View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1318_low_73 (Length: 363)
Name: NF1318_low_73
Description: NF1318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1318_low_73 |
 | |
|
| [»] chr6 (13 HSPs) |
| |
|
Alignment Details
Target: chr6 (Bit Score: 322; Significance: 0; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 30 - 363
Target Start/End: Original strand, 23289768 - 23290101
Alignment:
| Q |
30 |
acaaccgtgtcaatgacagtagtcattaaagtcttgtctggtctgaaagcctcagcagcttctccagctgccctttgaatgtcttttgcttcagcggagg |
129 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23289768 |
acaaccgtgtcaatgccagtagtcattaaagtcttgtctggtctgaaagcctcagcggcttctccagctgccctttgaatgtcttttgcttcagcggagg |
23289867 |
T |
|
| Q |
130 |
caggaataggaagcctccacgccgagtctgcaaagttgagacaggcgtagcggcccctcaatgcaattgctgcaacgtcgtgtgcacgggcagccatctc |
229 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23289868 |
caggaataggaagcttccacgccgagtctgcaaagttgagacaggcgtagcggcccctcaatgcaattgctgcaacgtcgtgtgcacgggcagccatctc |
23289967 |
T |
|
| Q |
230 |
ggctgttgcaaaagtccctagccaaatcctagtcttcttatttggttccctcatttcacacacccatttatctaagttcctcttcctcacacctctatac |
329 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23289968 |
ggctgttgcaaaagtccctagccaaatcctagtcttcttatttggttccctcatttcacacacccatttatctaagttcctcttcctcacacctctatac |
23290067 |
T |
|
| Q |
330 |
accgggtggcgagtctccttaaacttcttcctcc |
363 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
23290068 |
accgggtggcgagtctccttaaacttcttcctcc |
23290101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 30 - 363
Target Start/End: Original strand, 23283455 - 23283788
Alignment:
| Q |
30 |
acaaccgtgtcaatgacagtagtcattaaagtcttgtctggtctgaaagcctcagcagcttctccagctgccctttgaatgtcttttgcttcagcggagg |
129 |
Q |
| |
|
||||| ||||||||| | |||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23283455 |
acaacggtgtcaatgtcgttagtcattaaagtcttgtctggtctgaaagcctcggcggcttctgcagctgccctttgaatgtcttttgcttcagcggagg |
23283554 |
T |
|
| Q |
130 |
caggaataggaagcctccacgccgagtctgcaaagttgagacaggcgtagcggcccctcaatgcaattgctgcaacgtcgtgtgcacgggcagccatctc |
229 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||| || ||||||||||| |
|
|
| T |
23283555 |
caggaataggaagcctccacaccgagtctgcaaagttgagacaggcatagcggccccttaatgccatggctgcaacgtcgtgtgctcgtgcagccatctc |
23283654 |
T |
|
| Q |
230 |
ggctgttgcaaaagtccctagccaaatcctagtcttcttatttggttccctcatttcacacacccatttatctaagttcctcttcctcacacctctatac |
329 |
Q |
| |
|
|| |||| ||||||||||||||||||||||||||| || || ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
23283655 |
agccgttggaaaagtccctagccaaatcctagtctttttgttgggttccctcatttcacaaacccatttatctaagttcctcttcctcacacccctatac |
23283754 |
T |
|
| Q |
330 |
accgggtggcgagtctccttaaacttcttcctcc |
363 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
23283755 |
accgggtggcgagtctccttaaacttcttcctcc |
23283788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 34 - 363
Target Start/End: Original strand, 23391241 - 23391570
Alignment:
| Q |
34 |
ccgtgtcaatgacagtagtcattaaagtcttgtctggtctgaaagcctcagcagcttctccagctgccctttgaatgtcttttgcttcagcggaggcagg |
133 |
Q |
| |
|
||||||||||| || |||| ||| |||||||||||||||||||||||||||| || | | |||| ||| |||| || |||||||| | || || |||||| |
|
|
| T |
23391241 |
ccgtgtcaatgtcattagtaattgaagtcttgtctggtctgaaagcctcagcggcctgtgcagccgccttttgtatatcttttgcctgagtggtggcagg |
23391340 |
T |
|
| Q |
134 |
aataggaagcctccacgccgagtctgcaaagttgagacaggcgtagcggcccctcaatgcaattgctgcaacgtcgtgtgcacgggcagccatctcggct |
233 |
Q |
| |
|
||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||| ||||| |||||||| || |
|
|
| T |
23391341 |
tatagggagccgccacgcggagtctgcaaagttgagacaggcgtagcggcccctcaatgccattgcggcaacatcatgtgctcgggctgccatctccgca |
23391440 |
T |
|
| Q |
234 |
gttgcaaaagtccctagccaaatcctagtcttcttatttggttccctcatttcacacacccatttatctaagttcctcttcctcacacctctatacaccg |
333 |
Q |
| |
|
|||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||| |
|
|
| T |
23391441 |
gttggaaaagtgcctagccaaattttagtcttcttatttggttccctcatttcacacacccatttatctaagtttcttttcctcacacccctatataccg |
23391540 |
T |
|
| Q |
334 |
ggtggcgagtctccttaaacttcttcctcc |
363 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |
|
|
| T |
23391541 |
ggtggcgagtctccttgaacttcttcctcc |
23391570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 49 - 363
Target Start/End: Original strand, 23586943 - 23587257
Alignment:
| Q |
49 |
tagtcattaaagtcttgtctggtctgaaagcctcagcagcttctccagctgccctttgaatgtcttttgcttcagcggaggcaggaataggaagcctcca |
148 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| || || ||| ||| ||| |||| || || ||||||| || | ||||| | || |||| ||| |
|
|
| T |
23586943 |
tagtcaataaagtcttgtctggtctgaaagcctcggcggcctctgtagcagccttttgtatatcctttgcttgagtagttgcaggtttggggagccgcca |
23587042 |
T |
|
| Q |
149 |
cgccgagtctgcaaagttgagacaggcgtagcggcccctcaatgcaattgctgcaacgtcgtgtgcacgggcagccatctcggctgttgcaaaagtccct |
248 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| |||||||| ||||||||||| |||| |||||||||| |
|
|
| T |
23587043 |
cgctgagtctgcaaagttgagacaagcgtagcggcccctcaatgccattgcagcaacatcgtgggcacgggctgccatctcggcagttggaaaagtccct |
23587142 |
T |
|
| Q |
249 |
agccaaatcctagtcttcttatttggttccctcatttcacacacccatttatctaagttcctcttcctcacacctctatacaccgggtggcgagtctcct |
348 |
Q |
| |
|
||||||||| |||||||||| || || |||||||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||||||||| |||| |
|
|
| T |
23587143 |
agccaaatcttagtcttcttgttaggctccctcatttcacaaacccatttatctaagttcctcttcctcactcctctatagactgggtggcgagtttcct |
23587242 |
T |
|
| Q |
349 |
taaacttcttcctcc |
363 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
23587243 |
tgaacttcttcctcc |
23587257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 52 - 363
Target Start/End: Original strand, 23257804 - 23258115
Alignment:
| Q |
52 |
tcattaaagtcttgtctggtctgaaagcctcagcagcttctccagctgccctttgaatgtcttttgcttcagcggaggcaggaataggaagcctccacgc |
151 |
Q |
| |
|
|||||||||||||||||||||| ||||| || |||||||| |||| ||| ||||||| |||||| | | | || ||||||||||| | |||| | |
|
|
| T |
23257804 |
tcattaaagtcttgtctggtctaaaagcttcggcagcttcagcagccgccttttgaatatcttttatcgcggaagttgctggaataggaaggcgccacac |
23257903 |
T |
|
| Q |
152 |
cgagtctgcaaagttgagacaggcgtagcggcccctcaatgcaattgctgcaacgtcgtgtgcacgggcagccatctcggctgttgcaaaagtccctagc |
251 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||| ||||| || ||||| ||||| |||| ||||| ||||||||| ||| |
|
|
| T |
23257904 |
cgagtctgcaaaattgagacaggcatagcggcccctcaatgccattgcggcaacatcgtgggctcgggctgccatttcgggtgttggaaaagtccccagc |
23258003 |
T |
|
| Q |
252 |
caaatcctagtcttcttatttggttccctcatttcacacacccatttatctaagttcctcttcctcacacctctatacaccgggtggcgagtctccttaa |
351 |
Q |
| |
|
|||||||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| | |
|
|
| T |
23258004 |
caaatcctggtctttgtgttgggttccctcatttcacacacccatttatctaagttcctcttcctcacacctctatacatcgggtggcgagtttccttga |
23258103 |
T |
|
| Q |
352 |
acttcttcctcc |
363 |
Q |
| |
|
| ||||||||| |
|
|
| T |
23258104 |
agatcttcctcc |
23258115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 132 - 363
Target Start/End: Original strand, 23266439 - 23266670
Alignment:
| Q |
132 |
ggaataggaagcctccacgccgagtctgcaaagttgagacaggcgtagcggcccctcaatgcaattgctgcaacgtcgtgtgcacgggcagccatctcgg |
231 |
Q |
| |
|
||||||||||||| |||| |||| |||||||| ||||||||||||||||| ||||||||||| || || ||||| ||||| || ||||| |||||||||| |
|
|
| T |
23266439 |
ggaataggaagccgccacaccgaatctgcaaaattgagacaggcgtagcgacccctcaatgccatcgcagcaacatcgtgggctcgggctgccatctcgg |
23266538 |
T |
|
| Q |
232 |
ctgttgcaaaagtccctagccaaatcctagtcttcttatttggttccctcatttcacacacccatttatctaagttcctcttcctcacacctctatacac |
331 |
Q |
| |
|
|||||| |||||| ||||||||||| ||||||||| | || ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
23266539 |
ctgttggaaaagttcctagccaaattctagtcttcgtgttgggttccctcatttcacaaacccatttatctaagttcctcttccttacacctctatacac |
23266638 |
T |
|
| Q |
332 |
cgggtggcgagtctccttaaacttcttcctcc |
363 |
Q |
| |
|
|||||||||||| ||||| || ||||||||| |
|
|
| T |
23266639 |
cgggtggcgagtttccttgaatatcttcctcc |
23266670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 49 - 363
Target Start/End: Original strand, 23583060 - 23583373
Alignment:
| Q |
49 |
tagtcattaaagtcttgtctggtctgaaagcctcagcagcttctccagctgccctttgaatgtcttttgcttcagcggaggcaggaataggaagcctcca |
148 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| || || ||| |||| ||| |||| || || ||||| | || | ||||| | || |||| ||| |
|
|
| T |
23583060 |
tagtcaataaagtcttgtctggtctgaaagccttggcggcctctgcagcagccttttgtatatcctttgcctgagtagttgcaggtttggggagccgcca |
23583159 |
T |
|
| Q |
149 |
cgccgagtctgcaaagttgagacaggcgtagcggcccctcaatgcaattgctgcaacgtcgtgtgcacgggcagccatctcggctgttgcaaaagtccct |
248 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||| ||||||| |||||||| || |||| |||||||||| |
|
|
| T |
23583160 |
tgctgagtctgcaaagttgagacaggcgtagcggccc-tcaatgccattgcagcaacatcgtgggcacgggttgccatctccgcagttggaaaagtccct |
23583258 |
T |
|
| Q |
249 |
agccaaatcctagtcttcttatttggttccctcatttcacacacccatttatctaagttcctcttcctcacacctctatacaccgggtggcgagtctcct |
348 |
Q |
| |
|
||||||||| |||||||||| || || | |||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| |
|
|
| T |
23583259 |
agccaaatcttagtcttcttgttaggcttcctcatttcacaaacccatttatctaagttcctcttccttacacccctatagaccgggtggcgagtctcct |
23583358 |
T |
|
| Q |
349 |
taaacttcttcctcc |
363 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
23583359 |
tgaacttcttcctcc |
23583373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 50 - 363
Target Start/End: Original strand, 23633978 - 23634291
Alignment:
| Q |
50 |
agtcattaaagtcttgtctggtctgaaagcctcagcagcttctccagctgccctttgaatgtcttttgcttcagcggaggcaggaataggaagcctccac |
149 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||||| |||| | | |||| || ||| ||| || | | ||||||||||||||||| | | |
|
|
| T |
23633978 |
agtcgttaaagtcttgtctggtctgaaagcctcggcagcttctgcagccgtcttttgtatatctcttgtctctgtagtggcaggaataggaagccgcgag |
23634077 |
T |
|
| Q |
150 |
gccgagtctgcaaagttgagacaggcgtagcggcccctcaatgcaattgctgcaacgtcgtgtgcacgggcagccatctcggctgttgcaaaagtcccta |
249 |
Q |
| |
|
|| ||||| ||||| || |||||||||| ||| || || ||||| | ||| || || || ||||| || || ||||||||||| |||| ||||||||||| |
|
|
| T |
23634078 |
gcagagtcagcaaaattaagacaggcgttgcgacctcttaatgccaatgccgcgacatcatgtgctcgtgctgccatctcggccgttggaaaagtcccta |
23634177 |
T |
|
| Q |
250 |
gccaaatcctagtcttcttatttggttccctcatttcacacacccatttatctaagttcctcttcctcacacctctatacaccgggtggcgagtctcctt |
349 |
Q |
| |
|
|||||||| |||||||||| || || |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||| |||||||| |
|
|
| T |
23634178 |
gccaaatcttagtcttcttgttaggctccctcatttcacacacccatttatctaagttcctcctcctcacacccctgtacaccgggtggcgtgtctcctt |
23634277 |
T |
|
| Q |
350 |
aaacttcttcctcc |
363 |
Q |
| |
|
||||||||||||| |
|
|
| T |
23634278 |
gaacttcttcctcc |
23634291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 30 - 363
Target Start/End: Original strand, 23251806 - 23252139
Alignment:
| Q |
30 |
acaaccgtgtcaatgacagtagtcattaaagtcttgtctggtctgaaagcctcagcagcttctccagctgccctttgaatgtcttttgcttcagcggagg |
129 |
Q |
| |
|
||||| ||||||||| || | ||||||||||| ||||||||||| ||||| || || |||| | ||||||| ||||||| |||||| | | | | |
|
|
| T |
23251806 |
acaacggtgtcaatgtcactggtcattaaagtattgtctggtctaaaagcttcggcggcttttgtagctgccttttgaatatcttttatcgcggaagttg |
23251905 |
T |
|
| Q |
130 |
caggaataggaagcctccacgccgagtctgcaaagttgagacaggcgtagcggcccctcaatgcaattgctgcaacgtcgtgtgcacgggcagccatctc |
229 |
Q |
| |
|
| ||||||||||| | |||| ||||||||||||| ||||||||||| ||||||||||||||||| || || ||||| ||||| || ||||| |||||||| |
|
|
| T |
23251906 |
ctggaataggaaggcgccacaccgagtctgcaaaattgagacaggcatagcggcccctcaatgctatcgcggcaacatcgtgggctcgggctgccatctc |
23252005 |
T |
|
| Q |
230 |
ggctgttgcaaaagtccctagccaaatcctagtcttcttatttggttccctcatttcacacacccatttatctaagttcctcttcctcacacctctatac |
329 |
Q |
| |
|
|||||||| |||||| ||||||||||||||| |||| | || || |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
23252006 |
ggctgttggaaaagttcctagccaaatcctattctttgtgttcggctccctcatttcacaaacccatttatttaagttcctcttcctcacacctctatag |
23252105 |
T |
|
| Q |
330 |
accgggtggcgagtctccttaaacttcttcctcc |
363 |
Q |
| |
|
|| ||||| ||||| |||||||| ||||||||| |
|
|
| T |
23252106 |
acagggtgacgagtttccttaaatatcttcctcc |
23252139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 49 - 363
Target Start/End: Original strand, 23247413 - 23247727
Alignment:
| Q |
49 |
tagtcattaaagtcttgtctggtctgaaagcctcagcagcttctccagctgccctttgaatgtcttttgcttcagcggaggcaggaataggaagcctcca |
148 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| || || |||| | ||||||| ||||||| |||||| | | | | || ||||||||||| | ||| |
|
|
| T |
23247413 |
tagtcattaaagtattgtctggtctaaaagcttcggccgcttttgtagctgccttttgaatatcttttattgcggaagttgctggaataggaaggcgcca |
23247512 |
T |
|
| Q |
149 |
cgccgagtctgcaaagttgagacaggcgtagcggcccctcaatgcaattgctgcaacgtcgtgtgcacgggcagccatctcggctgttgcaaaagtccct |
248 |
Q |
| |
|
| ||||||||| || ||||||||||| ||||||||||||||||| ||||| ||||| ||||| || |||||||||||||| | ||||| |||||| || |
|
|
| T |
23247513 |
caccgagtctgagaaattgagacaggcatagcggcccctcaatgccattgcagcaacatcgtgggctcgggcagccatctccggtgttggaaaagttccc |
23247612 |
T |
|
| Q |
249 |
agccaaatcctagtcttcttatttggttccctcatttcacacacccatttatctaagttcctcttcctcacacctctatacaccgggtggcgagtctcct |
348 |
Q |
| |
|
|||||||||||| |||| | || || |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
23247613 |
agccaaatcctattctttgtgttcggctccctcatttcacaaacccatttatttaagttcctcttcctcacacctctatagaccgggtggcgagtttcct |
23247712 |
T |
|
| Q |
349 |
taaacttcttcctcc |
363 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
23247713 |
taaatatcttcctcc |
23247727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 51 - 363
Target Start/End: Original strand, 23506799 - 23507111
Alignment:
| Q |
51 |
gtcattaaagtcttgtctggtctgaaagcctcagcagcttctccagctgccctttgaatgtcttttgcttcagcggaggcaggaataggaagcctccacg |
150 |
Q |
| |
|
||||||| ||||||| |||||||||| |||||||||||||| |||| | | |||| || ||||||| || | ||||||||||| ||| || | | |
|
|
| T |
23506799 |
gtcattacagtcttgcctggtctgaatgcctcagcagcttcagcagccgtcttttgtatatcttttgtctcgcaagtagcaggaatagggagcgtcaagg |
23506898 |
T |
|
| Q |
151 |
ccgagtctgcaaagttgagacaggcgtagcggcccctcaatgcaattgctgcaacgtcgtgtgcacgggcagccatctcggctgttgcaaaagtccctag |
250 |
Q |
| |
|
||||||||||||||||||||||||||| || || |||| || | ||| ||||| || || || || || |||||||||||||||| |||||| ||||| |
|
|
| T |
23506899 |
ccgagtctgcaaagttgagacaggcgtcgccacctttcaacgccagtgccgcaacatcatgggcccgagctgccatctcggctgttggaaaagttcctag |
23506998 |
T |
|
| Q |
251 |
ccaaatcctagtcttcttatttggttccctcatttcacacacccatttatctaagttcctcttcctcacacctctatacaccgggtggcgagtctcctta |
350 |
Q |
| |
|
||||||| | ||||| || || || | || |||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
23506999 |
ccaaatcttggtctttttgttaggctgtcttatttcacacacccatttatctaggttcctactcctcacacccctatacaccgggtggcgagtttccttg |
23507098 |
T |
|
| Q |
351 |
aacttcttcctcc |
363 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
23507099 |
aatttcttcctcc |
23507111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 128 - 358
Target Start/End: Original strand, 23594088 - 23594318
Alignment:
| Q |
128 |
ggcaggaataggaagcctccacgccgagtctgcaaagttgagacaggcgtagcggcccctcaatgcaattgctgcaacgtcgtgtgcacgggcagccatc |
227 |
Q |
| |
|
|||||||||| | |||| ||| || |||||||||||||||||||| ||||| | || |||||||| | || || || || || || || || ||||| |
|
|
| T |
23594088 |
ggcaggaataaggagccgccatgcagagtctgcaaagttgagacaagcgtaacaacctctcaatgccaatgtcgcgacatcatgggctcgtgcttccatc |
23594187 |
T |
|
| Q |
228 |
tcggctgttgcaaaagtccctagccaaatcctagtcttcttatttggttccctcatttcacacacccatttatctaagttcctcttcctcacacctctat |
327 |
Q |
| |
|
|| || ||| |||||| |||||||| ||| ||||| |||| || || |||||||||||||||||||||||| |||| ||||| |||||||||| |||| |
|
|
| T |
23594188 |
tcagccattggaaaagttcctagccatatcttagtcatcttgttaggctccctcatttcacacacccatttacctaaattcctactcctcacacccctat |
23594287 |
T |
|
| Q |
328 |
acaccgggtggcgagtctccttaaacttctt |
358 |
Q |
| |
|
| | |||||||| |||| |||| |||||||| |
|
|
| T |
23594288 |
agatcgggtggcaagtcaccttgaacttctt |
23594318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 23506635 - 23506763
Alignment:
| Q |
49 |
tagtcattaaagtcttgtctggtctgaaagcctcagcagcttctccagctgccctttgaatgtcttttgcttcagcggaggcaggaataggaagcctcca |
148 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| ||||||| |||| || |||| || ||| ||| || | ||||||||||||||||| | | |
|
|
| T |
23506635 |
tagtcgttaaagtcttgtctggtctgaaagcctcagtagcttctgcagccgcgttttgtatatctcttgtctctttagtggcaggaataggaagccgcga |
23506734 |
T |
|
| Q |
149 |
cgccgagtctgcaaagttgagacaggcgt |
177 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
23506735 |
ggccgagtctgcaaagttgagacaggcgt |
23506763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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