||||    
T  27159320 cttttcgtccttgtaatattagcgaatttcggttttagtccttgtaa---aaaaaatttagattttgtccctgtaattt 27159245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 428
Target Start/End: Original strand, 30512300 - 30512383
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagatt 428  Q
    ||||| |||||||||||||||| || ||  ||||||||||||| ||||| |||  |||||||||  |||| | ||||||||||||    
T  30512300 cttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaa-aaaggatttagatttggtccctgtaatttcagatt 30512383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 428
Target Start/End: Original strand, 30552640 - 30552723
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagatt 428  Q
    ||||| |||||||||||||||| || ||  ||||||||||||| ||||| |||  |||||||||  |||| | ||||||||||||    
T  30552640 cttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaa-aaaggatttagatttggtccctgtaatttcagatt 30552723  T

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Target: scaffold0352 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 6045 - 5952
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaa-tttagattatgtccttataatttcagattcctccact 436  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||| ||||| |||||| |||||||| ||||| | ||||||||||||||||||||    
T  6045 cttttggtccctgcaatattagcgaattccgattttagtccctgtaaaaaaaaaaagtttagattctgtccctgtaatttcagattcctccact 5952  T

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Target: scaffold0352; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 4679 - 4771
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||| ||||||||||| |||| |||||||||||| ||||| ||||| |||||||| ||||| | ||||||||||||||||||||    
T  4679 cttttagtccctgcaatattagcgaattccagttttagtccctataaaaaaaaaagtttagattctgtccctgtaatttcagattcctccact 4771  T

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Target: scaffold0157 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 280 - 174
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaa--tttagattatgtccttataatttcagattc 429  Q
    ||||| |||| |||||| |||||| |||||||||||| |||| |||||||||||| | ||| ||||||  |||||||| ||||| |||||||||||||||    
T  280 gggttcataccacttttagtccctataatattagcgaattccagttttagtccctattaaaaaaaaaaagtttagattttgtccctataatttcagattc 181  T
Q  430 ctccact 436  Q
    |||||||    
T  180 ctccact 174  T

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Target: scaffold0449 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 429
Target Start/End: Complemental strand, 7565 - 7480
Alignment:
Q  345 ttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattc 429  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||| ||||| | |||||||||||||    
T  7565 ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 7480  T

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Target: scaffold0449; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 344 - 450
Target Start/End: Original strand, 7238 - 7344
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccactgtcagtc 443  Q
    ||||| |||| |||||||||||||| ||| ||| ||||| ||| ||||| |||| ||||||||| ||||| | |||||||| |||| |||||| || |||    
T  7238 cttttcgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccactttcggtc 7337  T
Q  444 catcatt 450  Q
    | |||||    
T  7338 cctcatt 7344  T

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Target: scaffold0141 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 8700 - 8596
Alignment:
Q  332 gggttaatactacttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcct 431  Q
    |||| |||||| ||||| || |||| ||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| | |||||| |||||| |    
T  8700 gggtaaatactgctttttgttcctgcaatattagcgaattccggttttagtccctttaaaaaaaaagatttagattttgtccctgtaattttagattctt 8601  T
Q  432 ccact 436  Q
    |||||    
T  8600 ccact 8596  T

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Target: scaffold0141; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 8337 - 8406
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtcc 413  Q
    ||||| ||||||||||||||||||| || |||||||||||||  ||||  |||| ||||||||| |||||    
T  8337 cttttcgtccctgtaatattagcgaatttcggttttagtccccgtaaataaaaagatttagattttgtcc 8406  T

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Target: scaffold0809 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 1772 - 1684
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||| ||    |||||| ||||||||||||||| ||||||||||||| ||||||    
T  1772 cttttcgtccctgtaatattaacgaattccggttttagtccctata----aaaaaaattagattatgtccttgtaatttcagattcttccact 1684  T

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Target: scaffold0809; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 436
Target Start/End: Original strand, 1435 - 1514
Alignment:
Q  356 gtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    |||||||| |||| || || ||||||||||| ||||| |||| ||||||||||||||| | ||||||||||||| ||||||    
T  1435 gtaatatttgcgaatttcgattttagtccctgtaaaa-aaaagatttagattatgtccctgtaatttcagattcttccact 1514  T

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Target: scaffold0361 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 4928 - 4837
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| ||||||||||||||||| | ||||||||||| ||||| ||||| | || ||||||||| ||||||| |||||||| |||| ||||||    
T  4928 cttttcgtccctgtaatattagcaaattccggttttaatccctgtaaaa-ataagatttagattttgtccttgtaatttcatattcttccact 4837  T

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Target: scaffold0361; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 429
Target Start/End: Original strand, 4574 - 4660
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattc 429  Q
    ||||| |||| |||||||||||||| ||||| ||||||||||| ||||| ||||| ||||| ||| ||||| | |||||| ||||||    
T  4574 cttttcgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttgagattc 4660  T

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Target: scaffold0176 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 399
Target Start/End: Complemental strand, 15994 - 15939
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaa 399  Q
    ||||| |||| |||||||||||||| |||||||||||||| || ||||| ||||||    
T  15994 cttttcgtccatgtaatattagcgaattccggttttagtctctgtaaaaaaaaaaa 15939  T

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Target: scaffold0881 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 231 - 324
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaa-atttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||||||||| |||||||| ||| |||||||||  |  ||||| ||||| ||||||||| | |||  |||||||||||||| ||||||    
T  231 ctttttgtccctgtaaaattagcgaattctggttttagtttccgtaaaaaaaaaagatttagattttctccccataatttcagattcttccact 324  T

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Target: scaffold0881; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 407
Target Start/End: Complemental strand, 569 - 520
Alignment:
Q  358 aatattagcgatttccggttttagtccctctaaaataaaaaatttagatt 407  Q
    ||||||| ||| ||||||||||| ||||| |||||||||| |||||||||    
T  569 aatattaacgaattccggttttactccctgtaaaataaaagatttagatt 520  T

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Target: scaffold0477 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 5113 - 5022
Alignment:
Q  344 cttttggtccctgtaatattagcgatttccggttttagtccctctaaaataaaaaatttagattatgtccttataatttcagattcctccact 436  Q
    ||||| |||| |||||||||||||| |||||||||| ||||   ||||| |||| |||||||||  |||| | |||||| |||||| ||||||    
T  5113 cttttcgtccatgtaatattagcgaattccggtttttgtcctagtaaaa-aaaatatttagatttagtccctgtaattttagattcttccact 5022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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