View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13190_low_6 (Length: 603)
Name: NF13190_low_6
Description: NF13190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13190_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 555; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 555; E-Value: 0
Query Start/End: Original strand, 25 - 591
Target Start/End: Original strand, 48695248 - 48695814
Alignment:
| Q |
25 |
tcttcttcatctactacttcggaacaaaacacttcttcatcatcatccgatggtgataatactataaataacaacagcagagctgatgatgaaggaaatg |
124 |
Q |
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| T |
48695248 |
tcttcttcatctactacttcggaacaaaacacttcttcatcatcatccgatggtgataatactataaataacaacagcagagctgatgatgaaggaaatg |
48695347 |
T |
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| Q |
125 |
gaatgttaaggattgatatacccaatgagtgtgaggccactacttcatcatcatcacccttatcttcggcggaagggagattaaagtcattaaagaggct |
224 |
Q |
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| T |
48695348 |
gaatgttaaggattgatatacccaatgagtgtgaggccactacttcatcatcatcacccttatcttcggcggaagggagattaaagtcattaaagaggct |
48695447 |
T |
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| Q |
225 |
tttaagcagtagcagcagaggcataatgagcctgaatccttggagtcccacttctactgtccaacaacaaacaaagccaaaggaagcagcaggacaaagc |
324 |
Q |
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| T |
48695448 |
tttaagcagtagcagcagaggcataatgagcctgaatccttggagtcccacttctactgtccaacaacaaacaaagccaaaggaagcagcaggacaaagc |
48695547 |
T |
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| Q |
325 |
tagctggctggctagggtggaactccaatttcccaatgttttattcattcattcattattatactttttaagtacatatatagatgtacatgtaggtatg |
424 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48695548 |
tagctggctggctagggtggaactccaatttcccaatgttttattcattcattcattattatactttttaagtacatatatagatgtacatgtaggtatg |
48695647 |
T |
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| Q |
425 |
ttaatgtaagcccgcccaaactgaggcagcagcaatcaatcaatcaaagttgtacattatacaaatactctgagaatagaaaattaaatttaaaacaaac |
524 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48695648 |
ttaatgtaagcccgcccaaactgaggcagcagcaatcaatcaatcaaagttgtatattatacaaatactctgagaatagaaaattaaatttaaaacaaac |
48695747 |
T |
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| Q |
525 |
caggaagtaactatgctgaccgttgtaaacaagaaccaaaataaaatggtactgtcttctgtctgtg |
591 |
Q |
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| T |
48695748 |
caggaagtaactgtgctgaccattgtaaacaagaaccaaaataaaatggtactgtcttctgtctgtg |
48695814 |
T |
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