View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13193_high_5 (Length: 334)
Name: NF13193_high_5
Description: NF13193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13193_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 10 - 318
Target Start/End: Complemental strand, 4024601 - 4024293
Alignment:
| Q |
10 |
agatgaacaagataaaggtgtaaataactaattatctaaataaagtgtaagtgattaattttactatattttgttgaggaagaaagggagttatgtcata |
109 |
Q |
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| T |
4024601 |
agatgaacaagataaatgtgtaaataactaattatctaaataaagtgtaagtgattaattttactatattttgttgaggaagaaagggagttatgtcata |
4024502 |
T |
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| Q |
110 |
aaactttttagagggagagggtcattacaccattattattgaaggaagaaaataatgaaaaattaaattgagtgaagaagtgcattgaatagtttgtact |
209 |
Q |
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| T |
4024501 |
aaactttttagagggagagggtcattacaccattattgttgaaggaagaaaataatgaaaaattaaattgagtgaagaagtgcattgaatagtttgtact |
4024402 |
T |
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| Q |
210 |
attgaaatttaaaaataaccaaaaccaaagaaagtgttagtagagcccacatgagttggttgtcattggcaatggatagcttgaaatgatgaccaaactt |
309 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4024401 |
attgaaatttaaaaataaccaaaacaaaagaaagtgttagtagagcccacatgagttggttgtcattggcaatggatagcttgaaatgatgaccaaactt |
4024302 |
T |
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| Q |
310 |
gtagcaatg |
318 |
Q |
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||||||||| |
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| T |
4024301 |
gtagcaatg |
4024293 |
T |
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