View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13193_high_17 (Length: 207)
Name: NF13193_high_17
Description: NF13193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13193_high_17 |
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Alignment Details
Target: chr3 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 35446512 - 35446338
Alignment:
| Q |
14 |
gagcacagaaatacatgacctgcagaattgcatcagggtttttcatgacaatttgctttccttcatttccacttgtagtgcagaaaatgtaagttccaaa |
113 |
Q |
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| T |
35446512 |
gagcacagaaatacatgacctgcagaatagcatcagggtttttcatgacaatttgctttccttcatttccacttgtagtgcagaaaatgtaagttccaaa |
35446413 |
T |
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| Q |
114 |
gggtctataaggactcaaaggaacaaaatttgcaatagtttcaagtgttgcttctgttgttcccattagcctaca |
188 |
Q |
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| T |
35446412 |
gggtctataaggactcaaaggaacaaaatttgcaatagtttcaagtgttgcttctgttgttcccattagcctaca |
35446338 |
T |
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