View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1318_low_4 (Length: 723)

Name: NF1318_low_4
Description: NF1318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1318_low_4
NF1318_low_4
[»] chr1 (40 HSPs)
chr1 (420-720)||(17898451-17898751)
chr1 (276-339)||(49251402-49251465)
chr1 (279-339)||(29491495-29491555)
chr1 (275-342)||(17889083-17889150)
chr1 (241-339)||(11405481-11405573)
chr1 (241-339)||(15774290-15774382)
chr1 (275-339)||(15368830-15368894)
chr1 (279-339)||(17350086-17350146)
chr1 (275-339)||(19793551-19793615)
chr1 (275-339)||(21884600-21884664)
chr1 (275-339)||(23463992-23464056)
chr1 (275-339)||(24662007-24662071)
chr1 (279-339)||(52833116-52833176)
chr1 (280-339)||(2208649-2208708)
chr1 (276-339)||(4354112-4354175)
chr1 (283-338)||(40454185-40454240)
chr1 (283-339)||(17056894-17056950)
chr1 (276-336)||(30649121-30649181)
chr1 (275-339)||(32711150-32711213)
chr1 (275-339)||(37733780-37733844)
chr1 (279-339)||(38021277-38021337)
chr1 (279-339)||(39238741-39238801)
chr1 (279-339)||(40678848-40678908)
chr1 (283-335)||(41677089-41677141)
chr1 (286-342)||(43092175-43092231)
chr1 (279-339)||(47763395-47763455)
chr1 (283-338)||(2643829-2643884)
chr1 (283-338)||(9768823-9768878)
chr1 (283-342)||(19424069-19424127)
chr1 (276-339)||(27745182-27745245)
chr1 (273-339)||(538333-538399)
chr1 (273-339)||(749591-749656)
chr1 (284-342)||(8261691-8261748)
chr1 (284-338)||(11238043-11238097)
chr1 (305-339)||(23930580-23930614)
chr1 (305-342)||(5680734-5680771)
chr1 (278-339)||(18309573-18309634)
chr1 (285-342)||(24253659-24253715)
chr1 (306-339)||(40814803-40814836)
chr1 (285-338)||(42908797-42908850)
[»] chr3 (38 HSPs)
chr3 (273-338)||(16277955-16278020)
chr3 (275-339)||(49146109-49146173)
chr3 (279-339)||(36331736-36331796)
chr3 (275-339)||(43566802-43566866)
chr3 (275-339)||(43774210-43774274)
chr3 (279-342)||(24559411-24559474)
chr3 (275-342)||(32508800-32508867)
chr3 (281-339)||(7448375-7448433)
chr3 (281-339)||(7456517-7456575)
chr3 (269-339)||(35483294-35483364)
chr3 (275-339)||(362968-363032)
chr3 (275-339)||(8475440-8475504)
chr3 (279-339)||(9625008-9625068)
chr3 (275-339)||(13874840-13874904)
chr3 (279-339)||(27183691-27183751)
chr3 (275-335)||(37279656-37279716)
chr3 (275-339)||(42271019-42271083)
chr3 (283-342)||(32665303-32665362)
chr3 (275-342)||(53870856-53870923)
chr3 (284-338)||(4478383-4478437)
chr3 (284-338)||(34407105-34407159)
chr3 (275-339)||(9167277-9167341)
chr3 (279-339)||(14868710-14868770)
chr3 (275-339)||(23820654-23820718)
chr3 (275-339)||(33206782-33206846)
chr3 (275-339)||(40786305-40786369)
chr3 (279-339)||(43598824-43598883)
chr3 (275-339)||(45713505-45713569)
chr3 (279-339)||(52030146-52030206)
chr3 (283-338)||(23237388-23237443)
chr3 (284-339)||(29507242-29507297)
chr3 (279-337)||(22854622-22854680)
chr3 (304-338)||(26583127-26583161)
chr3 (305-339)||(54507377-54507411)
chr3 (278-335)||(27066639-27066696)
chr3 (306-335)||(38682295-38682324)
chr3 (275-328)||(48347278-48347331)
chr3 (275-339)||(53472649-53472714)
[»] chr2 (39 HSPs)
chr2 (275-339)||(16028114-16028178)
chr2 (279-342)||(44187726-44187789)
chr2 (276-339)||(10262764-10262827)
chr2 (287-342)||(25050258-25050313)
chr2 (279-338)||(37123212-37123271)
chr2 (275-339)||(19052617-19052681)
chr2 (279-339)||(32527087-32527147)
chr2 (273-339)||(580787-580853)
chr2 (280-338)||(39334892-39334950)
chr2 (269-339)||(44422132-44422202)
chr2 (275-339)||(3179349-3179413)
chr2 (275-339)||(9796922-9796986)
chr2 (286-338)||(11001750-11001802)
chr2 (275-339)||(11133101-11133165)
chr2 (275-339)||(17154674-17154738)
chr2 (275-339)||(17239926-17239990)
chr2 (275-339)||(19905661-19905725)
chr2 (279-339)||(29035001-29035061)
chr2 (275-339)||(30474201-30474265)
chr2 (294-341)||(12183760-12183806)
chr2 (276-339)||(27495563-27495626)
chr2 (280-338)||(4529774-4529832)
chr2 (273-339)||(11190103-11190169)
chr2 (273-339)||(18386816-18386882)
chr2 (273-339)||(32891306-32891372)
chr2 (305-338)||(917327-917360)
chr2 (275-339)||(3037628-3037692)
chr2 (275-339)||(7086278-7086342)
chr2 (283-339)||(36520794-36520850)
chr2 (275-339)||(36665455-36665519)
chr2 (275-339)||(44721710-44721774)
chr2 (283-342)||(41699124-41699183)
chr2 (269-335)||(20533786-20533852)
chr2 (305-339)||(24034089-24034123)
chr2 (273-339)||(30811836-30811902)
chr2 (286-339)||(9802917-9802970)
chr2 (273-342)||(10207667-10207736)
chr2 (283-324)||(32256176-32256217)
chr2 (297-338)||(44132591-44132632)
[»] chr8 (41 HSPs)
chr8 (278-342)||(27558880-27558943)
chr8 (279-339)||(35301173-35301233)
chr8 (275-339)||(9524982-9525046)
chr8 (275-339)||(24608489-24608553)
chr8 (275-342)||(27822092-27822159)
chr8 (294-339)||(4293908-4293953)
chr8 (279-339)||(2696558-2696618)
chr8 (279-339)||(2800044-2800104)
chr8 (275-339)||(10199748-10199812)
chr8 (275-339)||(13702358-13702422)
chr8 (275-339)||(14683902-14683965)
chr8 (275-339)||(15042371-15042435)
chr8 (275-335)||(33982219-33982279)
chr8 (275-339)||(42761871-42761935)
chr8 (283-342)||(4798555-4798614)
chr8 (283-338)||(7345454-7345509)
chr8 (284-339)||(25139902-25139957)
chr8 (279-339)||(38790582-38790643)
chr8 (279-339)||(1588792-1588852)
chr8 (275-339)||(7540494-7540558)
chr8 (275-339)||(13537317-13537381)
chr8 (275-339)||(13626865-13626929)
chr8 (275-339)||(14012637-14012701)
chr8 (279-339)||(17110329-17110388)
chr8 (283-339)||(25119233-25119289)
chr8 (275-339)||(42688081-42688145)
chr8 (305-344)||(5323942-5323981)
chr8 (279-338)||(13654837-13654896)
chr8 (279-338)||(13713479-13713538)
chr8 (275-342)||(17987455-17987522)
chr8 (275-342)||(34073245-34073312)
chr8 (283-338)||(44254326-44254381)
chr8 (273-339)||(1032965-1033030)
chr8 (305-339)||(6064402-6064436)
chr8 (297-339)||(21133547-21133589)
chr8 (273-342)||(40329608-40329678)
chr8 (305-342)||(6978842-6978879)
chr8 (273-342)||(10970288-10970357)
chr8 (298-339)||(30199719-30199760)
chr8 (273-339)||(40249882-40249950)
chr8 (286-335)||(42711189-42711238)
[»] chr7 (36 HSPs)
chr7 (275-339)||(2366382-2366446)
chr7 (275-342)||(4042274-4042341)
chr7 (275-339)||(31694095-31694159)
chr7 (273-339)||(21086129-21086195)
chr7 (279-337)||(41417285-41417343)
chr7 (269-342)||(924292-924365)
chr7 (275-339)||(2261490-2261554)
chr7 (275-339)||(22965964-22966028)
chr7 (283-339)||(23685568-23685624)
chr7 (279-339)||(24304293-24304353)
chr7 (275-339)||(30644194-30644258)
chr7 (279-338)||(47355835-47355894)
chr7 (279-337)||(14818375-14818433)
chr7 (279-337)||(15265373-15265431)
chr7 (280-338)||(16814723-16814781)
chr7 (276-342)||(25711138-25711204)
chr7 (277-342)||(36315982-36316047)
chr7 (275-339)||(5787486-5787550)
chr7 (279-339)||(20947786-20947846)
chr7 (275-339)||(21285359-21285423)
chr7 (279-339)||(24396970-24397030)
chr7 (275-339)||(29658278-29658342)
chr7 (302-342)||(29779003-29779043)
chr7 (275-339)||(47552238-47552302)
chr7 (279-338)||(5180701-5180760)
chr7 (275-342)||(8724402-8724469)
chr7 (283-338)||(11808064-11808119)
chr7 (275-338)||(14102487-14102550)
chr7 (275-338)||(14412504-14412567)
chr7 (279-338)||(23799326-23799385)
chr7 (283-338)||(24579300-24579355)
chr7 (279-342)||(37449520-37449583)
chr7 (281-339)||(15912800-15912857)
chr7 (273-339)||(30152766-30152832)
chr7 (279-337)||(31475850-31475908)
chr7 (306-339)||(41139112-41139145)
[»] chr4 (55 HSPs)
chr4 (275-339)||(37032185-37032249)
chr4 (275-342)||(22158269-22158336)
chr4 (279-339)||(8690239-8690299)
chr4 (279-339)||(52031232-52031292)
chr4 (279-342)||(9692984-9693047)
chr4 (273-339)||(10098150-10098216)
chr4 (273-339)||(50657905-50657971)
chr4 (279-339)||(11872898-11872958)
chr4 (279-339)||(14149818-14149878)
chr4 (279-339)||(28520741-28520801)
chr4 (279-339)||(36954162-36954222)
chr4 (275-339)||(47017952-47018016)
chr4 (279-339)||(48968220-48968280)
chr4 (241-342)||(53291464-53291559)
chr4 (279-339)||(56546459-56546519)
chr4 (279-338)||(11084262-11084321)
chr4 (283-338)||(20610765-20610820)
chr4 (283-338)||(33076556-33076611)
chr4 (269-339)||(9084784-9084854)
chr4 (284-342)||(21476096-21476154)
chr4 (284-338)||(27921922-27921976)
chr4 (273-339)||(31601831-31601897)
chr4 (273-339)||(35451125-35451191)
chr4 (285-338)||(18497418-18497471)
chr4 (275-339)||(548893-548957)
chr4 (275-339)||(3442868-3442932)
chr4 (275-339)||(3465608-3465672)
chr4 (275-339)||(6054005-6054069)
chr4 (279-339)||(15640453-15640513)
chr4 (279-342)||(21200551-21200615)
chr4 (275-339)||(32885713-32885777)
chr4 (275-339)||(34773689-34773753)
chr4 (275-339)||(35747488-35747552)
chr4 (275-339)||(38433336-38433400)
chr4 (279-339)||(40150498-40150558)
chr4 (279-339)||(42411464-42411524)
chr4 (275-339)||(53697986-53698050)
chr4 (276-339)||(43115293-43115356)
chr4 (283-338)||(49319419-49319474)
chr4 (305-335)||(1297882-1297912)
chr4 (284-338)||(1589172-1589226)
chr4 (300-338)||(3465877-3465915)
chr4 (305-339)||(9172407-9172441)
chr4 (269-339)||(13211352-13211422)
chr4 (276-342)||(35112730-35112796)
chr4 (279-329)||(52330919-52330969)
chr4 (283-336)||(9924884-9924937)
chr4 (305-342)||(33944399-33944436)
chr4 (282-339)||(34106627-34106683)
chr4 (297-338)||(37728965-37729006)
chr4 (285-342)||(38690689-38690745)
chr4 (276-337)||(45350303-45350364)
chr4 (276-337)||(45359782-45359843)
chr4 (305-338)||(49743388-49743421)
chr4 (282-339)||(53815721-53815778)
[»] scaffold0039 (1 HSPs)
scaffold0039 (275-342)||(101853-101920)
[»] chr6 (30 HSPs)
chr6 (275-342)||(6025393-6025459)
chr6 (273-339)||(20716396-20716462)
chr6 (279-339)||(9064891-9064951)
chr6 (275-339)||(12127915-12127979)
chr6 (275-335)||(18631501-18631561)
chr6 (275-339)||(21507207-21507271)
chr6 (275-342)||(19417844-19417911)
chr6 (273-339)||(9491739-9491805)
chr6 (269-339)||(26528592-26528662)
chr6 (282-339)||(19642560-19642617)
chr6 (275-339)||(5288351-5288415)
chr6 (279-339)||(6143990-6144049)
chr6 (275-339)||(9438327-9438391)
chr6 (275-339)||(12089122-12089186)
chr6 (279-339)||(14981712-14981772)
chr6 (286-338)||(20696899-20696951)
chr6 (275-339)||(22389756-22389820)
chr6 (275-339)||(23771058-23771122)
chr6 (275-339)||(32057059-32057123)
chr6 (275-339)||(34396108-34396172)
chr6 (275-339)||(35190788-35190852)
chr6 (269-336)||(19279477-19279544)
chr6 (275-338)||(25020534-25020597)
chr6 (305-339)||(10373620-10373654)
chr6 (273-339)||(10377128-10377194)
chr6 (275-337)||(15288961-15289023)
chr6 (269-335)||(16801818-16801884)
chr6 (284-338)||(25064684-25064738)
chr6 (305-339)||(31949861-31949895)
chr6 (285-338)||(30833043-30833096)
[»] chr5 (31 HSPs)
chr5 (279-339)||(4674825-4674885)
chr5 (275-339)||(29144167-29144231)
chr5 (275-339)||(33800918-33800982)
chr5 (279-339)||(36045144-36045204)
chr5 (280-338)||(32252930-32252988)
chr5 (275-336)||(1244733-1244794)
chr5 (279-339)||(1463896-1463956)
chr5 (275-339)||(2029134-2029198)
chr5 (275-339)||(6806646-6806710)
chr5 (279-339)||(10943741-10943801)
chr5 (275-339)||(20945897-20945961)
chr5 (275-343)||(42801447-42801515)
chr5 (275-342)||(8015857-8015924)
chr5 (275-334)||(34921120-34921179)
chr5 (283-338)||(42260734-42260789)
chr5 (273-339)||(42618417-42618483)
chr5 (297-338)||(19608639-19608680)
chr5 (285-338)||(25660938-25660991)
chr5 (279-339)||(6447490-6447550)
chr5 (283-339)||(18872546-18872602)
chr5 (275-339)||(32158420-32158484)
chr5 (275-339)||(33729803-33729867)
chr5 (279-339)||(37303959-37304019)
chr5 (276-339)||(843375-843438)
chr5 (276-339)||(22599943-22600005)
chr5 (283-334)||(24651166-24651217)
chr5 (273-339)||(6614042-6614108)
chr5 (284-338)||(11246509-11246563)
chr5 (269-339)||(29841373-29841443)
chr5 (305-338)||(7147055-7147088)
chr5 (280-337)||(27278765-27278822)
[»] scaffold0178 (2 HSPs)
scaffold0178 (275-335)||(4352-4412)
scaffold0178 (275-339)||(16090-16154)
[»] scaffold1990 (1 HSPs)
scaffold1990 (275-339)||(919-983)
[»] scaffold0308 (1 HSPs)
scaffold0308 (279-339)||(7101-7161)
[»] scaffold0092 (1 HSPs)
scaffold0092 (275-339)||(47323-47387)


Alignment Details
Target: chr1 (Bit Score: 273; Significance: 1e-152; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 420 - 720
Target Start/End: Complemental strand, 17898751 - 17898451
Alignment:
Q  420 tcccgctctatgaataaaccaacccaaatagagaatttgaatttgttctataatatgagatgaatttgctatatcttcaacctaaattaaattctacgtc 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  17898751 tcccgctctatgaataaaccaacccaaatagagaatttgaatttgttctatagcatgagatgaatttgctatatcttcaacctaaattaaattctacgtc 17898652  T
Q  520 cagaaagactttaataacttttttaacacacttcaaattactactgatcaaagcaacaagatataataattgcattgtgacgataatttatcaaaatatt 619  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17898651 cagaaagactttaataacttttttaacacacttcaaattactactgatcaaagcaacaagatataataatttcattgtgacgataatttatcaaaatatt 17898552  T
Q  620 gttctcttttattaaaagatattcatgaaatatgaaacaagatattttgtcccttttatgaggggattcagcaatgggattttcttaatattcttcgaga 719  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||    
T  17898551 gttctcttttattaaaagatattcatgaaatatgaaacaggatattttgtcccttttatgaggcgattcagcaatgggattttcttaatatttttagaga 17898452  T
Q  720 t 720  Q
    |    
T  17898451 t 17898451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 49251402 - 49251465
Alignment:
Q  276 ttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||| |||||||||| || ||||||| ||||||| |||||||||||||||||||||||||||    
T  49251402 ttataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataataatgcatt 49251465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 29491555 - 29491495
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||||||||||||||||||||||||||    
T  29491555 taaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcatt 29491495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 17889150 - 17889083
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||| |||||||||| ||||||| |||||||||| |||||  ||||||||||||||| |||||||    
T  17889150 cttataaggtgaataagtgggatgtccggagttcgaaccccgattcctgcatataataatacattatc 17889083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 339
Target Start/End: Complemental strand, 11405573 - 11405481
Alignment:
Q  241 gtcaggtagcttagtg-ctagaattcactatttatcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||||| |||||||||||       ||||||| |||||||||| || |||| || ||||||| |||||||||||||||||| ||||||||    
T  11405573 gtcaggtagcttagtggctagaattcac-------cttataaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatt 11405481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 339
Target Start/End: Original strand, 15774290 - 15774382
Alignment:
Q  241 gtcaggtagcttagtg-ctagaattcactatttatcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||||| |||||||||||       ||||||| |||||||||| || |||| || ||||||| |||||||||| ||||||||||||||||    
T  15774290 gtcaggtagcttagtggctagaattcac-------cttataaggtgaataagtggggtgtccggggttcgaaccccgacccctacatataataatgcatt 15774382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 15368894 - 15368830
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||| ||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  15368894 cttataaaatgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 15368830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 17350146 - 17350086
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  17350146 taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 17350086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 19793615 - 19793551
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || |||||||| ||| ||||||||||||||||||||||    
T  19793615 cttataaggtgaataagtggggtgtccggggttcgaattccggcccctgcatataataatgcatt 19793551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 21884664 - 21884600
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||| ||||||| | || ||||||||||||||||||||||    
T  21884664 cttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataataatgcatt 21884600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 23463992 - 23464056
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||||||| |||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  23463992 cttataaagtgaacaagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 23464056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 24662071 - 24662007
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||  ||||||| | || ||||||| |||||||||| ||||||||||||||||||||||||    
T  24662071 cttataagttgaataaatggggtgtctggggttcgaatcctgacccctgcatataataatgcatt 24662007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 52833116 - 52833176
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||| | ||||||| || ||||||| |||| ||||||||||||||||||||||    
T  52833116 taaagtgaataaatgggatgtccggggttcgaaccccggcccctgcatataataatgcatt 52833176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 2208649 - 2208708
Alignment:
Q  280 aaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||||||| |||||||||| ||| ||| | || ||||||||||||||||||||||    
T  2208649 aaagtgaataagtgggatgtctggggtttgaacctcgtcccctgcatataataatgcatt 2208708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 4354112 - 4354175
Alignment:
Q  276 ttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||| |||||||||| || |||| | |||||||| |||| ||||||||||||||||||||||    
T  4354112 ttataaggtgaataagtggggtgtccgaagttcgaaccccggcccctgcatataataatgcatt 4354175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 40454185 - 40454240
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||||||||| |||| |||||||||| |||| ||| |||||||||||||||||    
T  40454185 gtgaataagttgggtgtccggagttcgaaccccggcccttgcatataataatgcat 40454240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 17056894 - 17056950
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||| ||  |||||| ||||||| |||| ||||||||||||||||||||||    
T  17056894 gtgaataagtggggcgtctggggttcgaaccccggcccctgcatataataatgcatt 17056950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 30649181 - 30649121
Alignment:
Q  276 ttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgc 336  Q
    |||||| |||||||||| || ||||||| ||||||| ||| || |||||||||||||||||    
T  30649181 ttataaggtgaataagtggggtgtctggggttcgaaccccaactcctgcatataataatgc 30649121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 32711150 - 32711213
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||| ||||||| |||| ||| ||||||||||||||||||    
T  32711150 cttataaggtgaataagtggggtgtctggggttcgaaccccggccc-tgcatataataatgcatt 32711213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 37733844 - 37733780
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || ||||||| |||| || |||||||||||||||||||    
T  37733844 cttataaggtgaataagtggggtgtccggggttcgaaccccgtccactgcatataataatgcatt 37733780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 38021337 - 38021277
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || |||||||  ||| ||||||||||||||||||||||    
T  38021337 taaagtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcatt 38021277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 39238801 - 39238741
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| | || ||||||||||||||||||||||    
T  39238801 taaagtgaataagtggggtgtccggggttcgaacctcggcccctgcatataataatgcatt 39238741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 40678908 - 40678848
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || | ||||| |||| ||||||||||||||||||||||    
T  40678908 taaagtgaataagtggggtgtccggggatcgaaccccggcccctgcatataataatgcatt 40678848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 41677141 - 41677089
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatg 335  Q
    |||||||||| || |||| |||||||||| ||||||||| |||||||||||||    
T  41677141 gtgaataagtggggtgtccggagttcgaaccccgacccccgcatataataatg 41677089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 43092231 - 43092175
Alignment:
Q  286 aataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||||||||| |||| |  ||||||| ||||||||||||||||||||||| ||||||    
T  43092231 aataagttgggtgtccgaggttcgaaccccgacccctgcatataataatgtattatc 43092175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 47763395 - 47763455
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| ||||||| |  |||||||  ||| ||||||||||||||||||||||    
T  47763395 taaagtgaataagtgggatgtccgaggttcgaactccggcccctgcatataataatgcatt 47763455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 2643829 - 2643884
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||| || ||||||| |||| || |||||||| |||||||||||||||||    
T  2643829 gtgaataagtggggtgtctggggttcaaaccccgacccatgcatataataatgcat 2643884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 9768823 - 9768878
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||| || |||| || ||||||| |||||||||||||||||| |||||||    
T  9768823 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcat 9768878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 19424127 - 19424069
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||||||||| || |||| || ||||||| ||||||||||||||||||| ||||||||||    
T  19424127 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataat-atgcattatc 19424069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 27745245 - 27745182
Alignment:
Q  276 ttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||| |||||||| | || |||| || ||||||| ||||| |||||||||||||||||||||    
T  27745245 ttataaggtgaataaatggggtgtccggggttcgaaccccgatccctgcatataataatgcatt 27745182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 538333 - 538399
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| |||||||||| || |||  || |||||||  ||| ||||||||||||||||||||||    
T  538333 atcttataaggtgaataagtggggtgttcggggttcgaactccggcccctgcatataataatgcatt 538399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 749591 - 749656
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| |||||||||| || |||| || ||||||| ||| |||||| ||||||||||||||||    
T  749591 atcttataaggtgaataagtggggtgtcggg-gttcgaaccccaacccctacatataataatgcatt 749656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 8261691 - 8261748
Alignment:
Q  284 tgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||||| || |||||||  || ||| ||||||||||||||||||||||||||||||    
T  8261691 tgaataagtggg-tgtctgggattggaaccccgacccctgcatataataatgcattatc 8261748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 11238043 - 11238097
Alignment:
Q  284 tgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||||| || |||| ||  |||||| ||||||||||||||||||||||||||    
T  11238043 tgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatgcat 11238097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 23930580 - 23930614
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||||||||||||||||||||    
T  23930580 gttcgaaccccgacccctgcatataataatgcatt 23930614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 5680771 - 5680734
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  5680771 gttcgaaccccgacccctacatataataatgcattatc 5680734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 278 - 339
Target Start/End: Complemental strand, 18309634 - 18309573
Alignment:
Q  278 ataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||||||||| ||||||| ||  ||| ||  || |||||||||||||||||||||||    
T  18309634 ataaagtgaataagtaggatgtccgggattctaactccaacccctgcatataataatgcatt 18309573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 24253659 - 24253715
Alignment:
Q  285 gaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||||  ||||||||  ||||||||||||||||||||||| ||| ||||||||||    
T  24253659 gaataagtaagatgtctgaggttcgaatcccgacccctgcata-aattatgcattatc 24253715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 40814803 - 40814836
Alignment:
Q  306 ttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||| |||||||||||||||||||||||||||    
T  40814803 ttcgaaccccgacccctgcatataataatgcatt 40814836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 42908850 - 42908797
Alignment:
Q  285 gaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||| || | || |||||||||| |||||||||||||||||| |||||||    
T  42908850 gaataagtggggtatccggagttcgaaccccgacccctgcatataacaatgcat 42908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 1e-21; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 16277955 - 16278020
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  16277955 atcttataaggtgaataagtgggatgtccggagttcgaatcccgacccctgcatataataatgcat 16278020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 49146173 - 49146109
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||||||| || |||| || ||||||| |||||||||||||||||||||||||||    
T  49146173 cttataaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcatt 49146109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 36331736 - 36331796
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||||||||||||||||||||||||||    
T  36331736 taaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcatt 36331796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 43566802 - 43566866
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||  ||||||| |||||||||||||||||||||||||||    
T  43566802 cttataaggtgaataagtggggtgtctgaggttcgaaccccgacccctgcatataataatgcatt 43566866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 43774274 - 43774210
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||| ||||||| |||||||||||||||||| ||||||||    
T  43774274 cttataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataacaatgcatt 43774210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 24559474 - 24559411
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||||||||||||| || |||| || ||||||| ||||||||||||||||||| ||||||||||    
T  24559474 taaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataattatgcattatc 24559411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 275 - 342
Target Start/End: Original strand, 32508800 - 32508867
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||| |||||||||| || |||  || ||||||| ||||||||||||||||||||||||||||||    
T  32508800 cttataaggtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcattatc 32508867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 281 - 339
Target Start/End: Original strand, 7448375 - 7448433
Alignment:
Q  281 aagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||| || | ||||| |||||||||||| ||||||||||||||||||||||    
T  7448375 aagtgaataagtggggtatctggggttcgaatcccggcccctgcatataataatgcatt 7448433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 281 - 339
Target Start/End: Original strand, 7456517 - 7456575
Alignment:
Q  281 aagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||| || | ||||| |||||||||||| ||||||||||||||||||||||    
T  7456517 aagtgaataagtggggtatctggggttcgaatcccggcccctgcatataataatgcatt 7456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 269 - 339
Target Start/End: Complemental strand, 35483364 - 35483294
Alignment:
Q  269 atttatcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||| ||||||| |||||||||| || |||| ||  |||||| |||||||||||||||||||||||||||    
T  35483364 atttaccttataaggtgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatgcatt 35483294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 363032 - 362968
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||||||| || | || || |||||||  ||||||||||||||||||||||||||    
T  363032 cttataaagtgaataagtggggtatccggggttcgaactccgacccctgcatataataatgcatt 362968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 8475504 - 8475440
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||| ||||||||||||||||||||  ||| || ||||||| |||||||| ||||||||||    
T  8475504 cttataaactgaataagttggatgtctgggattcaaaccccgacctctgcatatcataatgcatt 8475440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 9625068 - 9625008
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  9625068 taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 9625008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 13874840 - 13874904
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||| | ||||||||||  || ||| |||||||||||||||||||||||||||    
T  13874840 cttataaggtgaataaatgggatgtctgggatttgaaccccgacccctgcatataataatgcatt 13874904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 27183691 - 27183751
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  27183691 taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 27183751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 37279716 - 37279656
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatg 335  Q
    ||||||| |||||||||| || ||||||||||||||| ||| ||| |||||||||||||||    
T  37279716 cttataaggtgaataagtggggtgtctggagttcgaaccccaacctctgcatataataatg 37279656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 42271019 - 42271083
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| |||||||||| |||| ||||||||||||| ||||||||    
T  42271019 cttataaggtgaataagtagggtgtccggagttcgaaccccggcccctgcatataacaatgcatt 42271083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 32665362 - 32665303
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||||||||| || |||| |||||| ||| |||||||| |||||||||||||||||||||    
T  32665362 gtgaataagtggggtgtccggagtttgaaccccgacccttgcatataataatgcattatc 32665303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 53870923 - 53870856
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||| |||||||||| || |||| ||||||| ||| |||| |||||||||| |||||||||||||    
T  53870923 cttataatgtgaataagtggggtgtccggagttctaattccgatccctgcatatcataatgcattatc 53870856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 4478383 - 4478437
Alignment:
Q  284 tgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||||| ||||||| ||  |||||| ||||||||||||||||||||||||||    
T  4478383 tgaataagtgggatgtccgggattcgaaccccgacccctgcatataataatgcat 4478437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 34407105 - 34407159
Alignment:
Q  284 tgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||||| || ||||||| ||||||| ||| ||||||||||||||||||||||    
T  34407105 tgaataagtggggtgtctggggttcgaaccccaacccctgcatataataatgcat 34407159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 9167277 - 9167341
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||| | || |||| | |||||||| |||||||||||||||||||||| ||||    
T  9167277 cttataaggtgaataactggggtgtccgaagttcgaaccccgacccctgcatataataatacatt 9167341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 14868770 - 14868710
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||  || ||||||| |||| ||||||||||||||||||||||    
T  14868770 taaagtgaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcatt 14868710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 23820718 - 23820654
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||  ||||||||| || ||||||| |||||||  ||| ||||||||||||||||||||||    
T  23820718 cttataagatgaataagtggggtgtctggggttcgaactccggcccctgcatataataatgcatt 23820654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 33206846 - 33206782
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || ||||||| |||  ||||||||||||||||||||||    
T  33206846 cttataaggtgaataagtggggtgtccggggttcgaaccccagcccctgcatataataatgcatt 33206782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 40786369 - 40786305
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| |||||||| ||  |||||  ||||||| |||||||| ||||||||||||||||||    
T  40786369 cttataaagagaataagtggggcgtctgaggttcgaaccccgacccatgcatataataatgcatt 40786305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 43598883 - 43598824
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || ||| | ||||||||| ||||||| |||||||||||||||||||    
T  43598883 taaagtgaataagtggggtgt-tcgagttcgaaccccgacctctgcatataataatgcatt 43598824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 45713569 - 45713505
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| ||||||||||  ||| ||||| ||||||||||||||||    
T  45713569 cttataaggtgaataagtggggtgtccggagttcgaactccggcccctacatataataatgcatt 45713505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 52030206 - 52030146
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||| ||||||||||||||||| ||||    
T  52030206 taaagtgaataagtagggtgtccggggttcgaaccccggcccctgcatataataatacatt 52030146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 23237443 - 23237388
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||| || ||||||| ||||||||||  ||||||||| |||||||||||||||    
T  23237443 gtgaatatgtgggatgtccggagttcgaactccgacccctacatataataatgcat 23237388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 29507297 - 29507242
Alignment:
Q  284 tgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| | |||||||||||||||| | | || ||||||||||||||||||||    
T  29507297 tgaataagtggaatgtctggagttcgaaccacaactcctgcatataataatgcatt 29507242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 22854680 - 22854622
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgca 337  Q
    |||||||||||| | |||||| ||| ||| |||  ||||||||||||||||||||||||    
T  22854680 taaagtgaataaatgggatgtttggggtttgaagtccgacccctgcatataataatgca 22854622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 304 - 338
Target Start/End: Complemental strand, 26583161 - 26583127
Alignment:
Q  304 agttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||| ||||||||||||||||||||||||||    
T  26583161 agttcgaaccccgacccctgcatataataatgcat 26583127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 54507411 - 54507377
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||||||| ||||||||||||||||    
T  54507411 gttcgaatcccgacccctacatataataatgcatt 54507377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 278 - 335
Target Start/End: Complemental strand, 27066696 - 27066639
Alignment:
Q  278 ataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatg 335  Q
    |||| |||||||||| || |||| || ||||||| || ||||||||||||||||||||    
T  27066696 ataaggtgaataagtggggtgtccggggttcgaaccctgacccctgcatataataatg 27066639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 335
Target Start/End: Original strand, 38682295 - 38682324
Alignment:
Q  306 ttcgaatcccgacccctgcatataataatg 335  Q
    ||||||||||||||||||||||||||||||    
T  38682295 ttcgaatcccgacccctgcatataataatg 38682324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 48347278 - 48347331
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatat 328  Q
    |||||||| ||||||||| || ||||||  ||||||| ||||||||||||||||    
T  48347278 cttataaaatgaataagtggggtgtctgaggttcgaaccccgacccctgcatat 48347331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 53472714 - 53472649
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccga-cccctgcatataataatgcatt 339  Q
    |||||||||||||||||| || ||| |||||||| || ||||| || || ||||||||||||||||    
T  53472714 cttataaagtgaataagtggggtgtttggagttcaaaccccgatcctctccatataataatgcatt 53472649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 5e-21; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 16028114 - 16028178
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||    
T  16028114 cttataaagtgaataagtgggatgtctggagttcgaaccccgaccactgcatataataatgcatt 16028178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 44187789 - 44187726
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  44187789 taaagtgaataagtggggtgtctggggttcgaaccccgacccctgcatataataatgcattatc 44187726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 10262827 - 10262764
Alignment:
Q  276 ttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||| |||||||||| || ||||||| ||||||| |||||||||||||||||||||||||||    
T  10262827 ttataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataataatgcatt 10262764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 25050258 - 25050313
Alignment:
Q  287 ataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||    
T  25050258 ataagttgtgtgtctggggttcgaatcccgacccctgcatataataatgcattatc 25050313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 37123271 - 37123212
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||||||| || |||| |||||||||||| ||||||||||||||||||||||||    
T  37123271 taaagtgaataagtagggtgtccggagttcgaatctcgacccctgcatataataatgcat 37123212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 19052617 - 19052681
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||  ||||||||| ||||||| || |||||||||| ||||||||||||||||||||||||    
T  19052617 cttataagatgaataagtgggatgtccggggttcgaatcctgacccctgcatataataatgcatt 19052681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 32527087 - 32527147
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || ||||||| ||||||| |||| ||||||||||||||||||||||    
T  32527087 taaagtgaataagtgggttgtctggggttcgaaccccggcccctgcatataataatgcatt 32527147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 580787 - 580853
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| |||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  580787 atcttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 580853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 280 - 338
Target Start/End: Original strand, 39334892 - 39334950
Alignment:
Q  280 aaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||||||||| |||||||||||||||||| |||  |||||| ||||||||||||||    
T  39334892 aaagtgaataagtgggatgtctggagttcgaaccccagcccctgtatataataatgcat 39334950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 269 - 339
Target Start/End: Complemental strand, 44422202 - 44422132
Alignment:
Q  269 atttatcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||| |||||||||||||||||| || |||| || |||||||  |||| |||||||||||||||||||||    
T  44422202 atttaccttataaagtgaataagtggggtgtccggggttcgaactccgatccctgcatataataatgcatt 44422132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 3179413 - 3179349
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||  ||||||| | |||||||||||||||||||||||||    
T  3179413 cttataaggtgaataagtggggtgtctgaggttcgaacctcgacccctgcatataataatgcatt 3179349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 9796986 - 9796922
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||  ||||||||| || |||| || ||||||| |||||||||||||||||||||||||||    
T  9796986 cttataagatgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcatt 9796922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 11001750 - 11001802
Alignment:
Q  286 aataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||| |||| | |||||||||||||||| ||||||||||||||||||    
T  11001750 aataagttgggtgtccgaagttcgaatcccgacctctgcatataataatgcat 11001802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 11133165 - 11133101
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || ||||||| |||||||||||||||||| ||||||||    
T  11133165 cttataaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatt 11133101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 17154738 - 17154674
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  17154738 cttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 17154674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 17239990 - 17239926
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||  ||||||||| || |||| |  |||||||||||||||||||||||||||||||||||    
T  17239990 cttataagatgaataagtggggtgtccgaggttcgaatcccgacccctgcatataataatgcatt 17239926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 19905661 - 19905725
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || ||||||| ||||||||||| |||||||||||||||    
T  19905661 cttataaggtgaataagtcgggtgtccggggttcgaaccccgacccctgtatataataatgcatt 19905725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 29035061 - 29035001
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  29035061 taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 29035001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 30474201 - 30474265
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||| ||||||| | || ||||||||||||||||||||||    
T  30474201 cttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataataatgcatt 30474265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 12183760 - 12183806
Alignment:
Q  294 ggatgtctggagttcgaatcccgacccctgcatataataatgcattat 341  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  12183760 ggatgtctggagttcgaatcccgacccctgcata-cataatgcattat 12183806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 27495626 - 27495563
Alignment:
Q  276 ttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| ||||||| ||||||  || ||||||||| | |||||||||||||||||||||||    
T  27495626 ttataaagtaaataagtaggatgttcggggttcgaatctcaacccctgcatataataatgcatt 27495563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 338
Target Start/End: Original strand, 4529774 - 4529832
Alignment:
Q  280 aaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||||||||| || |||  ||||||||||  |||||||||||||||||||||||||    
T  4529774 aaagtgaataagtggggtgttcggagttcgaactccgacccctgcatataataatgcat 4529832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 11190103 - 11190169
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| |||||||||| || |||||||| || ||| |||| | ||||||||||||||||||||    
T  11190103 atcttataaggtgaataagtagggtgtctggaatttgaaccccggctcctgcatataataatgcatt 11190169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 18386816 - 18386882
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| |||||||||| || |||| |||||||||| |||  ||||| ||||||||||||||||    
T  18386816 atcttataaggtgaataagtggggtgtccggagttcgaaccccagcccctacatataataatgcatt 18386882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 32891372 - 32891306
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||  ||||||||| || |||| || |||||||  ||||||||||||||||||||||||||    
T  32891372 atcttataagatgaataagtggggtgtccggggttcgaaaaccgacccctgcatataataatgcatt 32891306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 305 - 338
Target Start/End: Original strand, 917327 - 917360
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||||||||||||||||||||||||||||||    
T  917327 gttcgaatcccgacccctgcatataataatgcat 917360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 3037628 - 3037692
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || ||||||| |||| ||||||||||||| ||||||||    
T  3037628 cttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcatt 3037692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 7086342 - 7086278
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||| | || |||  || |||||||||||| ||||||||||||||||||||||    
T  7086342 cttataaggtgaataattggggtgttcggggttcgaatcccggcccctgcatataataatgcatt 7086278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 36520794 - 36520850
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||| || |||| || ||||||| |||||||||| ||||||||||||||||    
T  36520794 gtgaataagtggggtgtccggggttcgaaccccgacccctacatataataatgcatt 36520850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 36665519 - 36665455
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||| ||||||||| || |||| |  ||||||| |||| ||||||||||||||||||||||    
T  36665519 cttataaaatgaataagtggggtgtccgaggttcgaaccccggcccctgcatataataatgcatt 36665455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 44721710 - 44721774
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||| | || |||| |  ||||||| |||||||||||||||||||||||||||    
T  44721710 cttataaggtgaataaatggggtgtccgaggttcgaaccccgacccctgcatataataatgcatt 44721774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 41699183 - 41699124
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||||||||| || |||  || ||||||| ||||||||||||||||||||||||| ||||    
T  41699183 gtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcaatatc 41699124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 20533852 - 20533786
Alignment:
Q  269 atttatcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatg 335  Q
    ||||| ||||||| |||||||||| |||||| ||| ||||||| | ||| | |||||||||||||||    
T  20533852 atttaccttataaggtgaataagtgggatgtgtggggttcgaacctcgatctctgcatataataatg 20533786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 24034089 - 24034123
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||||||||||||||||||||    
T  24034089 gttcgaaccccgacccctgcatataataatgcatt 24034123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 30811836 - 30811902
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| |||||||||| ||||||| | |||||||||||| |||| |  || ||||||||||||    
T  30811836 atcttataaggtgaataagtgggatgtccgaagttcgaatcccaacccttatatgtaataatgcatt 30811902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 339
Target Start/End: Complemental strand, 9802970 - 9802917
Alignment:
Q  286 aataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| || |||| || ||||||| |||||||| ||||||||||||||||||    
T  9802970 aataagtggggtgtccggggttcgaaccccgacccttgcatataataatgcatt 9802917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 10207736 - 10207667
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||||| ||||||||||    |||| ||||||| ||  |||||| ||||||||||||||||||||||    
T  10207736 atcttataaggtgaataagtgaagtgtccggagttcaaactccgaccactgcatataataatgcattatc 10207667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 324
Target Start/End: Complemental strand, 32256217 - 32256176
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgc 324  Q
    |||||||||| ||||||| |||||||||| ||||||||||||    
T  32256217 gtgaataagtgggatgtccggagttcgaaccccgacccctgc 32256176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 44132591 - 44132632
Alignment:
Q  297 tgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||||||||||| ||||||| |||||||||| |||||||    
T  44132591 tgtctggagttcgaaccccgacctctgcatataacaatgcat 44132632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 3e-16; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 278 - 342
Target Start/End: Original strand, 27558880 - 27558943
Alignment:
Q  278 ataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||| |||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||    
T  27558880 ataaggtgaataagtggggtgtctgg-gttcgaatcccgacccctgcatataataatgcattatc 27558943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 35301173 - 35301233
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| |||||||||| |||||||||||||||||||||||||||    
T  35301173 taaagtgaataagtagggtgtccggagttcgaaccccgacccctgcatataataatgcatt 35301233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 9525046 - 9524982
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||| ||||||| |||| ||||||||||||||||||||||    
T  9525046 cttataaggtgaataagtagggtgtctggggttcgaaccccggcccctgcatataataatgcatt 9524982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 24608489 - 24608553
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||| ||||||| |||| ||||||||||||||||||||||    
T  24608489 cttataaggtgaataagtagggtgtctggggttcgaaccccggcccctgcatataataatgcatt 24608553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 27822159 - 27822092
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||| |||||||||| || ||| ||| |||| ||||| |||||||||||||||||||||||||||    
T  27822159 cttataaggtgaataagtggggtgtttggggttcaaatccggacccctgcatataataatgcattatc 27822092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 4293953 - 4293908
Alignment:
Q  294 ggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||    
T  4293953 ggatgtctggggttcgaaccccgacccctgcatataataatgcatt 4293908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 2696618 - 2696558
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  2696618 taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 2696558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 2800104 - 2800044
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  2800104 taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 2800044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 10199748 - 10199812
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||| ||| ||||||| |||| ||||||||||||||||||||||    
T  10199748 cttataaggtgaataagtggggtgtttggggttcgaaccccggcccctgcatataataatgcatt 10199812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 13702358 - 13702422
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| ||||||||||  | ||||||  ||||||| |||||||||||||||||||||||||||    
T  13702358 cttataaggtgaataagtgaggtgtctgaggttcgaaccccgacccctgcatataataatgcatt 13702422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 14683965 - 14683902
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| ||||||| || ||||||| |||||||| ||||||||||||||||||    
T  14683965 cttataaggtgaataagtgggatgtccggggttcgaaccccgaccc-tgcatataataatgcatt 14683902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 15042371 - 15042435
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  15042371 cttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 15042435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 33982279 - 33982219
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatg 335  Q
    ||||||||||||||||||  | ||||||| ||||||| |||||||||||||||||| ||||    
T  33982279 cttataaagtgaataagtgcggtgtctggggttcgaaccccgacccctgcatataacaatg 33982219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 42761871 - 42761935
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||||||| |  ||||  ||||||||| |||| ||||||||||||||||||||||    
T  42761871 cttataaagtgaataagtggagtgtccagagttcgaaccccgccccctgcatataataatgcatt 42761935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 283 - 342
Target Start/End: Original strand, 4798555 - 4798614
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||||||||| || |||| || ||||||| |||| |||||||||||||||||||||||||    
T  4798555 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattatc 4798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 7345509 - 7345454
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||| || ||| ||||||| ||| ||||||||||||||||||||||||||    
T  7345509 gtgaataagtggggtgtttggagttggaagcccgacccctgcatataataatgcat 7345454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 25139902 - 25139957
Alignment:
Q  284 tgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| ||||||  || ||||||| |||||||||||||||||||||||||||    
T  25139902 tgaataagtgggatgttcggggttcgaaccccgacccctgcatataataatgcatt 25139957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 38790582 - 38790643
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatccc-gacccctgcatataataatgcatt 339  Q
    |||||||||||||| || ||||||| ||||||| ||| | ||||||||||||||||||||||    
T  38790582 taaagtgaataagtggggtgtctggggttcgaacccccggcccctgcatataataatgcatt 38790643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 1588852 - 1588792
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| |  ||||||| |||| ||||||||||||||||||||||    
T  1588852 taaagtgaataagtggggtgtccgaggttcgaaccccggcccctgcatataataatgcatt 1588792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 7540494 - 7540558
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||  | ||| ||| |||||||||||||||||||||||||||    
T  7540494 cttataaggtgaataagtgggttgtccagggttagaaccccgacccctgcatataataatgcatt 7540558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 13537317 - 13537381
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||  ||||||||| || ||||||| ||||||| |||||| ||||||||||| ||||||||    
T  13537317 cttataagatgaataagtggggtgtctggggttcgaaccccgacacctgcatataacaatgcatt 13537381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 13626865 - 13626929
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||  ||||||||| || ||||||| ||||||| |||||| ||||||||||| ||||||||    
T  13626865 cttataagatgaataagtggggtgtctggggttcgaaccccgacacctgcatataacaatgcatt 13626929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 14012701 - 14012637
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| ||| |||||| |||| ||||||||||||| ||||||||    
T  14012701 cttataatgtgaataagtggggtgtccggacttcgaaccccggcccctgcatataacaatgcatt 14012637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 17110388 - 17110329
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||| |||||||| ||||||| || ||| ||| |||||||||||||||||||||||||||    
T  17110388 taaagcgaataagtgggatgtccgg-gtttgaaccccgacccctgcatataataatgcatt 17110329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 25119289 - 25119233
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||| ||| ||||||| || ||||||| ||| |||||||||||||||||||||||    
T  25119289 gtgaatgagtgggatgtccggggttcgaaccccaacccctgcatataataatgcatt 25119233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 42688145 - 42688081
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| || ||||||| || |||  || |||||||||||||||||| ||||||||||||||||    
T  42688145 cttataaggtaaataagtggggtgttcggggttcgaatcccgacccctacatataataatgcatt 42688081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 344
Target Start/End: Complemental strand, 5323981 - 5323942
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatgcattatcac 344  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  5323981 gttcgaaccccgacccctgcatataataatgcattgtcac 5323942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 13654837 - 13654896
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||||||| || |||| |||||| ||||||||||| ||| |||| |||||||||    
T  13654837 taaagtgaataagtggggtgtccggagtttgaatcccgacctctgtatatgataatgcat 13654896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 13713479 - 13713538
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||||||| || |||| |||||| ||||||||||| ||| |||| |||||||||    
T  13713479 taaagtgaataagtggggtgtccggagtttgaatcccgacctctgtatatgataatgcat 13713538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 342
Target Start/End: Original strand, 17987455 - 17987522
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||| |||||||| | || |||| || |||||||  ||| |||||||||||||||||||||||||    
T  17987455 cttataaggtgaataattggggtgtccggggttcgaactccggcccctgcatataataatgcattatc 17987522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 342
Target Start/End: Original strand, 34073245 - 34073312
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||| |||||||||| || |||| || ||||||| |  ||||||| |||||||||||||||||||    
T  34073245 cttataaggtgaataagtggggtgtccggggttcgaaccttgacccctacatataataatgcattatc 34073312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 44254326 - 44254381
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||| |||||||  ||||||||| |||||| || ||||||||||||||||    
T  44254326 gtgaataagtaggatgtccagagttcgaaccccgactcccgcatataataatgcat 44254381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 1032965 - 1033030
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| |||||||||| || |||  || |||||||  ||||||||||||||||||||||||||    
T  1032965 atcttataaggtgaataagtggggtgttcgg-gttcgaactccgacccctgcatataataatgcatt 1033030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 6064436 - 6064402
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||||||||||||||||||||    
T  6064436 gttcgaaccccgacccctgcatataataatgcatt 6064402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 21133547 - 21133589
Alignment:
Q  297 tgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||    
T  21133547 tgtctggggttcgaaccccgactcctgcatataataatgcatt 21133589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 40329608 - 40329678
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatc-ccgacccctgcatataataatgcattatc 342  Q
    |||||||||||||||||||| || |||| |   |||||| | ||||||| |||||||||||||||||||||    
T  40329608 atcttataaagtgaataagtagggtgtccgagattcgaacctccgacccatgcatataataatgcattatc 40329678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 6978879 - 6978842
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  6978879 gttcgaaccccaacccctgcatataataatgcattatc 6978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 10970357 - 10970288
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||||| |||||||||| || |||  || ||| ||| |||  |||||||||||||||||||||||||    
T  10970357 atcttataaggtgaataagtggggtgttcggggtttgaaccccagcccctgcatataataatgcattatc 10970288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 30199760 - 30199719
Alignment:
Q  298 gtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || ||||||||||||||||| ||||||    
T  30199760 gtctggagttcgaaccctgacccctgcatataatagtgcatt 30199719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 40249882 - 40249950
Alignment:
Q  273 atcttataaagtgaataagttgga--tgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| |||||||||| |||  |||| ||||||||||  |||| | |||||||||||||||||||    
T  40249882 atcttataaggtgaataagtgggaggtgtccggagttcgaactccgatcactgcatataataatgcatt 40249950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 42711238 - 42711189
Alignment:
Q  286 aataagttggatgtctggagttcgaatcccgacccctgcatataataatg 335  Q
    ||||||| ||||||| ||||||| ||||| ||||||||||||||| ||||    
T  42711238 aataagtgggatgtccggagttcaaatcctgacccctgcatataacaatg 42711189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 2366446 - 2366382
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||| ||||||||| |||||||||||||||||||||||||||    
T  2366446 cttataaggtgaataagtggggtgtctagagttcgaaccccgacccctgcatataataatgcatt 2366382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 275 - 342
Target Start/End: Original strand, 4042274 - 4042341
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||||||| |||||||||||| |||| | ||||||||  |||||||||||||||||||||||||||||    
T  4042274 cttataaaatgaataagttgggtgtccgaagttcgaactccgacccctgcatataataatgcattatc 4042341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 31694159 - 31694095
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||| ||||||| || |||| |||||||||||| || ||||||||||||||||||||||    
T  31694159 cttataaagtaaataagtggggtgtccggagttcgaatctcgtcccctgcatataataatgcatt 31694095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 21086195 - 21086129
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| ||||||||||||| |||| ||||||||||   ||| |||||||||||||||||||||    
T  21086195 atcttataaggtgaataagttgggtgtccggagttcgaacttcgatccctgcatataataatgcatt 21086129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 41417285 - 41417343
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgca 337  Q
    |||||||||||||| || ||||||| ||||||| ||||||||||||||||||| |||||    
T  41417285 taaagtgaataagtggggtgtctggggttcgaaccccgacccctgcatataatgatgca 41417343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 924292 - 924365
Alignment:
Q  269 atttatcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||||||||| | |||||||| || ||||||| ||||||| ||| |||||| |||||||||||||| ||||    
T  924292 atttatcttataaggcgaataagtggggtgtctggggttcgaaccccaacccctacatataataatgcactatc 924365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 2261490 - 2261554
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| ||||||||||||| |||| ||  |||||| |||| ||||||||||||||||||||||    
T  2261490 cttataaggtgaataagttgggtgtccgggattcgaaccccggcccctgcatataataatgcatt 2261554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 22965964 - 22966028
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||| ||||||| | || ||||||||||||||||||||||    
T  22965964 cttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataataatgcatt 22966028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 23685568 - 23685624
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||| || ||||||| ||||||| |||| ||||||||||||||||||||||    
T  23685568 gtgaataagtggggtgtctggggttcgaaccccggcccctgcatataataatgcatt 23685624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 24304293 - 24304353
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||| | || |||  |||||||||| |||||||||||||||||||||||||||    
T  24304293 taaagtgaataaatggggtgttcggagttcgaaccccgacccctgcatataataatgcatt 24304353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 30644258 - 30644194
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||| |||||||  ||| ||||||||||||||||||||||    
T  30644258 cttataaggtgaataagtggggtgtctggggttcgaacaccggcccctgcatataataatgcatt 30644194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 47355894 - 47355835
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||| ||||||||| |||||||||| ||||||| |||| ||||||||||||| |||||||    
T  47355894 taaaatgaataagtgggatgtctggggttcgaaccccggcccctgcatataacaatgcat 47355835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 14818375 - 14818433
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgca 337  Q
    |||||||||||||| || ||| ||| ||| ||| |||||||||||||||||||||||||    
T  14818375 taaagtgaataagtggggtgtttggggtttgaaccccgacccctgcatataataatgca 14818433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 15265373 - 15265431
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgca 337  Q
    |||||||||||||| || ||| ||| ||| ||| |||||||||||||||||||||||||    
T  15265373 taaagtgaataagtggggtgtttggggtttgaaccccgacccctgcatataataatgca 15265431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 16814781 - 16814723
Alignment:
Q  280 aaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||||||||| |  ||||||| ||||||| |||||||||| |||||||||||||||    
T  16814781 aaagtgaataagtggagtgtctggggttcgaaccccgacccctacatataataatgcat 16814723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 276 - 342
Target Start/End: Original strand, 25711138 - 25711204
Alignment:
Q  276 ttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||||||||||||| || |||| |  ||||||| |||| ||||| |||||||||||||||||||    
T  25711138 ttataaagtgaataagtggggtgtccgaggttcgaaccccggcccctacatataataatgcattatc 25711204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 342
Target Start/End: Original strand, 36315982 - 36316047
Alignment:
Q  277 tataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||| |||||||||| || |||| |  ||||||| |||| |||||||||||||||||||||||||    
T  36315982 tataaggtgaataagtggggtgtccgaggttcgaaccccggcccctgcatataataatgcattatc 36316047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 5787550 - 5787486
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||| ||| |||| || |||| ||||||||||||||||||||||    
T  5787550 cttataaggtgaataagtggggtgtttggggttcaaaccccggcccctgcatataataatgcatt 5787486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 20947846 - 20947786
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||||||||  |||||||| |||||||| ||  |||||||||||||||| ||||||    
T  20947846 taaagtgaataagtgagatgtctgaagttcgaaccctaacccctgcatataatattgcatt 20947786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 21285359 - 21285423
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || ||||||| |||| ||||||||||||| ||||||||    
T  21285359 cttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcatt 21285423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 24397030 - 24396970
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || ||||  | |||||||  ||||||||||||||||||||||||||    
T  24397030 taaagtgaataagtagggtgtccagggttcgaactccgacccctgcatataataatgcatt 24396970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 29658278 - 29658342
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || ||||||| |||| ||||||||||||| ||||||||    
T  29658278 cttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcatt 29658342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 29779043 - 29779003
Alignment:
Q  302 ggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  29779043 ggagttcgaactccgacccctgcatataataatgcattatc 29779003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 47552302 - 47552238
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || ||||||| |||| ||| ||||||||||||||||||    
T  47552302 cttataaggtgaataagtagggtgtccggggttcgaaccccggcccttgcatataataatgcatt 47552238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 5180701 - 5180760
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||||||||||||||  || ||||||| |||||| |||||||| |||| |||||    
T  5180701 taaagtgaataagttggatgttcggggttcgaaccccgactcctgcatacaatattgcat 5180760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 8724469 - 8724402
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||| |||||||||| || |||| |  |||||| |||||||| ||||||||||||||| ||||||    
T  8724469 cttataaggtgaataagtggggtgtccgaggttcgattcccgacctctgcatataataatgtattatc 8724402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 11808119 - 11808064
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||| || |||| || ||||||| |||||||||||||||||| |||||||    
T  11808119 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcat 11808064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 338
Target Start/End: Complemental strand, 14102550 - 14102487
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||| |||||||||| || |||| || |||| || |||| |||||||||||||||||||||    
T  14102550 cttataaggtgaataagtggggtgtccggggttcaaaccccggcccctgcatataataatgcat 14102487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 338
Target Start/End: Complemental strand, 14412567 - 14412504
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||| |||||||||| || |||| || |||| || |||| |||||||||||||||||||||    
T  14412567 cttataaggtgaataagtggggtgtccggggttcaaaccccggcccctgcatataataatgcat 14412504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 23799385 - 23799326
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||| |||||||| || |||| |  |||||||||||||||||||||||||| |||||||    
T  23799385 taaagagaataagtggggtgtccgaggttcgaatcccgacccctgcatataacaatgcat 23799326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 24579300 - 24579355
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||| || ||||||| ||||||||| |  |||||||||||||||||||||    
T  24579300 gtgaataagtggggtgtctggggttcgaatctcatcccctgcatataataatgcat 24579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 37449520 - 37449583
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||||||||||||| |||||||    |||| ||  |||||||||||||||||||||||||||||    
T  37449520 taaagtgaataagtgggatgtccaaggttcaaactccgacccctgcatataataatgcattatc 37449583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 281 - 339
Target Start/End: Complemental strand, 15912857 - 15912800
Alignment:
Q  281 aagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||| | |||||||||| ||||||| ||| |||||||||||||| ||||||||    
T  15912857 aagtgaataaatgggatgtctgg-gttcgaaccccaacccctgcatataacaatgcatt 15912800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 30152832 - 30152766
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| |||||||||| || |||  || ||||||| ||||||||||  |||||||||||||||    
T  30152832 atcttataaggtgaataagtggggtgttcggggttcgaaccccgacccctatatataataatgcatt 30152766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 31475850 - 31475908
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgca 337  Q
    |||||||||||||| || |||| || ||||||| |||  ||||||||||||||||||||    
T  31475850 taaagtgaataagtggggtgtcaggggttcgaaccccagcccctgcatataataatgca 31475908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 41139145 - 41139112
Alignment:
Q  306 ttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||| |||||||||||||||||||||||||||    
T  41139145 ttcgaaccccgacccctgcatataataatgcatt 41139112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 3e-16; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 37032185 - 37032249
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || |||||||||||||||||||||||||||||||||||    
T  37032185 cttataaggtgaataagtggggtgtccggggttcgaatcccgacccctgcatataataatgcatt 37032249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 22158336 - 22158269
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||| |||||||||||||||||| |   |||||| ||||||||||||||||||||||||||||||    
T  22158336 cttataaggtgaataagttggatgtccgagtttcgaaccccgacccctgcatataataatgcattatc 22158269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 8690299 - 8690239
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||||||||||||||||||||||||||    
T  8690299 taaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcatt 8690239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 52031292 - 52031232
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || ||||||| ||||||| ||||||||||||||||| |||||||||    
T  52031292 taaagtgaataagtggggtgtctggggttcgaaccccgacccctgcatatactaatgcatt 52031232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 9693047 - 9692984
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||||||||||||| || |||| || ||||||| |||| |||||||||||||||||||||||||    
T  9693047 taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattatc 9692984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 10098216 - 10098150
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||  ||||||||| || |||| || |||||||||||| ||||||||||||||||||||||    
T  10098216 atcttataagatgaataagtggggtgtccggggttcgaatcccggcccctgcatataataatgcatt 10098150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 50657971 - 50657905
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||  ||||||||| |||||| ||||||||||| |  ||||||||||||||||||||||||    
T  50657971 atcttataagatgaataagtgggatgtttggagttcgaaccatgacccctgcatataataatgcatt 50657905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 11872958 - 11872898
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| ||||||| || |||||||  ||||||||| ||||||||||||||||    
T  11872958 taaagtgaataagtaggatgtccggggttcgaactccgacccctacatataataatgcatt 11872898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 14149878 - 14149818
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  14149878 taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 14149818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 28520741 - 28520801
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  28520741 taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 28520801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 36954222 - 36954162
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||| | || |||| || ||||||| |||||||||||||||||||||||||||    
T  36954222 taaagtgaataaatggggtgtccggggttcgaaccccgacccctgcatataataatgcatt 36954162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 47017952 - 47018016
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  47017952 cttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 47018016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 48968220 - 48968280
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  48968220 taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 48968280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 53291559 - 53291464
Alignment:
Q  241 gtcaggtagcttagtgc-tagaattcactatttatcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||||||||||| ||||||||||       ||||||| ||||||||||||| |||| ||  ||| ||| ||||||| ||||||||||||||||||    
T  53291559 gtcaggtagcttagtgcatagaattcac-------cttataaggtgaataagttgggtgtccgggattcaaattccgacccatgcatataataatgcatt 53291467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 56546459 - 56546519
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || ||||||  ||||||| |||| ||||||||||||||||||||||    
T  56546459 taaagtgaataagtggggtgtctgtggttcgaaccccggcccctgcatataataatgcatt 56546519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 11084262 - 11084321
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||||| | || ||||  |||||||||||||||||||||||||||| |||||||    
T  11084262 taaagtgaataaatggggtgtcccgagttcgaatcccgacccctgcatataaaaatgcat 11084321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 20610820 - 20610765
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||| ||||||| |||||||||| |||| ||||||||||||| |||||||    
T  20610820 gtgaataagtgggatgtccggagttcgaaccccggcccctgcatataacaatgcat 20610765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 33076611 - 33076556
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||| || |||| || ||||||| ||||||||||||||||||||||||||    
T  33076611 gtgaataagtagggtgtccggggttcgaaccccgacccctgcatataataatgcat 33076556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 269 - 339
Target Start/End: Complemental strand, 9084854 - 9084784
Alignment:
Q  269 atttatcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||| |||||||  ||||||||| || |||| |  |||||||||||||||||||||||||| ||||||||    
T  9084854 atttaccttataagatgaataagtggggtgtccgaggttcgaatcccgacccctgcatataacaatgcatt 9084784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 21476096 - 21476154
Alignment:
Q  284 tgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||||| ||||||| ||||||||||   ||||||||||||||||||||||| ||||    
T  21476096 tgaataagtgggatgtccggagttcgaacatcgacccctgcatataataatgcaatatc 21476154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 27921976 - 27921922
Alignment:
Q  284 tgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||  ||||||||| ||||||| |||| |||||||||||||||||||||    
T  27921976 tgaataagtgagatgtctggggttcgaaccccggcccctgcatataataatgcat 27921922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 31601897 - 31601831
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| |||||||||| || |||| || ||||||||| || ||||||||||||||||| ||||    
T  31601897 atcttataaggtgaataagtggggtgtccggggttcgaatctcggcccctgcatataataatacatt 31601831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 35451125 - 35451191
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| ||||||||||  | |||| | ||||||||  ||||||||||||||||||||||||||    
T  35451125 atcttataaggtgaataagtgaggtgtccgtagttcgaactccgacccctgcatataataatgcatt 35451191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 18497471 - 18497418
Alignment:
Q  285 gaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||| ||||||| |||||||||| ||| |||||||||||||| |||||||    
T  18497471 gaataagtgggatgtccggagttcgaaccccaacccctgcatataacaatgcat 18497418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 548893 - 548957
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||   |||||| |||| ||||||||||||||||||||||    
T  548893 cttataaggtgaataagtggggtgtctgagtttcgaaccccggcccctgcatataataatgcatt 548957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 3442932 - 3442868
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||| ||||||| |||| ||||  ||||||||||||||||    
T  3442932 cttataaggtgaataagtggggtgtctggggttcgaaccccggccccgacatataataatgcatt 3442868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 3465672 - 3465608
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || |||||||  ||| ||||||||||||||||||||||    
T  3465672 cttataaggtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcatt 3465608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 6054069 - 6054005
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| ||||||| ||  | ||| ||||||||||| |||| ||||||||||||||||||||||    
T  6054069 cttataaggtgaatacgtgtggtgtttggagttcgaaccccggcccctgcatataataatgcatt 6054005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 15640453 - 15640513
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || ||||||  ||||||| ||||| | |||||||||||||||||||    
T  15640453 taaagtgaataagtggggtgtctgaggttcgaaccccgaacactgcatataataatgcatt 15640513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 21200615 - 21200551
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatat-aataatgcattatc 342  Q
    |||||||||||||| || || | |||||||||| |||||||||||||||| ||| ||||||||||    
T  21200615 taaagtgaataagtggggtgaccggagttcgaaccccgacccctgcatataaattatgcattatc 21200551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 32885777 - 32885713
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| |  |||||||  ||||||||||||||||||||||||||    
T  32885777 cttataaggtgaataagtggggtgtccgaggttcgaactccgacccctgcatataataatgcatt 32885713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 34773689 - 34773753
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||||||| || |||| || ||||||| | |  ||||||||||||||||||||||    
T  34773689 cttataaagtgaataagtggggtgtccggggttcgaacctcagcccctgcatataataatgcatt 34773753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 35747488 - 35747552
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| |||||||||| | ||||||||||||| |||||| ||||    
T  35747488 cttataaggtgaataagtggggtgtccggagttcgaacctcgacccctgcataaaataatacatt 35747552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 38433400 - 38433336
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||| |||||||  ||||| ||| ||||||||||||||||    
T  38433400 cttataaggtgaataagtggggtgtctggggttcgaactccgactcctacatataataatgcatt 38433336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 40150558 - 40150498
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||||||||  | |||| || ||||||| ||||||||||| |||||||||||||||    
T  40150558 taaagtgaataagtgaggtgtccggggttcgaaccccgacccctgtatataataatgcatt 40150498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 42411464 - 42411524
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||| ||||||| || |||| || ||||||| ||||||||||||||||||| |||||||    
T  42411464 taaagtaaataagtggggtgtccggggttcgaaccccgacccctgcatataattatgcatt 42411524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 53697986 - 53698050
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| || ||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  53697986 cttataaggtaaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 53698050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 43115356 - 43115293
Alignment:
Q  276 ttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||| |||||||| | || |||| || ||||||||| |||||||||||||||||||| ||||    
T  43115356 ttataaggtgaataaatggggtgtccggggttcgaatctcgacccctgcatataataatacatt 43115293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 49319474 - 49319419
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||| || |||| || ||| ||| ||||||||||||||||||||||||||    
T  49319474 gtgaataagtggggtgtccggggttggaaccccgacccctgcatataataatgcat 49319419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 305 - 335
Target Start/End: Complemental strand, 1297912 - 1297882
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatg 335  Q
    |||||||||||||||||||||||||||||||    
T  1297912 gttcgaatcccgacccctgcatataataatg 1297882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 1589172 - 1589226
Alignment:
Q  284 tgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||| | ||||||| || |||||||||| ||||||||||||||| |||||||    
T  1589172 tgaataaatgggatgtccggggttcgaatcctgacccctgcatataacaatgcat 1589226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 3465877 - 3465915
Alignment:
Q  300 ctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  3465877 ctggagttcgaatcctgacctctgcatataataatgcat 3465915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 9172407 - 9172441
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||||||||||||||||||||    
T  9172407 gttcgaaccccgacccctgcatataataatgcatt 9172441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 269 - 339
Target Start/End: Original strand, 13211352 - 13211422
Alignment:
Q  269 atttatcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||| ||||| || ||||||||| |  |||| || ||||||| |||||||| ||||||||||||||||||    
T  13211352 atttaccttatcaaatgaataagtggagtgtccggggttcgaaccccgacccatgcatataataatgcatt 13211422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 35112796 - 35112730
Alignment:
Q  276 ttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||||| || ||||||  ||||||| |  ||||||| |||||||||| |||||||||||||||||||    
T  35112796 ttataaggtaaataagcgggatgtccgatgttcgaaccccgacccctacatataataatgcattatc 35112730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 52330919 - 52330969
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatata 329  Q
    |||||||||||||| || |||| |||||||||| |||| ||||||||||||    
T  52330919 taaagtgaataagtggggtgtccggagttcgaaccccggcccctgcatata 52330969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 9924937 - 9924884
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgc 336  Q
    |||||||||| |  |||| || ||||||| ||||||||||||||||||||||||    
T  9924937 gtgaataagtggagtgtccggggttcgaaccccgacccctgcatataataatgc 9924884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 305 - 342
Target Start/End: Original strand, 33944399 - 33944436
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  33944399 gttcgaaccccggcccctgcatataataatgcattatc 33944436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 34106683 - 34106627
Alignment:
Q  282 agtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||| |||||| || ||||||| ||||||| ||||||| |||||||||||||||||||    
T  34106683 agtggataagtggggtgtctggggttcgaa-cccgacctctgcatataataatgcatt 34106627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 37729006 - 37728965
Alignment:
Q  297 tgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||| |||||||||| | ||||||||||||||||||||||||    
T  37729006 tgtccggagttcgaacctcgacccctgcatataataatgcat 37728965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 38690745 - 38690689
Alignment:
Q  285 gaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||||||| || |||| || ||||||| ||||||||||||||||||| ||||||||||    
T  38690745 gaataagtggggtgtccggggttcgaaccccgacccctgcatataat-atgcattatc 38690689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 45350364 - 45350303
Alignment:
Q  276 ttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgca 337  Q
    |||||| |||||||||| || |||| || |||||||  |||||| |||||||||||||||||    
T  45350364 ttataaggtgaataagtggggtgtccggggttcgaactccgacctctgcatataataatgca 45350303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 45359843 - 45359782
Alignment:
Q  276 ttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgca 337  Q
    |||||| |||||||||| || |||| || |||||||  |||||| |||||||||||||||||    
T  45359843 ttataaggtgaataagtggggtgtccggggttcgaactccgacctctgcatataataatgca 45359782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 305 - 338
Target Start/End: Complemental strand, 49743421 - 49743388
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||||| |||||||||||||||||||||    
T  49743421 gttcgaatcccggcccctgcatataataatgcat 49743388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 53815778 - 53815721
Alignment:
Q  282 agtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||||| || |||| || ||||||| |||  ||||||||||||||||||||||    
T  53815778 agtgaataagtggggtgtccggggttcgaaccccagcccctgcatataataatgcatt 53815721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 101920 - 101853
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||| |||||||||| |||||| ||| ||||||| |||| |||||||||||||||||||||||||    
T  101920 cttataaggtgaataagtgggatgtttggggttcgaaccccggcccctgcatataataatgcattatc 101853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 275 - 342
Target Start/End: Original strand, 6025393 - 6025459
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||||||  ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||    
T  6025393 cttataagatgaataagt-ggatgtccggggttcgaatcccgacccctgcatataataatgcattatc 6025459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 20716396 - 20716462
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||  ||||||||| || | |||||||||||||||||||||||| ||||||||||||||||    
T  20716396 atcttataagatgaataagtggggtatctggagttcgaatcccgacccctacatataataatgcatt 20716462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 9064951 - 9064891
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||| ||||||| || ||||||| ||||||| |||| ||||||||||||||||||||||    
T  9064951 taaagtaaataagtggggtgtctggggttcgaaccccggcccctgcatataataatgcatt 9064891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 12127915 - 12127979
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| |  |||| || |||||||| ||||||||||||||||||||||||||    
T  12127915 cttataaggtgaataagtggcgtgtccggggttcgaattccgacccctgcatataataatgcatt 12127979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 18631561 - 18631501
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatg 335  Q
    |||||||||||||||||| || | | ||| |||||||||||||||||||||||||| ||||    
T  18631561 cttataaagtgaataagtggggtatttggggttcgaatcccgacccctgcatataacaatg 18631501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 21507207 - 21507271
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||||||| || |||| ||||||| ||  ||||||||||||||||||||| ||||    
T  21507207 cttataaagtgaataagtggggtgtccggagttcaaactccgacccctgcatataataatacatt 21507271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 19417911 - 19417844
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    |||||||  ||||||||| || |||||||  |||||||||||| |||||||||||||||| |||||||    
T  19417911 cttataagatgaataagtggggtgtctgggattcgaatcccgatccctgcatataataatacattatc 19417844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 9491739 - 9491805
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| |||||||||| || |||| || ||||||| |||| ||||| ||||||||||||||||    
T  9491739 atcttataaggtgaataagtggggtgtccggggttcgaaccccggcccctacatataataatgcatt 9491805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 269 - 339
Target Start/End: Complemental strand, 26528662 - 26528592
Alignment:
Q  269 atttatcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||| ||||||| |||||||||| || |||| |  ||| ||| |||||||||||||||||||||||||||    
T  26528662 atttaccttataaggtgaataagtggggtgtccgaggtttgaaccccgacccctgcatataataatgcatt 26528592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 282 - 339
Target Start/End: Original strand, 19642560 - 19642617
Alignment:
Q  282 agtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||||| || ||||||| ||||||| |||||||  ||||||||||||||||||    
T  19642560 agtgaataagtggggtgtctggggttcgaaccccgaccgatgcatataataatgcatt 19642617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 5288351 - 5288415
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||| |  | |||| |||||||| | |||||||||||||||||||||||||||    
T  5288351 cttataaggtgaataattgaggtgtccggagttcggaccccgacccctgcatataataatgcatt 5288415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 6144049 - 6143990
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||||||||| ||||||||||||||||    
T  6144049 taaagtgaataagtggggtgtccggggttcgaa-cccgacccctacatataataatgcatt 6143990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 9438391 - 9438327
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||| ||| || |||| || ||||||| ||| |||||||||||||||||||||||    
T  9438391 cttataaggtgaatgagtggggtgtccggggttcgaaccccaacccctgcatataataatgcatt 9438327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 12089186 - 12089122
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| || |||||||  ||| ||||||||||||||||||||||    
T  12089186 cttataaggtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcatt 12089122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 14981712 - 14981772
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || ||||  | ||||||| |||| ||||||||||||||||||||||    
T  14981712 taaagtgaataagtggggtgtccagggttcgaaccccggcccctgcatataataatgcatt 14981772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 20696951 - 20696899
Alignment:
Q  286 aataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||| ||||||||||||||| ||| | ||||||||||| ||||||||    
T  20696951 aataagttgggtgtctggagttcgaaccccaatccctgcatatagtaatgcat 20696899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 22389756 - 22389820
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| ||  |||||| || ||||||||||||||||||||||||    
T  22389756 cttataaggtgaataagtggggtgtccgggattcgaaccctgacccctgcatataataatgcatt 22389820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 23771122 - 23771058
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||| ||||||||| | || |||| |||||||||| |||  ||||||||||||||||||||||    
T  23771122 cttatagagtgaataaatggggtgtccggagttcgaaccccttcccctgcatataataatgcatt 23771058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 32057123 - 32057059
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||  ||||||||| |||| ||||| ||||||| | ||||| |||||||||||||||||||    
T  32057123 cttataagatgaataagtgggatctctggggttcgaacctcgaccactgcatataataatgcatt 32057059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 34396172 - 34396108
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||| | || |||| ||||||||||  ||| ||||||||||||||||||||||    
T  34396172 cttataaggtgaataaatagggtgtccggagttcgaactccggcccctgcatataataatgcatt 34396108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 35190852 - 35190788
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||  || |||||||  ||||||||||||||||||||||||||    
T  35190852 cttataaggtgaataagtggggtgttcggggttcgaactccgacccctgcatataataatgcatt 35190788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 19279544 - 19279477
Alignment:
Q  269 atttatcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgc 336  Q
    ||||||||||||| |||||||||| || |||| |  |||||||  ||| |||||||||||||||||||    
T  19279544 atttatcttataaggtgaataagtggggtgtccgaggttcgaactccggcccctgcatataataatgc 19279477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 25020534 - 25020597
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||| |||||||||| || |||| || ||||||| || | |||||||||||||||||||||    
T  25020534 cttataaggtgaataagtggggtgtccggggttcgaacccaggcccctgcatataataatgcat 25020597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 10373654 - 10373620
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||||||||||||||||||||    
T  10373654 gttcgaaccccgacccctgcatataataatgcatt 10373620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 10377128 - 10377194
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||||| |||||||||| || |||  || ||||||| |||| || |||||||||||||||||||    
T  10377128 atcttataacgtgaataagtggggtgttcggggttcgaaccccggcctctgcatataataatgcatt 10377194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 15288961 - 15289023
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgca 337  Q
    |||||||  ||||||||| || ||||||||||||||| |||  ||||| ||||||||||||||    
T  15288961 cttataagatgaataagtggggtgtctggagttcgaaccccagcccctacatataataatgca 15289023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 16801884 - 16801818
Alignment:
Q  269 atttatcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatg 335  Q
    |||||||||| || |||||||||| |  |||| ||| |||||| |||||| ||||||||||||||||    
T  16801884 atttatcttacaaggtgaataagtggtgtgtccggaattcgaaccccgactcctgcatataataatg 16801818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 25064684 - 25064738
Alignment:
Q  284 tgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||| |||| || ||||||| ||||||| ||| ||||||||||||||||||||||    
T  25064684 tgaagaagtggggtgtctggggttcgaaccccaacccctgcatataataatgcat 25064738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 31949861 - 31949895
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||||||||||||||||||||    
T  31949861 gttcgaaccccgacccctgcatataataatgcatt 31949895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 30833096 - 30833043
Alignment:
Q  285 gaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||| || |||| || ||||||| |||||||||||||||||| |||||||    
T  30833096 gaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcat 30833043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 4674825 - 4674885
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||||||||||||||||||||||||||    
T  4674825 taaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcatt 4674885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 29144231 - 29144167
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||| | || |||||||||||| || |||||||||||||||||||||||||||    
T  29144231 cttataacgtgaataaatggggtgtctggagttcaaaccccgacccctgcatataataatgcatt 29144167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 33800982 - 33800918
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||| ||||||| |||| ||||||||||||||||||||||    
T  33800982 cttataaggtgaataagtggggtgtctggggttcgaaccccggcccctgcatataataatgcatt 33800918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 36045144 - 36045204
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||||||||||||||||||||||||||    
T  36045144 taaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcatt 36045204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 280 - 338
Target Start/End: Original strand, 32252930 - 32252988
Alignment:
Q  280 aaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||||||| |||| ||||||| ||||||| |||||||||| |||||||||||||||    
T  32252930 aaagtgaataaattgggtgtctggggttcgaaccccgacccctacatataataatgcat 32252988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 1244733 - 1244794
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgc 336  Q
    ||||||| |||||||||| || ||||||| ||||||| || |||||||||||||||||||||    
T  1244733 cttataaggtgaataagtggggtgtctggggttcgaaccctgacccctgcatataataatgc 1244794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 1463956 - 1463896
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  1463956 taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 1463896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 2029134 - 2029198
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||  || |||||||||||||||||||||||||||||| ||||    
T  2029134 cttataaggtgaataagtggggtgttcggggttcgaatcccgacccctgcatataataatacatt 2029198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 6806646 - 6806710
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| |  |||| || |||||||||||||||||||||||||| ||||||||    
T  6806646 cttataatgtgaataagtggagtgtccggggttcgaatcccgacccctgcatataacaatgcatt 6806710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 10943801 - 10943741
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| || ||||||| |||| ||||||||||||||||||||||    
T  10943801 taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 10943741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 20945897 - 20945961
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||| ||| |||||| |||| ||||||||||||||||||||||    
T  20945897 cttataaggtgaataagtggggtgtccggatttcgaaccccggcccctgcatataataatgcatt 20945961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 42801447 - 42801515
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatca 343  Q
    |||||||  |||||||||  | |||| || ||||||| |||||||||||||||||||||||||||||||    
T  42801447 cttataagatgaataagtgaggtgtccggggttcgaaccccgacccctgcatataataatgcattatca 42801515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 8015924 - 8015857
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcattatc 342  Q
    ||||||| |||||||||| || |||| || ||||||| |||| ||||||||| |||||||||||||||    
T  8015924 cttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatgtaataatgcattatc 8015857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 34921120 - 34921179
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataat 334  Q
    ||||||| |||||||||| |||||||| | ||| ||| ||||||||||||||||||||||    
T  34921120 cttataaggtgaataagtgggatgtcttgggttagaaccccgacccctgcatataataat 34921179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 42260734 - 42260789
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||||| ||||||| |||||||||| ||||| |||||||||||| |||||||    
T  42260734 gtgaataagtgggatgtccggagttcgaaacccgaaccctgcatataacaatgcat 42260789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 42618417 - 42618483
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||||||||| || | || ||  |||||| ||||||||||| |||||||||||||||    
T  42618417 atcttataaagtgaataagtggggtatccgggattcgaaccccgacccctgtatataataatgcatt 42618483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 19608680 - 19608639
Alignment:
Q  297 tgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||| |||||||||| ||||||||||||||||||||||||||    
T  19608680 tgtccggagttcgaaccccgacccctgcatataataatgcat 19608639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 25660991 - 25660938
Alignment:
Q  285 gaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    |||||||| || ||||||| |||||||||||| ||||||||||||| |||||||    
T  25660991 gaataagtggggtgtctggggttcgaatcccggcccctgcatataacaatgcat 25660938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 6447490 - 6447550
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || |||| |  ||||||| |||| ||||||||||||||||||||||    
T  6447490 taaagtgaataagtggggtgtccgaggttcgaaccccggcccctgcatataataatgcatt 6447550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 18872602 - 18872546
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||| || |||  || ||||||| |||||||||||||||||||||||||||    
T  18872602 gtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcatt 18872546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 32158420 - 32158484
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||  || ||||||| |||| ||||||||||||||||||||||    
T  32158420 cttataaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcatt 32158484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 33729867 - 33729803
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || ||||||   |||||| |||| ||||||||||||||||||||||    
T  33729867 cttataaggtgaataagtggggtgtctgagattcgaaccccggcccctgcatataataatgcatt 33729803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 37304019 - 37303959
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||||| || ||||  | ||||||| |||||||||||||||||||||| ||||    
T  37304019 taaagtgaataagtggggtgtccagggttcgaaccccgacccctgcatataataatacatt 37303959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 843375 - 843438
Alignment:
Q  276 ttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||| |||||||||| || |||| || ||||||| |||| ||||| ||||||||||||||||    
T  843375 ttataaggtgaataagtggggtgtccggggttcgaaccccgtcccctacatataataatgcatt 843438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 22599943 - 22600005
Alignment:
Q  276 ttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||| |||||||||| || ||||||| |||| |||||| |||| ||||||||||||||||||    
T  22599943 ttataaggtgaataagtggggtgtctggggttcaaatcccaaccc-tgcatataataatgcatt 22600005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 24651217 - 24651166
Alignment:
Q  283 gtgaataagttggatgtctggagttcgaatcccgacccctgcatataataat 334  Q
    |||||||||| ||||||||| |||||||| ||| |||||| |||||||||||    
T  24651217 gtgaataagtgggatgtctgaagttcgaaccccaacccctacatataataat 24651166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 6614042 - 6614108
Alignment:
Q  273 atcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||  ||||||||| || |||| |  ||||||| |||| ||||||||||||||||||||||    
T  6614042 atcttataagatgaataagtggggtgtccgaggttcgaaccccggcccctgcatataataatgcatt 6614108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 11246509 - 11246563
Alignment:
Q  284 tgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||||| |||||||||| ||| ||  |||||||||||||||||| |||||||    
T  11246509 tgaataagtgggatgtctggggtttgagccccgacccctgcatataacaatgcat 11246563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 269 - 339
Target Start/End: Complemental strand, 29841443 - 29841373
Alignment:
Q  269 atttatcttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||| ||||||| | |||||||| || |||| || ||||||||| || ||| ||||||||||||||||||    
T  29841443 atttaccttataaggggaataagtggggtgtccggggttcgaatctcggcccttgcatataataatgcatt 29841373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 305 - 338
Target Start/End: Original strand, 7147055 - 7147088
Alignment:
Q  305 gttcgaatcccgacccctgcatataataatgcat 338  Q
    ||||||| ||||||||||||||||||||||||||    
T  7147055 gttcgaaccccgacccctgcatataataatgcat 7147088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 337
Target Start/End: Original strand, 27278765 - 27278822
Alignment:
Q  280 aaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgca 337  Q
    ||||||||||| | || ||||||  ||||||| |||||||||| ||||||||||||||    
T  27278765 aaagtgaataaatggggtgtctgaggttcgaaccccgacccctacatataataatgca 27278822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 4412 - 4352
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatg 335  Q
    |||||||||||||||||| |  |||| || ||||||| |||||||||||||||||||||||    
T  4412 cttataaagtgaataagtggagtgtccggggttcgaaccccgacccctgcatataataatg 4352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 16154 - 16090
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| ||||||| || |||||||  |||| |||||||||||||||||||||    
T  16154 cttataaggtgaataagtaggatgtccggggttcgaactccgatccctgcatataataatgcatt 16090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1990 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 983 - 919
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||||||  |||||| |||  ||||||||||||||||||||||    
T  983 cttataaggtgaataagtggggtgtctgggattcgaaccccagcccctgcatataataatgcatt 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 7161 - 7101
Alignment:
Q  279 taaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    |||||||||||| | || |||| || ||||||| |||| ||||||||||||||||||||||    
T  7161 taaagtgaataaatggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 7101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 47323 - 47387
Alignment:
Q  275 cttataaagtgaataagttggatgtctggagttcgaatcccgacccctgcatataataatgcatt 339  Q
    ||||||| |||||||||| || |||||||  |||||| |||  ||||||||||||||||||||||    
T  47323 cttataaggtgaataagtggggtgtctgggattcgaaccccagcccctgcatataataatgcatt 47387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University