View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1318_low_82 (Length: 344)

Name: NF1318_low_82
Description: NF1318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1318_low_82
NF1318_low_82
[»] chr6 (26 HSPs)
chr6 (9-315)||(10902251-10902557)
chr6 (92-157)||(4494873-4494938)
chr6 (198-257)||(2578845-2578904)
chr6 (91-162)||(9677228-9677299)
chr6 (92-139)||(12204363-12204410)
chr6 (91-138)||(32053781-32053828)
chr6 (92-138)||(18256877-18256923)
chr6 (93-138)||(20744133-20744178)
chr6 (91-147)||(29069476-29069532)
chr6 (210-257)||(10074385-10074432)
chr6 (210-257)||(12071713-12071760)
chr6 (210-257)||(12085056-12085103)
chr6 (100-139)||(20720801-20720840)
chr6 (100-139)||(24212559-24212598)
chr6 (104-139)||(24623337-24623372)
chr6 (92-138)||(13496110-13496156)
chr6 (228-257)||(2578483-2578512)
chr6 (93-138)||(17382079-17382124)
chr6 (91-136)||(29740475-29740520)
chr6 (92-136)||(7927694-7927738)
chr6 (104-144)||(10053256-10053296)
chr6 (210-254)||(10073638-10073682)
chr6 (107-139)||(13158122-13158154)
chr6 (107-139)||(13162978-13163010)
chr6 (101-137)||(24827055-24827091)
chr6 (90-138)||(28231446-28231494)
[»] chr3 (42 HSPs)
chr3 (91-138)||(20537875-20537922)
chr3 (91-156)||(7827501-7827566)
chr3 (90-138)||(10498716-10498764)
chr3 (90-138)||(49975826-49975874)
chr3 (91-138)||(21331438-21331485)
chr3 (91-161)||(7829889-7829959)
chr3 (89-138)||(4216420-4216469)
chr3 (93-138)||(20370302-20370347)
chr3 (96-157)||(46483245-46483306)
chr3 (98-138)||(24428494-24428534)
chr3 (100-144)||(33404230-33404274)
chr3 (86-138)||(53996287-53996339)
chr3 (91-138)||(1149090-1149137)
chr3 (91-138)||(16980375-16980422)
chr3 (91-138)||(21506779-21506826)
chr3 (91-138)||(44579629-44579676)
chr3 (210-257)||(54017838-54017885)
chr3 (91-137)||(3612204-3612250)
chr3 (92-138)||(18870746-18870792)
chr3 (100-138)||(29631188-29631226)
chr3 (92-138)||(38387966-38388012)
chr3 (228-262)||(39389154-39389188)
chr3 (86-132)||(39481129-39481175)
chr3 (100-138)||(47039429-47039467)
chr3 (92-138)||(53162192-53162238)
chr3 (101-138)||(977962-977999)
chr3 (93-137)||(5925981-5926026)
chr3 (91-132)||(10617546-10617587)
chr3 (93-138)||(11508504-11508549)
chr3 (101-138)||(21549041-21549078)
chr3 (93-138)||(25340945-25340990)
chr3 (95-139)||(5117205-5117249)
chr3 (230-262)||(12114604-12114636)
chr3 (90-138)||(14894704-14894752)
chr3 (91-139)||(22462305-22462353)
chr3 (90-138)||(33745091-33745139)
chr3 (91-139)||(46903901-46903949)
chr3 (198-254)||(47964925-47964981)
chr3 (104-160)||(51402712-51402768)
chr3 (90-138)||(51882221-51882269)
chr3 (225-257)||(53596049-53596081)
chr3 (225-257)||(53596364-53596396)
[»] chr2 (44 HSPs)
chr2 (91-162)||(33063979-33064050)
chr2 (92-138)||(1861830-1861876)
chr2 (91-138)||(4122034-4122081)
chr2 (91-138)||(16877117-16877164)
chr2 (91-138)||(16989248-16989295)
chr2 (91-138)||(27244650-27244697)
chr2 (91-138)||(31543005-31543052)
chr2 (92-138)||(9383230-9383276)
chr2 (88-138)||(20455881-20455931)
chr2 (88-138)||(22523033-22523083)
chr2 (92-157)||(7201501-7201566)
chr2 (93-138)||(10195683-10195728)
chr2 (93-138)||(10332296-10332341)
chr2 (209-257)||(6421820-6421868)
chr2 (92-136)||(44526122-44526166)
chr2 (95-138)||(9519735-9519778)
chr2 (91-138)||(22571886-22571933)
chr2 (91-138)||(27411085-27411132)
chr2 (100-139)||(28202299-28202338)
chr2 (91-138)||(39068729-39068776)
chr2 (92-138)||(2256965-2257011)
chr2 (93-139)||(3196555-3196601)
chr2 (211-257)||(6421715-6421761)
chr2 (103-137)||(7262811-7262845)
chr2 (93-135)||(19967413-19967455)
chr2 (104-138)||(25186263-25186297)
chr2 (104-138)||(29734697-29734731)
chr2 (100-146)||(34191321-34191367)
chr2 (92-138)||(34977198-34977244)
chr2 (92-166)||(41187450-41187524)
chr2 (101-138)||(7350549-7350586)
chr2 (101-138)||(9547430-9547467)
chr2 (209-254)||(33954283-33954328)
chr2 (89-138)||(44694679-44694728)
chr2 (210-254)||(3672793-3672837)
chr2 (91-139)||(4238752-4238800)
chr2 (91-139)||(5028849-5028897)
chr2 (103-139)||(5397910-5397946)
chr2 (211-255)||(7598692-7598736)
chr2 (91-139)||(8761584-8761632)
chr2 (91-139)||(17736786-17736834)
chr2 (94-138)||(34464430-34464474)
chr2 (101-157)||(41668658-41668714)
chr2 (90-138)||(42791287-42791335)
[»] chr7 (47 HSPs)
chr7 (90-138)||(35142170-35142218)
chr7 (211-262)||(34218057-34218108)
chr7 (92-138)||(10244721-10244767)
chr7 (211-257)||(30244359-30244405)
chr7 (92-138)||(39801700-39801746)
chr7 (91-137)||(48980480-48980526)
chr7 (92-137)||(5526719-5526764)
chr7 (209-262)||(21619066-21619119)
chr7 (91-139)||(21597673-21597721)
chr7 (210-257)||(6054649-6054696)
chr7 (210-257)||(7517669-7517716)
chr7 (91-138)||(8683063-8683110)
chr7 (91-138)||(11893127-11893174)
chr7 (91-138)||(19416507-19416554)
chr7 (91-134)||(20243248-20243291)
chr7 (91-138)||(27462457-27462504)
chr7 (91-138)||(39926559-39926606)
chr7 (95-138)||(40762228-40762271)
chr7 (91-134)||(44473335-44473378)
chr7 (91-145)||(8227342-8227396)
chr7 (91-145)||(20205815-20205869)
chr7 (95-161)||(31885943-31886009)
chr7 (92-134)||(49063783-49063825)
chr7 (93-138)||(3953436-3953481)
chr7 (92-137)||(26825419-26825464)
chr7 (101-162)||(35751368-35751429)
chr7 (103-159)||(36448742-36448799)
chr7 (228-257)||(37533404-37533433)
chr7 (89-138)||(37624534-37624583)
chr7 (91-132)||(38728201-38728242)
chr7 (100-137)||(38841989-38842026)
chr7 (93-138)||(41527555-41527600)
chr7 (100-137)||(42043088-42043125)
chr7 (104-157)||(45200199-45200252)
chr7 (91-135)||(8883546-8883590)
chr7 (230-262)||(9901727-9901759)
chr7 (230-262)||(14681594-14681626)
chr7 (92-132)||(30781446-30781486)
chr7 (91-131)||(31038550-31038590)
chr7 (91-139)||(32228432-32228480)
chr7 (91-139)||(34448630-34448678)
chr7 (90-138)||(42829255-42829303)
chr7 (103-139)||(43346584-43346620)
chr7 (91-139)||(43498481-43498529)
chr7 (91-139)||(43539124-43539172)
chr7 (94-138)||(44558795-44558839)
chr7 (95-139)||(48069857-48069901)
[»] chr1 (40 HSPs)
chr1 (92-156)||(10480708-10480772)
chr1 (91-138)||(42045393-42045440)
chr1 (92-138)||(24324421-24324467)
chr1 (92-138)||(26755610-26755656)
chr1 (92-138)||(27449466-27449512)
chr1 (92-138)||(44641521-44641567)
chr1 (90-139)||(3693816-3693865)
chr1 (91-138)||(1794589-1794636)
chr1 (210-257)||(14318956-14319003)
chr1 (92-139)||(15602197-15602244)
chr1 (91-134)||(24752673-24752716)
chr1 (91-138)||(45140027-45140074)
chr1 (91-138)||(52441532-52441579)
chr1 (93-139)||(2613717-2613763)
chr1 (100-138)||(8253741-8253779)
chr1 (92-138)||(16826348-16826394)
chr1 (100-138)||(16967215-16967253)
chr1 (92-138)||(21400044-21400090)
chr1 (92-138)||(25532967-25533013)
chr1 (211-257)||(26661545-26661591)
chr1 (92-138)||(26803472-26803518)
chr1 (92-138)||(48681954-48682000)
chr1 (92-137)||(2884470-2884515)
chr1 (100-137)||(10841902-10841939)
chr1 (92-137)||(13096890-13096935)
chr1 (92-137)||(17139539-17139584)
chr1 (90-139)||(38341213-38341262)
chr1 (84-137)||(50372383-50372436)
chr1 (91-139)||(13590103-13590151)
chr1 (88-140)||(15729420-15729472)
chr1 (90-138)||(16033471-16033519)
chr1 (210-262)||(24600336-24600388)
chr1 (91-139)||(26834513-26834561)
chr1 (91-139)||(29701340-29701388)
chr1 (91-139)||(30678833-30678881)
chr1 (230-262)||(32594758-32594790)
chr1 (91-139)||(39252277-39252325)
chr1 (91-139)||(40268203-40268251)
chr1 (91-139)||(43840345-43840393)
chr1 (93-137)||(51127912-51127956)
[»] scaffold0350 (1 HSPs)
scaffold0350 (103-162)||(1253-1312)
[»] chr8 (32 HSPs)
chr8 (103-162)||(6038272-6038331)
chr8 (92-138)||(27718915-27718961)
chr8 (91-158)||(574377-574444)
chr8 (91-138)||(13286124-13286171)
chr8 (91-138)||(23852904-23852951)
chr8 (91-138)||(33451370-33451417)
chr8 (91-138)||(39821877-39821924)
chr8 (91-138)||(42200683-42200730)
chr8 (92-139)||(44293569-44293616)
chr8 (92-138)||(6314344-6314390)
chr8 (228-262)||(9483227-9483261)
chr8 (92-138)||(11708980-11709026)
chr8 (92-138)||(13357462-13357508)
chr8 (92-138)||(19163557-19163603)
chr8 (100-138)||(30427733-30427771)
chr8 (91-161)||(40401586-40401656)
chr8 (91-157)||(42367722-42367788)
chr8 (230-264)||(45122099-45122133)
chr8 (92-157)||(7433134-7433199)
chr8 (93-138)||(8717496-8717541)
chr8 (91-132)||(15310315-15310356)
chr8 (91-132)||(15490684-15490725)
chr8 (93-138)||(17704008-17704053)
chr8 (92-149)||(32223889-32223946)
chr8 (91-132)||(34997451-34997492)
chr8 (96-137)||(40167320-40167361)
chr8 (103-139)||(13272542-13272578)
chr8 (221-257)||(18371694-18371730)
chr8 (90-138)||(19778057-19778105)
chr8 (209-257)||(20995437-20995485)
chr8 (90-138)||(38763536-38763584)
chr8 (92-144)||(40316850-40316902)
[»] chr5 (38 HSPs)
chr5 (100-139)||(22394037-22394076)
chr5 (91-138)||(37932323-37932370)
chr5 (95-138)||(39610362-39610405)
chr5 (91-137)||(10199012-10199058)
chr5 (92-138)||(40715970-40716016)
chr5 (89-138)||(6488998-6489047)
chr5 (89-138)||(28207123-28207172)
chr5 (210-257)||(624285-624332)
chr5 (91-138)||(6624769-6624816)
chr5 (91-138)||(9893692-9893739)
chr5 (91-138)||(19248472-19248519)
chr5 (91-138)||(22522822-22522869)
chr5 (100-139)||(26409255-26409294)
chr5 (92-139)||(29695009-29695056)
chr5 (91-138)||(34436844-34436891)
chr5 (91-138)||(42505865-42505912)
chr5 (92-138)||(5485180-5485226)
chr5 (95-161)||(8544987-8545053)
chr5 (92-138)||(15889405-15889451)
chr5 (100-138)||(16076433-16076471)
chr5 (92-138)||(24485693-24485739)
chr5 (100-138)||(25604021-25604059)
chr5 (92-138)||(32200468-32200514)
chr5 (92-138)||(36321515-36321561)
chr5 (91-148)||(27721686-27721743)
chr5 (91-148)||(32559297-32559354)
chr5 (89-138)||(33645710-33645759)
chr5 (221-262)||(36522270-36522311)
chr5 (92-137)||(40730217-40730262)
chr5 (91-139)||(689540-689588)
chr5 (103-139)||(16188829-16188865)
chr5 (103-139)||(16188931-16188967)
chr5 (91-139)||(17239401-17239449)
chr5 (93-137)||(20175720-20175764)
chr5 (95-139)||(23118071-23118115)
chr5 (91-139)||(32565517-32565565)
chr5 (210-262)||(35150090-35150142)
chr5 (229-257)||(42405637-42405665)
[»] chr4 (48 HSPs)
chr4 (91-138)||(2186354-2186401)
chr4 (91-138)||(19332322-19332369)
chr4 (91-138)||(36203229-36203276)
chr4 (91-138)||(52270051-52270098)
chr4 (95-157)||(6459926-6459988)
chr4 (92-138)||(22040644-22040690)
chr4 (88-138)||(26033265-26033315)
chr4 (92-138)||(39171391-39171437)
chr4 (92-138)||(43374293-43374339)
chr4 (92-149)||(9539203-9539260)
chr4 (89-138)||(11949784-11949833)
chr4 (89-138)||(38453256-38453305)
chr4 (210-262)||(36608681-36608733)
chr4 (92-139)||(2932117-2932164)
chr4 (91-138)||(7230273-7230320)
chr4 (91-138)||(12698590-12698637)
chr4 (91-138)||(16743305-16743352)
chr4 (91-138)||(21318274-21318321)
chr4 (91-138)||(24665012-24665059)
chr4 (91-138)||(30051888-30051935)
chr4 (91-138)||(35021488-35021535)
chr4 (211-254)||(43174233-43174276)
chr4 (91-138)||(50362160-50362207)
chr4 (91-138)||(56565004-56565051)
chr4 (92-138)||(9946421-9946467)
chr4 (101-139)||(10204843-10204881)
chr4 (91-157)||(11198757-11198823)
chr4 (92-138)||(12322667-12322713)
chr4 (100-138)||(19854567-19854605)
chr4 (100-138)||(20383490-20383528)
chr4 (92-138)||(20799415-20799461)
chr4 (92-138)||(23809943-23809989)
chr4 (92-138)||(43034363-43034409)
chr4 (92-138)||(46745184-46745230)
chr4 (108-162)||(54587910-54587964)
chr4 (92-137)||(16432979-16433024)
chr4 (89-138)||(23304037-23304086)
chr4 (92-157)||(32180824-32180889)
chr4 (99-136)||(39146643-39146680)
chr4 (91-139)||(9221951-9221999)
chr4 (93-137)||(14136086-14136130)
chr4 (91-139)||(14202499-14202547)
chr4 (90-138)||(31879898-31879946)
chr4 (91-139)||(36478984-36479032)
chr4 (91-139)||(43722758-43722806)
chr4 (230-262)||(45496889-45496921)
chr4 (90-138)||(49473637-49473685)
chr4 (230-262)||(50002510-50002542)
[»] scaffold0118 (1 HSPs)
scaffold0118 (95-138)||(39995-40038)
[»] scaffold0040 (1 HSPs)
scaffold0040 (91-138)||(56777-56824)
[»] scaffold0011 (1 HSPs)
scaffold0011 (91-138)||(185256-185303)
[»] scaffold0122 (1 HSPs)
scaffold0122 (93-138)||(31176-31221)
[»] scaffold0009 (1 HSPs)
scaffold0009 (100-137)||(17727-17764)
[»] scaffold1327 (1 HSPs)
scaffold1327 (91-139)||(549-597)
[»] scaffold0135 (1 HSPs)
scaffold0135 (91-139)||(32604-32652)
[»] scaffold0038 (1 HSPs)
scaffold0038 (90-138)||(31943-31991)
[»] scaffold0017 (1 HSPs)
scaffold0017 (95-139)||(35948-35992)
[»] scaffold0007 (1 HSPs)
scaffold0007 (100-132)||(244481-244513)


Alignment Details
Target: chr6 (Bit Score: 259; Significance: 1e-144; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 9 - 315
Target Start/End: Original strand, 10902251 - 10902557
Alignment:
Q  9 caataatatcactgacgtacggccaaaaaataaaactatagcacatatctaaaaataataggttgttgtttatcaattggtgtgtcctcgcgagcttagc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10902251 caataatatcactgacgtacggccaaaaaataaaactatagcacatatctaaaaataataggttgttgtttatcaattggtgtgtcctcgcgagcttagc 10902350  T
Q  109 tcagatgatatggacaatgcataatatatgtgaagtctggaattcgaactccggtcacatctggtttgttcattattaaaataaatattcacatctaagt 208  Q
    ||||||||||||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||    
T  10902351 tcagatgatatggacaatgcataatatatgtaaagtttggagttcgaactccggccacatctggtttgttcattattaaaataaatatccacatctaggt 10902450  T
Q  209 cagaacaaccatacaaatgaaagagacaccacactcttacccaaaacctgaagaaagacatcgacatcatattttacaaatgagtcactcgttacaaggc 308  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| || |||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  10902451 cagaacaaccatacaagtgagagagacaccacactcttacccaaaatctaaagagagacatcgacatcatgttttacaaatgagtcactcgttacaaggc 10902550  T
Q  309 aaataat 315  Q
    |||||||    
T  10902551 aaataat 10902557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 4494938 - 4494873
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaac 157  Q
    ||||||| ||||||||||||| || |||||||||||||||| ||||| || |||||| ||||||||    
T  4494938 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcgaggtctgggattcgaac 4494873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 2578845 - 2578904
Alignment:
Q  198 cacatctaagtcagaacaaccatacaaatgaaagagacaccacactcttacccaaaacct 257  Q
    |||||| | ||||||||||||| ||||   ||||||||||||||||||||||||||||||    
T  2578845 cacatcgaggtcagaacaaccacacaagcaaaagagacaccacactcttacccaaaacct 2578904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 9677228 - 9677299
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaactccgg 162  Q
    |||||||| ||||||||||||| || | ||||||||||||||||||||  || ||||| |||| ||||||||    
T  9677228 tgtcctcgtgagcttagctcagttggtttggacaatgcataatatatgaaaaatctgggattcaaactccgg 9677299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 12204363 - 12204410
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  12204363 gtcctcgtgagcatagctcagttgatatggacaatgcataatatatgt 12204410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 32053781 - 32053828
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||    
T  32053781 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 32053828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 18256877 - 18256923
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  18256877 gtcctcgtgagcttagctcagttgataaggacaatgcataatatatg 18256923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 20744133 - 20744178
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||    
T  20744133 tcctcgtgagcttagctcagttggtatggacaatgcataatatatg 20744178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 29069476 - 29069532
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctg 147  Q
    |||| ||| ||||||||||||| ||||| |||||||||||||||||||  |||||||    
T  29069476 tgtcatcgtgagcttagctcagttgatagggacaatgcataatatatgaaaagtctg 29069532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 10074385 - 10074432
Alignment:
Q  210 agaacaaccatacaaatgaaagagacaccacactcttacccaaaacct 257  Q
    |||||||||| || | ||| ||||||||||||||||||||||||||||    
T  10074385 agaacaaccacactagtgagagagacaccacactcttacccaaaacct 10074432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 12071713 - 12071760
Alignment:
Q  210 agaacaaccatacaaatgaaagagacaccacactcttacccaaaacct 257  Q
    |||||||||| |||| ||| |||||| |||||||||||||||||||||    
T  12071713 agaacaaccacacaagtgagagagacgccacactcttacccaaaacct 12071760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 12085056 - 12085103
Alignment:
Q  210 agaacaaccatacaaatgaaagagacaccacactcttacccaaaacct 257  Q
    |||||||||| |||| ||| |||||| |||||||||||||||||||||    
T  12085056 agaacaaccacacaagtgagagagacgccacactcttacccaaaacct 12085103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 139
Target Start/End: Complemental strand, 20720840 - 20720801
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  20720840 gagcttagctcagttgttatggacaatgcataatatatgt 20720801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 139
Target Start/End: Complemental strand, 24212598 - 24212559
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  24212598 gagcttaactcagttgatatggacaatgcataatatatgt 24212559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 24623372 - 24623337
Alignment:
Q  104 ttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||||||| ||||||||||||||||||||||||||    
T  24623372 ttagctcagttgatatggacaatgcataatatatgt 24623337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 13496110 - 13496156
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||| ||||| ||||||| |||||||||||||||||    
T  13496110 gtcctcgtgagcttaactcagttgatatgaacaatgcataatatatg 13496156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 257
Target Start/End: Original strand, 2578483 - 2578512
Alignment:
Q  228 aaagagacaccacactcttacccaaaacct 257  Q
    ||||||||||||||||||||||||||||||    
T  2578483 aaagagacaccacactcttacccaaaacct 2578512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 17382079 - 17382124
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| ||||||||||||| || ||||||||||| ||||||||||    
T  17382079 tcctcgtgagcttagctcagttggtatggacaatgtataatatatg 17382124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 29740475 - 29740520
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatata 136  Q
    |||||||| ||||||||||||  || ||||||||||||||||||||    
T  29740475 tgtcctcgtgagcttagctcaattggtatggacaatgcataatata 29740520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 7927694 - 7927738
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatata 136  Q
    ||||||| |||||||| |||| ||||| |||||||||||||||||    
T  7927694 gtcctcgtgagcttagttcagttgatagggacaatgcataatata 7927738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 10053256 - 10053296
Alignment:
Q  104 ttagctcagatgatatggacaatgcataatatatgtgaagt 144  Q
    ||||||||| || ||||||||||||||||||||||| ||||    
T  10053256 ttagctcagttggtatggacaatgcataatatatgtaaagt 10053296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 10073638 - 10073682
Alignment:
Q  210 agaacaaccatacaaatgaaagagacaccacactcttacccaaaa 254  Q
    |||||||||| || | ||| |||||||||||||||||||||||||    
T  10073638 agaacaaccacactagtgagagagacaccacactcttacccaaaa 10073682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 139
Target Start/End: Original strand, 13158122 - 13158154
Alignment:
Q  107 gctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||||||||||| ||||||||||||||||    
T  13158122 gctcagatgatatggataatgcataatatatgt 13158154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 139
Target Start/End: Original strand, 13162978 - 13163010
Alignment:
Q  107 gctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||||||||||| ||||||||||||||||    
T  13162978 gctcagatgatatggataatgcataatatatgt 13163010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 24827055 - 24827091
Alignment:
Q  101 agcttagctcagatgatatggacaatgcataatatat 137  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  24827055 agcttagctcagttgatatggacaatgcataaaatat 24827091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 28231494 - 28231446
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| | |||||| |||||| ||||| |||||||||||||||||||    
T  28231494 gtgtcctagtgagcttggctcagttgatagggacaatgcataatatatg 28231446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 20537875 - 20537922
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  20537875 tgtcctcgcgagcttagctcagttgatatggacaatgcataatatatg 20537922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 7827501 - 7827566
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaa 156  Q
    |||||||| ||| ||| ||||| |||||||||||||||||||||||||| | ||||||| ||||||    
T  7827501 tgtcctcgtgagtttaactcagttgatatggacaatgcataatatatgtaaggtctggagttcgaa 7827566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 10498764 - 10498716
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  10498764 gtgtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 10498716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 49975874 - 49975826
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||||||    
T  49975874 gtgtcctcgcgagcttaactcagttgttatggacaatgcataatatatg 49975826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 21331485 - 21331438
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||    
T  21331485 tgtcctcgtgagcttagctcagttgttatggacaatgcataatatatg 21331438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 7829889 - 7829959
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaactccg 161  Q
    |||||||| ||| ||| ||||| |||||||||||||||||||||||||| | ||||| | |||||| ||||    
T  7829889 tgtcctcgtgagtttaactcagttgatatggacaatgcataatatatgtaaggtctgaagttcgaaatccg 7829959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 4216469 - 4216420
Alignment:
Q  89 tgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||| || |||||||||| ||||| |||||||||||||||||||    
T  4216469 tgtgtcctcgtgaacttagctcagttgataaggacaatgcataatatatg 4216420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 20370347 - 20370302
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| ||||||||||||| ||||||||||||||||||| |||||    
T  20370347 tcctcgtgagcttagctcagttgatatggacaatgcataaaatatg 20370302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 157
Target Start/End: Original strand, 46483245 - 46483306
Alignment:
Q  96 tcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaac 157  Q
    |||||||||||||| || || ||||||||||||||||||||||  ||||| ||| |||||||    
T  46483245 tcgcgagcttagcttagttggtatggacaatgcataatatatgcaaagtccggagttcgaac 46483306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 24428534 - 24428494
Alignment:
Q  98 gcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  24428534 gcgagcttagctcagttggtatggacaatgcataatatatg 24428494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 33404230 - 33404274
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatgtgaagt 144  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||    
T  33404230 gagcttagctcagttgatatggacaatacataatatatgtaaagt 33404274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 53996287 - 53996339
Alignment:
Q  86 tggtgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||| |||||| | ||||||||||||| || ||||||||||||||||||||||    
T  53996287 tggtttgtccttgtgagcttagctcagttggtatggacaatgcataatatatg 53996339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 1149137 - 1149090
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || || |||||||||||||||||||    
T  1149137 tgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatg 1149090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 16980422 - 16980375
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || || |||||||||||||||||||    
T  16980422 tgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatg 16980375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 21506826 - 21506779
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||    
T  21506826 tgtcctcgtgagcttagctcagttggtatggacaatgcataaaatatg 21506779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 44579629 - 44579676
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||    
T  44579629 tgtcctcgtgagcttagctcagttggtatggacaatgcataaaatatg 44579676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 54017838 - 54017885
Alignment:
Q  210 agaacaaccatacaaatgaaagagacaccacactcttacccaaaacct 257  Q
    |||||||||| |||| | | ||||||||||||||||||||||||||||    
T  54017838 agaacaaccacacaagtaagagagacaccacactcttacccaaaacct 54017885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 3612250 - 3612204
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    |||||| | ||||||||||||| ||||||||| ||||||||||||||    
T  3612250 tgtccttgtgagcttagctcagttgatatggataatgcataatatat 3612204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 18870792 - 18870746
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||    
T  18870792 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatg 18870746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 29631188 - 29631226
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  29631188 gagcttagctcagttggtatggacaatgcataatatatg 29631226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 38387966 - 38388012
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| |||||  ||||||||||||||||||    
T  38387966 gtcctcgtgagcttagctcagttgatagtgacaatgcataatatatg 38388012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 262
Target Start/End: Complemental strand, 39389188 - 39389154
Alignment:
Q  228 aaagagacaccacactcttacccaaaacctgaaga 262  Q
    |||||||||||||||||||||||||||||| ||||    
T  39389188 aaagagacaccacactcttacccaaaaccttaaga 39389154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 39481129 - 39481175
Alignment:
Q  86 tggtgtgtcctcgcgagcttagctcagatgatatggacaatgcataa 132  Q
    |||| |||||||| ||||||||||||| || ||||||||||||||||    
T  39481129 tggtatgtcctcgtgagcttagctcagttggtatggacaatgcataa 39481175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 47039429 - 47039467
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  47039429 gagcttaactcagatgataaggacaatgcataatatatg 47039467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 53162192 - 53162238
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  53162192 gtcctcgtgagcttagctcaattgatatggacaatgcataaaatatg 53162238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 977999 - 977962
Alignment:
Q  101 agcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||||| || ||||||||||||||||||||||    
T  977999 agcttagctcagttggtatggacaatgcataatatatg 977962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 5926026 - 5925981
Alignment:
Q  93 tcctcgcgagcttagctcaga-tgatatggacaatgcataatatat 137  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  5926026 tcctcgcgagcttagttcagactgatatggacaattcataatatat 5925981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 10617546 - 10617587
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataa 132  Q
    |||||||| ||||||||||||| ||||||||| |||||||||    
T  10617546 tgtcctcgtgagcttagctcagttgatatggataatgcataa 10617587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 11508549 - 11508504
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| ||||||||||| | ||||||||||||||||| |||||||    
T  11508549 tcctcgtgagcttagctcggttgatatggacaatgcatgatatatg 11508504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 21549041 - 21549078
Alignment:
Q  101 agcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  21549041 agcttagctcagttgatatggacaatgtataatatatg 21549078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 25340990 - 25340945
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| ||||||||||||| || |||||||||||||||| |||||    
T  25340990 tcctcgtgagcttagctcagttggtatggacaatgcataaaatatg 25340945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 5117205 - 5117249
Alignment:
Q  95 ctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||| ||||||||||||| ||||| ||||||| ||||||||||||    
T  5117205 ctcgtgagcttagctcagttgataaggacaatacataatatatgt 5117249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 12114604 - 12114636
Alignment:
Q  230 agagacaccacactcttacccaaaacctgaaga 262  Q
    |||||||||||||||||||||||||||| ||||    
T  12114604 agagacaccacactcttacccaaaaccttaaga 12114636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 14894704 - 14894752
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||| |||| |||||||| |  ||||||||||||||||||||||    
T  14894704 gtgtcctcgtgagcgtagctcagttactatggacaatgcataatatatg 14894752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 22462305 - 22462353
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||| || ||||||| ||||| ||||| ||||||||||||||||||||    
T  22462305 tgtccccgtgagcttaactcagttgataaggacaatgcataatatatgt 22462353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 33745091 - 33745139
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| || ||||||||||||  ||||||||||||||||||| |||||    
T  33745091 gtgtccccgtgagcttagctcaattgatatggacaatgcataaaatatg 33745139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 46903901 - 46903949
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||| ||| ||||| || |||||||||||||||||||||||    
T  46903901 tgtcctcgtgagattaactcagttggtatggacaatgcataatatatgt 46903949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 47964925 - 47964981
Alignment:
Q  198 cacatctaagtcagaacaaccatacaaatgaaagagacaccacactcttacccaaaa 254  Q
    |||||||| | |||||||| |||| || ||| |||||| ||||||||||||||||||    
T  47964925 cacatctaggccagaacaatcatataagtgagagagacgccacactcttacccaaaa 47964981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 51402768 - 51402712
Alignment:
Q  104 ttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaactcc 160  Q
    ||||||||| ||||||||||||||||||||| |||  | ||||||  ||||||||||    
T  51402768 ttagctcagttgatatggacaatgcataatacatgcaacgtctggggttcgaactcc 51402712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 51882269 - 51882221
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| || ||||||| ||||| || ||||||||||||||||||||||    
T  51882269 gtgtccccgtgagcttaactcagttggtatggacaatgcataatatatg 51882221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 257
Target Start/End: Complemental strand, 53596081 - 53596049
Alignment:
Q  225 atgaaagagacaccacactcttacccaaaacct 257  Q
    |||| ||||||||||||||||||||||||||||    
T  53596081 atgagagagacaccacactcttacccaaaacct 53596049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 257
Target Start/End: Complemental strand, 53596396 - 53596364
Alignment:
Q  225 atgaaagagacaccacactcttacccaaaacct 257  Q
    |||| ||||||||||||||||||||||||||||    
T  53596396 atgagagagacaccacactcttacccaaaacct 53596364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 33063979 - 33064050
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaactccgg 162  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||  | ||| ||| ||||||||||||    
T  33063979 tgtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttcgaactccgg 33064050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 1861876 - 1861830
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||    
T  1861876 gtcctcgtgagcttagctcagctgatatggacaatgcataatatatg 1861830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 4122081 - 4122034
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||    
T  4122081 tgtcctcgtgagcttagctcagctggtatggacaatgcataatatatg 4122034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 16877117 - 16877164
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||    
T  16877117 tgtcctcgtgagcttagctcagctggtatggacaatgcataatatatg 16877164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 16989248 - 16989295
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||    
T  16989248 tgtcctcgtgagcttagctcagctggtatggacaatgcataatatatg 16989295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 27244650 - 27244697
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  27244650 tgtcctcgtgagcttagctcagttgatagggacaatgcataatatatg 27244697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 31543005 - 31543052
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| |||||||||||||||| |||||| |||||||||||||||    
T  31543005 tgtcctcgtgagcttagctcagatggtatggataatgcataatatatg 31543052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 9383276 - 9383230
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||    
T  9383276 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 9383230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 20455881 - 20455931
Alignment:
Q  88 gtgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||||| ||||||||||||  || ||||||||||||||||||||||    
T  20455881 gtgtgtcctcgtgagcttagctcaattggtatggacaatgcataatatatg 20455931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 22523083 - 22523033
Alignment:
Q  88 gtgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||||| ||||||||||||| || |||||||||| |||||||||||    
T  22523083 gtgtgtcctcgtgagcttagctcagttggtatggacaatacataatatatg 22523033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 7201501 - 7201566
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaac 157  Q
    ||||||| ||||||||||||| || | || |||||||||||||||||  ||||||||| |||||||    
T  7201501 gtcctcgtgagcttagctcagttggtttgaacaatgcataatatatgcaaagtctggagttcgaac 7201566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 10195728 - 10195683
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||    
T  10195728 tcctcgtgagcttagctcagttgatatggataatgcataatatatg 10195683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 10332341 - 10332296
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||    
T  10332341 tcctcgtgagcttagctcagttgataaggacaatgcataatatatg 10332296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 6421868 - 6421820
Alignment:
Q  209 cagaacaaccatacaaatgaaagagacaccacactcttacccaaaacct 257  Q
    ||||||||||| |||| | | ||||||||||||||||||||||||||||    
T  6421868 cagaacaaccacacaagttagagagacaccacactcttacccaaaacct 6421820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 44526122 - 44526166
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatata 136  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||    
T  44526122 gtcctcgtgagcttagctcagttggtatggacaatgcataatata 44526166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 9519778 - 9519735
Alignment:
Q  95 ctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||| ||||||||||||  |||||||||||||||||||||||||    
T  9519778 ctcgtgagcttagctcaattgatatggacaatgcataatatatg 9519735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 22571933 - 22571886
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| || |||||||||| |||||| ||||||||||||||||||    
T  22571933 tgtcctcgtgaacttagctcagttgatatagacaatgcataatatatg 22571886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 27411085 - 27411132
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| ||||||||||  |||||||||||||    
T  27411085 tgtcctcgtgagcttagctcagttgatatggaccttgcataatatatg 27411132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 139
Target Start/End: Original strand, 28202299 - 28202338
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  28202299 gagcttagctcagttgatagggacaatgcataatatatgt 28202338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 39068776 - 39068729
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||| || ||||||||||||| ||||| |||||||||||||||||||    
T  39068776 tgtccacgtgagcttagctcagttgataaggacaatgcataatatatg 39068729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 2256965 - 2257011
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||| ||||| || ||||||||||||||||||||||    
T  2256965 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatg 2257011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 3196555 - 3196601
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||| |||||| |||||| ||||||| ||||||||||||||||||    
T  3196555 tcctcgtgagctttgctcagttgatatgaacaatgcataatatatgt 3196601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 6421761 - 6421715
Alignment:
Q  211 gaacaaccatacaaatgaaagagacaccacactcttacccaaaacct 257  Q
    ||||||||| |||| | | ||||||||||||||||||||||||||||    
T  6421761 gaacaaccacacaagttagagagacaccacactcttacccaaaacct 6421715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 7262811 - 7262845
Alignment:
Q  103 cttagctcagatgatatggacaatgcataatatat 137  Q
    |||||||||| ||||||||||||||||||||||||    
T  7262811 cttagctcagttgatatggacaatgcataatatat 7262845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 19967413 - 19967455
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatat 135  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||    
T  19967413 tcctcgtgagcttagctcagttgatatgaacaatgcataatat 19967455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 138
Target Start/End: Complemental strand, 25186297 - 25186263
Alignment:
Q  104 ttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||| |||||||||||||||||||||||||    
T  25186297 ttagctcagttgatatggacaatgcataatatatg 25186263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 138
Target Start/End: Original strand, 29734697 - 29734731
Alignment:
Q  104 ttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||| |||||||||||||||||||||||||    
T  29734697 ttagctcagttgatatggacaatgcataatatatg 29734731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 34191367 - 34191321
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatgtgaagtct 146  Q
    ||||||||||||| || || |||||||||||||||||||| ||||||    
T  34191367 gagcttagctcagttggtagggacaatgcataatatatgtaaagtct 34191321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 34977198 - 34977244
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||| ||||| || ||||||||||||||||||||||    
T  34977198 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatg 34977244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 41187524 - 41187450
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaactccggtcac 166  Q
    ||||||| |||||||||| || || |||||||||||||||| |||||  ||||| ||  ||||||| ||||||||    
T  41187524 gtcctcgtgagcttagcttagttggtatggacaatgcataaaatatgcaaagtccggggttcgaaccccggtcac 41187450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 7350549 - 7350586
Alignment:
Q  101 agcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||||| || ||||||||||||||||||||||    
T  7350549 agcttagctcagttggtatggacaatgcataatatatg 7350586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 9547467 - 9547430
Alignment:
Q  101 agcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  9547467 agcttaactcagttgatatggacaatgcataatatatg 9547430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 33954283 - 33954328
Alignment:
Q  209 cagaacaaccatacaaatgaaagagacaccacactcttacccaaaa 254  Q
    ||||||||||||| || ||| |||||| ||||||||||||||||||    
T  33954283 cagaacaaccatataagtgagagagacgccacactcttacccaaaa 33954328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 44694679 - 44694728
Alignment:
Q  89 tgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||| || |||| ||||| |||||| ||||||||||||||||||    
T  44694679 tgtgtcctcgtgaacttaactcagttgatatagacaatgcataatatatg 44694728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 3672837 - 3672793
Alignment:
Q  210 agaacaaccatacaaatgaaagagacaccacactcttacccaaaa 254  Q
    |||||||||| |||| | | |||||||||||||||||||||||||    
T  3672837 agaacaaccacacaattaagagagacaccacactcttacccaaaa 3672793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 4238752 - 4238800
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||| | ||||||||||||| |  |||||||||||||||||||||||    
T  4238752 tgtccttgtgagcttagctcagttagtatggacaatgcataatatatgt 4238800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 5028849 - 5028897
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||| | ||||||||||||| ||||  ||||||||||||||||||||    
T  5028849 tgtcctggtgagcttagctcagttgattaggacaatgcataatatatgt 5028897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 5397946 - 5397910
Alignment:
Q  103 cttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||||| || |||||||||||||||||||||||    
T  5397946 cttagctcagctgctatggacaatgcataatatatgt 5397910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 255
Target Start/End: Complemental strand, 7598736 - 7598692
Alignment:
Q  211 gaacaaccatacaaatgaaagagacaccacactcttacccaaaac 255  Q
    ||||||||| |||| ||| |||||||||||||||||||| |||||    
T  7598736 gaacaaccacacaagtgagagagacaccacactcttaccaaaaac 7598692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 8761632 - 8761584
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||||||| ||||| || |||||||||| ||||||||||||    
T  8761632 tgtcctcgtgagcttaactcagttggtatggacaatacataatatatgt 8761584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 17736786 - 17736834
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||||||||||||| || |||| ||||||||||| ||||||    
T  17736786 tgtcctcgtgagcttagctcagttggtatgaacaatgcataaaatatgt 17736834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 34464474 - 34464430
Alignment:
Q  94 cctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||| ||| ||||||||| || ||||||||||||||||||||||    
T  34464474 cctcgtgagtttagctcagttggtatggacaatgcataatatatg 34464430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 41668658 - 41668714
Alignment:
Q  101 agcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaac 157  Q
    |||||||||||| || |||| |||||||||||||||||  ||||||||  |||||||    
T  41668658 agcttagctcagttggtatgaacaatgcataatatatgcaaagtctggcgttcgaac 41668714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 42791287 - 42791335
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||| ||||||||||||  |||  ||||||||||||||||||||    
T  42791287 gtgtcctcgtgagcttagctcacttgacttggacaatgcataatatatg 42791335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 35142218 - 35142170
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  35142218 gtgtcctcgtgagcttagctcagttgatatggacaatgcataatatatg 35142170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 34218057 - 34218108
Alignment:
Q  211 gaacaaccatacaaatgaaagagacaccacactcttacccaaaacctgaaga 262  Q
    ||||||||||||||  || |||||||||||||||||||||||||||| ||||    
T  34218057 gaacaaccatacaagcgagagagacaccacactcttacccaaaaccttaaga 34218108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 10244721 - 10244767
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||    
T  10244721 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 10244767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 30244405 - 30244359
Alignment:
Q  211 gaacaaccatacaaatgaaagagacaccacactcttacccaaaacct 257  Q
    ||||||||| |||| ||| ||||||||||||||||||||||||||||    
T  30244405 gaacaaccacacaagtgagagagacaccacactcttacccaaaacct 30244359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 39801700 - 39801746
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||    
T  39801700 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 39801746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 48980480 - 48980526
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    |||||||| ||||||||||||| || |||||||||||||||||||||    
T  48980480 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatat 48980526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 5526719 - 5526764
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||    
T  5526719 gtcctcgtgagcttagctcagttggtatggacaatgcataatatat 5526764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 21619066 - 21619119
Alignment:
Q  209 cagaacaaccatacaaatgaaagagacaccacactcttacccaaaacctgaaga 262  Q
    |||| ||||||||||| ||||||| |||||||||| ||||||||||||| ||||    
T  21619066 cagagcaaccatacaagtgaaagatacaccacacttttacccaaaaccttaaga 21619119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 21597673 - 21597721
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||| ||| ||||||| ||||| ||||||||||||||||||||||||||    
T  21597673 tgtcatcgtgagcttatctcagttgatatggacaatgcataatatatgt 21597721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 6054696 - 6054649
Alignment:
Q  210 agaacaaccatacaaatgaaagagacaccacactcttacccaaaacct 257  Q
    ||||||||||||||| |   ||||||||||||||||||||||||||||    
T  6054696 agaacaaccatacaagtaggagagacaccacactcttacccaaaacct 6054649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 7517716 - 7517669
Alignment:
Q  210 agaacaaccatacaaatgaaagagacaccacactcttacccaaaacct 257  Q
    |||||||||| |||| ||| | ||||||||||||||||||||||||||    
T  7517716 agaacaaccacacaagtgagacagacaccacactcttacccaaaacct 7517669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 8683063 - 8683110
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || ||| ||||||||||||||||||    
T  8683063 tgtcctcgtgagcttagctcagttggtatagacaatgcataatatatg 8683110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 11893127 - 11893174
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||||||||| ||||  ||||||||||||||||||| |||||    
T  11893127 tgtcctcgcgagcttaactcaagtgatatggacaatgcataaaatatg 11893174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 19416507 - 19416554
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||    
T  19416507 tgtcctcgtgagcttagctcagttggtatggacaatgcataaaatatg 19416554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 20243248 - 20243291
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataata 134  Q
    |||||||| ||||||||||||| || ||||||||||||||||||    
T  20243248 tgtcctcgtgagcttagctcagttggtatggacaatgcataata 20243291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 27462504 - 27462457
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| |||| |||||||| || ||||||||||||||||||||||    
T  27462504 tgtcctcgtgagcatagctcagttggtatggacaatgcataatatatg 27462457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 39926606 - 39926559
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||| ||| ||||||||||||| ||||| |||||||||||||||||||    
T  39926606 tgtcatcgtgagcttagctcagttgataaggacaatgcataatatatg 39926559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 40762271 - 40762228
Alignment:
Q  95 ctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||| |||||||||||||||| || |||||||||||||||||||    
T  40762271 ctcgtgagcttagctcagatggtaaggacaatgcataatatatg 40762228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 44473378 - 44473335
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataata 134  Q
    |||||| |||||||||||| || |||||||||||||||||||||    
T  44473378 tgtccttgcgagcttagcttagttgatatggacaatgcataata 44473335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 8227342 - 8227396
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtc 145  Q
    ||||| || ||| ||||||||| ||||| |||||||||||||||||||| |||||    
T  8227342 tgtccccgtgagtttagctcagttgataaggacaatgcataatatatgtaaagtc 8227396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 20205815 - 20205869
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtc 145  Q
    ||||||||  || ||||||||| || ||||||||||||||||||||||| |||||    
T  20205815 tgtcctcgtaagtttagctcagttggtatggacaatgcataatatatgtaaagtc 20205869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 31886009 - 31885943
Alignment:
Q  95 ctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaactccg 161  Q
    |||| ||| |||| |||| || |||| |||||||||||||||||| |  ||||||||||||||||||    
T  31886009 ctcgtgagtttagttcagttggtatgaacaatgcataatatatgtaagatctggaattcgaactccg 31885943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 49063825 - 49063783
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataata 134  Q
    ||||||| |||||||||||||||| || |||||||||||||||    
T  49063825 gtcctcgtgagcttagctcagatggtacggacaatgcataata 49063783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 3953436 - 3953481
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| |||||||||||||  | ||||||||||||||||||||||    
T  3953436 tcctcgtgagcttagctcagtcggtatggacaatgcataatatatg 3953481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 26825464 - 26825419
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    ||||||| ||||||| ||||  ||||||||||||||||||||||||    
T  26825464 gtcctcgtgagcttacctcaattgatatggacaatgcataatatat 26825419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 35751429 - 35751368
Alignment:
Q  101 agcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaactccgg 162  Q
    |||||||||||  ||||||| | |||||||||||||||| |||||| | |||| ||||||||    
T  35751429 agcttagctcaattgatatgaataatgcataatatatgtaaagtctaggattcaaactccgg 35751368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 36448742 - 36448799
Alignment:
Q  103 cttagctcagatgatatggacaa-tgcataatatatgtgaagtctggaattcgaactc 159  Q
    |||||||||| || ||||||||| | |||||||||||| ||||| |||||||||||||    
T  36448742 cttagctcagttggtatggacaaatacataatatatgtaaagtccggaattcgaactc 36448799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 257
Target Start/End: Original strand, 37533404 - 37533433
Alignment:
Q  228 aaagagacaccacactcttacccaaaacct 257  Q
    ||||||||||||||||||||||||||||||    
T  37533404 aaagagacaccacactcttacccaaaacct 37533433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 37624534 - 37624583
Alignment:
Q  89 tgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||| ||||||  ||||| || ||||||||||||||||||||||    
T  37624534 tgtgtcctcgtgagctttcctcagttggtatggacaatgcataatatatg 37624583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 38728201 - 38728242
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataa 132  Q
    |||||||| ||||||||||||| || ||||||||||||||||    
T  38728201 tgtcctcgtgagcttagctcagttggtatggacaatgcataa 38728242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 38841989 - 38842026
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatat 137  Q
    ||||||||||||| || |||||||||||||||||||||    
T  38841989 gagcttagctcagttggtatggacaatgcataatatat 38842026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 41527555 - 41527600
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| |||||||||| || || ||||||||||||||||||||||    
T  41527555 tcctcgtgagcttagcttagttggtatggacaatgcataatatatg 41527600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 42043125 - 42043088
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatat 137  Q
    ||||||||||||| || |||||||||||||||||||||    
T  42043125 gagcttagctcagttggtatggacaatgcataatatat 42043088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 45200199 - 45200252
Alignment:
Q  104 ttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaac 157  Q
    ||||||||| ||||||||||||||||||||| |||  || |||||| |||||||    
T  45200199 ttagctcagttgatatggacaatgcataatacatgcaaaatctggagttcgaac 45200252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 8883546 - 8883590
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatat 135  Q
    |||||||| ||||||| ||||| || |||||||||||||||||||    
T  8883546 tgtcctcgtgagcttaactcagttggtatggacaatgcataatat 8883590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 9901759 - 9901727
Alignment:
Q  230 agagacaccacactcttacccaaaacctgaaga 262  Q
    |||||||||||||||||||||||||||| ||||    
T  9901759 agagacaccacactcttacccaaaaccttaaga 9901727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 14681626 - 14681594
Alignment:
Q  230 agagacaccacactcttacccaaaacctgaaga 262  Q
    |||||||||||||||||||||||||||| ||||    
T  14681626 agagacaccacactcttacccaaaaccttaaga 14681594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 30781446 - 30781486
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataa 132  Q
    ||||||| ||||||||||||| |||||| ||||||||||||    
T  30781446 gtcctcgtgagcttagctcagttgatatagacaatgcataa 30781486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 31038590 - 31038550
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcata 131  Q
    |||||||| ||||||||||||| || |||||||||||||||    
T  31038590 tgtcctcgtgagcttagctcagttggtatggacaatgcata 31038550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 32228432 - 32228480
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||||||| ||||| || ||||||||| |||||||||||||    
T  32228432 tgtcctcgtgagcttaactcagctggtatggacaaagcataatatatgt 32228480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 34448678 - 34448630
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||||||| ||||| || | |||||||||||||||||||||    
T  34448678 tgtcctcgtgagcttaactcagttggtttggacaatgcataatatatgt 34448630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 42829303 - 42829255
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||| ||||||  ||||| ||||| |||||||||||||||||||    
T  42829303 gtgtcctcgtgagcttgactcagttgatagggacaatgcataatatatg 42829255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 43346620 - 43346584
Alignment:
Q  103 cttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||||| || |||||||||||||||||||||||    
T  43346620 cttagctcagttggtatggacaatgcataatatatgt 43346584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 43498481 - 43498529
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||||||||||||  |  |||||||||||||||||||||||    
T  43498481 tgtcctcgtgagcttagctcaactagtatggacaatgcataatatatgt 43498529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 43539172 - 43539124
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||| | ||||||||||||| ||||| | ||||||||||||||||||    
T  43539172 tgtccttgtgagcttagctcagttgataggaacaatgcataatatatgt 43539124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 44558839 - 44558795
Alignment:
Q  94 cctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||| ||| ||||||||| || ||||||||||||||||||||||    
T  44558839 cctcgtgagtttagctcagttggtatggacaatgcataatatatg 44558795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 48069901 - 48069857
Alignment:
Q  95 ctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||| ||||||||||||| ||| ||| ||||||||||||||||||    
T  48069901 ctcgtgagcttagctcagttgacatgaacaatgcataatatatgt 48069857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 10480708 - 10480772
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaa 156  Q
    ||||||| ||||||| |||||||| || |||||||||||||||||||| | ||||||||||||||    
T  10480708 gtcctcgtgagcttaactcagatggtaaggacaatgcataatatatgtaaggtctggaattcgaa 10480772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 42045440 - 42045393
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||    
T  42045440 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 42045393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 24324467 - 24324421
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  24324467 gtcctcgtgagcttagctcaggtgataaggacaatgcataatatatg 24324421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 26755610 - 26755656
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| ||||||||||||||||| |||||||    
T  26755610 gtcctcgtgagcttagctcagttgatatggacaatgcattatatatg 26755656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 27449512 - 27449466
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| | |||||||||||||||||||||||    
T  27449512 gtcctcgtgagcttagctcagttaatatggacaatgcataatatatg 27449466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 44641521 - 44641567
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  44641521 gtcctcgtgagtttagctcagttgatatggacaatgcataatatatg 44641567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 3693865 - 3693816
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||||||| ||||||||||||| |||||| ||||| |||||||||||||    
T  3693865 gtgtcctcgtgagcttagctcagttgatatagacaaagcataatatatgt 3693816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 1794589 - 1794636
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| |  ||||||||||||||||||||||    
T  1794589 tgtcctcgtgagcttagctcagttagtatggacaatgcataatatatg 1794636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 14319003 - 14318956
Alignment:
Q  210 agaacaaccatacaaatgaaagagacaccacactcttacccaaaacct 257  Q
    |||||||||  |||||| | ||||||||||||||||||||||||||||    
T  14319003 agaacaaccgcacaaataagagagacaccacactcttacccaaaacct 14318956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 15602244 - 15602197
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||||| |||| |||||||| || |||||||||||||||||||||||    
T  15602244 gtcctcgtgagcatagctcagttggtatggacaatgcataatatatgt 15602197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 24752716 - 24752673
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataata 134  Q
    |||||||| ||||||||||||| || ||||||||||||||||||    
T  24752716 tgtcctcgtgagcttagctcagttggtatggacaatgcataata 24752673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 45140074 - 45140027
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||| || ||||||||||||| || ||||||||||||||||||||||    
T  45140074 tgtccccgtgagcttagctcagttggtatggacaatgcataatatatg 45140027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 52441579 - 52441532
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || ||| ||||||||||||||||||    
T  52441579 tgtcctcgtgagcttagctcagttggtatagacaatgcataatatatg 52441532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 2613717 - 2613763
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||| ||||||||||||| || |||||||||||||||| ||||||    
T  2613717 tcctcgtgagcttagctcagttggtatggacaatgcataaaatatgt 2613763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 8253741 - 8253779
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  8253741 gagcttagctcagttggtatggacaatgcataatatatg 8253779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 16826348 - 16826394
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || |||||||||||||||| |||||    
T  16826348 gtcctcgtgagcttagctcagttgctatggacaatgcataaaatatg 16826394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 16967253 - 16967215
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||| || |||||||||||||||||||||||||    
T  16967253 gagcttagcttagttgatatggacaatgcataatatatg 16967215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 21400090 - 21400044
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||    
T  21400090 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatg 21400044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 25532967 - 25533013
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| |||||||| |||| || ||||||||||||||||||||||    
T  25532967 gtcctcgtgagcttagttcagttggtatggacaatgcataatatatg 25533013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 26661545 - 26661591
Alignment:
Q  211 gaacaaccatacaaatgaaagagacaccacactcttacccaaaacct 257  Q
    ||||||||| ||||  || ||||||||||||||||||||||||||||    
T  26661545 gaacaaccacacaagcgagagagacaccacactcttacccaaaacct 26661591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 26803518 - 26803472
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| || |||||||||| || ||||||||||||||||||||||    
T  26803518 gtcctcgtgaacttagctcagttggtatggacaatgcataatatatg 26803472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 48682000 - 48681954
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || |||| |||||||||||||||||    
T  48682000 gtcctcgtgagcttagctcagttggtatgaacaatgcataatatatg 48681954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 2884515 - 2884470
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    ||||||| || |||| ||||| ||||||||||||||||||||||||    
T  2884515 gtcctcgtgaccttaactcagttgatatggacaatgcataatatat 2884470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 10841902 - 10841939
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatat 137  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  10841902 gagcttaactcagttgatatggacaatgcataatatat 10841939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 13096890 - 13096935
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    ||||||| |||||||||||| ||| |||||||||||||||| ||||    
T  13096890 gtcctcgtgagcttagctcaaatggtatggacaatgcataaaatat 13096935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 17139584 - 17139539
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    ||||||| ||||||||||||| || || ||||||||||||||||||    
T  17139584 gtcctcgtgagcttagctcagttggtagggacaatgcataatatat 17139539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 38341213 - 38341262
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||||||| ||||||||||| | ||||||||||||  ||||||||||||    
T  38341213 gtgtcctcgtgagcttagctcggctgatatggacaacacataatatatgt 38341262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 50372436 - 50372383
Alignment:
Q  84 attggtgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    |||||| |||| | ||||||||||||||| ||||||  ||||||||||||||||    
T  50372436 attggtatgtcattgcgagcttagctcagttgatataaacaatgcataatatat 50372383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 13590103 - 13590151
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||||||||||||| || | |||||||||||||| ||||||    
T  13590103 tgtcctcgtgagcttagctcagttggtttggacaatgcataaaatatgt 13590151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 15729420 - 15729472
Alignment:
Q  88 gtgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtg 140  Q
    ||||||||||| ||||||| ||||| || ||  ||||||||||||||||||||    
T  15729420 gtgtgtcctcgtgagcttaactcagttggtagagacaatgcataatatatgtg 15729472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 16033519 - 16033471
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||| ||||||  ||||| ||||| |||||||||||||||||||    
T  16033519 gtgtcctcgtgagcttgactcagttgatagggacaatgcataatatatg 16033471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 24600336 - 24600388
Alignment:
Q  210 agaacaaccatacaaatgaaagagacaccacactcttacccaaaacctgaaga 262  Q
    ||||||||||||| |  || ||||||||||||||||||| |||||||| ||||    
T  24600336 agaacaaccatactagcgagagagacaccacactcttacacaaaaccttaaga 24600388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 26834513 - 26834561
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||||||||||||| ||||||| || |||||||| ||||||    
T  26834513 tgtcctcgtgagcttagctcagttgatatgaacgatgcataaaatatgt 26834561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 29701388 - 29701340
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||| ||| ||||||| || || ||||||||||||||||||||||||||    
T  29701388 tgtcttcgtgagcttaacttagttgatatggacaatgcataatatatgt 29701340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 30678881 - 30678833
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||||||| ||||| || || ||||||||||||||||||||    
T  30678881 tgtcctcgtgagcttaactcagttggtagggacaatgcataatatatgt 30678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 32594758 - 32594790
Alignment:
Q  230 agagacaccacactcttacccaaaacctgaaga 262  Q
    |||||||||||||||||||||||||||| ||||    
T  32594758 agagacaccacactcttacccaaaaccttaaga 32594790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 39252325 - 39252277
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||| ||| ||||||||||||| |||||| |||||| ||||||||||||    
T  39252325 tgtcatcgtgagcttagctcagttgatatcgacaatacataatatatgt 39252277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 40268203 - 40268251
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||||||||||||| || |||||||| | ||||||||||||    
T  40268203 tgtcctcgtgagcttagctcagttggtatggacagtacataatatatgt 40268251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 43840393 - 43840345
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||| ||| ||||| ||||||||||||||||||| ||||||    
T  43840393 tgtcctcgtgagtttaactcagttgatatggacaatgcataaaatatgt 43840345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 51127956 - 51127912
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    |||||| ||| ||||||||| | ||||||||||||||||||||||    
T  51127956 tcctcgtgagtttagctcagttaatatggacaatgcataatatat 51127912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 1253 - 1312
Alignment:
Q  103 cttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaactccgg 162  Q
    |||||||||| |||||||||||||||||||||||||| | ||||||| ||| ||||||||    
T  1253 cttagctcagttgatatggacaatgcataatatatgtaaggtctggagttcaaactccgg 1312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 6038331 - 6038272
Alignment:
Q  103 cttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaactccgg 162  Q
    |||||||||| |||||||||||||||||||||||||| | ||||||| ||| ||||||||    
T  6038331 cttagctcagttgatatggacaatgcataatatatgtaaggtctggagttcaaactccgg 6038272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 27718961 - 27718915
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||    
T  27718961 gtcctcgtgagcttagctcagttgatatggacaatgcataatatatg 27718915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 574377 - 574444
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaact 158  Q
    |||||| | ||||||||||||| |||||| ||||||||||||||||||| | ||| ||| ||||||||    
T  574377 tgtccttgtgagcttagctcagttgatatagacaatgcataatatatgtaaggtccggagttcgaact 574444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 13286124 - 13286171
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || ||| ||||||||||||||||||    
T  13286124 tgtcctcgtgagcttagctcagttggtatagacaatgcataatatatg 13286171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 23852904 - 23852951
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| |||||||||||||  | ||||||||||||||||||||||    
T  23852904 tgtcctcgtgagcttagctcagtcggtatggacaatgcataatatatg 23852951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 33451417 - 33451370
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || |||||| |||||||||||||||    
T  33451417 tgtcctcgtgagcttagctcagttggtatggataatgcataatatatg 33451370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 39821877 - 39821924
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || || |||||||||||||||||||    
T  39821877 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatg 39821924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 42200730 - 42200683
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| ||||| |||||||| ||||||||||    
T  42200730 tgtcctcgtgagcttagctcagttgatagggacaatgtataatatatg 42200683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 44293569 - 44293616
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||||| ||||||||||||| || ||| |||||||||||||||||||    
T  44293569 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgt 44293616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 6314390 - 6314344
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| ||||| ||||||||||||| |||||    
T  6314390 gtcctcgtgagcttagctcagttgataaggacaatgcataaaatatg 6314344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 262
Target Start/End: Original strand, 9483227 - 9483261
Alignment:
Q  228 aaagagacaccacactcttacccaaaacctgaaga 262  Q
    |||||||||||||||||||||||||||||| ||||    
T  9483227 aaagagacaccacactcttacccaaaaccttaaga 9483261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 11708980 - 11709026
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||    
T  11708980 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatg 11709026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 13357508 - 13357462
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||| ||||| || ||||||||||||||||||||||    
T  13357508 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatg 13357462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 19163603 - 19163557
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || ||||||||||||||||| ||||    
T  19163603 gtcctcgtgagcttagctcagttggtatggacaatgcataatttatg 19163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 30427733 - 30427771
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  30427733 gagcttagctcagttggtatggacaatgcataatatatg 30427771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 40401586 - 40401656
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaactccg 161  Q
    |||||||| |||| |||||||  || |||||||||||||||| |||||| |||||||  |||| |||||||    
T  40401586 tgtcctcgtgagcgtagctcaattggtatggacaatgcataaaatatgtaaagtctgagattcaaactccg 40401656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 42367722 - 42367788
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaac 157  Q
    ||||| || ||||||||||||| ||||| | |||||||||||||||||  ||||| ||| |||||||    
T  42367722 tgtccccgtgagcttagctcagttgataagaacaatgcataatatatgaaaagtccggagttcgaac 42367788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 264
Target Start/End: Original strand, 45122099 - 45122133
Alignment:
Q  230 agagacaccacactcttacccaaaacctgaagaaa 264  Q
    |||||||||||||||||||||||||||| ||||||    
T  45122099 agagacaccacactcttacccaaaaccttaagaaa 45122133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 7433134 - 7433199
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaac 157  Q
    ||||||| |||  |||||||| || | ||||||||||||||||||||| | |||||| ||||||||    
T  7433134 gtcctcgtgagtatagctcagttggtttggacaatgcataatatatgtaaggtctgggattcgaac 7433199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 8717541 - 8717496
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| ||| ||||||||| || ||||||||||||||||||||||    
T  8717541 tcctcgtgagtttagctcagttggtatggacaatgcataatatatg 8717496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 15310315 - 15310356
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataa 132  Q
    |||||||| ||||||||||||| |||||| ||||||||||||    
T  15310315 tgtcctcgtgagcttagctcagttgatatagacaatgcataa 15310356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 15490684 - 15490725
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataa 132  Q
    |||||||| ||||||||||||| |||||| ||||||||||||    
T  15490684 tgtcctcgtgagcttagctcagttgatatagacaatgcataa 15490725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 17704008 - 17704053
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| ||||||||||||| || || |||||||||||||||||||    
T  17704008 tcctcgtgagcttagctcagttggtaaggacaatgcataatatatg 17704053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 32223946 - 32223889
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctgga 149  Q
    ||||||| |||||||| |||| |||||  ||||||||||||||||||  |||||||||    
T  32223946 gtcctcgtgagcttagttcagttgatagagacaatgcataatatatgcaaagtctgga 32223889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 34997451 - 34997492
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataa 132  Q
    |||||||| ||||||||||||| |||||| ||||||||||||    
T  34997451 tgtcctcgtgagcttagctcagttgatatagacaatgcataa 34997492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 40167320 - 40167361
Alignment:
Q  96 tcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    ||||||||||| ||||| || |||||||||||||||||||||    
T  40167320 tcgcgagcttaactcagttggtatggacaatgcataatatat 40167361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 13272578 - 13272542
Alignment:
Q  103 cttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  13272578 cttaactcagttgatatggacaatgcataatatatgt 13272542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 18371694 - 18371730
Alignment:
Q  221 acaaatgaaagagacaccacactcttacccaaaacct 257  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  18371694 acaaatgagagacacaccacactcttacccaaaacct 18371730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 19778057 - 19778105
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| || ||||||||||||| || || |||||||||||||||||||    
T  19778057 gtgtccccgtgagcttagctcagttggtaaggacaatgcataatatatg 19778105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 20995437 - 20995485
Alignment:
Q  209 cagaacaaccatacaaatgaaagagacaccacactcttacccaaaacct 257  Q
    |||| |||||| |||| ||| |||||||||||| |||||||||||||||    
T  20995437 cagagcaaccacacaagtgagagagacaccacattcttacccaaaacct 20995485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 38763584 - 38763536
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||| |||| |||||||| || | ||||||||||||||||||||    
T  38763584 gtgtcctcgtgagcatagctcagttggtttggacaatgcataatatatg 38763536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 40316850 - 40316902
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagt 144  Q
    ||||||| ||||||| ||||| ||||||| | |||||||||||||||| ||||    
T  40316850 gtcctcgtgagcttatctcagttgatatgaataatgcataatatatgtaaagt 40316902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 139
Target Start/End: Original strand, 22394037 - 22394076
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  22394037 gagcttagctcagttgatatggacaatgcataatatatgt 22394076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 37932323 - 37932370
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||    
T  37932323 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 37932370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 39610405 - 39610362
Alignment:
Q  95 ctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  39610405 ctcgtgagcttagctcagttgatatggacaatgcataatatatg 39610362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 10199012 - 10199058
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    |||||||| ||||||||||||| || |||||||||||||||||||||    
T  10199012 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatat 10199058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 40716016 - 40715970
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||||    
T  40716016 gtcctcgtgagcttagctcaattgatatggacaatgcataatatatg 40715970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 6488998 - 6489047
Alignment:
Q  89 tgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||| ||||||||||||| || || |||||||||||||||||||    
T  6488998 tgtgtcctcgtgagcttagctcagttggtagggacaatgcataatatatg 6489047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 28207123 - 28207172
Alignment:
Q  89 tgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||| ||||||||||||| || |||||||||||||||| |||||    
T  28207123 tgtgtcctcgtgagcttagctcagttggtatggacaatgcataaaatatg 28207172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 624332 - 624285
Alignment:
Q  210 agaacaaccatacaaatgaaagagacaccacactcttacccaaaacct 257  Q
    |||||||||  |||| ||| ||||||||||||||||||||||||||||    
T  624332 agaacaaccccacaagtgagagagacaccacactcttacccaaaacct 624285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 6624769 - 6624816
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| ||  |||||||||||||||||||||    
T  6624769 tgtcctcgtgagcttagctcagttggcatggacaatgcataatatatg 6624816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 9893739 - 9893692
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||||||||||||||| |||||| || ||||||||| |||||    
T  9893739 tgtcctcgcgagcttagctcagttgatatagataatgcataaaatatg 9893692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 19248472 - 19248519
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || ||| ||||||||||||||||||    
T  19248472 tgtcctcgtgagcttagctcagttggtatagacaatgcataatatatg 19248519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 22522869 - 22522822
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||| | || ||||||||||||||||||||||    
T  22522869 tgtcctcgtgagcttagctcggttggtatggacaatgcataatatatg 22522822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 139
Target Start/End: Original strand, 26409255 - 26409294
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  26409255 gagcttagctcagttggtatggacaatgcataatatatgt 26409294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 29695009 - 29695056
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||||| || |||| ||||| ||||||||||||||||||||||||||    
T  29695009 gtcctcgtgaccttaactcagttgatatggacaatgcataatatatgt 29695056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 34436844 - 34436891
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || || |||||||||||||||||||    
T  34436844 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatg 34436891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 42505865 - 42505912
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||  |||||||||||| || ||||||||||||||||||||||    
T  42505865 tgtcctcgtaagcttagctcagttggtatggacaatgcataatatatg 42505912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 5485180 - 5485226
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||    
T  5485180 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatg 5485226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 8545053 - 8544987
Alignment:
Q  95 ctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaactccg 161  Q
    |||| ||||||| ||||| ||||| |||||||||||||||||||  | ||| ||| |||||||||||    
T  8545053 ctcgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtccggagttcgaactccg 8544987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 15889405 - 15889451
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||    
T  15889405 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatg 15889451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 16076433 - 16076471
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  16076433 gagcttaactcagctgatatggacaatgcataatatatg 16076471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 24485693 - 24485739
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| |||||||||| || || ||||||||||||||||||||||    
T  24485693 gtcctcgtgagcttagcttagttggtatggacaatgcataatatatg 24485739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 25604059 - 25604021
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  25604059 gagcttagctcagttgatatggacagtgcataatatatg 25604021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 32200514 - 32200468
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| ||| | |||||||||||||||||||    
T  32200514 gtcctcgtgagcttagctcagttgacagggacaatgcataatatatg 32200468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 36321561 - 36321515
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||    
T  36321561 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatg 36321515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 27721743 - 27721686
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctgg 148  Q
    |||||||| ||||||||||||| || || | |||||||||||||||||  ||||||||    
T  27721743 tgtcctcgtgagcttagctcagttggtaggaacaatgcataatatatgcaaagtctgg 27721686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 32559297 - 32559354
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctgg 148  Q
    |||||||| ||||||||||||  |||||| |||||||||||| |||||| | ||||||    
T  32559297 tgtcctcgtgagcttagctcaattgatattgacaatgcataaaatatgtaaggtctgg 32559354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 33645759 - 33645710
Alignment:
Q  89 tgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||| ||||||| ||||| || ||||||||||| ||||||||||    
T  33645759 tgtgtcctcgtgagcttaactcagttggtatggacaatgtataatatatg 33645710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 36522270 - 36522311
Alignment:
Q  221 acaaatgaaagagacaccacactcttacccaaaacctgaaga 262  Q
    |||| ||| |||||||||||||||||||||||||||| ||||    
T  36522270 acaagtgagagagacaccacactcttacccaaaaccttaaga 36522311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 40730262 - 40730217
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    ||||||| |||||||||| || ||||||| ||||||||||||||||    
T  40730262 gtcctcgtgagcttagctaagttgatatgaacaatgcataatatat 40730217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 689540 - 689588
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| || |||| ||||| |||||||||||||| |||||||||||    
T  689540 tgtcctcgtgaacttaactcagttgatatggacaatgtataatatatgt 689588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 16188829 - 16188865
Alignment:
Q  103 cttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||||| || |||||||||||||||||||||||    
T  16188829 cttagctcagttggtatggacaatgcataatatatgt 16188865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 16188931 - 16188967
Alignment:
Q  103 cttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||||| || |||||||||||||||||||||||    
T  16188931 cttagctcagttggtatggacaatgcataatatatgt 16188967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 17239449 - 17239401
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||| | |||||| |||||| || |||||||||||||||||||||||    
T  17239449 tgtccttgtgagctttgctcagttggtatggacaatgcataatatatgt 17239401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 20175720 - 20175764
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    |||||| ||||||||||||| || ||||||||||| |||||||||    
T  20175720 tcctcgtgagcttagctcagttggtatggacaatgtataatatat 20175764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 23118115 - 23118071
Alignment:
Q  95 ctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||| ||||||| ||||| ||||| ||||||||||||||||||||    
T  23118115 ctcgtgagcttaactcagttgataaggacaatgcataatatatgt 23118071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 32565517 - 32565565
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||||||||||||| || || ||| ||||||||||||||||    
T  32565517 tgtcctcgtgagcttagctcagctggtagggataatgcataatatatgt 32565565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 35150142 - 35150090
Alignment:
Q  210 agaacaaccatacaaatgaaagagacaccacactcttacccaaaacctgaaga 262  Q
    |||||||||| || | ||| |||||||||||||| ||||||||||||| ||||    
T  35150142 agaacaaccacactagtgagagagacaccacacttttacccaaaaccttaaga 35150090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 257
Target Start/End: Original strand, 42405637 - 42405665
Alignment:
Q  229 aagagacaccacactcttacccaaaacct 257  Q
    |||||||||||||||||||||||||||||    
T  42405637 aagagacaccacactcttacccaaaacct 42405665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 2186401 - 2186354
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||    
T  2186401 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 2186354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 19332369 - 19332322
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  19332369 tgtcctcgtgagcttatctcagatgataaggacaatgcataatatatg 19332322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 36203229 - 36203276
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  36203229 tgtcctcgtgagcttagctcagttgataaggacaatgcataatatatg 36203276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 52270098 - 52270051
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||    
T  52270098 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 52270051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 6459988 - 6459926
Alignment:
Q  95 ctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaac 157  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||| | ||| ||| |||||||    
T  6459988 ctcgtgagcttaactcagttgatatggacaatgcataatatatgtaaggtccggagttcgaac 6459926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 22040644 - 22040690
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  22040644 gtccttgcgagtttagctcagttgatatggacaatgcataatatatg 22040690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 26033265 - 26033315
Alignment:
Q  88 gtgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||||| |||| ||| |||| |||||||||||||||||||||||||    
T  26033265 gtgtgtcctcgtgagcctagttcagttgatatggacaatgcataatatatg 26033315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 39171437 - 39171391
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  39171437 gtcctcgtgagcttagctcagttgatatggacaatgcataaaatatg 39171391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 43374339 - 43374293
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  43374339 gtcctcgtgagcttagctcagttgatatggacaatgcataaaatatg 43374293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 9539260 - 9539203
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctgga 149  Q
    ||||||| ||||||||||||| || |||||||||||||||| ||||| ||||| ||||    
T  9539260 gtcctcgtgagcttagctcagttgttatggacaatgcataaaatatgcgaagtttgga 9539203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 11949833 - 11949784
Alignment:
Q  89 tgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||  ||||||||||||| || ||||||||||||||||||||||    
T  11949833 tgtgtcctcatgagcttagctcagttggtatggacaatgcataatatatg 11949784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 38453256 - 38453305
Alignment:
Q  89 tgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||| ||||||||||||| ||  |||||||||||||||||||||    
T  38453256 tgtgtcctcgtgagcttagctcagttggcatggacaatgcataatatatg 38453305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 36608681 - 36608733
Alignment:
Q  210 agaacaaccatacaaatgaaagagacaccacactcttacccaaaacctgaaga 262  Q
    |||||||||| || | ||| |||||||||||||||||||||||||||| ||||    
T  36608681 agaacaaccacactagtgagagagacaccacactcttacccaaaaccttaaga 36608733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 2932117 - 2932164
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||||| ||||||||||| | ||||| ||||||||||||||||||||    
T  2932117 gtcctcgtgagcttagctctgttgatagggacaatgcataatatatgt 2932164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 7230273 - 7230320
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || || |||||||||||||||||||    
T  7230273 tgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatg 7230320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 12698590 - 12698637
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||| ||| ||||||||||||| |||| ||||||||||||||||||||    
T  12698590 tgtcttcgtgagcttagctcagttgatttggacaatgcataatatatg 12698637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 16743352 - 16743305
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||| | ||||||||||||| ||||||||| |||||||||||||||    
T  16743352 tgtccttgtgagcttagctcagttgatatggataatgcataatatatg 16743305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 21318321 - 21318274
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||||||||| ||||| || || |||||||||||||||||||    
T  21318321 tgtcctcgcgagcttaactcagttggtagggacaatgcataatatatg 21318274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 24665059 - 24665012
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || |||||| |||||||||||||||    
T  24665059 tgtcctcgtgagcttagctcagttggtatggagaatgcataatatatg 24665012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 30051935 - 30051888
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| |||||||| |||| || ||||||||||||||||||||||    
T  30051935 tgtcctcgtgagcttagttcagttgttatggacaatgcataatatatg 30051888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 35021535 - 35021488
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| ||||||||||||| ||||| |||||    
T  35021535 tgtcctcgtgagcttagctcagttgatatggacaatacataaaatatg 35021488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 254
Target Start/End: Complemental strand, 43174276 - 43174233
Alignment:
Q  211 gaacaaccatacaaatgaaagagacaccacactcttacccaaaa 254  Q
    ||||||||| |||| ||| |||||||||||||||||||||||||    
T  43174276 gaacaaccacacaagtgagagagacaccacactcttacccaaaa 43174233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 50362207 - 50362160
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || || |||||||||||||||||||    
T  50362207 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatg 50362160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 56565051 - 56565004
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  56565051 tgtcctcgtgagcttagctcaattgatatggacaatgcataaaatatg 56565004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 9946421 - 9946467
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || |||||||||||||||| |||||    
T  9946421 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatg 9946467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 10204843 - 10204881
Alignment:
Q  101 agcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||||||| || |||||||||||||||||||||||    
T  10204843 agcttagctcagttggtatggacaatgcataatatatgt 10204881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 11198757 - 11198823
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaac 157  Q
    |||||||| ||||||||||||| || |||||| ||||||||| |||||| | ||||||  |||||||    
T  11198757 tgtcctcgtgagcttagctcagttggtatggagaatgcataaaatatgtaaggtctggggttcgaac 11198823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 12322667 - 12322713
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||    
T  12322667 gtcctcgtgagcttagctcagttggtacggacaatgcataatatatg 12322713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 19854567 - 19854605
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  19854567 gagcttagctcagttggtatggacaatgcataatatatg 19854605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 20383490 - 20383528
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  20383490 gagcttagctcagttggtatggacaatgcataatatatg 20383528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 20799461 - 20799415
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||    
T  20799461 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatg 20799415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 23809943 - 23809989
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||||||||| || ||||||||| ||||||||||||    
T  23809943 gtcctcgtgagcttagctcagttggtatggacaaagcataatatatg 23809989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 43034409 - 43034363
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||| ||||| || ||||||||||||||||||||||    
T  43034409 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatg 43034363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 46745184 - 46745230
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| ||||||| ||||| |||||||||||||| ||||||||||    
T  46745184 gtcctcgtgagcttatctcagttgatatggacaatgtataatatatg 46745230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 54587910 - 54587964
Alignment:
Q  108 ctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaactccgg 162  Q
    ||||| ||||||||| |||||||||||||||| | || ||| |||||||||||||    
T  54587910 ctcagttgatatggataatgcataatatatgtaaggtttgggattcgaactccgg 54587964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 16433024 - 16432979
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    ||||||| ||||||||||||| ||| || |||||||||||||||||    
T  16433024 gtcctcgtgagcttagctcagctgacatagacaatgcataatatat 16432979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 23304086 - 23304037
Alignment:
Q  89 tgtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||||| ||||||||||||| || || |||||| ||||||||||||    
T  23304086 tgtgtcctcgtgagcttagctcagttggtagggacaaggcataatatatg 23304037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 32180824 - 32180889
Alignment:
Q  92 gtcctcgcgagcttagctcagatgatatggacaatgcataatatatgtgaagtctggaattcgaac 157  Q
    ||||||| ||||||||||||| || ||| |||||||||||| |||||  ||||||||  |||||||    
T  32180824 gtcctcgtgagcttagctcagttggtatagacaatgcataaaatatgcaaagtctggggttcgaac 32180889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 39146643 - 39146680
Alignment:
Q  99 cgagcttagctcagatgatatggacaatgcataatata 136  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  39146643 cgagcttaactcagttgatatggacaatgcataatata 39146680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 9221951 - 9221999
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||| |||||||||||||||| || | || ||||||||||||||||||    
T  9221951 tgtccacgcgagcttagctcagttggtttgaacaatgcataatatatgt 9221999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 14136086 - 14136130
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatat 137  Q
    |||||| ||||||||||||| |||||  |||||||||||||||||    
T  14136086 tcctcgtgagcttagctcagttgataaagacaatgcataatatat 14136130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 14202547 - 14202499
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||||||| ||||| |||| |||| ||||||||||||||||    
T  14202547 tgtcctcgtgagcttaactcagttgatttggataatgcataatatatgt 14202499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 31879946 - 31879898
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||| ||||||| ||||| ||  |||||||||||||||||||||    
T  31879946 gtgtcctcgtgagcttaactcagttgtaatggacaatgcataatatatg 31879898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 36478984 - 36479032
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||  ||||||||||| | || |||||||||||||||||||||||    
T  36478984 tgtcctcatgagcttagctctgttggtatggacaatgcataatatatgt 36479032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 43722758 - 43722806
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||| ||| ||||| || |||||||||||||||||||||||    
T  43722758 tgtcctcgtgagtttaactcagttggtatggacaatgcataatatatgt 43722806  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 45496921 - 45496889
Alignment:
Q  230 agagacaccacactcttacccaaaacctgaaga 262  Q
    |||||||||||||||||||||||||||| ||||    
T  45496921 agagacaccacactcttacccaaaaccttaaga 45496889  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 49473637 - 49473685
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||||| ||||||||| ||| || || |||||||||||||||||||    
T  49473637 gtgtcctcgtgagcttagcccagttggtaaggacaatgcataatatatg 49473685  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 50002542 - 50002510
Alignment:
Q  230 agagacaccacactcttacccaaaacctgaaga 262  Q
    |||||||||||||||||||||||||||| ||||    
T  50002542 agagacaccacactcttacccaaaaccttaaga 50002510  T

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Target: scaffold0118 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 39995 - 40038
Alignment:
Q  95 ctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||| ||||||||||||| || ||||||||||||||||||||||    
T  39995 ctcgtgagcttagctcagttggtatggacaatgcataatatatg 40038  T

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Target: scaffold0040 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 56777 - 56824
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || ||||||||||| ||||||||||    
T  56777 tgtcctcgtgagcttagctcagttggtatggacaatgtataatatatg 56824  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 185256 - 185303
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||    
T  185256 tgtcctcgtgagcttagctcagttggtatggacaatgcataaaatatg 185303  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 31221 - 31176
Alignment:
Q  93 tcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    |||| ||||| ||||||||| || ||||||||||||||||||||||    
T  31221 tccttgcgagtttagctcagttggtatggacaatgcataatatatg 31176  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 17727 - 17764
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataatatat 137  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  17727 gagcttagctcagttgatttggacaatgcataatatat 17764  T

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Target: scaffold1327 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 549 - 597
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||||||| ||||||||||||| ||||| ||||| || |||||||||||    
T  549 tgtcctcgtgagcttagctcagttgataaggacagtgtataatatatgt 597  T

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Target: scaffold0135 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 32604 - 32652
Alignment:
Q  91 tgtcctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    ||||| |||||||||||||||| || | || ||||||||||||||||||    
T  32604 tgtccacgcgagcttagctcagttggtttgaacaatgcataatatatgt 32652  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 31991 - 31943
Alignment:
Q  90 gtgtcctcgcgagcttagctcagatgatatggacaatgcataatatatg 138  Q
    ||||||| | |||||| |||||| ||||| |||||||||||||||||||    
T  31991 gtgtcctagtgagcttggctcagttgatagggacaatgcataatatatg 31943  T

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Target: scaffold0017 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 35992 - 35948
Alignment:
Q  95 ctcgcgagcttagctcagatgatatggacaatgcataatatatgt 139  Q
    |||| ||||||||||||| ||||| |||||||||| |||||||||    
T  35992 ctcgtgagcttagctcagttgatagggacaatgcacaatatatgt 35948  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 244481 - 244513
Alignment:
Q  100 gagcttagctcagatgatatggacaatgcataa 132  Q
    ||||||||||||| |||||||||||||||||||    
T  244481 gagcttagctcagttgatatggacaatgcataa 244513  T

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