View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13196_low_4 (Length: 455)

Name: NF13196_low_4
Description: NF13196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13196_low_4
NF13196_low_4
[»] chr4 (58 HSPs)
chr4 (107-310)||(19901874-19902077)
chr4 (108-309)||(34778338-34778539)
chr4 (127-310)||(3952126-3952309)
chr4 (108-310)||(56558196-56558398)
chr4 (116-310)||(23610567-23610761)
chr4 (108-310)||(5763118-5763320)
chr4 (108-311)||(33247085-33247286)
chr4 (108-310)||(18206996-18207198)
chr4 (108-310)||(5416422-5416625)
chr4 (116-310)||(38079676-38079870)
chr4 (108-311)||(39862434-39862637)
chr4 (108-311)||(12153088-12153274)
chr4 (123-311)||(33262507-33262695)
chr4 (116-310)||(24073542-24073735)
chr4 (149-298)||(30567859-30568008)
chr4 (108-234)||(12241440-12241566)
chr4 (170-311)||(12312430-12312572)
chr4 (108-311)||(47922034-47922233)
chr4 (108-310)||(52018700-52018882)
chr4 (115-305)||(47922327-47922518)
chr4 (107-210)||(17080696-17080799)
chr4 (123-198)||(12312571-12312646)
chr4 (136-310)||(23474056-23474229)
chr4 (116-247)||(25442193-25442325)
chr4 (116-271)||(56269071-56269217)
chr4 (150-303)||(1871237-1871388)
chr4 (135-240)||(31862246-31862351)
chr4 (194-283)||(26428971-26429061)
chr4 (182-311)||(56453776-56453904)
chr4 (194-301)||(34927488-34927596)
chr4 (182-271)||(5524438-5524527)
chr4 (250-310)||(33524321-33524381)
chr4 (116-271)||(37002246-37002391)
chr4 (136-303)||(33841768-33841934)
chr4 (122-208)||(43447638-43447724)
chr4 (182-271)||(42010108-42010197)
chr4 (123-198)||(26428575-26428650)
chr4 (194-271)||(36688183-36688260)
chr4 (181-305)||(36532616-36532738)
chr4 (116-209)||(3326441-3326535)
chr4 (182-258)||(48084533-48084609)
chr4 (189-271)||(1015849-1015931)
chr4 (141-303)||(42844151-42844312)
chr4 (189-234)||(17080811-17080856)
chr4 (111-170)||(16567388-16567447)
chr4 (194-264)||(28701836-28701907)
chr4 (188-311)||(48914474-48914596)
chr4 (134-212)||(2275276-2275354)
chr4 (135-201)||(32366432-32366498)
chr4 (222-271)||(5361457-5361506)
chr4 (199-271)||(17493010-17493083)
chr4 (199-271)||(32146510-32146583)
chr4 (199-271)||(46238974-46239047)
chr4 (199-271)||(53526096-53526169)
chr4 (199-271)||(55160365-55160438)
chr4 (182-234)||(4404281-4404333)
chr4 (199-264)||(25219003-25219070)
chr4 (311-339)||(25432345-25432373)
[»] chr6 (31 HSPs)
chr6 (107-310)||(4804364-4804567)
chr6 (107-310)||(7162000-7162203)
chr6 (107-309)||(1249105-1249305)
chr6 (107-310)||(21159325-21159524)
chr6 (131-310)||(17944102-17944281)
chr6 (136-310)||(12412582-12412756)
chr6 (116-312)||(27826463-27826659)
chr6 (108-247)||(29698080-29698219)
chr6 (108-310)||(32737791-32737976)
chr6 (115-307)||(227522-227715)
chr6 (166-311)||(13089704-13089849)
chr6 (134-311)||(30460763-30460943)
chr6 (136-302)||(7215816-7215981)
chr6 (136-303)||(2800574-2800740)
chr6 (186-310)||(13888478-13888603)
chr6 (182-271)||(24484870-24484959)
chr6 (140-311)||(1518251-1518404)
chr6 (141-311)||(1516162-1516314)
chr6 (136-310)||(17828525-17828698)
chr6 (182-271)||(2142288-2142377)
chr6 (136-186)||(17398774-17398824)
chr6 (231-310)||(1515498-1515576)
chr6 (124-218)||(28696688-28696782)
chr6 (199-271)||(7545645-7545718)
chr6 (249-302)||(29229152-29229204)
chr6 (141-201)||(17275921-17275981)
chr6 (182-264)||(32254033-32254115)
chr6 (199-271)||(7098190-7098263)
chr6 (249-298)||(28696624-28696672)
chr6 (277-309)||(3177061-3177093)
chr6 (125-208)||(31708250-31708334)
[»] chr5 (40 HSPs)
chr5 (116-311)||(35660564-35660759)
chr5 (108-310)||(37266648-37266850)
chr5 (108-310)||(32129573-32129775)
chr5 (116-307)||(11775717-11775909)
chr5 (108-310)||(13032036-13032237)
chr5 (108-302)||(4895699-4895893)
chr5 (123-310)||(14349736-14349922)
chr5 (116-310)||(18625377-18625571)
chr5 (108-310)||(40753118-40753320)
chr5 (116-310)||(39902340-39902534)
chr5 (108-310)||(34827111-34827311)
chr5 (108-294)||(8440943-8441129)
chr5 (109-247)||(4592719-4592856)
chr5 (108-218)||(1475686-1475796)
chr5 (135-308)||(43309062-43309225)
chr5 (123-312)||(3057348-3057536)
chr5 (127-287)||(3057134-3057293)
chr5 (195-311)||(29340999-29341114)
chr5 (141-305)||(32793324-32793487)
chr5 (182-271)||(36290593-36290682)
chr5 (182-303)||(18653352-18653472)
chr5 (116-208)||(10173873-10173961)
chr5 (142-234)||(28142807-28142901)
chr5 (185-271)||(41660100-41660186)
chr5 (183-310)||(10361971-10362097)
chr5 (195-310)||(31653039-31653153)
chr5 (136-311)||(31546431-31546605)
chr5 (249-303)||(9460599-9460652)
chr5 (183-271)||(3041302-3041391)
chr5 (136-260)||(14688519-14688643)
chr5 (198-270)||(27428877-27428949)
chr5 (194-258)||(43222129-43222193)
chr5 (182-261)||(17247397-17247476)
chr5 (225-304)||(35650352-35650430)
chr5 (182-264)||(2984392-2984474)
chr5 (134-176)||(23253736-23253778)
chr5 (141-179)||(30355218-30355256)
chr5 (125-170)||(10242766-10242811)
chr5 (311-339)||(20330411-20330439)
chr5 (134-174)||(38283828-38283868)
[»] chr2 (41 HSPs)
chr2 (108-311)||(35316742-35316945)
chr2 (116-315)||(28564816-28565016)
chr2 (116-307)||(13238606-13238797)
chr2 (108-310)||(23259443-23259645)
chr2 (116-217)||(39465700-39465801)
chr2 (129-311)||(45625034-45625199)
chr2 (107-205)||(41983401-41983498)
chr2 (155-311)||(11864841-11864989)
chr2 (123-205)||(374499-374581)
chr2 (181-310)||(2063343-2063472)
chr2 (182-302)||(4446860-4446980)
chr2 (134-271)||(374946-375073)
chr2 (107-209)||(10877618-10877721)
chr2 (116-196)||(2061302-2061382)
chr2 (123-310)||(38397015-38397199)
chr2 (123-204)||(12949402-12949482)
chr2 (178-287)||(21454475-21454582)
chr2 (182-271)||(23459841-23459930)
chr2 (228-304)||(40640706-40640783)
chr2 (181-264)||(30709100-30709183)
chr2 (140-310)||(19908729-19908897)
chr2 (116-271)||(8988791-8988935)
chr2 (116-271)||(29188588-29188734)
chr2 (227-311)||(38824061-38824146)
chr2 (181-299)||(36929706-36929823)
chr2 (182-310)||(36758818-36758945)
chr2 (150-264)||(34512027-34512140)
chr2 (123-173)||(42075456-42075506)
chr2 (199-271)||(13780506-13780579)
chr2 (182-311)||(35315493-35315621)
chr2 (182-246)||(30840872-30840935)
chr2 (116-175)||(157359-157417)
chr2 (263-310)||(34887746-34887793)
chr2 (230-292)||(19905920-19905981)
chr2 (181-303)||(30857642-30857763)
chr2 (134-175)||(3354844-3354885)
chr2 (135-184)||(30824122-30824171)
chr2 (270-307)||(32009934-32009971)
chr2 (199-271)||(40254144-40254217)
chr2 (135-184)||(41073021-41073070)
chr2 (2-54)||(6204535-6204587)
[»] scaffold0012 (1 HSPs)
scaffold0012 (108-310)||(207980-208182)
[»] chr8 (33 HSPs)
chr8 (108-310)||(30426625-30426827)
chr8 (108-311)||(36991273-36991476)
chr8 (116-310)||(28069644-28069838)
chr8 (109-310)||(40695204-40695404)
chr8 (116-310)||(10652573-10652768)
chr8 (108-286)||(41511179-41511357)
chr8 (108-310)||(10672470-10672670)
chr8 (123-308)||(28318854-28319045)
chr8 (123-307)||(44859128-44859310)
chr8 (115-310)||(45113194-45113390)
chr8 (116-274)||(24101941-24102099)
chr8 (125-310)||(37966400-37966583)
chr8 (115-231)||(8412178-8412294)
chr8 (124-305)||(6014127-6014309)
chr8 (108-209)||(12177621-12177722)
chr8 (108-209)||(12422049-12422150)
chr8 (123-244)||(27490028-27490149)
chr8 (249-310)||(5033310-5033371)
chr8 (182-271)||(26749543-26749632)
chr8 (116-176)||(5033031-5033091)
chr8 (136-287)||(42761660-42761809)
chr8 (189-261)||(34612562-34612634)
chr8 (182-271)||(1937149-1937239)
chr8 (142-264)||(36748494-36748611)
chr8 (231-275)||(12177572-12177616)
chr8 (231-275)||(12422000-12422044)
chr8 (182-258)||(30796269-30796344)
chr8 (215-257)||(5033108-5033150)
chr8 (181-258)||(6399914-6399991)
chr8 (199-271)||(17867654-17867727)
chr8 (138-184)||(21492730-21492777)
chr8 (182-270)||(3763518-3763606)
chr8 (182-218)||(24241566-24241602)
[»] chr7 (39 HSPs)
chr7 (108-310)||(21151069-21151271)
chr7 (123-310)||(9559010-9559197)
chr7 (123-315)||(16366450-16366642)
chr7 (125-309)||(45260384-45260568)
chr7 (123-310)||(7362500-7362686)
chr7 (108-310)||(12139245-12139446)
chr7 (116-310)||(44647890-44648083)
chr7 (124-310)||(4888400-4888586)
chr7 (116-310)||(18198181-18198375)
chr7 (110-307)||(47226035-47226229)
chr7 (116-302)||(25084690-25084878)
chr7 (115-310)||(33450430-33450626)
chr7 (115-310)||(47500238-47500434)
chr7 (116-302)||(29630973-29631156)
chr7 (115-311)||(34985900-34986096)
chr7 (116-292)||(32915884-32916056)
chr7 (166-310)||(39855770-39855913)
chr7 (182-271)||(47799895-47799984)
chr7 (194-302)||(989132-989239)
chr7 (124-298)||(33608845-33609019)
chr7 (233-307)||(47271107-47271180)
chr7 (1-54)||(18947314-18947367)
chr7 (150-261)||(46802336-46802445)
chr7 (182-271)||(30588526-30588615)
chr7 (136-209)||(40019626-40019699)
chr7 (134-271)||(47080374-47080509)
chr7 (134-271)||(19889029-19889156)
chr7 (199-264)||(19027685-19027751)
chr7 (199-264)||(20726885-20726951)
chr7 (199-271)||(14696752-14696825)
chr7 (2-47)||(18948242-18948287)
chr7 (143-208)||(30153240-30153305)
chr7 (110-258)||(32916098-32916236)
chr7 (134-175)||(6882149-6882190)
chr7 (199-271)||(30102501-30102574)
chr7 (206-271)||(35737128-35737193)
chr7 (220-264)||(29844320-29844364)
chr7 (135-175)||(30588489-30588529)
chr7 (311-339)||(35943004-35943032)
[»] chr1 (45 HSPs)
chr1 (106-310)||(50484301-50484505)
chr1 (116-311)||(12151692-12151887)
chr1 (118-310)||(50294019-50294211)
chr1 (108-310)||(23861908-23862114)
chr1 (107-310)||(48327110-48327313)
chr1 (108-252)||(12380924-12381068)
chr1 (108-252)||(12384991-12385135)
chr1 (106-310)||(45977937-45978124)
chr1 (124-311)||(40328209-40328395)
chr1 (115-311)||(18976259-18976453)
chr1 (108-209)||(7841767-7841868)
chr1 (236-310)||(12380833-12380907)
chr1 (236-310)||(12384900-12384974)
chr1 (138-261)||(24977187-24977310)
chr1 (116-214)||(2845190-2845289)
chr1 (136-298)||(39426156-39426317)
chr1 (196-309)||(32361264-32361377)
chr1 (222-310)||(7840635-7840723)
chr1 (137-234)||(46608409-46608504)
chr1 (136-270)||(5047377-5047510)
chr1 (182-271)||(52280034-52280123)
chr1 (182-271)||(30077639-30077728)
chr1 (134-199)||(40988658-40988723)
chr1 (136-303)||(32887744-32887910)
chr1 (243-311)||(1228495-1228563)
chr1 (150-206)||(45970805-45970861)
chr1 (110-229)||(23916007-23916124)
chr1 (182-260)||(26860056-26860134)
chr1 (110-246)||(44483687-44483822)
chr1 (142-246)||(7844939-7845043)
chr1 (194-257)||(24413291-24413354)
chr1 (110-310)||(30210666-30210866)
chr1 (136-216)||(5803810-5803890)
chr1 (249-309)||(30860726-30860786)
chr1 (199-271)||(6948825-6948899)
chr1 (158-209)||(7783237-7783288)
chr1 (150-229)||(26372212-26372290)
chr1 (135-186)||(42720837-42720888)
chr1 (124-182)||(1609622-1609680)
chr1 (182-236)||(26768886-26768940)
chr1 (181-311)||(32618791-32618919)
chr1 (199-271)||(18107316-18107389)
chr1 (150-217)||(19910511-19910577)
chr1 (311-339)||(49214187-49214215)
chr1 (136-207)||(49384719-49384788)
[»] chr3 (37 HSPs)
chr3 (131-310)||(27033591-27033770)
chr3 (108-310)||(43719903-43720105)
chr3 (108-310)||(2229900-2230102)
chr3 (126-310)||(19830387-19830572)
chr3 (110-310)||(34373750-34373950)
chr3 (108-308)||(40851690-40851891)
chr3 (311-444)||(20749285-20749418)
chr3 (123-292)||(34373559-34373728)
chr3 (123-307)||(46167325-46167509)
chr3 (115-311)||(48084743-48084940)
chr3 (116-293)||(550790-550966)
chr3 (123-286)||(12402897-12403061)
chr3 (211-311)||(24754677-24754777)
chr3 (211-311)||(24763674-24763774)
chr3 (141-294)||(566746-566898)
chr3 (116-271)||(31523663-31523808)
chr3 (116-271)||(42613015-42613160)
chr3 (136-311)||(29586282-29586455)
chr3 (124-205)||(52859441-52859523)
chr3 (182-271)||(49679265-49679354)
chr3 (258-310)||(24647905-24647957)
chr3 (115-264)||(40810357-40810506)
chr3 (196-304)||(28229365-28229472)
chr3 (135-186)||(32577476-32577526)
chr3 (182-260)||(1995435-1995513)
chr3 (224-310)||(33632855-33632940)
chr3 (136-303)||(10474402-10474568)
chr3 (135-294)||(25285810-25285966)
chr3 (136-206)||(36354323-36354393)
chr3 (2-54)||(46461891-46461943)
chr3 (116-175)||(3009174-3009233)
chr3 (228-303)||(30235418-30235492)
chr3 (124-175)||(49289042-49289093)
chr3 (141-206)||(2310261-2310324)
chr3 (110-175)||(41727030-41727095)
chr3 (116-176)||(20485808-20485868)
chr3 (273-305)||(51716671-51716703)
[»] scaffold0035 (1 HSPs)
scaffold0035 (108-310)||(16353-16555)
[»] scaffold0250 (1 HSPs)
scaffold0250 (108-311)||(7064-7271)
[»] scaffold0008 (1 HSPs)
scaffold0008 (116-310)||(9157-9348)
[»] scaffold0009 (1 HSPs)
scaffold0009 (142-305)||(6396-6559)
[»] scaffold0006 (1 HSPs)
scaffold0006 (123-306)||(73817-73983)
[»] scaffold0456 (1 HSPs)
scaffold0456 (136-310)||(13641-13799)
[»] scaffold0126 (1 HSPs)
scaffold0126 (123-310)||(22399-22585)
[»] scaffold0171 (1 HSPs)
scaffold0171 (182-261)||(17311-17390)
[»] scaffold0468 (1 HSPs)
scaffold0468 (140-206)||(5559-5625)
[»] scaffold0664 (1 HSPs)
scaffold0664 (199-271)||(4695-4768)
[»] scaffold0252 (1 HSPs)
scaffold0252 (136-212)||(10528-10604)


Alignment Details
Target: chr4 (Bit Score: 172; Significance: 3e-92; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 107 - 310
Target Start/End: Complemental strand, 19902077 - 19901874
Alignment:
Q  107 ggggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 206  Q
    |||||||  |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19902077 ggggttaagatcctctccatttatgtgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatg 19901978  T
Q  207 gtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttc 306  Q
    ||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19901977 gtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttc 19901878  T
Q  307 accc 310  Q
    ||||    
T  19901877 accc 19901874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 108 - 309
Target Start/End: Original strand, 34778338 - 34778539
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34778338 gggttagaatcctctccatttatgtgtttctccatttcttcaatgtggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 34778437  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||||| |||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  34778438 tgggacccacttagtggtaggatccaccatctattttttgtgtctatctctcttcaacttgcaaaactccatttattttgccaaatggagaggatcttca 34778537  T
Q  308 cc 309  Q
    ||    
T  34778538 cc 34778539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 127 - 310
Target Start/End: Complemental strand, 3952309 - 3952126
Alignment:
Q  127 ttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggta 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3952309 ttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccacttagtggta 3952210  T
Q  227 ggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  3952209 ggacccaccatctattttttttgtctatctctctccaacttgccaaactccatttattttgccaaatggagaggatcttcaccc 3952126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 108 - 310
Target Start/End: Original strand, 56558196 - 56558398
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  56558196 gggttaggatcctctccatttatatgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 56558295  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  56558296 tgggacccacttagtgataggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 56558395  T
Q  308 ccc 310  Q
    |||    
T  56558396 ccc 56558398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 116 - 310
Target Start/End: Original strand, 23610567 - 23610761
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  23610567 atcctctccatttatatgtttctccatttcttcaatttggagagataaagatacataaaatcttgaaaaaagtaaaatatatttaatgatggtgggaccc 23610666  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23610667 acttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagaggatcttcaccc 23610761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 108 - 310
Target Start/End: Complemental strand, 5763320 - 5763118
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5763320 gggttaggatcatctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 5763221  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| |||||| |||||| |||||||||||||    
T  5763220 tgggacccacttagtggtaggacccaccatctattttttgtttctatctctctccaacttgtaaaactccatatattttgccaaattgagaggatcttca 5763121  T
Q  308 ccc 310  Q
    |||    
T  5763120 ccc 5763118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 108 - 311
Target Start/End: Complemental strand, 33247286 - 33247085
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  33247286 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatc--gaaaaaaataaaatataattaatgatgg 33247189  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    ||  ||||| | |||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33247188 tggaacccatttagtggtagaacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 33247089  T
Q  308 cccg 311  Q
    ||||    
T  33247088 cccg 33247085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 108 - 310
Target Start/End: Complemental strand, 18207198 - 18206996
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||     
T  18207198 gggttaggatcctctccatttatgtgtttctcaatttcttcaatttggaaagataaagacacataaaatcttgaaaaaggtaaaatataattaatgatga 18207099  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||  |||||||||||||||||||    
T  18207098 tgggacccacttagtggtaggacccaccatctattttttttgtctatctctctctaacttgcaaaactacatttattttgtcaaatggagaggatcttca 18206999  T
Q  308 ccc 310  Q
    |||    
T  18206998 ccc 18206996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 108 - 310
Target Start/End: Complemental strand, 5416625 - 5416422
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatctt--gaaaaaagtaaaatataattaatgat 205  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||||    
T  5416625 gggttagaatcctctcaatttatgtgtttctccatttcttcaatttggacagataaagacacataaaatctttaaaaaaaagtaaaatataattaatgat 5416526  T
Q  206 ggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatctt 305  Q
    |||| |||||||| ||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  5416525 ggtgggacccacttagtggtaggacccacaatcta-tttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatctt 5416427  T
Q  306 caccc 310  Q
    |||||    
T  5416426 caccc 5416422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 116 - 310
Target Start/End: Complemental strand, 38079870 - 38079676
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||    
T  38079870 atcctctccatttatgcgtttctccattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaatcc 38079771  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||| ||| |||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||   |||||||||||||||||||||    
T  38079770 acttagtagtaggacccaccatctatttcttgtgtctatctctctcaaactagcaaaactccatttattttgttaaatggagaggatcttcaccc 38079676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 108 - 311
Target Start/End: Original strand, 39862434 - 39862637
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| ||||||  ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39862434 gggttaggatcctcttcatttatgtgtttctcattttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgg 39862533  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    ||  || || | |||| |||||| |||||||||||||||| ||||||||||||| ||||||||||| || |||||||||| |||||||||||||||||||    
T  39862534 tggaactcatttagtgataggacacaccatctattttttgtgtctatctctctcaaacttgcaaaattctatttattttatcaaatggagaggatcttca 39862633  T
Q  308 cccg 311  Q
    ||||    
T  39862634 cccg 39862637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 108 - 311
Target Start/End: Original strand, 12153088 - 12153274
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12153088 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 12153187  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    ||                 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12153188 tg-----------------ggacccaccatctaatttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 12153270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 123 - 311
Target Start/End: Complemental strand, 33262695 - 33262507
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagt 222  Q
    |||||||||| ||| || |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| | | |||    
T  33262695 ccatttatgtatttttctatttcttcaatttggagagataaagacacataaaattttaaaaaaagtaaaatataattaatgatggtgggacctatttagt 33262596  T
Q  223 ggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||||||||||| | ||||||||| |||||| |||||||||||||||||    
T  33262595 ggtaggatccaccatctattttttgtgtctatctctctctaacttgcaaaacacaatttattttgccaaatagagaggatcttcacccg 33262507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 116 - 310
Target Start/End: Original strand, 24073542 - 24073735
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||  || |||||||||||||||| | |||||    
T  24073542 atcctctccatttatgtgtttctcaatttcttccatttggagagatgaaggcacataaaatcttgaaaaaaa-aatatataattaatgatggcgggaccc 24073640  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||| |||||||||||||||||||||||| ||| ||||||||||||||||||| |||| ||||||||||||| |||||||| ||||||||||||||    
T  24073641 acttagtggtaggacccaccatctatttgttgtgtctatctctctccaacttacaaatctccatttattttgccaaatggggaggatcttcaccc 24073735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 149 - 298
Target Start/End: Original strand, 30567859 - 30568008
Alignment:
Q  149 aatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgg 248  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||||||||||     
T  30567859 aattttgatagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgatggaacccacttagtggtaggacccaccatctattttttgt 30567958  T
Q  249 gtctatctctctccaacttgcaaaactccatttattttaccaaatggaga 298  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  30567959 gtctatctctcttcaacttgcaaaactccatttattttgccaaatggaga 30568008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 12241566 - 12241440
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12241566 gggttaggatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 12241467  T
Q  208 tgagacccactcagtggtaggacccac 234  Q
    || |||||||| |||||||||||||||    
T  12241466 tgggacccacttagtggtaggacccac 12241440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 170 - 311
Target Start/End: Complemental strand, 12312572 - 12312430
Alignment:
Q  170 ataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgg-gtctatctctctccaacttg 268  Q
    |||||||||| || ||||||||||||||||||||||| || |||||||| |||||||||| ||||||||||||||||   ||||||||||||||||||||    
T  12312572 ataaaatcttaaagaaagtaaaatataattaatgatgatgggacccacttagtggtaggatccaccatctatttttttttgtctatctctctccaacttg 12312473  T
Q  269 caaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  12312472 caaaactccatttattttgccaaatggagaggatcttcacccg 12312430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 108 - 311
Target Start/End: Complemental strand, 47922233 - 47922034
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||| ||||||||||    
T  47922233 gggttaggatcctctcaatttatgtgtttctccatttcttcaatttagagagataaagacacgtaaaatattgaaaaaaataaaatatatttaatgatgg 47922134  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    ||  ||||||| ||||||| ||||||| |||||||||||| || ||||| |    ||||||||||| |||||||||||| ||||||  | ||||| ||||    
T  47922133 tggaacccacttagtggtaagacccactatctattttttgtgtttatcttt----aacttgcaaaattccatttattttgccaaataaaaaggatattca 47922038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 108 - 310
Target Start/End: Original strand, 52018700 - 52018882
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||          
T  52018700 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaa------ 52018793  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
                  |||| ||| |||| || |||||||||  ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  52018794 --------------tggtgggatccactatttattttttgtatctatctctctccaacttgcaaaactccatttattttgctaaatggagaggatcttca 52018879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 115 - 305
Target Start/End: Complemental strand, 47922518 - 47922327
Alignment:
Q  115 aatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacc 214  Q
    ||||||| |||||||| | ||| ||||||||| | ||||| || |||| | ||||| ||| | ||||||||||||||| |||||||  |||| || ||||    
T  47922518 aatcctctccatttatttctttatccatttctaccatttgtagtgatataaacacacaaagttttgaaaaaagtaaaaaataattatagatgatgggacc 47922419  T
Q  215 cactcagtggtaggacccaccatctatt-ttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatctt 305  Q
    |||| ||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  47922418 cacttagtggtaggacccaccatctattcttttgtgtctatatctctccaaattgcaaaactcaatttattttagcaaatggagaggatctt 47922327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 107 - 210
Target Start/End: Complemental strand, 17080799 - 17080696
Alignment:
Q  107 ggggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 206  Q
    |||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  17080799 ggggttaggatcccctccatttatgtgtttctccatttcttcaatttggagagataaagacagataaaatcttggaaaaagtaaaatataatgaatgatg 17080700  T
Q  207 gtga 210  Q
    ||||    
T  17080699 gtga 17080696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 12312646 - 12312571
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataat 198  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  12312646 ccatttatgtgtttctccatttcttcaatttagagagataaagacacataaaattttgaaaaaagtaaaatataat 12312571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 136 - 310
Target Start/End: Original strand, 23474056 - 23474229
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    ||||| |||| || ||||||||||||| | ||||| ||||  || |||||| |||||  ||||||||||||||| ||  |||||| | ||||||||||||    
T  23474056 tctccctttcatccatttggagagatataaacacacaaaaaattcaaaaaattaaaaagtaattaatgatggtgggattcactcaatagtaggacccacc 23474155  T
Q  236 atctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||||||||| || ||||||||||| |||| |||| | |||||||||||| | | |||||||||||||||| ||||    
T  23474156 atctattttatgtgtctatctctccccaaattgc-atactccatttattatgctaaatggagaggatctttaccc 23474229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 25442325 - 25442193
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagt-aaaatataattaatgatggtgagacc 214  Q
    |||||| |||||||||   |||||||||||||| ||||||||||||||||||||| | |||  | |||||||| |||| ||||||||||  ||||||| |    
T  25442325 atcctctccatttatggccttctccatttcttccatttggagagataaagacacacacaattataaaaaaagttaaaaaataattaatgtcggtgagatc 25442226  T
Q  215 cactcagtggtaggacccaccatctattttttg 247  Q
    |||| ||||||||||||||| ||||||||||||    
T  25442225 cacttagtggtaggacccacaatctattttttg 25442193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 116 - 271
Target Start/End: Complemental strand, 56269217 - 56269071
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| ||||||||   ||||||||||| ||| |||| |||||||||||||||||||||  |  ||||||       |||||||||||||||| |||||    
T  56269217 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaaagt--aaaaaa-------ataattaatgatggtgggaccc 56269127  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||| |||||||||||||||||  ||||||||| |||||||||||||||| ||||||    
T  56269126 acttagtggtaggacccaccacttattttttgtgtctatctctctccaaattgcaa 56269071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 150 - 303
Target Start/End: Original strand, 1871237 - 1871388
Alignment:
Q  150 atttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttggg 249  Q
    ||||||||||||||||||||| | ||  ||||||||| || || ||||||||||||| || |||||||| ||| |||||| |||| |||||| ||||  |    
T  1871237 atttggagagataaagacacaaagaaatttgaaaaaa-tataaaataattaatgatgatgggacccacttagtagtaggatccactatctatattttttg 1871335  T
Q  250 tctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatc 303  Q
    ||||||||||||||| |||| | ||||||||||||||  ||||| |||||||||    
T  1871336 tctatctctctccaaattgc-atactccatttattttgtcaaattgagaggatc 1871388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 135 - 240
Target Start/End: Complemental strand, 31862351 - 31862246
Alignment:
Q  135 ttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccac 234  Q
    ||||| |||||| | ||||||||||||| ||||||| ||||| ||  ||||||||||| |||||||||||||||| |||||||| |||||||||| ||||    
T  31862351 ttctctatttctaccatttggagagatatagacacacaaaattttagaaaaagtaaaaaataattaatgatggtgggacccacttagtggtaggatccac 31862252  T
Q  235 catcta 240  Q
    ||||||    
T  31862251 catcta 31862246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 283
Target Start/End: Original strand, 26428971 - 26429061
Alignment:
Q  194 ataattaatgatggtgagacccactcagtggtaggacccaccatctatt-ttttgggtctatctctctccaacttgcaaaactccatttat 283  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||| ||||| |||||||| ||||||| |||||||||| |||||||    
T  26428971 ataattaatgatgatgagacccattcagtggtaggactcaccatctattcttttgtgtctatctttctccaaattgcaaaacttcatttat 26429061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 182 - 311
Target Start/End: Complemental strand, 56453904 - 56453776
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccattt 281  Q
    ||||||||||| ||||| |||||||||| |||||||| | || |||||||||||| |||||||||| |||||||||||||||| |||| |   |||||||    
T  56453904 aaaaagtaaaaaataatgaatgatggtgggacccacttaatgataggacccaccacctattttttgtgtctatctctctccaaattgc-atcttccattt 56453806  T
Q  282 attttaccaaatggagaggatcttcacccg 311  Q
    ||||    |||||||||||||||| |||||    
T  56453805 atttctataaatggagaggatcttaacccg 56453776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 34927488 - 34927596
Alignment:
Q  194 ataattaatgatggtgagacccactcagtggtaggacccaccatctatt-ttttgggtctatctctctccaacttgcaaaactccatttattttaccaaa 292  Q
    ||||||||||||| ||||||  ||| | ||||||||||||||||||||| ||||| ||||||||||||  || ||||||||| ||||||||||||  |||    
T  34927488 ataattaatgatgatgagacatacttaatggtaggacccaccatctattcttttgtgtctatctctctttaaattgcaaaaccccatttattttagtaaa 34927587  T
Q  293 tggagagga 301  Q
    |||||||||    
T  34927588 tggagagga 34927596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 5524438 - 5524527
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| |||||||||||||||| |||||||| | || ||||||||||||  ||||||||  |||||||||||||||| ||||||    
T  5524438 aaaaagtaaaaaataattaatgatggtgggacccacttactgataggacccaccacttattttttatgtctatctctctccaaattgcaa 5524527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 33524321 - 33524381
Alignment:
Q  250 tctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  33524321 tctatctctctccaacttccaaatctccatttattttgccaaatggagaggatcttcaccc 33524381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 116 - 271
Target Start/End: Complemental strand, 37002391 - 37002246
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| ||||||||   ||||||||||| ||| |||| |||||||||||||||||||||          ||||||| |||||||||||||||| |||||    
T  37002391 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggaccc 37002302  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||| |||  ||||| ||||||  ||||||||| |||||||||| ||||| ||||||    
T  37002301 acttagtaataggatccaccacttattttttgtgtctatctctttccaaattgcaa 37002246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 303
Target Start/End: Complemental strand, 33841934 - 33841768
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    |||||||||| || ||||||| ||||||||||||| ||||||||||||| |||| |  |||||||||||||||| |||||| | |  |  |  |  |||     
T  33841934 tctccatttcctccatttggaaagataaagacacaaaaaatcttgaaaagagtatacaataattaatgatggtgggacccatttatcgaaaccattcact 33841835  T
Q  236 atctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatc 303  Q
    ||  |||||||| |||||||||||||||| |||  | |||||||||| |||| |||||||||||||||    
T  33841834 attaattttttgtgtctatctctctccaaattg-tatactccatttactttaacaaatggagaggatc 33841768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 43447724 - 43447638
Alignment:
Q  122 cccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaa-tcttgaaaaaagtaaaatataattaatgatggt 208  Q
    ||||||||||| |||||| ||| |||  |||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  43447724 cccatttatgtctttctctatt-cttttatttcgagagataaagacacataaaaattttgaaaaaagtaaaatataattaatgatggt 43447638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 42010108 - 42010197
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| |||||||||||||||| |||||| | |||| |||||||| |||  |||||||||  ||||||||||||||| ||||||    
T  42010108 aaaaagtaaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtatctatctctctccaaattgcaa 42010197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 26428575 - 26428650
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataat 198  Q
    ||||||||||  |||||||||||| ||||||||||||||| ||||||| ||| | ||||||||||||||| |||||    
T  26428575 ccatttatgtccttctccatttctacaatttggagagatatagacacacaaatttttgaaaaaagtaaaaaataat 26428650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 36688260 - 36688183
Alignment:
Q  194 ataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    |||||||||||||||| |||||||| |||| |||||| || ||  ||||||||| |||||||||||||||| ||||||    
T  36688260 ataattaatgatggtgggacccacttagtgataggactcaacacttattttttgtgtctatctctctccaaattgcaa 36688183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 305
Target Start/End: Original strand, 36532616 - 36532738
Alignment:
Q  181 aaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatt 280  Q
    |||||||||||| ||||||||| ||||||  ||||||| | || ||||| |||| || |||||| || ||||||||||||| || |||  || |||||||    
T  36532616 aaaaaagtaaaaaataattaat-atggtggaacccactgaatgataggatccactatttattttatgtgtctatctctctctaaattgtgaa-ctccatt 36532713  T
Q  281 tattttaccaaatggagaggatctt 305  Q
    ||||||| || ||||||||||||||    
T  36532714 tattttatcagatggagaggatctt 36532738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 3326441 - 3326535
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagat-aaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtg 209  Q
    |||||| ||||||||||  | ||||||||||| ||||| ||||||| ||||||| | ||| | ||||||||||||||| ||||||||| ||||||    
T  3326441 atcctctccatttatgtcctcctccatttctttaattttgagagataaaagacaaaaaaagttttgaaaaaagtaaaaaataattaataatggtg 3326535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 48084609 - 48084533
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctct 258  Q
    ||||||||||| |||||||||||||||| |||||||| |||| ||| ||||||||  ||| ||||  ||||||||||    
T  48084609 aaaaagtaaaaaataattaatgatggtgggacccacttagtgctagaacccaccacttatgttttatgtctatctct 48084533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 1015931 - 1015849
Alignment:
Q  189 aaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    |||| |||||||||||||||| |||||||  | || | ||||||||||  ||||||||| ||||||||||||| || ||||||    
T  1015931 aaaaaataattaatgatggtgggacccacctaatgatgggacccaccacttattttttgtgtctatctctctctaaattgcaa 1015849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 303
Target Start/End: Complemental strand, 42844312 - 42844151
Alignment:
Q  141 atttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatcta 240  Q
    ||||| || ||||||||||||| |||  || ||||  || |||||||||||| |||||||||||||| | || ||| | | | ||||||| |||  ||||    
T  42844312 atttcatccatttggagagatatagattcaaaaaagtttaaaaaaagtaaaaaataattaatgatggagggatccatttaatagtaggacacactctcta 42844213  T
Q  241 ttttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatc 303  Q
    |||| || |||||||| ||||||| |||   ||||| ||||||||||  | ||||||||||||    
T  42844212 ttttatgtgtctatctatctccaaattg-ttaactctatttattttataatatggagaggatc 42844151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 17080811 - 17080856
Alignment:
Q  189 aaaatataattaatgatggtgagacccactcagtggtaggacccac 234  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||    
T  17080811 aaaaaataattaatgatggtgagactcactcaatggtaggacccac 17080856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 170
Target Start/End: Complemental strand, 16567447 - 16567388
Alignment:
Q  111 ttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacaca 170  Q
    |||||||||||  ||||||||| | |||| |||||||||||||| | |||||||||||||    
T  16567447 ttagaatcctctacatttatgtttctctcaatttcttcaatttgaaaagataaagacaca 16567388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 28701907 - 28701836
Alignment:
Q  194 ataattaatgatggtgagacccactcagtggtaggacccaccatcta-ttttttgggtctatctctctccaa 264  Q
    ||||||||||||||||||||||||| |||| |  |||||||||  || ||||||  ||||||||||||||||    
T  28701907 ataattaatgatggtgagacccacttagtgatttgacccaccacttatttttttttgtctatctctctccaa 28701836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 48914596 - 48914474
Alignment:
Q  188 taaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttatttta 287  Q
    ||||| |||||||||||| | |  |||||||   || |||||||||| ||||||||| || ||| ||||||||| || |||||   |||||||||||||     
T  48914596 taaaaaataattaatgatagcggaacccactttatgataggacccacaatctattttatgtgtcgatctctctctaaattgcatt-ctccatttattttg 48914498  T
Q  288 ccaaatggagaggatcttcacccg 311  Q
    | ||||||||| |||||| |||||    
T  48914497 ctaaatggagaagatctttacccg 48914474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 2275276 - 2275354
Alignment:
Q  134 tttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgaga 212  Q
    |||||||| ||| || ||||| | ||||||||||| | |||||||||||| ||||| || ||||||||||  |||||||    
T  2275276 tttctccaattcctccatttgaaaagataaagacataaaaaatcttgaaataagtataaaataattaatgcaggtgaga 2275354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 32366498 - 32366432
Alignment:
Q  135 ttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaa 201  Q
    |||||||||||||| |||| |||||| |||||| | || ||| || |||||||||||| ||||||||    
T  32366498 ttctccatttcttctatttagagagacaaagacgcgtagaattttaaaaaaagtaaaaaataattaa 32366432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 5361457 - 5361506
Alignment:
Q  222 tggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    |||| ||||||||||  ||||||||| |||||||||||||||| ||||||    
T  5361457 tggtgggacccaccacttattttttgtgtctatctctctccaaattgcaa 5361506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 17493010 - 17493083
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatctattttttgg-gtctatctctctccaacttgcaa 271  Q
    |||||||||||  | ||||| |||| ||||||||||||  |||||||| | |||||||||||||||| ||||||    
T  17493010 taatgatggtggaatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 17493083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 32146510 - 32146583
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatcta-ttttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| || ||||| |||| ||||||||||||  || |||||||  ||||||||||||||| ||||||    
T  32146510 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtatctatctctctccaaattgcaa 32146583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 46238974 - 46239047
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatcta-ttttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| || ||||| |||| ||||||||||||  || ||||||| |||||||||||| ||| ||||||    
T  46238974 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctcttcaaattgcaa 46239047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 53526096 - 53526169
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatcta-ttttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| || ||||| |||| ||||||||||||  || ||||||  |||||||||||||||| ||||||    
T  53526096 taatgatggtgggatccacttagtgataggacccaccacttatttttttttgtctatctctctccaaattgcaa 53526169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 55160438 - 55160365
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatcta-ttttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| || ||||| |||| ||||||||||||  || ||||||| |||||||||| ||||| ||||||    
T  55160438 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctttccaaattgcaa 55160365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 4404281 - 4404333
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccac 234  Q
    |||||||||||  ||||||||||||||||||| |||| | || ||||||||||    
T  4404281 aaaaagtaaaaattaattaatgatggtgagacacacttaatgataggacccac 4404333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 25219003 - 25219070
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccacca--tctattttttgggtctatctctctccaa 264  Q
    ||||||||||| || ||||| |||| ||||||||||||  | | ||||||| ||||||||||||||||    
T  25219003 taatgatggtgggatccacttagtgataggacccaccacttattttttttgtgtctatctctctccaa 25219070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 339
Target Start/End: Complemental strand, 25432373 - 25432345
Alignment:
Q  311 gcaaactcctagcttcttctttaaaaatt 339  Q
    |||||||||||||||||||||||||||||    
T  25432373 gcaaactcctagcttcttctttaaaaatt 25432345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 168; Significance: 7e-90; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 107 - 310
Target Start/End: Original strand, 4804364 - 4804567
Alignment:
Q  107 ggggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 206  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4804364 ggggttaggatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatg 4804463  T
Q  207 gtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttc 306  Q
    ||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  4804464 gtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttc 4804563  T
Q  307 accc 310  Q
    ||||    
T  4804564 accc 4804567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 107 - 310
Target Start/End: Original strand, 7162000 - 7162203
Alignment:
Q  107 ggggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 206  Q
    |||||||| |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7162000 ggggttaggatcctctctatttacgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 7162099  T
Q  207 gtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttc 306  Q
    ||| |||||||| ||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  7162100 gtgggacccacttagtagtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttc 7162199  T
Q  307 accc 310  Q
    ||||    
T  7162200 accc 7162203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 107 - 309
Target Start/End: Complemental strand, 1249305 - 1249105
Alignment:
Q  107 ggggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 206  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1249305 ggggttaagatcctctccatttatgtgtttctccatttcttcaatttggaaagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 1249206  T
Q  207 gtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttc 306  Q
    ||| |||||||| |||||||||||||||||||||||||||  |||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  1249205 gtgggacccacttagtggtaggacccaccatctatttttt--gtctgtctctctccaacttacaaaactccatttattttgccaaatggagaggatcttc 1249108  T
Q  307 acc 309  Q
    |||    
T  1249107 acc 1249105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 107 - 310
Target Start/End: Complemental strand, 21159524 - 21159325
Alignment:
Q  107 ggggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 206  Q
    |||||||| |||||| || |||||||||    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21159524 ggggttaggatcctctccgtttatgtgt----ccatttcttcaatttggagatataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 21159429  T
Q  207 gtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttc 306  Q
    ||| |||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21159428 gtgggacccacttagtggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaaacttcatttattttaacaaatggagaggatcttc 21159329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 131 - 310
Target Start/End: Original strand, 17944102 - 17944281
Alignment:
Q  131 gtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggac 230  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||| | |||||||||||    
T  17944102 gtgtttctccatttcttcaatttggagagataaaaacacataaaatcttggaaaaagtaaaatataattaatgatggtgggacccatttagtggtaggac 17944201  T
Q  231 ccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    | ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  17944202 ctaccatctattttttgtgtctatctctctccaacttacaaaactccatttattttgccaaatgaagaggatcttcaccc 17944281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 136 - 310
Target Start/End: Original strand, 12412582 - 12412756
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    ||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  12412582 tctccatttcttcaatttggagagataaaaatacataaaattttgaaaaaagtaaaatataattaatgatggtggaacccacttagtggtaggacccacc 12412681  T
Q  236 atctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  12412682 atctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaagatctttaccc 12412756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 116 - 312
Target Start/End: Original strand, 27826463 - 27826659
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| ||||||||||||||||| |||||||| |||| |||||||||||||||||||||  ||  ||||| |||||||||||||||||||||| |||||    
T  27826463 atcctctccatttatgtgtttctcaatttcttccattttgagagataaagacacataaaaaattttaaaaaataaaatataattaatgatggtgggaccc 27826562  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccgc 312  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||| | |||||||| || || |||||||||||||||||||||||||||| ||||    
T  27826563 acttagtggtaggacccaccatctattttttgtgtctatctctctcaaccttgcaaatcttcagttattttaccaaatggagaggatcttcatccgc 27826659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 29698080 - 29698219
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29698080 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagaaataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 29698179  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttg 247  Q
    || |||||||| | |||||||| |||||||||||||||||    
T  29698180 tgggacccacttaatggtaggatccaccatctattttttg 29698219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 108 - 310
Target Start/End: Original strand, 32737791 - 32737976
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32737791 gggttaggatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 32737890  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    ||                 | ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  32737891 tg-----------------gaacccaccatctattttttgtgtctatctctctccaacctgcaaaactctatttattttgccaaatggagaggatcttca 32737973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 115 - 307
Target Start/End: Complemental strand, 227715 - 227522
Alignment:
Q  115 aatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacc 214  Q
    |||||||  |||||||||| |||||||||||| ||||||||||||||| ||||||| ||| | |||||||| |||||| ||||| ||||||| || || |    
T  227715 aatcctcttcatttatgtgcttctccatttctacaatttggagagatatagacacacaaagttttgaaaaaggtaaaaaataatcaatgatgatgggatc 227616  T
Q  215 cactcagtggtaggacccaccatctatt-ttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||    
T  227615 cacttagtggtaggacccaccatctattcttttgtgtctatctctctccaaaatgcaaaactccatttattttagcaaatggagaggatcttca 227522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 166 - 311
Target Start/End: Complemental strand, 13089849 - 13089704
Alignment:
Q  166 acacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaac 265  Q
    ||||||||||| ||||||||| |||||||||||||||||||||| | |||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  13089849 acacataaaattttgaaaaaaataaaatataattaatgatggtggggcccacttagtggtaggacccaccatctatattttgtgtctatctctctccaac 13089750  T
Q  266 ttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  13089749 ttgcaaaacaccatttattttgccaaatggagaggatcttcacccg 13089704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 134 - 311
Target Start/End: Original strand, 30460763 - 30460943
Alignment:
Q  134 tttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggta----gga 229  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | || | ||| || | | |||||    |||    
T  30460763 tttcttcatttcttctatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaataacggcgggactcatttaatggtaggatgga 30460862  T
Q  230 cccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
     ||| || ||| |||||| |||||||| ||||||| |||| ||||||||||||||||  |||||||||| ||| || |||||    
T  30460863 tccatcaactactttttgtgtctatctttctccaaattgc-aaactccatttattttgtcaaatggagatgatgttaacccg 30460943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 136 - 302
Target Start/End: Complemental strand, 7215981 - 7215816
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    |||||||||||||| |||||||||||| |||| || |   ||||  |||||||||||  ||||||||||| ||| |||||| | |||||||||||||||     
T  7215981 tctccatttcttca-tttggagagatatagactcaaattttcttagaaaaagtaaaacgtaattaatgatagtgggacccaattagtggtaggacccact 7215883  T
Q  236 atctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggat 302  Q
    ||||||||| || |||||||||||||||| |||   |  ||||||||||||| ||||||||||||||    
T  7215882 atctattttatgtgtctatctctctccaaattgtgcacttccatttattttatcaaatggagaggat 7215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 136 - 303
Target Start/End: Complemental strand, 2800740 - 2800574
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    ||||||||||| || |||||||||||| | || || ||||  ||||||||||||||| ||||| |||||||||| |||||||| | ||||| || ||||     
T  2800740 tctccatttctcca-tttggagagatataaactcaaaaaaaattgaaaaaagtaaaaaataatcaatgatggtgggacccacttaatggtatgatccact 2800642  T
Q  236 atctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatc 303  Q
    ||||||||| || |||||||||||||||| |||   |  |||||| |||||| |||||||||||||||    
T  2800641 atctattttatgtgtctatctctctccaaattgtgtatttccattaattttatcaaatggagaggatc 2800574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 310
Target Start/End: Complemental strand, 13888603 - 13888478
Alignment:
Q  186 agtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctatt-ttttgggtctatctctctccaacttgcaaaactccatttatt 284  Q
    ||||||| ||||||||||||| || |||||| | | |||||||| |||||||||||| ||||| || ||||||||||||| ||||||||||| |||||||    
T  13888603 agtaaaaaataattaatgatgatgggacccagttaatggtaggaaccaccatctattattttgtgtatatctctctccaaattgcaaaactctatttatt 13888504  T
Q  285 ttaccaaatggagaggatcttcaccc 310  Q
    ||| || || ||||||||||| ||||    
T  13888503 ttagcatattgagaggatcttaaccc 13888478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 24484870 - 24484959
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| |||||||||||||||| |||||||| |||| ||||||||||||  ||||||||| |||||||||||||||| ||||||    
T  24484870 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattgcaa 24484959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 1518404 - 1518251
Alignment:
Q  140 catttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatct 239  Q
    ||||||||  ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||                 ||| |||||||||    
T  1518404 catttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatggtg-----------------ggatccaccatct 1518322  T
Q  240 attttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    ||||||||  || |||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| |||||    
T  1518321 attttttgtatccatctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaacccg 1518251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 311
Target Start/End: Complemental strand, 1516314 - 1516162
Alignment:
Q  141 atttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatcta 240  Q
    |||||||  ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||                 ||| ||||||||||    
T  1516314 atttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatggtg-----------------ggatccaccatcta 1516232  T
Q  241 ttttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    |||||||  || |||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| |||||    
T  1516231 ttttttgtatccatctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaacccg 1516162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 310
Target Start/End: Complemental strand, 17828698 - 17828525
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    |||||||||| |  |||||||| |||| ||||||| ||||  || |||||| |||||  |||||| ||||| || || ||||| | | |||| | ||||     
T  17828698 tctccatttcattcatttggagtgatatagacacacaaaaatttcaaaaaactaaaaattaattattgatgatgggatccacttaatagtagaatccact 17828599  T
Q  236 atctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||||||||| || |||||||||||||||| |||| | |||||| ||||| ||||||||| |||||||||| ||||    
T  17828598 atctattttatgtgtctatctctctccaaattgc-atactccaattattataccaaatgtagaggatctttaccc 17828525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 2142377 - 2142288
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| ||||||||||||||||  ||||||  | || | ||||||||||  ||||||||| |||||||||||||||| ||||||    
T  2142377 aaaaagtaaaaaataattaatgatggtggaacccacctaatgatgggacccaccacttattttttgtgtctatctctctccaaattgcaa 2142288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 17398824 - 17398774
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaa 186  Q
    ||||| |||| || |||||||||||||||||||||||||||||||||||||    
T  17398824 tctccctttcctccatttggagagataaagacacataaaatcttgaaaaaa 17398774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 310
Target Start/End: Complemental strand, 1515576 - 1515498
Alignment:
Q  231 ccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||||||||||||||||   || |||||||||||| ||||||| ||||||||||||| |||||| || |||||||| ||||    
T  1515576 ccaccatctattttttttatccatctctctccaaattgcaaa-ctccatttattttgccaaattgataggatcttaaccc 1515498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 28696782 - 28696688
Alignment:
Q  124 catttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccact 218  Q
    ||||||||||| |||||||||||   ||||||||||||||||||||| ||||  ||  |||||| | || |||||||||||| |||  |||||||    
T  28696782 catttatgtgtctctccatttctatcatttggagagataaagacacaaaaaagtttagaaaaagaataaaataattaatgatcgtggaacccact 28696688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 7545645 - 7545718
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatctattttttgg-gtctatctctctccaacttgcaa 271  Q
    ||||||| ||| || ||||| |||| ||||||||||||  |||||||||| |||||||||||||||| ||||||    
T  7545645 taatgatagtgggatccacttagtgataggacccaccacttattttttggtgtctatctctctccaaattgcaa 7545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 29229152 - 29229204
Alignment:
Q  249 gtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggat 302  Q
    |||||||||||||||| ||||| | ||||||||||| |||||||||||||||||    
T  29229152 gtctatctctctccaaattgcata-ctccatttattataccaaatggagaggat 29229204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 17275921 - 17275981
Alignment:
Q  141 atttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaa 201  Q
    |||| ||| |||||||||||||||||  ||||||||||| |||||| ||||| ||||||||    
T  17275921 atttattctatttggagagataaagatgcataaaatcttaaaaaaaataaaaaataattaa 17275981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 32254115 - 32254033
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaa 264  Q
    ||||| ||||| |||||||||||| ||| ||| |||| | || |||||||||||| || ||||||  ||||||||| ||||||    
T  32254115 aaaaaataaaaaataattaatgatagtgggactcacttaatgataggacccaccaccttttttttttgtctatctccctccaa 32254033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 7098263 - 7098190
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatcta-ttttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| || ||||| |||| ||||||||||||  || ||||||  |||||||||||||||| ||||||    
T  7098263 taatgatggtgggatccacttagtgataggacccaccacttatttttttttgtctatctctctccaaattgcaa 7098190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 28696672 - 28696624
Alignment:
Q  249 gtctatctctctccaacttgcaaaactccatttattttaccaaatggaga 298  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||||||||    
T  28696672 gtctatctctctccaaattgcaaa-ctcaatttattttgccaaatggaga 28696624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 3177061 - 3177093
Alignment:
Q  277 catttattttaccaaatggagaggatcttcacc 309  Q
    ||||||||||| |||||||||||||||||||||    
T  3177061 catttattttatcaaatggagaggatcttcacc 3177093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 31708334 - 31708250
Alignment:
Q  125 atttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaat-ataattaatgatggt 208  Q
    |||||||| |||||||||||||   ||||| ||||||| ||||||| ||||| || ||||||  ||||| | |||||||||||||    
T  31708334 atttatgtttttctccatttctatcatttgaagagatatagacacacaaaatttttaaaaaataaaaataaaaattaatgatggt 31708250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 168; Significance: 7e-90; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 116 - 311
Target Start/End: Complemental strand, 35660759 - 35660564
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35660759 atcctctctatttatgtgtttctccgtttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 35660660  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35660659 acttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccg 35660564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 108 - 310
Target Start/End: Original strand, 37266648 - 37266850
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37266648 gggttaggatcctctccatttacgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaactaaaatataattaatgatgg 37266747  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37266748 tgggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 37266847  T
Q  308 ccc 310  Q
    |||    
T  37266848 ccc 37266850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 108 - 310
Target Start/End: Complemental strand, 32129775 - 32129573
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32129775 gggttaggatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 32129676  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  32129675 tgggacccacttagtggtaggacccaccatctatttttggtgtctatctctctccaacttataaaactccatttattttgccaaatggagaggatcttca 32129576  T
Q  308 ccc 310  Q
    |||    
T  32129575 ccc 32129573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 116 - 307
Target Start/End: Original strand, 11775717 - 11775909
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaa-aagtaaaatataattaatgatggtgagacc 214  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| ||||    
T  11775717 atcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaaagtaaaatataattaatgacggtgggacc 11775816  T
Q  215 cactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11775817 cacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 11775909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 108 - 310
Target Start/End: Original strand, 13032036 - 13032237
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  13032036 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaa-taaaatataattaatgatgg 13032134  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||| | ||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13032135 tgggacccatttagtggtaggactcaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 13032234  T
Q  308 ccc 310  Q
    |||    
T  13032235 ccc 13032237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 4895893 - 4895699
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4895893 gggttaggatcctcttcatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 4895794  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggat 302  Q
    || |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||  |||||||    
T  4895793 tgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaataaagaggat 4895699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 123 - 310
Target Start/End: Original strand, 14349736 - 14349922
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagt 222  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||    
T  14349736 ccatttatgtgtttctccatttctttaatttggaaagataaagacacataaa-tcttgaaaaaagtaaaatataattaatgatggtgggacccacttagt 14349834  T
Q  223 ggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  14349835 ggtaggacccaccatctattttttgtgtctgtctctctccaacttacaaaactccatttattttaccaaatagagaggatcttcaccc 14349922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 116 - 310
Target Start/End: Complemental strand, 18625571 - 18625377
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| |||||||||||||| || |||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  18625571 atcctctccatttatgtgtttttcaatttctttcatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggaccc 18625472  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  18625471 acttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 18625377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 108 - 310
Target Start/End: Complemental strand, 40753320 - 40753118
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  40753320 gggttaggatcctctccatttatgtgcttctccatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 40753221  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||||| |||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||  ||||||||| |||||| |||||||||||||    
T  40753220 tgggacccacttagtggtaggacccaccatatattttttgtgtctatctttctccaacttgcaaaactttatttattttgccaaatagagaggatcttca 40753121  T
Q  308 ccc 310  Q
    |||    
T  40753120 ccc 40753118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 116 - 310
Target Start/End: Original strand, 39902340 - 39902534
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  | ||    
T  39902340 atcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaatcc 39902439  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    | | |||||||||||||||||||||||| ||| || ||||||||||||||||| |||||||||||||||||  ||||||||||||| ||||||||    
T  39902440 atttagtggtaggacccaccatctatttcttgtgtttatctctctccaacttgtaaaactccatttattttgtcaaatggagaggaacttcaccc 39902534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 108 - 310
Target Start/End: Original strand, 34827111 - 34827311
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaa-aagtaaaatataattaatgatg 206  Q
    ||||||| |||||| |||||||| ||||| |||||||||| |||||| |||||||||||||||  |||| ||||||| ||||||||||||||||| ||||    
T  34827111 gggttaggatcctcaccatttatatgttt-tccatttcttaaatttgaagagataaagacaca--aaattttgaaaaaaagtaaaatataattaaagatg 34827207  T
Q  207 gtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttc 306  Q
    ||| |||||||| |||||||||| ||||||||||||||||  |||||||||||||||||||||| ||||||||||||||| | ||||||||| |||||||    
T  34827208 gtgggacccacttagtggtaggatccaccatctattttttttgtctatctctctccaacttgcataactccatttattttgctaaatggagatgatcttc 34827307  T
Q  307 accc 310  Q
    ||||    
T  34827308 accc 34827311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 108 - 294
Target Start/End: Complemental strand, 8441129 - 8440943
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| ||| || |||||||||||||||||| |||| |||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||    
T  8441129 gggttaggatcatctccatttatgtgtttctccgtttcatcaatttggagagataaatacacatacaatcttaaaaaaagtaaaatataattaatgatgg 8441030  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatg 294  Q
    || ||| |||| ||||||| | | |||||||||||||| | ||||||||  |||||||||||||||||||||||||||| |||||||    
T  8441029 tgggacacacttagtggtatgtcgcaccatctatttttggtgtctatctacctccaacttgcaaaactccatttattttgccaaatg 8440943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 4592719 - 4592856
Alignment:
Q  109 ggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggt 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  4592719 ggttagaatcctctccatttatgtgtttctccatttcttcaatttggagagataat-acacataaaatattgaaaaaagtaaaatataattaatgatggt 4592817  T
Q  209 gagacccactcagtggtaggacccaccatctattttttg 247  Q
    | |||||||| ||||||| ||||||||||||||||||||    
T  4592818 gggacccacttagtggtaagacccaccatctattttttg 4592856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 1475796 - 1475686
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| ||||||  ||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1475796 gggttaggatcctcttcatttatgtgttttttcatttcttcaatttggagtgataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 1475697  T
Q  208 tgagacccact 218  Q
    || ||||||||    
T  1475696 tgggacccact 1475686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 135 - 308
Target Start/End: Original strand, 43309062 - 43309225
Alignment:
Q  135 ttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccac 234  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||          |||||||||||||  ||||| | | ||||| || ||||    
T  43309062 ttctccatttcttcaatttgaagagataaagacacataaaatcttgaaaaaa----------attaatgatggtggaacccatttaatggtaagatccac 43309151  T
Q  235 catctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcac 308  Q
     |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  43309152 tatctattttttatgtctatctctctccaacttgcaaaactccatttattttatcaaataaagaggatcttcac 43309225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 123 - 312
Target Start/End: Original strand, 3057348 - 3057536
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagt 222  Q
    |||||||||| | ||||  ||||||| |||| |||||||||||||||| ||||  |||||||||||| || ||||||||||||| ||  || ||||  ||    
T  3057348 ccatttatgtttctctcactttcttccattttgagagataaagacacaaaaaagtttgaaaaaagtataaaataattaatgatgatggaactcactttgt 3057447  T
Q  223 ggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccgc 312  Q
    ||||||| ||| ||||| ||||||  |||||||||||||| | ||| ||||||| ||||||||||| |||||||||||||||| ||||||    
T  3057448 ggtaggatccatcatcttttttttttgtctatctctctccgaattg-aaaactctatttattttacaaaatggagaggatcttaacccgc 3057536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 3057293 - 3057134
Alignment:
Q  127 ttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggta 226  Q
    |||||| | ||||||||||||| ||||| |||||||||||||| |||| | || |||||||||||||||||||||||||  || ||| |||| | |||||    
T  3057293 ttatgtctctctccatttcttctatttgaagagataaagacacttaaattttttaaaaaagtaaaatataattaatgattatgtgactcacttaatggta 3057194  T
Q  227 ggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttatttta 287  Q
    ||| ||||||||||||||||| || ||||||| ||||| |||| ||| |||||||||||||    
T  3057193 ggatccaccatctattttttgtgtttatctctatccaaattgc-aaattccatttatttta 3057134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 195 - 311
Target Start/End: Original strand, 29340999 - 29341114
Alignment:
Q  195 taattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatg 294  Q
    ||||||||||||||| |||||||| | | ||||||||||| ||||||||| || |||||||||||||||| |||| | |||||||||||| |||||||||    
T  29340999 taattaatgatggtgggacccacttaatagtaggacccactatctattttctgtgtctatctctctccaaattgc-atactccatttattataccaaatg 29341097  T
Q  295 gagaggatcttcacccg 311  Q
    ||||||||||| |||||    
T  29341098 gagaggatctttacccg 29341114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 141 - 305
Target Start/End: Original strand, 32793324 - 32793487
Alignment:
Q  141 atttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatcta 240  Q
    |||||||  ||||| ||||||||||||  |||||||||||||||||||||||||||||| ||||| ||| |||| ||| ||| ||| ||  || ||||||    
T  32793324 atttctttcatttgaagagataaagacgaataaaatcttgaaaaaagtaaaatataattgatgattgtgggacctacttagtagtaagaatcatcatcta 32793423  T
Q  241 ttttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatctt 305  Q
    ||||||| || |||||||||| || |||  |||||||||||||||| | |||| || ||||||||    
T  32793424 ttttttgtgtatatctctctctaaattg-taaactccatttattttgctaaatagataggatctt 32793487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 36290593 - 36290682
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| |||||||||||||||| || ||||| |||| ||||||||||||  ||||||||| |||||||||||||||| ||||||    
T  36290593 aaaaagtaaaaaataattaatgatggtgggatccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattgcaa 36290682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 182 - 303
Target Start/End: Original strand, 18653352 - 18653472
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccattt 281  Q
    |||||||| || ||||||| | |||||||||| |||| | |||||| || ||| |||||||||||| |||||||||||| ||| |||| |||||||||||    
T  18653352 aaaaagtataaaataattattaatggtgagactcacttaatggtagaactcactatctattttttgtgtctatctctcttcaaattgc-aaactccattt 18653450  T
Q  282 attttaccaaatggagaggatc 303  Q
    |||||  ||| | |||||||||    
T  18653451 attttgacaatttgagaggatc 18653472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 10173873 - 10173961
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggt 208  Q
    |||||| ||||||||||  ||||||||||| |  ||||||||||||||||||||    ||| ||||||||||||||| |||||||||||||||    
T  10173873 atcctctccatttatgtccttctccatttccttcatttggagagataaagacac----aattttgaaaaaagtaaaaaataattaatgatggt 10173961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 234
Target Start/End: Complemental strand, 28142901 - 28142807
Alignment:
Q  142 tttcttcaatttggagagataaagacacataaaa-tcttgaaaaaa-gtaaaatataattaatgatggtgagacccactcagtggtaggacccac 234  Q
    ||||||| ||||||| ||  |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| |||| | |||||||| ||||    
T  28142901 tttcttccatttggaaaggcaaagacacataaaaatcttgaaaaaaagtaaaatataattaatgatggtgggactcacttaatggtaggatccac 28142807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 41660100 - 41660186
Alignment:
Q  185 aagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    |||||||| |||||||||||||||| |||||||  |||| |  |||||||||  ||||||||| |||||||||||||||| ||||||    
T  41660100 aagtaaaaaataattaatgatggtgggacccacctagtgatgagacccaccacttattttttgtgtctatctctctccaaattgcaa 41660186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 310
Target Start/End: Complemental strand, 10362097 - 10361971
Alignment:
Q  183 aaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccattta 282  Q
    |||||||||| ||||||||||| ||||||||||||| | |||||||| |||| | | ||||| ||  ||||||||||||| | |||| |   ||||||||    
T  10362097 aaaagtaaaaaataattaatgacggtgagacccacttaatggtaggatccactaccaattttatgtctctatctctctcctaattgc-atcttccattta 10361999  T
Q  283 ttttaccaaatggagaggatcttcaccc 310  Q
     |||   |||||||||||||||||||||    
T  10361998 gttttataaatggagaggatcttcaccc 10361971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 310
Target Start/End: Original strand, 31653039 - 31653153
Alignment:
Q  195 taattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatg 294  Q
    ||||||||||| ||||||| |||| | | ||||||| | | ||||||||| || || ||||||||||||| |||| | || ||||||||| |||||||||    
T  31653039 taattaatgattgtgagactcacttaatagtaggactcgctatctattttatgtgtttatctctctccaaattgc-atacgccatttattataccaaatg 31653137  T
Q  295 gagaggatcttcaccc 310  Q
    || |||||||| ||||    
T  31653138 gataggatctttaccc 31653153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 311
Target Start/End: Original strand, 31546431 - 31546605
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    |||| ||||| |||||||||||||||| || |||| | ||  ||  ||||| |||||  |||||||| ||| || || ||||| | | ||||| ||||||    
T  31546431 tctctatttcatcaatttggagagatatagtcacaaacaaatttcgaaaaactaaaaagtaattaattatgatgggatccacttaatagtagggcccacc 31546530  T
Q  236 atctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    ||||||||| |  ||||| |||||| ||| |||| | |||||||||||| | |||||||| || |||||| |||||    
T  31546531 atctattttatatgtctacctctcttcaaattgc-atactccatttattatgccaaatggggatgatctttacccg 31546605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 303
Target Start/End: Complemental strand, 9460652 - 9460599
Alignment:
Q  249 gtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatc 303  Q
    |||||||||||||||| ||||| | ||| ||||||||||||||||||||||||||    
T  9460652 gtctatctctctccaaattgcata-ctctatttattttaccaaatggagaggatc 9460599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 3041391 - 3041302
Alignment:
Q  183 aaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacca-tctattttttgggtctatctctctccaacttgcaa 271  Q
    |||| ||||| |||||||||||||||| ||||| || |||| |||||||||||| |   |||||||  ||||||||||||||| ||||||    
T  3041391 aaaaataaaaaataattaatgatggtgggacccgcttagtgataggacccaccacttgtttttttgtatctatctctctccaaattgcaa 3041302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 260
Target Start/End: Original strand, 14688519 - 14688643
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    |||| |||||||| ||||||||||||||||||| | ||||  || |||||||| ||| |||  |||||||||||  | ||||| | |||||| | |||      
T  14688519 tctctatttcttccatttggagagataaagacatacaaaaatttaaaaaaagtcaaaaatatctaatgatggtggaatccacttaatggtagaatccaat 14688618  T
Q  236 atctattttttgggtctatctctct 260  Q
    ||||||||| || ||| ||||||||    
T  14688619 atctattttatgtgtcgatctctct 14688643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 27428949 - 27428877
Alignment:
Q  198 ttaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgca 270  Q
    ||||||||||||  || |||| | ||||||||  |||||||||||||||| |||||||||| ||||| |||||    
T  27428949 ttaatgatggtggaactcacttaatggtaggattcaccatctattttttgtgtctatctctttccaaattgca 27428877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 43222129 - 43222193
Alignment:
Q  194 ataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctct 258  Q
    |||||||||||||||| || ||| | | || || |||||||||||||||||||| ||||||||||    
T  43222129 ataattaatgatggtgggatccatttaatgataagacccaccatctattttttgtgtctatctct 43222193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 17247397 - 17247476
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctc 261  Q
    ||||||||||| ||||||||| ||| ||  || |||| | || ||| |||||||| |||||||||| |||||||||||||    
T  17247397 aaaaagtaaaaaataattaattatgatggaacgcacttaatgatagaacccaccacctattttttgcgtctatctctctc 17247476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 35650352 - 35650430
Alignment:
Q  225 taggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatct 304  Q
    |||||||||||| |||||||||| |||||||| | | | | |||| || ||||||||||||||  |||||||||||||||    
T  35650352 taggacccaccacctattttttgtgtctatcttttttctaattgc-aatctccatttattttaataaatggagaggatct 35650430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 2984474 - 2984392
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaa 264  Q
    ||||| ||||| |||||||||||||||| |||||| | |||| |||||  || ||  |||||| || ||||||||||||||||    
T  2984474 aaaaaataaaaaataattaatgatggtgggacccatttagtgataggattcatcacttattttatgtgtctatctctctccaa 2984392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 23253736 - 23253778
Alignment:
Q  134 tttctccatttcttcaatttggagagataaagacacataaaat 176  Q
    ||||||||||||| | ||||||||||||| |||||||||||||    
T  23253736 tttctccatttctaccatttggagagatagagacacataaaat 23253778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 30355218 - 30355256
Alignment:
Q  141 atttcttcaatttggagagataaagacacataaaatctt 179  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  30355218 atttctttaatttggagagataaagacacaaaaaatctt 30355256  T

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Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 10242766 - 10242811
Alignment:
Q  125 atttatgtgtttctccatttcttcaatttggagagataaagacaca 170  Q
    |||||||| | ||||||||||| | |||||||||||||||||||||    
T  10242766 atttatgtttctctccatttctaccatttggagagataaagacaca 10242811  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 339
Target Start/End: Original strand, 20330411 - 20330439
Alignment:
Q  311 gcaaactcctagcttcttctttaaaaatt 339  Q
    |||||||||||||||||||||||||||||    
T  20330411 gcaaactcctagcttcttctttaaaaatt 20330439  T

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Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 38283868 - 38283828
Alignment:
Q  134 tttctccatttcttcaatttggagagataaagacacataaa 174  Q
    ||||||||||| | ||||||||||||||| |||||||||||    
T  38283868 tttctccatttttacaatttggagagatatagacacataaa 38283828  T

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Target: chr2 (Bit Score: 168; Significance: 7e-90; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 108 - 311
Target Start/End: Original strand, 35316742 - 35316945
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35316742 gggttaggatcctctccatttacgtgtttctccatttcttcaatttggagagataaagacatataaaatcttgaaaaaagtaaaatataattaatgatgg 35316841  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35316842 tgggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 35316941  T
Q  308 cccg 311  Q
    ||||    
T  35316942 cccg 35316945  T

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Target: chr2; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 116 - 315
Target Start/End: Original strand, 28564816 - 28565016
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttg-aaaaaagtaaaatataattaatgatggtgagacc 214  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  28564816 atcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttttaaaaaagtaaaatataattaatgatggtgggacc 28564915  T
Q  215 cactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccgcaa 314  Q
    |||| |||||||||||||||||||||||||||| |||||||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||    
T  28564916 cacttagtggtaggacccaccatctattttttgtgtctatctctctacaacttaaaaaactccatttattttgccaaatggagaggatcttcacccgcaa 28565015  T
Q  315 a 315  Q
    |    
T  28565016 a 28565016  T

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Target: chr2; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 116 - 307
Target Start/End: Original strand, 13238606 - 13238797
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  13238606 atcctctccatttatgcgtttctcaatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggaccc 13238705  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    |||  ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  13238706 acttggtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 13238797  T

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Target: chr2; HSP #4
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 108 - 310
Target Start/End: Complemental strand, 23259645 - 23259443
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||||||| ||  |||||||  |||||| |||||||||||||| ||| |||||||||| |||||||||| |||||||||||||||||||||||||||    
T  23259645 gggttagaatcatcttcatttatacgtttcttcatttcttcaattttgagggataaagacatataaaatcttaaaaaaagtaaaatataattaatgatgg 23259546  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || || ||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  23259545 tgggatccacttagtagtaggacccaccagctattttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagaggatcttca 23259446  T
Q  308 ccc 310  Q
    |||    
T  23259445 ccc 23259443  T

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Target: chr2; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 39465700 - 39465801
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39465700 atcctctccatttatgtgtttctccattttttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 39465799  T
Q  216 ac 217  Q
    ||    
T  39465800 ac 39465801  T

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Target: chr2; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 129 - 311
Target Start/End: Complemental strand, 45625199 - 45625034
Alignment:
Q  129 atgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtagg 228  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||| ||||||||||||||                 ||    
T  45625199 atgtgtttctccatttcttcaatttagagagataaagacacgtaaaatcttgaaaaatataaaataaaattaatgatggtg-----------------gg 45625117  T
Q  229 acccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    |||||| || ||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  45625116 acccacaatttatttcttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcacccg 45625034  T

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Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 41983498 - 41983401
Alignment:
Q  107 ggggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgat 205  Q
    |||||||  |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41983498 ggggttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacat-aaatcttgaaaaaagtaaaatataattaatgat 41983401  T

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Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 155 - 311
Target Start/End: Original strand, 11864841 - 11864989
Alignment:
Q  155 gagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctat 254  Q
    |||||| ||||| | ||||||||||| |||||||||||||||||  ||||||||||||| || | |||||||        ||||||||||||| ||||||    
T  11864841 gagagacaaagataaataaaatcttggaaaaagtaaaatataatccatgatggtgagactcatttagtggta--------catctattttttgtgtctat 11864932  T
Q  255 ctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    |||||||||||||| |||||||||||||||||   ||||||||||||||||||||||    
T  11864933 ctctctccaacttgtaaaactccatttattttgataaatggagaggatcttcacccg 11864989  T

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Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 374581 - 374499
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgat 205  Q
    |||||||||||||||||| ||||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  374581 ccatttatgtgtttctccctttctttcatttagagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgat 374499  T

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Target: chr2; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 181 - 310
Target Start/End: Original strand, 2063343 - 2063472
Alignment:
Q  181 aaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggaccca-ccatctattttttgggtctatctctctccaacttgcaaaactccat 279  Q
    ||||||||| ||||| |||||||||||||  |||||||  ||||||||||| | |||||||||||||| |||||||||||||||| |||| |||||| ||    
T  2063343 aaaaaagtataatattattaatgatggtggaacccacttggtggtaggaccaaaccatctattttttgtgtctatctctctccaaattgc-aaactctat 2063441  T
Q  280 ttattttaccaaatggagaggatcttcaccc 310  Q
    |||||||  |||||| |||||||||| ||||    
T  2063442 ttattttgtcaaatgaagaggatcttaaccc 2063472  T

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Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 182 - 302
Target Start/End: Complemental strand, 4446980 - 4446860
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccattt 281  Q
    ||||||||||| |||||||||||| |||| ||||| | |||||||||| |||| ||||||||| || |||||||||||| ||| ||| | |  |||||||    
T  4446980 aaaaagtaaaaaataattaatgatagtgaaacccaattagtggtaggatccactatctattttatgtgtctatctctcttcaaattgtacacttccattt 4446881  T
Q  282 attttaccaaatggagaggat 302  Q
    |||||| ||||||||||||||    
T  4446880 attttatcaaatggagaggat 4446860  T

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Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 134 - 271
Target Start/End: Original strand, 374946 - 375073
Alignment:
Q  134 tttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggaccca 233  Q
    ||||||||||| ||| |||| |||||||||||||||||||||          ||||||| |||||||||||||||| |||||||| |||  |||||||||    
T  374946 tttctccatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggacccacttagtaataggaccca 375035  T
Q  234 ccatctattttttgggtctatctctctccaacttgcaa 271  Q
    |||  ||||||||| |||||||||||||||| ||||||    
T  375036 ccacttattttttgtgtctatctctctccaaattgcaa 375073  T

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Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 107 - 209
Target Start/End: Original strand, 10877618 - 10877721
Alignment:
Q  107 ggggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatct--tgaaaaaagtaaaatataattaatga 204  Q
    |||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    |||||| | |||||||||||||||    
T  10877618 ggggttaggatcctcttcatttatgtgtttctccatttcttcaatttggagagataaa-acacataaaatttaaaaaaaaaaatgaaatataattaatga 10877716  T
Q  205 tggtg 209  Q
    |||||    
T  10877717 tggtg 10877721  T

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Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 2061302 - 2061382
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatata 196  Q
    |||||| ||||||||  || |||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  2061302 atcctctccatttattagtatctcaatttcttccatttggagagataaagacgcataaaatcttgaaaaaagtaaaatata 2061382  T

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Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 310
Target Start/End: Original strand, 38397015 - 38397199
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagt 222  Q
    |||||||| | | |||||||||| |||||||||||||||| ||||| | ||||| ||| ||||| |||||  |||||| |||||||| ||| |||| | |    
T  38397015 ccatttatttttctctccatttcatcaatttggagagatatagacaaaaaaaat-ttg-aaaaactaaaaagtaattattgatggtgggactcacttaat 38397112  T
Q  223 ggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
     |||| |||||| ||||||||| |  |||||||||||| ||| |||| | ||||| |||||| ||| |||||||||||||||| ||||    
T  38397113 agtagcacccactatctattttatttgtctatctctcttcaaattgc-atactccgtttattatacaaaatggagaggatctttaccc 38397199  T

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Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 12949402 - 12949482
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatga 204  Q
    |||| ||||| ||||||| ||||| | ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  12949402 ccatctatgtctttctccgtttctcctatttggagagataaagatacataaaatcttgaaaaaagtaaaa-ataattaatga 12949482  T

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Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 21454582 - 21454475
Alignment:
Q  178 ttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactcc 277  Q
    ||||||||||||||| ||||||||||||||||  ||||||| | ||||| ||||||| ||||| |||||| ||||||||||||| || || | |||||||    
T  21454582 ttgaaaaaagtaaaaaataattaatgatggtggaacccacttaatggtatgacccacaatcta-tttttgtgtctatctctctctaaattac-aaactcc 21454485  T
Q  278 atttatttta 287  Q
    ||||||||||    
T  21454484 atttatttta 21454475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 23459930 - 23459841
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| |||||||||||||||| |||||| | |||| |||||||| |||  ||||||||| |||||||||||||||| ||||||    
T  23459930 aaaaagtaaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattgcaa 23459841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 40640706 - 40640783
Alignment:
Q  228 gacccaccatctatt-ttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatct 304  Q
    ||||||||||||||| |||||  | ||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  40640706 gacccaccatctattcttttgtatatatctctctccaaattgcaaaactccatttattttaacaaatggagaggatct 40640783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 30709100 - 30709183
Alignment:
Q  181 aaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaa 264  Q
    |||||||||||| | |||||||||||||| || ||||| ||||||||||||||  ||||||||| || ||||||||||||||||    
T  30709100 aaaaaagtaaaaaacaattaatgatggtgggatccacttagtggtaggacccaatatctattttatgtgtctatctctctccaa 30709183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 310
Target Start/End: Original strand, 19908729 - 19908897
Alignment:
Q  140 catttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatct 239  Q
    |||||| || |||| |||||||| ||| ||| ||||  || |||| | ||||| |||||||||||||||| |||||||| |   ||||||| ||| ||||    
T  19908729 catttcatccatttagagagatatagatacacaaaaatttcaaaacactaaaaaataattaatgatggtgggacccacttaaaagtaggactcactatct 19908828  T
Q  240 attttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||||| || ||||||||| |||||| |||| | |||||||||||| || |||||| |||||||||| ||||    
T  19908829 attttatgtgtctatctc-ctccaaattgc-atactccatttattatatcaaatgaagaggatctttaccc 19908897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 116 - 271
Target Start/End: Original strand, 8988791 - 8988935
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| ||||||||   ||||||||||| ||| |||| |||||||||||||||||||||            ||||| |||||||||||||||| |||||    
T  8988791 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaaa-----------taaaaaataattaatgatggtgggaccc 8988879  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||| |||| ||||||| | ||  ||||||||| |||||||||||||||| ||||||    
T  8988880 acttagtgataggacctatcacttattttttgtgtctatctctctccaaattgcaa 8988935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 271
Target Start/End: Original strand, 29188588 - 29188734
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| ||||||||   ||||||||||| ||| |||| |||||||||||||||||||||          ||||||| |||||||||||||||| |||||    
T  29188588 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggaccc 29188677  T
Q  216 actcagtggtaggacccacca-tctattttttgggtctatctctctccaacttgcaa 271  Q
     || |||| |||||| ||||| |   ||||||| |||||||||||||||| ||||||    
T  29188678 gcttagtgataggacgcaccacttgtttttttgtgtctatctctctccaaattgcaa 29188734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 38824061 - 38824146
Alignment:
Q  227 ggacccaccatctatt-ttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    ||||||||||| |||| ||||  |||||||||||||||| || ||||||||||||||||||| ||||| |||| |||||| |||||    
T  38824061 ggacccaccatttattcttttttgtctatctctctccaaattacaaaactccatttattttagcaaatagagatgatcttaacccg 38824146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 36929706 - 36929823
Alignment:
Q  181 aaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatt 280  Q
    ||||||||||||  ||||||||||||| |  | ||| | | ||||||||| ||| | ||||||| || |||||||||||||||| |||| | ||||||||    
T  36929706 aaaaaagtaaaaagtaattaatgatggcggaatccatttaatggtaggacacactacctattttatgtgtctatctctctccaaattgc-atactccatt 36929804  T
Q  281 tattttaccaaatggagag 299  Q
    |||||| | ||||||||||    
T  36929805 tattttgctaaatggagag 36929823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 310
Target Start/End: Complemental strand, 36758945 - 36758818
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccattt 281  Q
    ||||||||||| |||||||||||| |||  ||||||  |  | ||||| ||||||  || |||||| |||||||||||||||| |||| ||  |||||||    
T  36758945 aaaaagtaaaaaataattaatgattgtggaacccacctaaagataggatccaccacttactttttgtgtctatctctctccaaattgc-aacttccattt 36758847  T
Q  282 attttaccaaatggagaggatcttcaccc 310  Q
    |||||   |||||||||||||||| ||||    
T  36758846 atttttataaatggagaggatctttaccc 36758818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 34512140 - 34512027
Alignment:
Q  150 atttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttggg 249  Q
    ||||||||||||| ||| ||| | ||| ||| ||||||||||| | |||||||||| |||||||| ||| | | |||  |||||| ||||||||| || |    
T  34512140 atttggagagatatagatacaaataat-ttggaaaaagtaaaaaacaattaatgattgtgagacctacttaatagtataacccactatctattttatgtg 34512042  T
Q  250 tctatctctctccaa 264  Q
    ||||||| |||||||    
T  34512041 tctatctttctccaa 34512027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 42075506 - 42075456
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataa 173  Q
    ||||||||  |||| ||||||||||| ||||||||||||||||||||||||    
T  42075506 ccatttattagtttatccatttcttccatttggagagataaagacacataa 42075456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 13780506 - 13780579
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatcta-ttttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| || ||||| |||| ||||||||||||  || ||||||| |||||||||||||||| ||||||    
T  13780506 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 13780579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 311
Target Start/End: Original strand, 35315493 - 35315621
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccattt 281  Q
    ||||||||||| ||| |||| |||||   ||| |||| | || |||||||||||| ||||| |||| || ||||||||||||| |||||    |||||||    
T  35315493 aaaaagtaaaaaatagttaacgatggaaggactcacttaatgataggacccaccacctattgtttgtgtttatctctctccaaattgcatct-tccattt 35315591  T
Q  282 attttaccaaatggagaggatcttcacccg 311  Q
    |||||   |||||||||||||||| |||||    
T  35315592 atttttataaatggagaggatcttaacccg 35315621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 30840872 - 30840935
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctatttttt 246  Q
    ||||||||||| ||||||||| |||||||||| |||| |||| ||||||||||||  ||||||||    
T  30840872 aaaaagtaaaaaataattaat-atggtgagactcacttagtgataggacccaccacttatttttt 30840935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 157359 - 157417
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaa 175  Q
    ||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||| ||||||||    
T  157359 atcctccccctttatgtctttctccatttgttctatttggagagaaaaaga-acataaaa 157417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 34887793 - 34887746
Alignment:
Q  263 aacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||||||||||| |||||||||||||| |||| |||||||| |||||||    
T  34887793 aacttgcaaaattccatttattttactaaatagagaggattttcaccc 34887746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 19905920 - 19905981
Alignment:
Q  230 cccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaa 292  Q
    ||||||||||||||| || ||||||||||||| || |||| | |||||||||||| |||||||    
T  19905920 cccaccatctattttatgtgtctatctctctcaaaattgc-atactccatttattataccaaa 19905981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 303
Target Start/End: Complemental strand, 30857763 - 30857642
Alignment:
Q  181 aaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatt 280  Q
    |||||| || || |||||||||||||||| || ||| | | | |||||| |||  |||||||||||| ||||| |||||| ||| || | | ||||||||    
T  30857763 aaaaaaatataaaataattaatgatggtgtgatccatttaatagtaggatccattatctattttttgtgtctacctctcttcaaattac-atactccatt 30857665  T
Q  281 tattttaccaaatggagaggatc 303  Q
    ||||||   ||||||||||||||    
T  30857664 tattttgtgaaatggagaggatc 30857642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 3354885 - 3354844
Alignment:
Q  134 tttctccatttcttcaatttggagagataaagacacataaaa 175  Q
    ||||||||||| ||| |||| |||||||||||||||||||||    
T  3354885 tttctccatttgttctatttagagagataaagacacataaaa 3354844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 30824122 - 30824171
Alignment:
Q  135 ttctccatttcttcaatttggagagataaagacacataaaatcttgaaaa 184  Q
    |||||||||||||| |||| |||||||| ||||||| |||||||| ||||    
T  30824122 ttctccatttcttccatttagagagatatagacacaaaaaatcttaaaaa 30824171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 32009971 - 32009934
Alignment:
Q  270 aaaactccatttattttaccaaatggagaggatcttca 307  Q
    |||||||||||||||||  |||||||||||||||||||    
T  32009971 aaaactccatttattttgtcaaatggagaggatcttca 32009934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 40254217 - 40254144
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatctatt-ttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| || ||||| |||| ||||||||||||  |||| ||||| ||||||||||| |||| ||||||    
T  40254217 taatgatggtgggatccacttagtgataggacccaccacttattattttgtgtctatctctccccaaattgcaa 40254144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 41073070 - 41073021
Alignment:
Q  135 ttctccatttcttcaatttggagagataaagacacataaaatcttgaaaa 184  Q
    |||||||||||||  |||| |||||||||||||||| |||||||| ||||    
T  41073070 ttctccatttctttcatttagagagataaagacacaaaaaatcttaaaaa 41073021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 6204587 - 6204535
Alignment:
Q  2 ttttatatttgccacatgtccaatatctatgaagtgaaatggtatacatggag 54  Q
    |||||||||||||||||||  || |||| ||||||||| ||||||| ||||||    
T  6204587 ttttatatttgccacatgttaaacatctgtgaagtgaattggtataaatggag 6204535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 167; Significance: 3e-89; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 108 - 310
Target Start/End: Original strand, 207980 - 208182
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  207980 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatga 208079  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  208080 tgggacccacttagtggtaggacccaccatctattttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 208179  T
Q  308 ccc 310  Q
    |||    
T  208180 ccc 208182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 3e-89; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 108 - 310
Target Start/End: Complemental strand, 30426827 - 30426625
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30426827 gggttaggatcctctccatttatgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 30426728  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||    
T  30426727 tgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagagggtcttca 30426628  T
Q  308 ccc 310  Q
    |||    
T  30426627 ccc 30426625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 108 - 311
Target Start/End: Original strand, 36991273 - 36991476
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  36991273 gggttaggatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacgtaaaatcttgaaaaaagtcaaatataattaatgatgg 36991372  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||||| |||||||||||||| ||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36991373 tgggacccacttagtggtaggacccatcatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 36991472  T
Q  308 cccg 311  Q
    ||||    
T  36991473 cccg 36991476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 116 - 310
Target Start/End: Original strand, 28069644 - 28069838
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  28069644 atcctctccatttatgtgtttttcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggaccc 28069743  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  28069744 acttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 28069838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 109 - 310
Target Start/End: Complemental strand, 40695404 - 40695204
Alignment:
Q  109 ggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggt 208  Q
    |||||| |||||||| |||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  40695404 ggttaggatcctccctatttatgtatttatccatttcttcaatttggagggataaagaaacataaaatcttgaaaaaagtaaaatataactaatgatggt 40695305  T
Q  209 gagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcac 308  Q
    |  || |||| |||||||||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||||||| | ||||||||| |||||||||    
T  40695304 ggaactcacttagtggtaggacctaccatctattttttgtgtctatctctctccaactt-ccaaactccatttattttgctaaatggagaagatcttcac 40695206  T
Q  309 cc 310  Q
    ||    
T  40695205 cc 40695204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 116 - 310
Target Start/End: Complemental strand, 10652768 - 10652573
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaa-gtaaaa-tataattaatgatggtgagac 213  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||||| |||    
T  10652768 atcctctccatttatgtgtttcttcatttcttcaatttggagagataaa-acacataaaattttgaaaaaaagtaaaaatataattaatgatggtgggac 10652670  T
Q  214 ccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||| | ||| ||| ||||||||||| ||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10652669 ccaattagtagtatgacccaccatcaattttttgtatctatctctctccaacttgcaaaacaccatttattttaccaaatggagaggatcttcaccc 10652573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 108 - 286
Target Start/End: Original strand, 41511179 - 41511357
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41511179 gggttaggatcctctccatttatgtgtttttccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatgg 41511278  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttatttt 286  Q
    ||  | ||||| |||| |||||||||| |||||||||||   ||||||||| |||||||||||||||||||||||||||    
T  41511279 tggaaaccacttagtgataggacccactatctattttttatatctatctctttccaacttgcaaaactccatttatttt 41511357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 108 - 310
Target Start/End: Complemental strand, 10672670 - 10672470
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| ||||||  ||||||||||||||| ||||| ||||||||||||||||||| | ||||||||| || ||||  |||||||||||||||||||||    
T  10672670 gggttagtatcctcttcatttatgtgtttcttcatttattcaatttggagagataaaaatacataaaattttaaaaagggtaaaatataattaatgatgg 10672571  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || ||| |||| |||||||||| ||||||||||||||||| |||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  10672570 tgggactcacttagtggtaggatccaccatctattttttgtgtctatc--tctccaacttgcaaaactccatttattttgccaaatggagagaatcttca 10672473  T
Q  308 ccc 310  Q
    |||    
T  10672472 ccc 10672470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 123 - 308
Target Start/End: Complemental strand, 28319045 - 28318854
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagt 222  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||  |||||||| |||    
T  28319045 ccatttacgtgtttctccatttcttcaatttggagagacaaagacacataaaattttaaaaaaagtaaaatataattaatgatggttggacccacttagt 28318946  T
Q  223 ggtaggacccaccatc------tattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcac 308  Q
    |||||||||||| |||      ||||||||  || |||||||||| |||||||||||||||||||||||||||||||  ||| |||||||||    
T  28318945 ggtaggacccactatctttttttattttttttgtatatctctctcaaacttgcaaaactccatttattttaccaaataaagaagatcttcac 28318854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 123 - 307
Target Start/End: Complemental strand, 44859310 - 44859128
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagt 222  Q
    ||||||| |||||| ||| |||||| ||||||||||||||||||||| | |||| ||  ||||| |||||||||||||||||||||| |||||||| |||    
T  44859310 ccatttacgtgtttttccttttctttaatttggagagataaagacacgtgaaattttttaaaaaataaaatataattaatgatggtgggacccacttagt 44859211  T
Q  223 ggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    ||||| |||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||    
T  44859210 ggtagaacccaccatctattttt--agtctatctctctctaacttgcaaaactccatttattttgtcaaatagagaggatcttca 44859128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 115 - 310
Target Start/End: Original strand, 45113194 - 45113390
Alignment:
Q  115 aatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacc 214  Q
    ||||||| |||||||| |  |||| ||||| | | ||||||||||||| ||||||||||||| ||||||||| ||||| ||||||||||||| || |||     
T  45113194 aatcctctccatttatatccttcttcatttttaccatttggagagatatagacacataaaattttgaaaaaaataaaaaataattaatgatgatgggaca 45113293  T
Q  215 cactcagtggtaggacccaccatctatt-ttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||| |||||| |||||||||||||||| ||||| |||||| ||||||||| ||||||||| | |||||||||| ||||||||||||||||| ||||    
T  45113294 cacttagtggttggacccaccatctattcttttgtgtctatgtctctccaaattgcaaaacacaatttattttagcaaatggagaggatcttaaccc 45113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 116 - 274
Target Start/End: Original strand, 24101941 - 24102099
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| |||||||||||||| || |||| || ||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||  || |    
T  24101941 atcctctccatttatgtgtttttctatttttttaatttggagagataaagacacgtaaaatcttgaaaaaaatgaaatataattaatgatggtggaactc 24102040  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaac 274  Q
    ||| |||||||||| ||||||||||||||||  ||||||||||||  ||||||||||||    
T  24102041 acttagtggtaggatccaccatctattttttatgtctatctctcttaaacttgcaaaac 24102099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 125 - 310
Target Start/End: Complemental strand, 37966583 - 37966400
Alignment:
Q  125 atttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtgg 224  Q
    |||||||| ||||||||||||||  ||||||||||||||||| ||||||||  || ||||||||||||||||||||||| |  || |   || | |||||    
T  37966583 atttatgtctttctccatttcttttatttggagagataaagatacataaaaatttaaaaaaagtaaaatataattaatggtattg-ggttcaattagtgg 37966485  T
Q  225 taggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||||||| || |||||||||||| || ||||||||| ||| |||| ||| |||||||||||| |||||||||||||||||| ||||    
T  37966484 taggacctacaatctattttttgtgtttatctctcttcaaattgc-aaattccatttattttgccaaatggagaggatcttaaccc 37966400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 8412178 - 8412294
Alignment:
Q  115 aatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacc 214  Q
    ||||||| |||||||||| ||||| ||||| ||| |||| |||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||| |    
T  8412178 aatcctctccatttatgtttttcttcattttttccatttagagagataaatacacataaaatattgaaaaaagtaaaatataattaacgatggtgagatc 8412277  T
Q  215 cactcagtggtaggacc 231  Q
     ||| ||||||||||||    
T  8412278 tacttagtggtaggacc 8412294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 124 - 305
Target Start/End: Original strand, 6014127 - 6014309
Alignment:
Q  124 catttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtg 223  Q
    |||||||||  ||||  |||||| | |||||||||| || ||||||| ||| | || |||||||||||| ||||||||||||  |  || ||||| | ||    
T  6014127 catttatgtccttctttatttctaccatttggagaggtatagacacacaaagttttcaaaaaagtaaaacataattaatgataataggatccacttaatg 6014226  T
Q  224 gtaggacccaccatctatt-ttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatctt 305  Q
    |||||||| | |||||||| ||||| |||||||| ||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  6014227 gtaggacctatcatctattcttttgtgtctatctttctccaaattgcaaaactctatttattttagcaaatggagaggatctt 6014309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 12177722 - 12177621
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| | |||||||||||||||||||||||||||||  |||||||| ||||  |||||||||||||||| |||||||||| |||||||||    
T  12177722 gggttaggatcctctctatttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgatgg 12177623  T
Q  208 tg 209  Q
    ||    
T  12177622 tg 12177621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 12422150 - 12422049
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| | |||||||||||||||||||||||||||||  |||||||| ||||  |||||||||||||||| |||||||||| |||||||||    
T  12422150 gggttaggatcctctctatttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgatgg 12422051  T
Q  208 tg 209  Q
    ||    
T  12422050 tg 12422049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 123 - 244
Target Start/End: Complemental strand, 27490149 - 27490028
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagt 222  Q
    |||||||||| |||||| |||||||| ||||| ||||| ||| | ||||||||||||||||||||||||||||||||||||||  | |||| |||| |||    
T  27490149 ccatttatgtctttctcaatttcttccatttgaagagacaaaaatacataaaatcttgaaaaaagtaaaatataattaatgatatttagactcacttagt 27490050  T
Q  223 ggtaggacccaccatctatttt 244  Q
    | ||||| |||| || ||||||    
T  27490049 gataggatccacaatttatttt 27490028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 249 - 310
Target Start/End: Original strand, 5033310 - 5033371
Alignment:
Q  249 gtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  5033310 gtctatctctctccaacttgcaaaactccatttattttgccaaatggaaaggatcttcaccc 5033371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 26749632 - 26749543
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| |||||||||||||||| |||||||| |||| ||||||||| ||  ||||||||| |||||||||||||||| ||||||    
T  26749632 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattgcaa 26749543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 5033031 - 5033091
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaat 176  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5033031 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaat 5033091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 287
Target Start/End: Original strand, 42761660 - 42761809
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    ||||||||||||||||| ||||||||| |||| || ||||  ||| ||||| ||||| ||||||||||||| ||  ||||||| |||||||||| ||||     
T  42761660 tctccatttcttcaatt-ggagagatatagactcaaaaaaa-ttggaaaaattaaaaaataattaatgatgatggaacccactgagtggtaggatccact 42761757  T
Q  236 atctattttttgggtctatctctctccaacttgcaaaactccatttatttta 287  Q
    ||||||||| || |||||||||||| ||| ||||  |  |||||||||||||    
T  42761758 atctattttatgtgtctatctctcttcaaattgcgtacttccatttatttta 42761809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 34612562 - 34612634
Alignment:
Q  189 aaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctc 261  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||  ||||||||| |||||||||||||    
T  34612562 aaaaaataattaatgatggtgagacccacttagtgataggacccaccacttattttttgtgtctatctctctc 34612634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 1937239 - 1937149
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacca-tctattttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| |||||||||||||||| ||||| || |||| |||||||||||| |   ||||||| |||||||||||||||| ||||||    
T  1937239 aaaaagtaaaaaataattaatgatggtgggacccgcttagtgataggacccaccacttgtttttttgtgtctatctctctccaaattgcaa 1937149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 264
Target Start/End: Complemental strand, 36748611 - 36748494
Alignment:
Q  142 tttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctat 241  Q
    ||||||| ||||||||||||||||||||| | || |||||||||  ||||  |||||||||||||||| || ||||| | ||||||||||| |  ||||     
T  36748611 tttcttccatttggagagataaagacacagagaagcttgaaaaa--taaa--ataattaatgatggtgggatccacttaatggtaggacccgctgtcta- 36748517  T
Q  242 tttttgggtctatctctctccaa 264  Q
    |||||| |||||||| |||||||    
T  36748516 tttttgtgtctatctatctccaa 36748494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 12177616 - 12177572
Alignment:
Q  231 ccaccatctattttttgggtctatctctctccaacttgcaaaact 275  Q
    |||||||||||||||||  ||||||||||||||||||||||||||    
T  12177616 ccaccatctattttttgtatctatctctctccaacttgcaaaact 12177572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 12422044 - 12422000
Alignment:
Q  231 ccaccatctattttttgggtctatctctctccaacttgcaaaact 275  Q
    |||||||||||||||||  ||||||||||||||||||||||||||    
T  12422044 ccaccatctattttttgtatctatctctctccaacttgcaaaact 12422000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 30796269 - 30796344
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctct 258  Q
    ||||||||||| |||||||||||||||| |||||||| |||| || ||||| |||| ||||||| | ||||||||||    
T  30796269 aaaaagtaaaaaataattaatgatggtgggacccacttagtgata-gacccgccatttatttttagcgtctatctct 30796344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 5033108 - 5033150
Alignment:
Q  215 cactcagtggtaggacccaccatctattttttgggtctatctc 257  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  5033108 cacttagtggtaggacccaccatctattttttgtgtctatctc 5033150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 6399914 - 6399991
Alignment:
Q  181 aaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctct 258  Q
    |||||||||||| ||||||||||||  || || |||||  ||  || |||||||||||||||||||| ||||||||||    
T  6399914 aaaaaagtaaaaaataattaatgataatgggatccacttggtaataagacccaccatctattttttgtgtctatctct 6399991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 17867727 - 17867654
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatcta-ttttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| || ||||| |||| ||||||||||||  || ||||||| |||||||||||||||| ||||||    
T  17867727 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 17867654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 21492730 - 21492777
Alignment:
Q  138 tccatttcttcaatttggagagataaagacaca-taaaatcttgaaaa 184  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||    
T  21492730 tccatttcttccatttggagagataaagacacacaaaaatcttgaaaa 21492777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 3763606 - 3763518
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgca 270  Q
    |||||||||||   ||||||||| ||||  ||||||| | ||||||||||||||| || ||||||  ||||| | |||||||| |||||    
T  3763606 aaaaagtaaaaagcaattaatgacggtggaacccacttaatggtaggacccaccaccttttttttttgtctaccactctccaaattgca 3763518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 24241566 - 24241602
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccact 218  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  24241566 aaaaagtaaaaaataattaatgatggtgaaacccact 24241602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 7e-87; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 108 - 310
Target Start/End: Original strand, 21151069 - 21151271
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21151069 gggttaggattctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 21151168  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||||| |||||||||| || |||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21151169 tgggacccacttagtggtaggatcctccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 21151268  T
Q  308 ccc 310  Q
    |||    
T  21151269 ccc 21151271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 123 - 310
Target Start/End: Complemental strand, 9559197 - 9559010
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagt 222  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||    
T  9559197 ccatttatatgtttctcgatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggacccacttagt 9559098  T
Q  223 ggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  9559097 ggtaggacccaccatctattttttgtatctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 9559010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 123 - 315
Target Start/End: Original strand, 16366450 - 16366642
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagt 222  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||| |||| |||    
T  16366450 ccatttatgtgtttctccatttcttcaatttggagagataaaaacacgtaaaatcttgaaaaaagtaaaatataattaatgatggtgggacacacttagt 16366549  T
Q  223 ggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccgcaaa 315  Q
    ||||||| ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  16366550 ggtaggatccaccatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccccaaa 16366642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 125 - 309
Target Start/End: Complemental strand, 45260568 - 45260384
Alignment:
Q  125 atttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtgg 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||| |||||    
T  45260568 atttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatgggatccacttagtgg 45260469  T
Q  225 taggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacc 309  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  45260468 taggatccacaatctattttttgtgtctatctctctccaacttgcaaaactcaatttattttgccaaatggagaggatcttcacc 45260384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 123 - 310
Target Start/End: Original strand, 7362500 - 7362686
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagt 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| | |||    
T  7362500 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaacccatttagt 7362599  T
Q  223 ggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||  |||||||||| |||||||||||    
T  7362600 ggtacgacccaccatctattttttgtgtctatctctctccaatttgcaaaactccatttattttgtcaaatggaga-gatcttcaccc 7362686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 108 - 310
Target Start/End: Original strand, 12139245 - 12139446
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||    
T  12139245 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaa--cacataaaatcttaaaaaaagtaaaatataattaatgatgg 12139342  T
Q  208 tgagaccc-actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttc 306  Q
    || ||||| ||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||| |||| ||||||    
T  12139343 tgggaccccacttaatggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacttcatttattttgccaaatgaagagaatcttc 12139442  T
Q  307 accc 310  Q
    ||||    
T  12139443 accc 12139446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 116 - 310
Target Start/End: Original strand, 44647890 - 44648083
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtg--agac 213  Q
    |||||| ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||| |  ||||    
T  44647890 atcctctccatttatgtgtttctccatttcttcaatttg---agataaagacacataaaatcttgaaaaatgtaaaatataattaatgatggagggagac 44647986  T
Q  214 ccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  44647987 ccacttagtggtcggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 44648083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 124 - 310
Target Start/End: Original strand, 4888400 - 4888586
Alignment:
Q  124 catttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtg 223  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||| |||| ||| ||||    
T  4888400 catttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttaaaaaacataaaatataattaatgatggtgggacctacttagtg 4888499  T
Q  224 gtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  4888500 gtaggacccactatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgtcaaatggagaggatcttcaccc 4888586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 116 - 310
Target Start/End: Original strand, 18198181 - 18198375
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||||||||||||||||| ||| |    
T  18198181 atcctctccatttatgtgtttctccatttcttcaatttgtagagataaaatcacataaaatcttgaaaaaaataaaatataattaatgatggtgggactc 18198280  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||| ||||| || ||||||||||||||||||| |||||| | ||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  18198281 acttagtggcagaacccaccatctattttttgtgtctatttatctccaatttgcaaaactccatttattttgccaaatggagaggatcttcaccc 18198375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 110 - 307
Target Start/End: Complemental strand, 47226229 - 47226035
Alignment:
Q  110 gttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtg 209  Q
    ||||| |||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  47226229 gttaggatcctctccatttatgtgtttctctatttcttcaatttggagagataaa-acacataaaatcttggaaaaagtaaaatataattaatgatggtg 47226131  T
Q  210 agacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
     |||||| | |||||| |||||||||||  |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47226130 ggacccatttagtggtgggacccaccat--attttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 47226035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 116 - 302
Target Start/End: Complemental strand, 25084878 - 25084690
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| |||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||    
T  25084878 atcctctccatttatgtgtttctccatttttttaatttgaagagataaagacacataaaattttgaaaaaaataaaatataattaatgatggtgggaccc 25084779  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactcca--tttattttaccaaatggagaggat 302  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||  |  ||| |||| |||||||||||||||    
T  25084778 acttagtggtaggacccaccatctattttttgtgtctatctctctccaacttacaaaactttatttttttttttccaaatggagaggat 25084690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 115 - 310
Target Start/End: Original strand, 33450430 - 33450626
Alignment:
Q  115 aatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacc 214  Q
    |||||||  |||||||||  |||||||||||| | ||||||||||||| | ||||| ||||| ||||||||| ||||| ||||||||||||| || ||||    
T  33450430 aatcctcttcatttatgtccttctccatttctaccatttggagagatataaacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggacc 33450529  T
Q  215 cactcagtggtaggacccaccatctatt-ttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||| |||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||| ||||    
T  33450530 cacttagtggttggacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatcttaaccc 33450626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 115 - 310
Target Start/End: Complemental strand, 47500434 - 47500238
Alignment:
Q  115 aatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacc 214  Q
    ||||||| ||||||||||  |||||||||||| | |||| |||||||| ||||||| ||||| ||||||||| ||||| ||||||||||||| || ||||    
T  47500434 aatcctctccatttatgtccttctccatttctaccatttagagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggacc 47500335  T
Q  215 cactcagtggtaggacccaccatctatt-ttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||| |||||| |||||||||||||||| ||||| |||||||||||||||| || |||||||| ||||||||||  |||||||||||||||| ||||    
T  47500334 cacttagtggttggacccaccatctattcttttgtgtctatctctctccaaattacaaaactcaatttattttagtaaatggagaggatcttaaccc 47500238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 116 - 302
Target Start/End: Original strand, 29630973 - 29631156
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| ||||| |||| ||||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||||  |||||||||||| ||| ||||     
T  29630973 atcctctccattcatgtctttctccatttctttcatttggagatataaagacacataaaattttgaaaaaagtaaagaataattaatgatagtgggacct 29631072  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggat 302  Q
    ||  |||||| |||||||| |||||| ||||| |||||  ||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  29631073 acatagtggttggacccactatctatgttttgtgtcta--tctcttcaaattgc-aaactccatttattttaccaaatggagaggat 29631156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 115 - 311
Target Start/End: Complemental strand, 34986096 - 34985900
Alignment:
Q  115 aatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaag-taaaatataattaatgatggtgagac 213  Q
    ||||||| |||||||||| ||||||||||||| | ||||||||||||| |||||  |||||| |||||||||  ||||| ||||||||||||| || |||    
T  34986096 aatcctctccatttatgtctttctccatttctaccatttggagagatatagaca--taaaattttgaaaaaaaataaaaaataattaatgatgatgggac 34985999  T
Q  214 ccactcagtggtaggacccaccatctatt-ttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
     || | ||||||  ||||||||||||||| ||||| |||||||||||||||| ||||||||||| |||||||||| ||||| |||||||| || |||||    
T  34985998 tcatttagtggtttgacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaattgagaggattttaacccg 34985900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 116 - 292
Target Start/End: Original strand, 32915884 - 32916056
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||||||||| ||||  || |||||   ||||||||||| ||||||||| ||| |    
T  32915884 atcctccccatttatgttcttctccatttcttccatttggagagataaagacacaaaaaagttttaaaaa---aaaatataattcatgatggtgggactc 32915980  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaa 292  Q
    ||| | ||||||||||||| || ||||||||| |||||||||||| ||| |||| |  |||||||||||||||||||    
T  32915981 acttaatggtaggacccactatttattttttgtgtctatctctcttcaaattgc-atcctccatttattttaccaaa 32916056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 166 - 310
Target Start/End: Complemental strand, 39855913 - 39855770
Alignment:
Q  166 acacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaac 265  Q
    |||| ||||||||||||||||||||||| |||||||||||| || |||||||| |||||||||||| ||||||| |||| || ||||||||||||||||     
T  39855913 acacttaaaatcttgaaaaaagtaaaatttaattaatgatgatgggacccacttagtggtaggaccgaccatcttttttatgtgtctatctctctccaaa 39855814  T
Q  266 ttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    || | |||||||||||| |||  |||||| |||| ||||| ||||    
T  39855813 ttac-aaactccatttaatttgtcaaatgaagagaatcttaaccc 39855770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 47799984 - 47799895
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| |||||||||||||||| |||||||| |||| ||||||||| ||  ||||||||| |||||||||||||||| ||||||    
T  47799984 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattgcaa 47799895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 989132 - 989239
Alignment:
Q  194 ataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaat 293  Q
    ||||||||| |||||  |||| ||| ||||||||||||||| || ||||||||| |||||||||||||||| |||| |||||||||||| |||  |||||    
T  989132 ataattaattatggttggacctacttagtggtaggacccactatatattttttgtgtctatctctctccaaattgc-aaactccatttaatttgtcaaat 989230  T
Q  294 ggagaggat 302  Q
    |||||||||    
T  989231 ggagaggat 989239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 124 - 298
Target Start/End: Complemental strand, 33609019 - 33608845
Alignment:
Q  124 catttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtg 223  Q
    ||||||||| | ||||||||||||| ||||||| ||||||||| ||| |   | || ||||||||| || ||||||||||||||||  || |||   ||     
T  33609019 catttatgtttctctccatttcttccatttggaaagataaagatacaaattttttttaaaaaagtataaaataattaatgatggtggaactcacctggta 33608920  T
Q  224 gtaggacccaccatctattttttgg-gtctatctctctccaacttgcaaaactccatttattttaccaaatggaga 298  Q
    |||| | |  ||||||||||||| | || ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  33608919 gtagtatcttccatctatttttttgtgtttatctctctccaaattgcaaa-ctccatttattttaccaaatggaga 33608845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 47271180 - 47271107
Alignment:
Q  233 accatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    |||||| |||||||| |||||||||||||||| ||||||| ||||||||||||| | ||||||||||||||||||    
T  47271180 accatcaattttttgtgtctatctctctccaaattgcaaa-ctccatttattttgctaaatggagaggatcttca 47271107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18947367 - 18947314
Alignment:
Q  1 gttttatatttgccacatgtccaatatctatgaagtgaaatggtatacatggag 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  18947367 gttttatatttgccacatgtccaacatctatgaagtgaaatggtataaatggag 18947314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 46802445 - 46802336
Alignment:
Q  150 atttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttggg 249  Q
    ||||||||||||||| |||||  |||  ||||| |||| | || |||||||| | ||||| |||||||| |||||||||||||||| ||||||||||  |    
T  46802445 atttggagagataaaaacaca--aaagtttgaagaaagcataaaataattaacggtggtgggacccacttagtggtaggacccaccgtctattttttatg 46802348  T
Q  250 tctatctctctc 261  Q
    ||||||||||||    
T  46802347 tctatctctctc 46802336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 30588526 - 30588615
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| |||||||||||||||| |||||||| |||| ||||||||  ||  ||||||||| ||||||||||  |||| ||||||    
T  30588526 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccgtcacttattttttgtgtctatctcttcccaaattgcaa 30588615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 40019626 - 40019699
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtg 209  Q
    |||| ||||| || ||||||||||||||| ||||| |||||||||||||||||| ||  |||||||||||||||    
T  40019626 tctcaatttcctccatttggagagataaaaacacaaaaaatcttgaaaaaagtataaagtaattaatgatggtg 40019699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 271
Target Start/End: Original strand, 47080374 - 47080509
Alignment:
Q  134 tttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggaccca 233  Q
    ||||||||||| ||| |||| |||||||| ||||||||||||  |  |||||| |||||   |||||||||||||| ||||| || |||| |||||||||    
T  47080374 tttctccatttgttctatttagagagatagagacacataaaaagtaaaaaaaaataaaa---aattaatgatggtgggacccgcttagtgataggaccca 47080470  T
Q  234 cca-tctattttttgggtctatctctctccaacttgcaa 271  Q
     || |   ||||||| |||||||||||||||| ||||||    
T  47080471 tcacttgtttttttgtgtctatctctctccaaattgcaa 47080509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 134 - 271
Target Start/End: Complemental strand, 19889156 - 19889029
Alignment:
Q  134 tttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggaccca 233  Q
    ||||||||||| ||| |||| |||||||||||||||||||||          ||||||| ||||||||||||||||  ||||||| |||| |||||||||    
T  19889156 tttctccatttattccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtggaacccacttagtgataggaccca 19889067  T
Q  234 ccatctattttttgggtctatctctctccaacttgcaa 271  Q
    | |  |||||||||  ||||||||| || || ||||||    
T  19889066 caacttattttttgtatctatctctttctaaattgcaa 19889029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 19027751 - 19027685
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatcta-ttttttgggtctatctctctccaa 264  Q
    ||||||||||| || ||||| |||| ||||||||||||| || ||||||| ||||||||||||||||    
T  19027751 taatgatggtgggatccacttagtgataggacccaccatttatttttttgtgtctatctctctccaa 19027685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 20726885 - 20726951
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatcta-ttttttgggtctatctctctccaa 264  Q
    ||||||||||| || ||||| |||| ||||||||||||| || ||||||| ||||||||||||||||    
T  20726885 taatgatggtgggatccacttagtgataggacccaccatttatttttttgtgtctatctctctccaa 20726951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 14696825 - 14696752
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatcta-ttttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| || ||||| |||| ||||||||||||  || ||||||| |||||||||||||||| ||||||    
T  14696825 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 14696752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 18948242 - 18948287
Alignment:
Q  2 ttttatatttgccacatgtccaatatctatgaagtgaaatggtata 47  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||    
T  18948242 ttttatatttgccacatgtcaaacatccatgaagtgaaatggtata 18948287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 30153305 - 30153240
Alignment:
Q  143 ttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggt 208  Q
    |||||| ||||||||||||||||||| | ||||  ||||||||| || || |||||||||||||||    
T  30153305 ttcttccatttggagagataaagacaaaaaaaaaattgaaaaaaatataaaataattaatgatggt 30153240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 110 - 258
Target Start/End: Original strand, 32916098 - 32916236
Alignment:
Q  110 gttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtg 209  Q
    |||||||||||| ||||||||   ||||||||||||||| |||| |||||||||| ||||| ||||          | ||||| ||||||||||||||||    
T  32916098 gttagaatcctctccatttataactttctccatttcttccattttgagagataaatacacacaaaa----------aataaaaaataattaatgatggtg 32916187  T
Q  210 agacccactcagtggtaggacccaccatctattttttgggtctatctct 258  Q
      | ||||| ||||||| ||||||| | |||||||| | || |||||||    
T  32916188 gaatccacttagtggtatgacccacaacctatttttcgtgtgtatctct 32916236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 6882190 - 6882149
Alignment:
Q  134 tttctccatttcttcaatttggagagataaagacacataaaa 175  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||    
T  6882190 tttctccatttgttccatttgaagagataaagacacataaaa 6882149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 30102501 - 30102574
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatcta-ttttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| || ||||| |||| ||||||||||||  || ||||||  |||||||||||||||| ||||||    
T  30102501 taatgatggtgggatccacttagtgataggacccaccacttatttttttttgtctatctctctccaaattgcaa 30102574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 35737128 - 35737193
Alignment:
Q  206 ggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    |||| |||||||  |||| | ||||||||||  ||||||||| |||||||||||||||| ||||||    
T  35737128 ggtgggacccacctagtgatgggacccaccacttattttttgtgtctatctctctccaaattgcaa 35737193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 29844320 - 29844364
Alignment:
Q  220 agtggtaggacccaccatctattttttgggtctatctctctccaa 264  Q
    |||||||| |||||| ||||||||| || ||||||||||||||||    
T  29844320 agtggtagaacccactatctattttatgtgtctatctctctccaa 29844364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 30588489 - 30588529
Alignment:
Q  135 ttctccatttcttcaatttggagagataaagacacataaaa 175  Q
    |||||||||| ||| |||| |||||||||||||||||||||    
T  30588489 ttctccatttgttccatttagagagataaagacacataaaa 30588529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 339
Target Start/End: Complemental strand, 35943032 - 35943004
Alignment:
Q  311 gcaaactcctagcttcttctttaaaaatt 339  Q
    |||||||||||||||||||||||||||||    
T  35943032 gcaaactcctagcttcttctttaaaaatt 35943004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 1e-85; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 106 - 310
Target Start/End: Original strand, 50484301 - 50484505
Alignment:
Q  106 gggggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgat 205  Q
    ||||||||  |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  50484301 gggggttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgac 50484400  T
Q  206 ggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatctt 305  Q
    |||| |||||||| |||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50484401 ggtgggacccacttagtggttgtacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatctt 50484500  T
Q  306 caccc 310  Q
    |||||    
T  50484501 caccc 50484505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 116 - 311
Target Start/End: Original strand, 12151692 - 12151887
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12151692 atcctccccatttatgtgtttctccatttattcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 12151791  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    ||| ||||||||||||||| |||||||||||| |||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||    
T  12151792 acttagtggtaggacccacaatctattttttgtgtctttctctctccaactggcaaaactccatttattttgccaaatggagaagatcttcacccg 12151887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 118 - 310
Target Start/End: Complemental strand, 50294211 - 50294019
Alignment:
Q  118 cctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccac 217  Q
    |||| ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  || ||||    
T  50294211 cctctccatttacgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtaggatccac 50294112  T
Q  218 tcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    | |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||    
T  50294111 ttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatgaagaggatcttcaccc 50294019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 108 - 310
Target Start/End: Complemental strand, 23862114 - 23861908
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaa-aaaagtaaaatataattaatgatg 206  Q
    ||||||||||||||  |||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  23862114 gggttagaatcctcttcattcatgtgtttctctatttcttcaatttggaaagataaagacacataaaatcttgaaaaaaaataaaatataattaatgatg 23862015  T
Q  207 gtgagacccactcagtggtagga---cccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatc 303  Q
    ||| || ||||| ||||||||||    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| | |||| ||||||||     
T  23862014 gtgggatccacttagtggtaggattcaccaccatctattttttgtgtctatctctctccaacttgcaaaacttcatttattttgctaaatagagaggata 23861915  T
Q  304 ttcaccc 310  Q
    |||||||    
T  23861914 ttcaccc 23861908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 107 - 310
Target Start/End: Complemental strand, 48327313 - 48327110
Alignment:
Q  107 ggggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaag-taaaatataattaatgat 205  Q
    |||||||  |||||| |||||||||||||| || |||||||| ||||||||| ||||||  |||||||||||||||||||  ||||||||||||||||||    
T  48327313 ggggttaagatcctctccatttatgtgtttatcaatttcttccatttggagatataaaggtacataaaatcttgaaaaaaaataaaatataattaatgat 48327214  T
Q  206 ggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatctt 305  Q
    |||| |||||||| ||||||||||| |||||||||||||||  |||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  48327213 ggtg-gacccacttagtggtaggactcaccatctattttttttgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatctt 48327115  T
Q  306 caccc 310  Q
    |||||    
T  48327114 caccc 48327110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 12381068 - 12380924
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12381068 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 12380969  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtct 252  Q
    || ||| |||| |||||||| ||||||||||||||||||| ||||    
T  12380968 tgggactcacttagtggtagaacccaccatctattttttgtgtct 12380924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 12385135 - 12384991
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12385135 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 12385036  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtct 252  Q
    || ||| |||| |||||||| ||||||||||||||||||| ||||    
T  12385035 tgggactcacttagtggtagaacccaccatctattttttgtgtct 12384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 106 - 310
Target Start/End: Original strand, 45977937 - 45978124
Alignment:
Q  106 gggggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgat 205  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  45977937 gggggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaacgat 45978036  T
Q  206 ggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatctt 305  Q
    | ||                 |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  45978037 gctg-----------------ggacccaccatctattttttgtatctatctctctccaacttgcaaaactccatttattttatcaaatagagaggatctt 45978119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 124 - 311
Target Start/End: Original strand, 40328209 - 40328395
Alignment:
Q  124 catttatgtgtttctccatttcttcaatttggagagataaa-gacacataaaatcttgaaaa-aagtaaaatataattaatgatggtgagacccactcag 221  Q
    ||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||  ||||||| ||    
T  40328209 catttatgtgtttcttcatttctttaatttggagagataaaagacacataaaatcttgaaaaaaagtaaaatataactaatgatggtggaacccacttag 40328308  T
Q  222 tggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    |||| |||||||||||||| |||||| |||||  ||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  40328309 tggtgggacccaccatcta-tttttgtgtcta--tctctccaatttgcaaaactccatttattttgccaaatggagaggatcttcgcccg 40328395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 115 - 311
Target Start/End: Complemental strand, 18976453 - 18976259
Alignment:
Q  115 aatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacc 214  Q
    ||||||| ||||||||||  |||| ||||||| | ||||||||||||| | |||||  |||| ||||||||| ||||| ||||||||||||| || ||||    
T  18976453 aatcctctccatttatgtccttcttcatttctaccatttggagagatataaacaca--aaattttgaaaaaaataaaa-ataattaatgatgatgggacc 18976357  T
Q  215 cactcagtggtaggacccaccatctatt-ttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
     ||| | |||| ||| |||||||||||| ||||| |||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||| |||||    
T  18976356 tacttaatggttggatccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatcttaacccg 18976259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 7841868 - 7841767
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| || ||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7841868 gggttaggattctctccatttatatgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 7841769  T
Q  208 tg 209  Q
    ||    
T  7841768 tg 7841767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 12380907 - 12380833
Alignment:
Q  236 atctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12380907 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 12380833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 12384974 - 12384900
Alignment:
Q  236 atctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12384974 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 12384900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 138 - 261
Target Start/End: Original strand, 24977187 - 24977310
Alignment:
Q  138 tccatttcttcaatttggagagataaagacacataaaatcttgaaaaaag-taaaatataattaatgatggtgagacccactcagtggtaggacccacca 236  Q
    ||||||||||  |||| |||||||||| ||| |||||||||||||||||  |||||||||| ||||||| |||  ||||||| |||||||||| ||||||    
T  24977187 tccatttcttacatttagagagataaataca-ataaaatcttgaaaaaaaataaaatataactaatgattgtggaacccacttagtggtaggatccacca 24977285  T
Q  237 tctattttttgggtctatctctctc 261  Q
    ||||||||||| |||||||||||||    
T  24977286 tctattttttgtgtctatctctctc 24977310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 2845190 - 2845289
Alignment:
Q  116 atcctccccatttatgtgtttctccatttct-tcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacc 214  Q
    |||||| |||||||||| |||||| |||||| |||||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||| ||||    
T  2845190 atcctctccatttatgtttttctctatttctatcaatttggagagataaatacacacaaaattttgaaaatagtaaaatataattaatgatggtgggacc 2845289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 136 - 298
Target Start/End: Original strand, 39426156 - 39426317
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    ||||||||||| || |||||||||||| |||| || |   ||||  ||||||||||| |||||||||||| ||| |||||| | |||||||||||||||     
T  39426156 tctccatttctcca-tttggagagatatagactcaaattttcttagaaaaagtaaaaaataattaatgatagtgggacccaattagtggtaggacccact 39426254  T
Q  236 atctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggaga 298  Q
    ||||||||| || |||||||||||||||| |||   |  ||||||||||||| ||||||||||    
T  39426255 atctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatggaga 39426317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 196 - 309
Target Start/End: Complemental strand, 32361377 - 32361264
Alignment:
Q  196 aattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatgg 295  Q
    ||||||||||| || |||| ||| ||| |||||| ||||||||||| ||||| ||| ||||||||||||||| |||||||| | |||||| |||||||||    
T  32361377 aattaatgatgatgggacctacttagtagtaggatccaccatctatcttttgtgtccatctctctccaacttacaaaactctaattatttcaccaaatgg 32361278  T
Q  296 agaggatcttcacc 309  Q
    ||||||| ||||||    
T  32361277 agaggattttcacc 32361264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 222 - 310
Target Start/End: Complemental strand, 7840723 - 7840635
Alignment:
Q  222 tggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||||| | ||||||| | |||||||||||||    
T  7840723 tggtaggacccatcatctatttcttgtgtctatctctctccaacttacaaaactccatttattctgccaaatgaataggatcttcaccc 7840635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 46608504 - 46608409
Alignment:
Q  137 ctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccac 234  Q
    |||||||||||| ||||||||| |||||||||||  || | ||||||||||||||| |||||||||||||||| | |||||| |||||||||||||||    
T  46608504 ctccatttcttccatttggagaaataaagacaca--aagttttgaaaaaagtaaaaaataattaatgatggtgggtcccacttagtggtaggacccac 46608409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 5047510 - 5047377
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    ||||||||||||| |||| ||||||||||| |||| ||||  ||||||||| || || |||||||||||||||| |||||||  |||||||||| |||      
T  5047510 tctccatttcttccatttagagagataaaggcacaaaaaagtttgaaaaaa-tataaaataattaatgatggtgggacccacatagtggtaggatccatt 5047412  T
Q  236 atctattttttgggtctatctctctccaacttgca 270  Q
    ||||||||| ||  || |||||||||||| |||||    
T  5047411 atctattttatgcatcaatctctctccaaattgca 5047377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 52280123 - 52280034
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| |||||||||||||||| || ||||| |||| ||||||||||||  ||||||||  |||||||||||||||| ||||||    
T  52280123 aaaaagtaaaaaataattaatgatggtgggatccacttagtgataggacccaccacttattttttatgtctatctctctccaaattgcaa 52280034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 30077728 - 30077639
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| |||||||||||| ||| ||| |||| |||| ||| ||||||||  ||||||||| |||||||||||||||| ||||||    
T  30077728 aaaaagtaaaaaataattaatgatagtgggactcacttagtgatagaacccaccacttattttttgtgtctatctctctccaaattgcaa 30077639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 40988658 - 40988723
Alignment:
Q  134 tttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatt 199  Q
    ||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  40988658 tttctccattttttctatttggagagataaagacacacaaaattttgaaaaaagtaaaaaataatt 40988723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 136 - 303
Target Start/End: Complemental strand, 32887910 - 32887744
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    ||||||||||||  ||||||||||||| |||| || ||||  ||||||||| |  || |||||||||||||||| |||||| | | |||||||| ||||     
T  32887910 tctccatttctttcatttggagagatatagactcaaaaaagtttgaaaaaaattgaaaataattaatgatggtgggacccatttaatggtaggatccact 32887811  T
Q  236 atctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatc 303  Q
    || |||||| || |||||||| |||| ||  ||    ||||||||||||||| |||||| ||||||||    
T  32887810 atttattttatgtgtctatctttctctaaactg-tgtactccatttattttatcaaatgaagaggatc 32887744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 1228563 - 1228495
Alignment:
Q  243 ttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||||  ||||| |||||||||| |||||    
T  1228563 ttttgtgtctgtctctctccaaattgcaaaactccatttattttagtaaatgaagaggatcttaacccg 1228495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 45970805 - 45970861
Alignment:
Q  150 atttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 206  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  45970805 atttgaagagataaagacacacaaaattttgaaaaaagtaaaaaataattaatgatg 45970861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 23916007 - 23916124
Alignment:
Q  110 gttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtg 209  Q
    |||| ||||||| |||||| | | ||||||||||| ||  ||||||||| ||||| ||||| ||||| |||||||||||  || ||||||||||||||||    
T  23916007 gttacaatcctctccatttgtatttttctccatttatttcatttggagatataaaaacaca-aaaat-ttgaaaaaagtttaaaataattaatgatggtg 23916104  T
Q  210 agacccactcagtggtagga 229  Q
     |||||||  ||||||||||    
T  23916105 ggacccacgtagtggtagga 23916124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 26860134 - 26860056
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctct 260  Q
    ||||||||||| |||||||||||| ||| || ||||| |||| ||||||| || ||||||||| || ||||||||||||    
T  26860134 aaaaagtaaaaaataattaatgattgtgggatccacttagtgataggacctactatctattttatgtgtctatctctct 26860056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 110 - 246
Target Start/End: Original strand, 44483687 - 44483822
Alignment:
Q  110 gttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttg-aaaaaagtaaaatataattaatgatggt 208  Q
    ||||| ||| ||||||||||||   |||||||||||||  ||||| ||||||||||||||  | ||| ||| |||||| ||||| |||||||||||||||    
T  44483687 gttaggatcttccccatttatgaccttctccatttcttgcatttgaagagataaagacac--acaattttgaaaaaaaataaaaaataattaatgatggt 44483784  T
Q  209 gagacccactcagtggtaggacccaccatctatttttt 246  Q
    |  | ||| | | ||||||||||||| |||| ||||||    
T  44483785 ggaatccatttaatggtaggacccacaatctttttttt 44483822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 246
Target Start/End: Original strand, 7844939 - 7845043
Alignment:
Q  142 tttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctat 241  Q
    ||||||| ||||| ||||||||||| ||| | ||  |||||||||||| ||  |||||||| |||||| ||| |||| |||||||||| |||  ||||||    
T  7844939 tttcttccatttgaagagataaagatacaaagaagtttgaaaaaagtataaactaattaataatggtgggacacacttagtggtaggatccaatatctat 7845038  T
Q  242 ttttt 246  Q
    |||||    
T  7845039 ttttt 7845043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 24413354 - 24413291
Alignment:
Q  194 ataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctc 257  Q
    |||||||||||||||| |||||| | | || |||||||||||||| |||||||| |||||||||    
T  24413354 ataattaatgatggtgggacccatttaatgataggacccaccatccattttttgtgtctatctc 24413291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 110 - 310
Target Start/End: Complemental strand, 30210866 - 30210666
Alignment:
Q  110 gttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttga-aaaaagtaaaatataattaatgatggt 208  Q
    ||||| |||||| ||||||||||  | |||||||| ||| |||| |||||||||||||||| |||| ||  | ||||  || || ||  ||||||||| |    
T  30210866 gttaggatcctctccatttatgttgtcctccatttattctatttagagagataaagacacaaaaaaactgaagaaaatatataaaatcgttaatgatgat 30210767  T
Q  209 gagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcac 308  Q
    | |||||||  | |  || ||| ||||||| |||||||  ||||||||||||| ||  ||  ||||||||||| |||||||||||| ||| |||||| ||    
T  30210766 gggacccacaaaataatatgactcaccatcaattttttttgtctatctctctctaaactg-taaactccatttgttttaccaaatgaagaagatcttaac 30210668  T
Q  309 cc 310  Q
    ||    
T  30210667 cc 30210666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 5803890 - 5803810
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccca 216  Q
    |||||||||  || |||| | |||||||||||||| || ||||| |||||| || || ||||||||||| |||||||||||    
T  5803890 tctccattttctctatttagtgagataaagacacaaaatatctttaaaaaaatataaaataattaatgaaggtgagaccca 5803810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 309
Target Start/End: Complemental strand, 30860786 - 30860726
Alignment:
Q  249 gtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacc 309  Q
    |||||| ||||||||||||||||||||||||| ||||| | |||||  || ||||||||||    
T  30860786 gtctatatctctccaacttgcaaaactccattcattttgctaaatgatgaagatcttcacc 30860726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 6948899 - 6948825
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccacca--tctattttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| || ||||| |||| ||||||||||||  | ||||||||  |||||||||||||||| ||||||    
T  6948899 taatgatggtgggatccacttagtgataggacccaccacttatattttttttgtctatctctctccaaattgcaa 6948825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 7783288 - 7783237
Alignment:
Q  158 agataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtg 209  Q
    |||||||||||| |||||| |  |||||| ||||||||||||||||||||||    
T  7783288 agataaagacacgtaaaatttaaaaaaaattaaaatataattaatgatggtg 7783237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 229
Target Start/End: Original strand, 26372212 - 26372290
Alignment:
Q  150 atttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtagga 229  Q
    ||||| ||||||| |||| || ||||| ||| ||||||||||| |||||||||| ||||| |||||||| | ||||||||    
T  26372212 atttgaagagatatagactcaaaaaat-ttggaaaaagtaaaaaataattaatggtggtgggacccacttaatggtagga 26372290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 42720888 - 42720837
Alignment:
Q  135 ttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaa 186  Q
    |||||||||||||  |||| |||||||||||||||||||| | |||||||||    
T  42720888 ttctccatttctttcatttagagagataaagacacataaagttttgaaaaaa 42720837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 1609680 - 1609622
Alignment:
Q  124 catttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaa 182  Q
    ||||||||| |||  |||||||||  |||| ||||| ||||||||||||||||||||||    
T  1609680 catttatgtcttttcccatttctttcatttagagaggtaaagacacataaaatcttgaa 1609622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 26768886 - 26768940
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacca 236  Q
    ||||||||||| |||||||||||||||||||| |||| | || ||| ||||||||    
T  26768886 aaaaagtaaaaaataattaatgatggtgagactcacttaatgatagaacccacca 26768940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 32618791 - 32618919
Alignment:
Q  181 aaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatt 280  Q
    |||||| |||||  ||||||||||||||| |||| ||| | | |||||| |||| ||||| ||| |  ||| |||||||||||| |||  | ||||||||    
T  32618791 aaaaaactaaaaagtaattaatgatggtgggacctacttaatagtaggatccactatcta-tttatatgtccatctctctccaaattg-gatactccatt 32618888  T
Q  281 tattttaccaaatggagaggatcttcacccg 311  Q
    |||| | ||||||| |||||||||| |||||    
T  32618889 tattatgccaaatgaagaggatctttacccg 32618919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 18107389 - 18107316
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatctattttttgg-gtctatctctctccaacttgcaa 271  Q
    ||||||||||| || ||| | |||| ||||||||||||  |||||||| | |||||||||||||||| ||||||    
T  18107389 taatgatggtgggatccatttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 18107316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 19910511 - 19910577
Alignment:
Q  150 atttggagagataaagacacataaaatcttgaaaaaag-taaaatataattaatgatggtgagacccac 217  Q
    |||||||||||||||  |||||||||| |||||||||  ||||||||||||||| |||||  |||||||    
T  19910511 atttggagagataaa--cacataaaattttgaaaaaaaataaaatataattaataatggtatgacccac 19910577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 339
Target Start/End: Complemental strand, 49214215 - 49214187
Alignment:
Q  311 gcaaactcctagcttcttctttaaaaatt 339  Q
    |||||||||||||||||||||||||||||    
T  49214215 gcaaactcctagcttcttctttaaaaatt 49214187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 49384788 - 49384719
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    |||||||||| || ||||  |||||||| ||||||  ||||||||||||||||| ||  |||||||||||||    
T  49384788 tctccatttcctccatttaaagagataaggacaca--aaatcttgaaaaaagtataaagtaattaatgatgg 49384719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 152; Significance: 3e-80; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 131 - 310
Target Start/End: Original strand, 27033591 - 27033770
Alignment:
Q  131 gtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggac 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||    
T  27033591 gtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggatccacttagtggtaggac 27033690  T
Q  231 ccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  27033691 ccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcaccc 27033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 108 - 310
Target Start/End: Complemental strand, 43720105 - 43719903
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  43720105 gggttaggatcttctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaaataaaatataattaatgatgg 43720006  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||||| ||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  43720005 tgggacccacttagtggtaggacccacaatttattttttgtgtctatctctctccaacttgcaaaactccatttattttgttaaatggagaggatcttca 43719906  T
Q  308 ccc 310  Q
    |||    
T  43719905 ccc 43719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 108 - 310
Target Start/End: Original strand, 2229900 - 2230102
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| ||||||  |||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2229900 gggttaggatcctcttcatttatgtgtttctctatttctttaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 2229999  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    ||  | ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  2230000 tggaaaccacttagtggtaggacccatcatctattttttgtgtctatctctctccaacttgcaaaactccaattattttgccaaatggagaggatgttca 2230099  T
Q  308 ccc 310  Q
    |||    
T  2230100 ccc 2230102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 126 - 310
Target Start/End: Complemental strand, 19830572 - 19830387
Alignment:
Q  126 tttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaag-taaaatataattaatgatggtgagacccactcagtgg 224  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||| | |||    
T  19830572 tttatgtgtttttccatttcttcaatttggagagataaagacacataaaatctttaaaaaaggtaaaatataattaatgatggtgggacccacttaatgg 19830473  T
Q  225 taggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19830472 taggacccaccatctattttttgtgtctatttctccccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 19830387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 110 - 310
Target Start/End: Original strand, 34373750 - 34373950
Alignment:
Q  110 gttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtg 209  Q
    ||||| |||||| ||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34373750 gttaggatcctctccatcaatgtgtttcttcattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtg 34373849  T
Q  210 agacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacc 309  Q
     |||| | | |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||    
T  34373850 ggacctaattagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacacaatttattttgccaaatggagagaatcttcacc 34373949  T
Q  310 c 310  Q
    |    
T  34373950 c 34373950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 108 - 308
Target Start/End: Original strand, 40851690 - 40851891
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatat-aattaatgatg 206  Q
    ||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  40851690 gggttaggatcctctccatttatgtatttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatatgatttaatgatg 40851789  T
Q  207 gtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttc 306  Q
    ||  |||||||| |||||| | ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  40851790 gtaggacccacttagtggttgaacccaccatctattttttgtgtctatctttctccaacttgcaaaactccatttattttgtcaaattgagaggatcttc 40851889  T
Q  307 ac 308  Q
    ||    
T  40851890 ac 40851891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 311 - 444
Target Start/End: Complemental strand, 20749418 - 20749285
Alignment:
Q  311 gcaaactcctagcttcttctttaaaaattatccttgggttggaattgttcctcttcaagtcacttttctaaggttcttctctctttcaactcaaaaagag 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20749418 gcaaactcctagcttcttctttaaaaattatccttgggttggaattgttcctcttcaagtcacttttctaaggttcttctctctttcaactcaaaaagag 20749319  T
Q  411 gtgaaggtgagggagttacgggagttgattgatg 444  Q
    ||||||||||||||||||||||||||||||||||    
T  20749318 gtgaaggtgagggagttacgggagttgattgatg 20749285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 123 - 292
Target Start/End: Complemental strand, 34373728 - 34373559
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagt 222  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  34373728 ccatttatgtgtttctccatttcttcaatttggagagataaagagacaaaaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagt 34373629  T
Q  223 ggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaa 292  Q
    ||||||||||||||||||||||| | |||||||||| |  |||||||||||||| ||||||||| |||||    
T  34373628 ggtaggacccaccatctatttttagtgtctatctctatggaacttgcaaaactctatttattttgccaaa 34373559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 123 - 307
Target Start/End: Original strand, 46167325 - 46167509
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagt 222  Q
    |||||||||||||| |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| |||||  || ||||| |||    
T  46167325 ccatttatgtgtttttccatttcttcaatttagagagataaagacaaatataatcttgaaaaaagtaaaatataattaataatggtaggatccacttagt 46167424  T
Q  223 ggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| | ||||||||||||| ||||    
T  46167425 ggtaggacccaccatatattttttgtgtctatctctctccaacttacaaaactccatttattttgctaaatggagaggatgttca 46167509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 115 - 311
Target Start/End: Original strand, 48084743 - 48084940
Alignment:
Q  115 aatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacc 214  Q
    ||||||| ||||||||||  |||||||||||| | ||||||||||||| ||||||| ||||| ||||||||| ||||| ||||||||||||| || ||||    
T  48084743 aatcctctccatttatgtccttctccatttctaccatttggagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggacc 48084842  T
Q  215 cactcagtggtaggacccaccatctatt-ttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    |||| |||||| |||||||||||||||| ||||| ||||||||||| |||| ||||||||||| |||||||||| ||||||||||||||||| |||||    
T  48084843 cacttagtggttggacccaccatctattcttttgtgtctatctctccccaaattgcaaaactcaatttattttagcaaatggagaggatcttaacccg 48084940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 116 - 293
Target Start/End: Complemental strand, 550966 - 550790
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||| || ||||||||||||||||| |||| |||||| |||||    
T  550966 atcctctccatttatgtctttctccatttcttccatttggagagataaagatacataaaatttttaaaaaagtaaaatataaataataatggtgggaccc 550867  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaat 293  Q
    ||| | || ||||| |||||||||||||||||  | ||||| ||||||| |||| |||||||||||||||| ||||||    
T  550866 acttaatgataggatccaccatctattttttgtatatatctttctccaaattgc-aaactccatttattttgccaaat 550790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 123 - 286
Target Start/End: Original strand, 12402897 - 12403061
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaa-aagtaaaatataattaatgatggtgagacccactcag 221  Q
    |||||||||||||||| |||||  | ||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| ||| |||| ||    
T  12402897 ccatttatgtgtttcttcattttcttaatttggagagataaagacacataaaatcttaaaaaaaagtaaaatataattaataatggtgggactcacttag 12402996  T
Q  222 tggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttatttt 286  Q
    |||||| | |||||||||| |||||   ||||||||||||||||||||||||||| |||||||||    
T  12402997 tggtagaatccaccatctaatttttatatctatctctctccaacttgcaaaactctatttatttt 12403061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 211 - 311
Target Start/End: Original strand, 24754677 - 24754777
Alignment:
Q  211 gacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||||||| |||||||||||  |||||||||||| || |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  24754677 gacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcaccc 24754776  T
Q  311 g 311  Q
    |    
T  24754777 g 24754777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 211 - 311
Target Start/End: Original strand, 24763674 - 24763774
Alignment:
Q  211 gacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||||||| |||||||||||  |||||||||||| || |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  24763674 gacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcaccc 24763773  T
Q  311 g 311  Q
    |    
T  24763774 g 24763774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 294
Target Start/End: Complemental strand, 566898 - 566746
Alignment:
Q  141 atttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatcta 240  Q
    |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||| |||| | |||| |||||||| | || ||||| || |||| ||    
T  566898 atttcttccatttggagagataaaaatacataaaatcttga-aaaagtaaaatataaataataaaggtgggacccacttaatgataggatccgccatata 566800  T
Q  241 -ttttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatg 294  Q
     |||||||  ||||||||||||||| |||| |||||||||||||||| |||||||    
T  566799 tttttttgtatctatctctctccaaattgc-aaactccatttattttgccaaatg 566746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 271
Target Start/End: Complemental strand, 31523808 - 31523663
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| ||||||||   ||||||||||| ||| |||| |||||||||||||||||||||          ||||||| |||||||||||||||| |||||    
T  31523808 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggaccc 31523719  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||| |||  ||||||||||||  ||||||||| |||||||||||||||| ||||||    
T  31523718 acttagtaataggacccaccacttattttttgtgtctatctctctccaaattgcaa 31523663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 271
Target Start/End: Original strand, 42613015 - 42613160
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| ||||||||   ||||||||||| ||| |||| |||||||||||||||||||||          ||||||| |||||||||||||||| |||||    
T  42613015 atcctctccatttataaatttctccatttgttctatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggaccc 42613104  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||| |||| ||||||||||||  ||||||||  |||||||||||| ||| ||||||    
T  42613105 acttagtgataggacccaccacttattttttttgtctatctctcttcaaattgcaa 42613160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 311
Target Start/End: Original strand, 29586282 - 29586455
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    |||||||||| || |||| |||||||||||||||| ||||  | ||||||  |||||  |||||||||||||||||||||||| | | ||| |||  ||     
T  29586282 tctccatttcatccatttagagagataaagacacaaaaaaattcgaaaaac-taaaaagtaattaatgatggtgagacccacttaatagtaagacttact 29586380  T
Q  236 atctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacccg 311  Q
    ||||||||| || ||||||||||||||||  ||| | |||||||||||| | | ||||| |||||||||| |||||    
T  29586381 atctattttatgtgtctatctctctccaaactgc-atactccatttattatgctaaatgaagaggatctttacccg 29586455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 52859523 - 52859441
Alignment:
Q  124 catttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgat 205  Q
    ||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||    
T  52859523 catttatgtctttctccatttctaccatttggagaaataaatacacataaaatcttaaaaaagagtaaaatataattaatgat 52859441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 49679354 - 49679265
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| |||||||||||||||| |||||| | |||| |||||||| |||  ||||||||| |||||||||||||||| ||||||    
T  49679354 aaaaagtaaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattgcaa 49679265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 24647905 - 24647957
Alignment:
Q  258 tctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  24647905 tctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 24647957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 264
Target Start/End: Complemental strand, 40810506 - 40810357
Alignment:
Q  115 aatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaag-taaaatataattaatgatggtgagac 213  Q
    ||||||| |||||||||| ||| |||||||||   ||| ||||||||| | |||||  |||| |||||||||  ||||| ||||||||||||| || |||    
T  40810506 aatcctctccatttatgtctttttccatttctatcattaggagagatataaacaca--aaattttgaaaaaaaataaaaaataattaatgatgatgggac 40810409  T
Q  214 ccactcagtggtaggacccaccatctatt-ttttgggtctatctctctccaa 264  Q
    ||||| ||||||  ||||||||||||||| ||||  || |||||||||||||    
T  40810408 ccacttagtggttagacccaccatctattcttttttgtttatctctctccaa 40810357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 304
Target Start/End: Complemental strand, 28229472 - 28229365
Alignment:
Q  196 aattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatgg 295  Q
    |||||||||||||||||| || | | || |||||| ||||| |||||||||| |||||| ||| ||| | |||| | |||||||||||||||  ||||||    
T  28229472 aattaatgatggtgagactcatttaatgataggactcaccacctattttttgtgtctatatctttcctaattgc-acactccatttattttaataaatgg 28229374  T
Q  296 agaggatct 304  Q
    |||||||||    
T  28229373 agaggatct 28229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 32577476 - 32577526
Alignment:
Q  135 ttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaa 186  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  32577476 ttctccatttcttctatttggagagataaagacaca-aaaatcttgaaaaaa 32577526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 260
Target Start/End: Original strand, 1995435 - 1995513
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctct 260  Q
    ||||||||||| |||||||||||||||||||| |||| | ||||||||| ||  ||||||||| |  ||||||||||||    
T  1995435 aaaaagtaaaaaataattaatgatggtgagactcacttattggtaggactcattatctattttctatgtctatctctct 1995513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 224 - 310
Target Start/End: Original strand, 33632855 - 33632940
Alignment:
Q  224 gtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    |||||| |||| ||||||||| || |||||||||||||||| |||| |  ||||||||||| ||||||||||||| |||||| ||||    
T  33632855 gtaggatccactatctattttatgtgtctatctctctccaaattgc-atgctccatttattataccaaatggagaagatctttaccc 33632940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 303
Target Start/End: Complemental strand, 10474568 - 10474402
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    |||||||||| |  ||||||||||||| ||||||| ||||  || |||||| |||||  ||||||||| |||||  || |||| | | |||||| |||      
T  10474568 tctccatttcatatatttggagagatatagacacacaaaaatttcaaaaaactaaaaagtaattaatgttggtggaactcacttaatagtaggatccatt 10474469  T
Q  236 atctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatc 303  Q
    ||||||||| || |||||| |||||| || |||| | |||||||||||| |  ||||| |||||||||    
T  10474468 atctattttatgtgtctatatctctcaaaattgc-atactccatttattatgtcaaatagagaggatc 10474402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 25285966 - 25285810
Alignment:
Q  135 ttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccac 234  Q
    |||||||||||||| ||||| ||||||||| ||||| |||||| | |||||||| ||| | |||| ||||||||| | | || | | || ||||| ||||    
T  25285966 ttctccatttcttccatttgtagagataaaaacaca-aaaatc-taaaaaaagtcaaaaaaaattgatgatggtgggtctcatttaatgataggatccac 25285869  T
Q  235 catctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatg 294  Q
     ||||||||| || ||||||||||||  || |||| |  ||||||| |||||||||||||    
T  25285868 tatctattttatgtgtctatctctctataaattgc-attctccattaattttaccaaatg 25285810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 36354393 - 36354323
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 206  Q
    |||| ||||| ||||||| || ||||||||||||| ||||||||||||| |||| |  |||||||||||||    
T  36354393 tctcaatttcctcaatttagaaagataaagacacaaaaaatcttgaaaatagtatacaataattaatgatg 36354323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 46461943 - 46461891
Alignment:
Q  2 ttttatatttgccacatgtccaatatctatgaagtgaaatggtatacatggag 54  Q
    |||||||||||||||||||| || ||| ||||| |||||||||||| ||||||    
T  46461943 ttttatatttgccacatgtcaaacatccatgaaatgaaatggtataaatggag 46461891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 3009174 - 3009233
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaa 175  Q
    |||||| ||||||||   ||||||||||| ||| |||| |||||||||||||||||||||    
T  3009174 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa 3009233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 303
Target Start/End: Complemental strand, 30235492 - 30235418
Alignment:
Q  228 gacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatc 303  Q
    ||||||| |||||||||||  |||||||||||| ||| |||| | ||||||||||||||| |||||| ||| ||||    
T  30235492 gacccacaatctattttttatgtctatctctcttcaaattgc-atactccatttattttaacaaatgaagatgatc 30235418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 49289093 - 49289042
Alignment:
Q  124 catttatgtgtttctccatttcttcaatttggagagataaagacacataaaa 175  Q
    ||||||||| ||||||||||| ||  ||||||||| ||||||||||||||||    
T  49289093 catttatgtttttctccatttgtttcatttggagaaataaagacacataaaa 49289042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 2310261 - 2310324
Alignment:
Q  141 atttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 206  Q
    |||||||| |||| |||||||||||||||  ||||| || || ||||||||| |||||||||||||    
T  2310261 atttcttccatttagagagataaagacac--aaaattttaaagaaagtaaaaaataattaatgatg 2310324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 41727095 - 41727030
Alignment:
Q  110 gttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaa 175  Q
    |||| ||||||| | |||||||| |||||| |||||||| ||||| | ||| ||||||||||||||    
T  41727095 gttaaaatcctctcgatttatgtttttctctatttcttctatttgaaaagacaaagacacataaaa 41727030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 20485868 - 20485808
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaat 176  Q
    |||||| |||||||  | ||||||||||||| | ||||||||||||| | |||||||||||    
T  20485868 atcctctccatttaaatttttctccatttctaccatttggagagatataaacacataaaat 20485808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 305
Target Start/End: Original strand, 51716671 - 51716703
Alignment:
Q  273 actccatttattttaccaaatggagaggatctt 305  Q
    |||||||||||||||| ||||||||||||||||    
T  51716671 actccatttattttactaaatggagaggatctt 51716703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 143; Significance: 6e-75; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 108 - 310
Target Start/End: Complemental strand, 16555 - 16353
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||     
T  16555 gggttaggatcctctcaatttatgtgtttctccatttcttcaatttggagagataaaattacataaaatcttgaaaaaaataaaatataattaatgatga 16456  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 307  Q
    || |||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| || || ||||||||||||||    
T  16455 tgggacccacttagtggtaggacccaccatttattttttgtgtctatctctctccaacttgcaaaactccatttattttgcctaacggagaggatcttca 16356  T
Q  308 ccc 310  Q
    |||    
T  16355 ccc 16353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 108 - 311
Target Start/End: Original strand, 7064 - 7271
Alignment:
Q  108 gggttagaatcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 207  Q
    ||||||| |||||| |||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  7064 gggttaggatcctctccatttatgtgtttcttcatttcttcaatttgcagagataaagacatataaaatcttgaaaaaaataaaatataattaatgatgg 7163  T
Q  208 tgagacccactcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactcc----atttattttaccaaatggagaggatc 303  Q
    ||  ||||||| | | |||||||||||||||||||||||| |||||||||||||||||||||||||||||    ||||||||| ||||||||||||||||    
T  7164 tggaacccacttaatagtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttattttgccaaatggagaggatc 7263  T
Q  304 ttcacccg 311  Q
    ||||||||    
T  7264 ttcacccg 7271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 113; Significance: 5e-57; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 116 - 310
Target Start/End: Complemental strand, 9348 - 9157
Alignment:
Q  116 atcctccccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagaccc 215  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||||||| ||||| ||||||| ||||||    |||||||||||||||||||  | ||    
T  9348 atcctctccatttatgtgtttctcaatttcttccatttggagagataaaggcacatgaaatcttaaaaaaat---aatataattaatgatggtggaatcc 9252  T
Q  216 actcagtggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||| |||||| |||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  9251 acttagtggttggacccaccatctattttctgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatcttcaccc 9157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 142 - 305
Target Start/End: Complemental strand, 6559 - 6396
Alignment:
Q  142 tttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctat 241  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||| | ||| ||||||||||||||||||    
T  6559 tttcttcaattttgagagataaagacacataaaatcttggaaaaagtaaaatataattaatgatggttgtacccatttagttgtaggacccaccatctat 6460  T
Q  242 tttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatctt 305  Q
    |||||| |||| ||||| ||||||||||||||  ||||||||||||| |||| |||||||||||    
T  6459 tttttgtgtctgtctctttccaacttgcaaaatcccatttattttacgaaatagagaggatctt 6396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 123 - 306
Target Start/End: Complemental strand, 73983 - 73817
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagt 222  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||                 
T  73983 ccatttatgtgtttctccatttcttcaatttagagagataaaaacacataaaatcttgaaaaaaataaaatataattaatgatgatg------------- 73897  T
Q  223 ggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttc 306  Q
        ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  73896 ----ggacccaccatctatattttgcgtctatctctctccaacttgcaaaacaccatttattttgccaaatagagaggatcttc 73817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 136 - 310
Target Start/End: Original strand, 13641 - 13799
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccacc 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||    
T  13641 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtg-----------------ggacccacc 13723  T
Q  236 atcta-ttttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||||| ||||||  |||||||||||||||||| ||||||||| ||||||||| ||||||||||| |||||||||||    
T  13724 atctatttttttttgtctatctctctccaactagcaaaactctatttattttgccaaatggagaagatcttcaccc 13799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 123 - 310
Target Start/End: Complemental strand, 22585 - 22399
Alignment:
Q  123 ccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccactcagt 222  Q
    |||||||||| | ||||||||||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||||| || |||  || |||| |||    
T  22585 ccatttatgtctatctccatttcttacatttagagagataaatacacataaaatcttgaaaaaagtaaaatataattaattattgtggaactcacttagt 22486  T
Q  223 ggtaggacccaccatctattttttgggtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 310  Q
    ||||||| |||| |||||||||||| |||||||||| |  || |||| |||||||||||||||| | ||||| |||||||||| ||||    
T  22485 ggtaggatccactatctattttttgtgtctatctctttgtaaattgc-aaactccatttattttgctaaatgcagaggatcttaaccc 22399  T

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Target: scaffold0171 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 17390 - 17311
Alignment:
Q  182 aaaaagtaaaatataattaatgatggtgagacccactcagtggtaggacccaccatctattttttgggtctatctctctc 261  Q
    ||||||||||| |||||||||||||||| |||||||| |||| ||||||||| ||  ||||||||| |||||||||||||    
T  17390 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccagcacttattttttgtgtctatctctctc 17311  T

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Target: scaffold0468 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 5559 - 5625
Alignment:
Q  140 catttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 206  Q
    ||||||||| ||||||||||||||||||| | | ||  |||||||||||| || |||||||||||||    
T  5559 catttcttccatttggagagataaagacataaagaagtttgaaaaaagtataaaataattaatgatg 5625  T

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Target: scaffold0664 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 4768 - 4695
Alignment:
Q  199 taatgatggtgagacccactcagtggtaggacccaccatcta-ttttttgggtctatctctctccaacttgcaa 271  Q
    ||||||||||| || ||||| |||| ||||||||||||  || ||||||| |||||||||||||||| ||||||    
T  4768 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 4695  T

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Target: scaffold0252 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 10604 - 10528
Alignment:
Q  136 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgaga 212  Q
    ||||||||||||  ||||| ||||||||| | ||| |||||||| ||||||||| ||  | ||||||||||||||||    
T  10604 tctccatttctttcatttgtagagataaaaatacaaaaaatcttaaaaaaagtataaagttattaatgatggtgaga 10528  T

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