View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13197_high_3 (Length: 509)
Name: NF13197_high_3
Description: NF13197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13197_high_3 |
 | |
|
| [»] chr4 (9 HSPs) |
| |
|
Alignment Details
Target: chr4 (Bit Score: 248; Significance: 1e-137; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 137 - 509
Target Start/End: Original strand, 47113122 - 47113490
Alignment:
| Q |
137 |
aataaagtttggatctattttgcgcataaactataaaattataaattagatactaaaagtgtacctttgtatcaattcttgaagcatgaaaaattcttca |
236 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
47113122 |
aataaagtttggatctattttgcgcataaattataaaattataaattagatactaaaagtgtacctttgtatcaattcttgaagcatg-aaaattcttca |
47113220 |
T |
|
| Q |
237 |
atgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtggaactagaaaac--tagaacatatttctattttgt |
334 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| |
|
|
| T |
47113221 |
atgatatgaagactctatgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtggaactaaaaaactatagagcatatttctattttgt |
47113320 |
T |
|
| Q |
335 |
attcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacacacactactatcaaatagaaggtgttgactcatctta |
434 |
Q |
| |
|
|||||||||||| |||||| |||||||||| ||| | |||||||||||||||||||||||||| |||| ||| |||||||||||||||| |
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|
| T |
47113321 |
attcttgttgttgtgttgt---gtgttttgatcaaatcac--aag-tctatttataagtcacacacactactattaaattgaaagtgttgactcatctta |
47113414 |
T |
|
| Q |
435 |
atgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatgctaatttacttaaaaga |
509 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
47113415 |
atgactcttttaaattcatatggtcaatcattgtaaaaagcaattaacatatgtcaatgctaatttacttaaaaga |
47113490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 109 - 509
Target Start/End: Complemental strand, 236442 - 236045
Alignment:
| Q |
109 |
aaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaattataaattagatactaaaagtgtacctttgtat |
208 |
Q |
| |
|
|||| |||||||| ||||||| || | ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
236442 |
aaaatagtgttcataacacatgcaacggaataaagtttggatctattttgcgcttaaattataaaattataaattagatactaaaagtgtacctttgtat |
236343 |
T |
|
| Q |
209 |
caattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtggaact-- |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
236342 |
caattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtggaactaa |
236243 |
T |
|
| Q |
307 |
agaaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacacacactact |
406 |
Q |
| |
|
| ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
236242 |
aaaaaactagagcatatttctattttgtattcttgttgttgtgttgt---gtgttttgatcaaatcacttaaagtctatttataagtcacacacactact |
236146 |
T |
|
| Q |
407 |
atcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatgctaatttacttaa |
505 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||| || |||| |||||| || ||||| ||||||||||| | ||||||||||| |||||||| |
|
|
| T |
236145 |
atcaaatagaag--gttgactcatcttaatgacctttttaattttatatggtcaattattgtaaagagcaattaacaaaggttaatgctaa-ttacttaa |
236049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 102 - 507
Target Start/End: Complemental strand, 40053877 - 40053483
Alignment:
| Q |
102 |
tgaagtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaattataaattagatactaaaagtgtacc |
201 |
Q |
| |
|
||||||||||| |||||||| ||||||| || ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
40053877 |
tgaagtaaaaatagtgttcataacacatgcaacagaataaagtttggatctattttgcgcttaaattataaaattgtaaattagatactaaaagtgtacc |
40053778 |
T |
|
| Q |
202 |
tttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtg |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40053777 |
tttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtg |
40053678 |
T |
|
| Q |
302 |
gaactag--------aaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagt |
393 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||| |||||| |||||||||||| || | |||||||| || |
|
|
| T |
40053677 |
gaactagaagaaaaaaaaactagaacatat------------ttcttgttgttgtgttgt-------tttgatcaaatcacttgaggtctatttataggt |
40053597 |
T |
|
| Q |
394 |
cacacacactactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatg |
492 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||||||| || ||| |||||||||||||||||||| |
|
|
| T |
40053596 |
cacacacactactatcaaatagaatgtgttgactcatcttagtgattcttttaaattcatatggtcaatcattgt-aaatgcaattaacatatgttaatg |
40053498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 102 - 507
Target Start/End: Original strand, 40052409 - 40052803
Alignment:
| Q |
102 |
tgaagtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaattataaattagatactaaaagtgtacc |
201 |
Q |
| |
|
||||||||||| |||||||| ||||||| || ||||||||||||||||||||||||| |||| ||||||||| |||||||||||| ||||||||||| |
|
|
| T |
40052409 |
tgaagtaaaaatagtgttcataacacatgcaacagaataaagtttggatctattttgcgcttaaattataaaattgtaaattagatacaaaaagtgtacc |
40052508 |
T |
|
| Q |
202 |
tttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtg |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40052509 |
tttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtg |
40052608 |
T |
|
| Q |
302 |
gaactag--------aaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagt |
393 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||| |||||| |||||||||||| || | |||||||| || |
|
|
| T |
40052609 |
gaactagaagaaaaaaaaactagaacatat------------ttcttgttgttgtgttgt-------tttgatcaaatcacttgaggtctatttataggt |
40052689 |
T |
|
| Q |
394 |
cacacacactactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatg |
492 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||||||| || ||| |||||||||||||||||||| |
|
|
| T |
40052690 |
cacacacactactatcaaatagaatgtgttgactcatcttagtgattcttttaaattcatatggtcaatcattgt-aaatgcaattaacatatgttaatg |
40052788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 105 - 507
Target Start/End: Complemental strand, 39220491 - 39220102
Alignment:
| Q |
105 |
agtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaattataaattagatactaaaagtgtaccttt |
204 |
Q |
| |
|
|||||||| ||||||| ||||||| || | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39220491 |
agtaaaaaaggtgttcataacacatgcaacggaataaagtttggatctattttgcgcataaattataaaattataaattagatactaaaagtgtaccttt |
39220392 |
T |
|
| Q |
205 |
gtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtggaa |
304 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
39220391 |
gtatcaattcttgaagcatg-aaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttactctcaacctttgagtagtggaa |
39220293 |
T |
|
| Q |
305 |
ctag-aaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacacacact |
403 |
Q |
| |
|
|||| ||||||||| ||||| ||||||||||| || ||| ||||||||||||||| | |||||||| ||| ||||||| |
|
|
| T |
39220292 |
ctagaaaaactagagcatat------------ttcttgttgttgtggtgt-gttttttatgatcaaatcacttaaggtctatttatagatcaaacacact |
39220206 |
T |
|
| Q |
404 |
actatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatgctaatttact |
502 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||| || ||| |||||||||||||||||||| ||||||||| |
|
|
| T |
39220205 |
actatcaaatagaatgtgttgactcatcttaatgattcttttaaattcatatggtcaatcattgt-aaatgcaattaacatatgttaatgttaatttact |
39220107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 105 - 507
Target Start/End: Complemental strand, 39227019 - 39226627
Alignment:
| Q |
105 |
agtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaattat--aaattagatactaaaagtgtacct |
202 |
Q |
| |
|
|||||||| ||||||| ||||||| || | |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
39227019 |
agtaaaaaaggtgttcataacacatgcaacggaataaagtttggatctattttgcgcataaattataaaatttacgaaattagatactaaaagtgtacct |
39226920 |
T |
|
| Q |
203 |
ttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtgg |
302 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
39226919 |
ttgtatcaattcttgaagcatgaaaa-ttcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttactctcaacctttgagtagtgg |
39226821 |
T |
|
| Q |
303 |
aactag-aaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacacaca |
401 |
Q |
| |
|
|||||| ||||||||| ||||| ||||||||||| || ||| ||||||||||||||| | |||||||| ||| ||||| |
|
|
| T |
39226820 |
aactagaaaaactagagcatat------------ttcttgttgttgtggtgtgtttttttatgatcaaatcacttaaggtctatttatagatcaaacaca |
39226733 |
T |
|
| Q |
402 |
ctactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatgctaattta |
500 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||| || ||| |||||||||||||||||||| ||||||| |
|
|
| T |
39226732 |
ctactatcaaatagaatgtgttgactcatcttaatgattcttttaaattcatatggtcaatcattgt-aaatgcaattaacatatgttaatgttaattta |
39226634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 182 - 500
Target Start/End: Complemental strand, 34859576 - 34859265
Alignment:
| Q |
182 |
ttagatactaaaagtgtacctttgtatcaattcttgaagcatgaaaaattcttca--atgatatgaagactctacgtgtatccacaccgagaccaattct |
279 |
Q |
| |
|
||||||| ||||| |||| |||||||| |||| |||| | |||||||||||||| | | | ||||||||||||||||||||||||||| | ||||| | |
|
|
| T |
34859576 |
ttagatattaaaaatgtatctttgtattaatttttgatgtctgaaaaattcttcacaaagttgtgaagactctacgtgtatccacaccgataacaattat |
34859477 |
T |
|
| Q |
280 |
taccctcaacctttgagtagtggaactagaaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaag |
379 |
Q |
| |
|
||| |||||| | |||||||| ||| ||||||||||| ||||||| | ||||||||| ||||| |||||| ||||||| | |||| |
|
|
| T |
34859476 |
tactctcaacttctgagtagtagaagaagaaaactagagcatatttgtgttttgtatt----ttgttgtgttgt---gtttcttgatcaaattagctaag |
34859384 |
T |
|
| Q |
380 |
atatatttataagtcacacacactactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaatt |
478 |
Q |
| |
|
| ||||||||||| || ||| |||| ||||||||||||||||||||| ||||| |||| ||||||| ||||||| ||||||| | |||||||||||| |
|
|
| T |
34859383 |
gtctatttataagt--catacattactgtcaaatagaaggtgttgactcttcttagtgac-cttttaatttcatatggtcaatccttttaaaaagcaatt |
34859287 |
T |
|
| Q |
479 |
aacatatgttaatgctaattta |
500 |
Q |
| |
|
|||||||| ||||||||||||| |
|
|
| T |
34859286 |
aacatatgataatgctaattta |
34859265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 20974917 - 20975022
Alignment:
| Q |
396 |
cacacactactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatgct |
494 |
Q |
| |
|
|||||| |||| || |||||||||||||||||| |||||||||| |||||| ||||||| ||||||| | |||||||||||| |||||| ||||||||| |
|
|
| T |
20974917 |
cacacattactgtcgaatagaaggtgttgactcgtcttaatgacctttttaatttcatatggtcaatctttgtaaaaagcaatcaacatacgttaatgct |
20975016 |
T |
|
| Q |
495 |
aattta |
500 |
Q |
| |
|
|||||| |
|
|
| T |
20975017 |
aattta |
20975022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 20975118 - 20975045
Alignment:
| Q |
383 |
tatttataagtcacacacactactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatatg |
456 |
Q |
| |
|
||||||||||| | | || |||||||||||||||||||||||||||| ||||| || |||||| |||||||| |
|
|
| T |
20975118 |
tatttataagttatatacgctactatcaaatagaaggtgttgactcaacttaacaacctttttaatttcatatg |
20975045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 228; Significance: 1e-125; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 102 - 507
Target Start/End: Original strand, 29672590 - 29672976
Alignment:
| Q |
102 |
tgaagtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaattataaattagatactaaaagtgtacc |
201 |
Q |
| |
|
|||||||||| |||||||| ||||||| || | ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
29672590 |
tgaagtaaaactagtgttcataacacatgcaacggaataaagtttggatctattttgcgcttaaattataaaattgtaaattagatactaaaagtgtacc |
29672689 |
T |
|
| Q |
202 |
tttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtg |
301 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29672690 |
tttgtatcaattcttgaagcatgaagaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtg |
29672789 |
T |
|
| Q |
302 |
gaactagaaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacacaca |
401 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||| |||||| ||||||||||||||| | |||||||| |||||||||| |
|
|
| T |
29672790 |
gaactagaaaactagagcatat------------ttcttgttgttgtgttgt-------tttgatcaaatcacttaaggtctatttataggtcacacaca |
29672870 |
T |
|
| Q |
402 |
ctactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatatg-tcaatcatcgtaaaaagcaattaacatatgttaatgctaattta |
500 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| ||| ||||||||||||||||| |||||||| || ||| |||||||||||||||||||||||||||| |
|
|
| T |
29672871 |
ctactatcaaatagaatgtgttgactcatcttagtgattcttttaaattcatatgatcaatcattgt-aaatgcaattaacatatgttaatgctaattta |
29672969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 102 - 500
Target Start/End: Complemental strand, 10567802 - 10567422
Alignment:
| Q |
102 |
tgaagtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaattat--aaattagatactaaaagtgta |
199 |
Q |
| |
|
||||||||||| ||||||| ||||||| || | |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
10567802 |
tgaagtaaaaaaggtgttcataacacatgcaacggaataaagtttggatctattttgcgcataaattataaaatttacgaaattagatactaaaagtgta |
10567703 |
T |
|
| Q |
200 |
cctttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtag |
299 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
10567702 |
cctttgtatcaattcttgaagcatgaaaa-ttcttcaatgatatgaagactctacgtgtatccacaccgagaccaatttttactctcaacctttgagtag |
10567604 |
T |
|
| Q |
300 |
tggaactagaaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacaca |
399 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||| |||||| ||||||||||||||| | |||||||| |||||||| |
|
|
| T |
10567603 |
tggaactagaaaactagagcatat------------ttcttgttgttgtgttgt---gggttttgatcaaatcacttaaggtctatttataggtcacaca |
10567519 |
T |
|
| Q |
400 |
cactactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatgctaatt |
498 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||| ||||| | ||||||| |||||||| |||||| ||||||||| ||||||||||||||| |
|
|
| T |
10567518 |
cactactatcaaataaaatgtgttgactcatcttaatgac-ctttt-atttcatatggtcaatca--ataaaaa-caattaacacatgttaatgctaatt |
10567424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 102 - 500
Target Start/End: Complemental strand, 10571052 - 10570672
Alignment:
| Q |
102 |
tgaagtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaattat--aaattagatactaaaagtgta |
199 |
Q |
| |
|
||||||||||| ||||||| ||||||| || | |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
10571052 |
tgaagtaaaaaaggtgttcataacacatgcaacggaataaagtttggatctattttgcgcataaattataaaatttacgaaattagatactaaaagtgta |
10570953 |
T |
|
| Q |
200 |
cctttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtag |
299 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
10570952 |
cctttgtatcaattcttgaagcatgaaaa-ttcttcaatgatatgaagactctacgtgtatccacaccgagaccaatttttactctcaacctttgagtag |
10570854 |
T |
|
| Q |
300 |
tggaactagaaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacaca |
399 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||| |||||| ||||||||||||||| | |||||||| |||||||| |
|
|
| T |
10570853 |
tggaactagaaaactagagcatat------------ttcttgttgttgtgttgt---gtgttttgatcaaatcacttaaggtctatttataggtcacaca |
10570769 |
T |
|
| Q |
400 |
cactactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatgctaatt |
498 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||| ||||| | ||||||| |||||||| |||||| ||||||||| ||||||||||||||| |
|
|
| T |
10570768 |
cactactatcaaataaaatgtgttgactcatcttaatgac-ctttt-atttcatatggtcaatca--ataaaaa-caattaacacatgttaatgctaatt |
10570674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 137 - 427
Target Start/End: Complemental strand, 20283970 - 20283695
Alignment:
| Q |
137 |
aataaagtttggatctattttgcgcataaactataaaattataaatta-gatactaaaagtgtacctttgtatcaattcttgaagcatgaaaaattcttc |
235 |
Q |
| |
|
||||||||||||||||||||||| | |||| ||||||| | || |||| ||||| | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20283970 |
aataaagtttggatctattttgcacttaaattataaaaat-tatattaagatacaagaagtgtacctttgtatcaattcttgaagcatgaaaaattcttc |
20283872 |
T |
|
| Q |
236 |
aatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtggaactagaaaactagaacatatttctattttgta |
335 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||| ||||||| |||||||| |
|
|
| T |
20283871 |
aatgatatgaagactctacgtatatccacaccgagaccaattcttaccctcagcctttgagtagttgaacaagaaaactagagcatattt-tattttgt- |
20283774 |
T |
|
| Q |
336 |
ttcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacacacactactatcaaatagaaggtgttgact |
427 |
Q |
| |
|
||||||| |||| | |||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
20283773 |
---ttgttgtgttgtttt----------gatcaaatcacttaatgtctatttataagtcacacacactactatcaaatagaatgtgttgact |
20283695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 260011 - 260109
Alignment:
| Q |
1 |
cttgattccctttgtcccattgtatacctcttttatttgattcagttggttcaatgaaaacgtgattgaaatagaattacaactctatcacatatgaag |
99 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
260011 |
cttgattccctttgtcccattgtatatctcttttatttgattcagttggttcaatgaaaacgtgattgaaatagaattacaactctatcacatatgaag |
260109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 259 - 414
Target Start/End: Complemental strand, 8547352 - 8547201
Alignment:
| Q |
259 |
atccacaccgagaccaattcttaccctcaacctttgagtagtggaactagaaaactagaacatatttctattttgtattcttgttgttatgttgtannnn |
358 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| | |||| |||||||| |||| | |
|
|
| T |
8547352 |
atccacaccgagaccaattcttaccctcaacctttgagtagaggaactagaaaactagagcatatttctattgtatatt-ttgttgttgtgttct---gt |
8547257 |
T |
|
| Q |
359 |
nnnnnnatcaaatcacttaagatatatttataagtcacacacactactatcaaata |
414 |
Q |
| |
|
|| |||||||||||| | |||||||||| ||||||||||||||||||||| |
|
|
| T |
8547256 |
gttgtgattaaatcacttaaggtctatttataagccacacacactactatcaaata |
8547201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 422 - 493
Target Start/End: Complemental strand, 8546899 - 8546827
Alignment:
| Q |
422 |
ttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatgc |
493 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
8546899 |
ttgactcatcttaatgactcttttaaattcatatagtcaatcattgtaaaaagtaattaacatatgttaatgc |
8546827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 332
Target Start/End: Complemental strand, 26464437 - 26464348
Alignment:
| Q |
243 |
tgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtggaactagaaa-actagaacatatttctatttt |
332 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||| ||||| |||||| ||||||| |||||| |
|
|
| T |
26464437 |
tgaagactctacgtgtatccacactgagacaaattcttactttcaacttttgagtagtggaac-agaaatactagagcatatttgtatttt |
26464348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 314
Target Start/End: Original strand, 21560082 - 21560198
Alignment:
| Q |
198 |
tacctttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagt |
297 |
Q |
| |
|
|||||| |||| | || |||||| || |||| ||||| || ||| |||| ||| ||||||||||||| ||||||||||||||||||||||| |||||| | |
|
|
| T |
21560082 |
taccttcgtattagtttttgaagtataaaaatttctttaaagatgtgaaaactttacgtgtatccacgccgagaccaattcttaccctcaatctttgaat |
21560181 |
T |
|
| Q |
298 |
agtggaactagaaaact |
314 |
Q |
| |
|
|||| ||| | |||||| |
|
|
| T |
21560182 |
agtgaaacaaaaaaact |
21560198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 439
Target Start/End: Complemental strand, 26464334 - 26464262
Alignment:
| Q |
365 |
atcaaatcacttaagatatatttataagtcacacacactactatcaaatagaaggtgttgactcatcttaatgac |
439 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||||| |||| |||||||||| |
|
|
| T |
26464334 |
atcaaattacttaagatctatttataagtcacacat--tactattaaatagaaggtgtttactcgtcttaatgac |
26464262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 104 - 500
Target Start/End: Original strand, 5910953 - 5911344
Alignment:
| Q |
104 |
aagtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaatt-ataaattagatactaaaagtgtacct |
202 |
Q |
| |
|
||||||||| |||||||||||||||| || | |||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5910953 |
aagtaaaaatagtgttcaaaacacatgcaacggaataaagtttggatctattttgcgtataaattataaaatttataaattagatactaaaagtgtacct |
5911052 |
T |
|
| Q |
203 |
ttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtgg |
302 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5911053 |
ttgtatcaattcttgaagcatgaaaa-ttcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttaagtagtgg |
5911151 |
T |
|
| Q |
303 |
aact--agaaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacacac |
400 |
Q |
| |
|
|||| | ||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||| ||||||||| |
|
|
| T |
5911152 |
aactaaaaaaaactagagcatatttctattttgtattcttgttgttgtgttgta---tgttgtgatcaaatcacttaaggtctatttataggtcacacac |
5911248 |
T |
|
| Q |
401 |
actactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatgctaattt |
499 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| ||||| | ||||||| |||||||| |||||| ||||||||| |||||||||||||||| |
|
|
| T |
5911249 |
actactatcaaatagaatgtgttgactcatcttaatgac-ctttt-atttcatatggtcaatca--ataaaaa-caattaacacatgttaatgctaattt |
5911343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 102 - 500
Target Start/End: Original strand, 35417117 - 35417510
Alignment:
| Q |
102 |
tgaagtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaatt-ataaattagatactaaaagtgtac |
200 |
Q |
| |
|
||||||||||| |||||||||||||||| || | |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
35417117 |
tgaagtaaaaatagtgttcaaaacacatgcaacggaataaagtttggatctattttgcgcataaattataaaatttataaattagatactaaaagtgtac |
35417216 |
T |
|
| Q |
201 |
ctttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35417217 |
ctttgtatcaattcttgaagcatgaaaa-ttcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagt |
35417315 |
T |
|
| Q |
301 |
ggaact--agaaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacac |
398 |
Q |
| |
|
|||||| | ||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| | |||||||| |||||| |
|
|
| T |
35417316 |
ggaactaaaaaaaactagagcatatttctattttgtattcttgttgttgtgttgt---gtgttttgatcaaatcacttaaggtctatttatagatcacac |
35417412 |
T |
|
| Q |
399 |
acactactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatgctaat |
497 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| ||| | ||||||| |||||||| |||||| ||||||||| |||||||||||||| |
|
|
| T |
35417413 |
acactactatcaaatagaatgtgttgactcatcttaatgaccattt--atttcatatggtcaatca--ataaaaa-caattaacacatgttaatgctaat |
35417507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 102 - 507
Target Start/End: Complemental strand, 38486639 - 38486253
Alignment:
| Q |
102 |
tgaagtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaattataaattagatactaaaagtgtacc |
201 |
Q |
| |
|
|||||||||| |||||||| ||||||| || | ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
38486639 |
tgaagtaaaactagtgttcataacacatgcaacggaataaagtttggatctattttgcgcttaaattataaaattgtaaattagatactaaaagtgtacc |
38486540 |
T |
|
| Q |
202 |
tttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtg |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38486539 |
tttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtg |
38486440 |
T |
|
| Q |
302 |
gaactagaaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacacaca |
401 |
Q |
| |
|
||||| ||||||||| ||||| ||||||||||| |||||| |||||||||||| |||| |||||||| |||||||||| |
|
|
| T |
38486439 |
gaactgaaaaactagagcatat------------ttcttgttgttgtgttgt-------tttgatcaaatcacttgagatctatttataggtcacacaca |
38486359 |
T |
|
| Q |
402 |
ctactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatgctaattta |
500 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||||||| || ||| |||||||||||||||||||||||||||| |
|
|
| T |
38486358 |
ttactatcaaatagaatgtgttgactcatcttagtgattcttttaaattcatatggtcaatcattgt-aaatgcaattaacatatgttaatgctaattta |
38486260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 104 - 500
Target Start/End: Complemental strand, 6751526 - 6751135
Alignment:
| Q |
104 |
aagtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaatt-ataaattagatactaaaagtgtacct |
202 |
Q |
| |
|
||||||||| |||||||||||||||| || | |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
6751526 |
aagtaaaaatagtgttcaaaacacatgcaacggaataaagtttggatctattttgcgcataaattataaaatttataaattagatactaaaagtgtacct |
6751427 |
T |
|
| Q |
203 |
ttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtgg |
302 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6751426 |
ttgtatcaattcttgaagcatgaaaa-ttcttcaatgatataaagactctatgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtgg |
6751328 |
T |
|
| Q |
303 |
aact--agaaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacacac |
400 |
Q |
| |
|
|||| | ||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||||||| | |||||||| ||||||||| |
|
|
| T |
6751327 |
aactaaaaaaaactagagcatatttttattttgtattcttgttgttgtgttgt---gtgttgtgatcaaatcacttaaggtctatttataggtcacacac |
6751231 |
T |
|
| Q |
401 |
actactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatgctaattt |
499 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| ||||| | ||||||| |||||||| |||||| ||||||||| |||||||||||||||| |
|
|
| T |
6751230 |
actactatcaaatagaatgtgttgactcatcttaatgac-ctttt-atttcatatggtcaatca--ataaaaa-caattaacacatgttaatgctaattt |
6751136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 104 - 500
Target Start/End: Original strand, 5917901 - 5918292
Alignment:
| Q |
104 |
aagtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaatt-ataaattagatactaaaagtgtacct |
202 |
Q |
| |
|
||||||||| |||||||||||||||| || | ||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| | |
|
|
| T |
5917901 |
aagtaaaaatagtgttcaaaacacatgcaacggaataaagtttggatctattttgcatataaattataaaatttataaattagatactaaaagtgtactt |
5918000 |
T |
|
| Q |
203 |
ttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtgg |
302 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5918001 |
ttgtatcaattcttgaagcatgaaaa-ttcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtgg |
5918099 |
T |
|
| Q |
303 |
aact--agaaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacacac |
400 |
Q |
| |
|
|||| | ||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | |||||||| ||||||||| |
|
|
| T |
5918100 |
aactaaaaaaaactagagcatatttctattttgtattcttgttgttgtgttgta---tgttgtgatcaaattacttaaggtctatttataggtcacacac |
5918196 |
T |
|
| Q |
401 |
actactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatgctaattt |
499 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| ||||| | ||||||| |||||||| |||||| ||||||||| |||||||||||||||| |
|
|
| T |
5918197 |
actactatcaaatagaatgtgttgactcatcttaatgac-ctttt-atttcatatggtcaatca--ataaaaa-caattaacacatgttaatgctaattt |
5918291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 100 - 439
Target Start/End: Original strand, 36100058 - 36100390
Alignment:
| Q |
100 |
tctgaagtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaattataaattagatactaaaagtgta |
199 |
Q |
| |
|
||||||||||||| |||||||| ||||||| || | |||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
36100058 |
tctgaagtaaaaatagtgttcataacacatgcaacggaataaagtttggatctattttgcgcataaattataaa-ttataaattaaatactaaaagtgta |
36100156 |
T |
|
| Q |
200 |
cctttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtag |
299 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36100157 |
cctttgtatcaattcttgaagcatgaaaa-ttcttcaatgatatgaagactctacatgtatccacaccgagaccaattcttaccctcaacctttgagtag |
36100255 |
T |
|
| Q |
300 |
tggaactagaaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacaca |
399 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | |||||||| | |||| |
|
|
| T |
36100256 |
tggaactagaaaactagaacatatttctattttgtattcttgttgttgtgttgtgtgttgtgcc---caaatcacttaaggtctatttatagat--caca |
36100350 |
T |
|
| Q |
400 |
cactactatcaaatagaaggtgttgactcatcttaatgac |
439 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
36100351 |
cactactatcaaatagaatgtgttgactcatcttaatgac |
36100390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 104 - 503
Target Start/End: Original strand, 41193931 - 41194323
Alignment:
| Q |
104 |
aagtaaaaacagtgttca-aaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaattataaattagatactaaaagtgtacct |
202 |
Q |
| |
|
||||||||| |||||||| |||||||| ||| | ||||||||||||||||||||||| | |||| |||||||||||||||| |||| ||||||||| | | |
|
|
| T |
41193931 |
aagtaaaaatagtgttcataaacacatgtaacggaataaagtttggatctattttgcacttaaattataaaattataaatttgatattaaaagtgtgcat |
41194030 |
T |
|
| Q |
203 |
ttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtgg |
302 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| || ||| ||||||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
41194031 |
ttgtatcaattcttaaagcatgaaaaattctttaaagatgtgaagactctaagtgtatctacaccgagatcaattcttactctcaacctttgagtagtgg |
41194130 |
T |
|
| Q |
303 |
aactag-aaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacacaca |
401 |
Q |
| |
|
||| || ||||||||| ||||||| | ||||||||| ||| |||| || ||| ||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
41194131 |
aacaagaaaaactagagcatatttatgttttgtattgttg-tgttgtg-tgt-------cgtgatcaaatcacttaaggtttatttataagtcacacaca |
41194221 |
T |
|
| Q |
402 |
ctactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatatg-tcaatcatcgtaaaaagcaattaacatatgttaatgctaattta |
500 |
Q |
| |
|
|| ||||||||| |||| |||||| ||||||||||| ||||||| |||||||| |||||||| ||||||||||||||||||| |||||| ||||||| |
|
|
| T |
41194222 |
ctctcatcaaataggaggtattgactaatcttaatgac-cttttaatttcatatgatcaatcatgataaaaagcaattaacatatcttaatgttaattta |
41194320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 368 - 491
Target Start/End: Original strand, 36361859 - 36361982
Alignment:
| Q |
368 |
aaatcacttaagatatatttataagtcacacacactactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcg |
466 |
Q |
| |
|
|||| ||||||||| |||||||||| |||||||||||| ||||||||| | |||||||||||||||||||| ||||||| ||||||| || ||| || |
|
|
| T |
36361859 |
aaattacttaagatctatttataagccacacacactaccatcaaataggaagtgttgactcatcttaatga-tcttttactttcatatggttaattataa |
36361957 |
T |
|
| Q |
467 |
taaaaagcaattaacatatgttaat |
491 |
Q |
| |
|
| |||||||||||||| |||||||| |
|
|
| T |
36361958 |
tgaaaagcaattaacacatgttaat |
36361982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 333
Target Start/End: Original strand, 36361749 - 36361832
Alignment:
| Q |
250 |
tctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtggaactagaaaactagaacatatttctattttg |
333 |
Q |
| |
|
||||||||||| ||| | ||||| ||||||||||||| ||| ||||||||||| |||||||| ||||| |||| ||||||| |
|
|
| T |
36361749 |
tctacgtgtatttacatccagacccgttcttaccctcaatttttaagtagtggaacaagaaaacttgaacaaatttatattttg |
36361832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 102 - 507
Target Start/End: Original strand, 16860177 - 16860563
Alignment:
| Q |
102 |
tgaagtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaattataaattagatactaaaagtgtacc |
201 |
Q |
| |
|
|||||||||| |||||||| ||||||| || | ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
16860177 |
tgaagtaaaactagtgttcataacacatgcaacggaataaagtttggatctattttgcgcttaaattataaaattgtaaattagatactaaaagtgtacc |
16860276 |
T |
|
| Q |
202 |
tttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtg |
301 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
16860277 |
tttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttacgctcaacctttgagtagtg |
16860376 |
T |
|
| Q |
302 |
gaactagaaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacacaca |
401 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||| |||||| ||||||||| ||||| | |||||||| |||||||||| |
|
|
| T |
16860377 |
gaactagaaaactagagcatat------------ttcttgttgttgtgttgt-------tttgatcaaatcatttaaggtctatttataggtcacacaca |
16860457 |
T |
|
| Q |
402 |
ctactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaatgctaattta |
500 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||| ||| |||||||||||||||| ||||||||| || ||| |||||||||||||||||||||||||||| |
|
|
| T |
16860458 |
ctactatcaaatagaatgtgttaactcatcttagtgattcttttaaattcatatggtcaatcattgt-aaatgcaattaacatatgttaatgctaattta |
16860556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 137 - 287
Target Start/End: Complemental strand, 19406248 - 19406099
Alignment:
| Q |
137 |
aataaagtttggatctattttgcgcataaactataaaattataaattagatactaaaagtgtacctttgtatcaattcttgaagcatgaaaaattcttca |
236 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19406248 |
aataaagtttggatctattttgcgcttaaattataaa-ttataaattagatactaaaagtgtacctttgtatcaattcttgaagcatgaaaaattcttca |
19406150 |
T |
|
| Q |
237 |
atgatatgaagactctacgtgtatccacaccgagaccaattcttaccctca |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19406149 |
atgatatgaagactctacgtgtatccacaccgagaccaattcttaccctca |
19406099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 174 - 437
Target Start/End: Complemental strand, 40772506 - 40772252
Alignment:
| Q |
174 |
attataaattagatactaaaagtgtacctttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagacc |
273 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||| |
|
|
| T |
40772506 |
attataaattagatactaaaagtgtacctttgtatcaattcttgaagcatgagaaattcttcaaagatgtgaagactctacgtgtatccacac--tgacc |
40772409 |
T |
|
| Q |
274 |
aattcttaccctcaacctttgagtagtggaactagaaaactagaacatatttctattttgtattcttgt-tgttatgttgtannnnnnnnnnatcaaatc |
372 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | ||||||||| ||| ||| | ||||||||| |||| |||| | |||| |||||||| |
|
|
| T |
40772408 |
aattcttaccctcaacctttgagtagtggaacaataaaactagagcatgtttatgttttgtattgttgtgtgttgtattgt----------gatcaaatc |
40772319 |
T |
|
| Q |
373 |
acttaaga--tatatttataagtcacacacactactatcaaatagaaggtgttgactcatcttaatg |
437 |
Q |
| |
|
|||||||| | ||||||||||| ||||||||||| ||||||||| ||||||||||||||| ||||| |
|
|
| T |
40772318 |
acttaagatctctatttataagttacacacactacaatcaaataggaggtgttgactcatcataatg |
40772252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 117 - 433
Target Start/End: Original strand, 26337609 - 26337912
Alignment:
| Q |
117 |
gttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaa-ttataaattagatactaaaagtgtacctttgtatcaattct |
215 |
Q |
| |
|
||||| |||||||| || | ||| |||||| ||| ||||||||| |||| ||||||| ||||| || |||||| |||||| ||||||||||| || ||| |
|
|
| T |
26337609 |
gttcataacacatccaacggaatgaagtttagatttattttgcgtttaaattataaaaattatagat-agatacaaaaagtatacctttgtataaactct |
26337707 |
T |
|
| Q |
216 |
tgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtggaactagaaaacta |
315 |
Q |
| |
|
||||||| |||||| ||||| ||| |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| | |
|
|
| T |
26337708 |
tgaagcacgaaaaaaaattcaaagatgtgaagactctactggtatccacaccgagaccaattcttaacctcaacctttaagtagtggaacaagaaaacaa |
26337807 |
T |
|
| Q |
316 |
gaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcacttaagatatatttataagtcacacacactactatcaaatag |
415 |
Q |
| |
|
|||||||||| | ||||||||| |||||| | |||||| |||||||||||||| | ||||||||||| |||||||||| ||||||||| |
|
|
| T |
26337808 |
gaacatatttgtgttttgtatttttgttg-tgtgttgt----------gatcaaatcacttaaagtctatttataagt--cacacactacaatcaaatag |
26337894 |
T |
|
| Q |
416 |
aaggtgttgactcatctt |
433 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
26337895 |
gaggtgttgactcatctt |
26337912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 393 - 509
Target Start/End: Complemental strand, 19406101 - 19405987
Alignment:
| Q |
393 |
tcacacacactactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagcaattaacatatgttaat |
491 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||| |||||||| |||||| || |||| |||||| || ||||| ||||||||| | | |||||| |
|
|
| T |
19406101 |
tcacacacattactatcaaatagaa--agttgactcattttaatgacctttttaattttatatggtcaattattgtaaagagcaattaataaaggttaat |
19406004 |
T |
|
| Q |
492 |
gctaatttacttaaaaga |
509 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
19406003 |
gctaa-ttacttaaaaga |
19405987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 40772960 - 40772888
Alignment:
| Q |
102 |
tgaagtaaaaacagtgttcaaaacacatctaaggaaataaagtttggatctattttgcgcataaactataaaa |
174 |
Q |
| |
|
|||||| |||| |||||||| ||||||| || ||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
40772960 |
tgaagttaaaatagtgttcacaacacatgcaacagaataaagtttggatctattttgcgcttaaattataaaa |
40772888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 149; Significance: 2e-78; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 177 - 480
Target Start/End: Original strand, 47018578 - 47018871
Alignment:
| Q |
177 |
ataaattagatactaaaagtgtacctttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaat |
276 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| |
|
|
| T |
47018578 |
ataaattagatactaaaa------ctttgtattaattcttgaagcatgaaaaattcttcaatgatatgaagactttaggtgtatccacaccgagatcaat |
47018671 |
T |
|
| Q |
277 |
tcttaccctcaacctttgagtagtggaactagaaaactagaacatatttctattttgtattcttgttgttatgttgtannnnnnnnnnatcaaatcactt |
376 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
47018672 |
tcttaccctcaacctttgagtagtggaactagaaaactagagcatatttctattttgtattcttgttgttatgttgt---gtgttttgatcaaatcactt |
47018768 |
T |
|
| Q |
377 |
aagatatatttataagtcacacacactactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatcatcgtaaaaagca |
475 |
Q |
| |
|
||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| |||||| || |||| |||||| || ||||| |||| |
|
|
| T |
47018769 |
aaggcctatttaaaagatacacacactactatcaaatagaag--gttgactcatcttaatgatctttttaattttatatggtcaattattgtaaagagca |
47018866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 192 - 332
Target Start/End: Complemental strand, 24189732 - 24189596
Alignment:
| Q |
192 |
aaagtgtacctttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacct |
291 |
Q |
| |
|
|||||||| ||| |||||||||||||||||| ||||||||||| || ||| ||||||| | ||||||||||| ||||||||||||||| |||| || |
|
|
| T |
24189732 |
aaagtgtaacttcgtatcaattcttgaagcaggaaaaattctttaaagatgtgaagacaat----gtatccacaccaagaccaattcttaccttcaatct |
24189637 |
T |
|
| Q |
292 |
ttgagtagtggaactagaaaactagaacatatttctatttt |
332 |
Q |
| |
|
|||| ||||||||| ||||||||||| ||||||| |||||| |
|
|
| T |
24189636 |
ttgattagtggaacaagaaaactagagcatatttatatttt |
24189596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 137 - 334
Target Start/End: Complemental strand, 499856 - 499661
Alignment:
| Q |
137 |
aataaagtttggatctattttgcgcataaactataaaat-tataaattagatactaaaagtgtacctttgtatcaa-ttcttgaagcatgaaaaattctt |
234 |
Q |
| |
|
||||| |||||||| |||||||||| |||| ||||||| |||| ||| ||||||||||||||| ||| ||| || ||||| |||||||||||||||| |
|
|
| T |
499856 |
aataatgtttggatatattttgcgcttaaattataaaaactatat-ttaaatactaaaagtgtac-tttctattaaattcttaaagcatgaaaaattcta |
499759 |
T |
|
| Q |
235 |
caatgatatgaagactctacgtgtatccacaccgagaccaattcttaccctcaacctttgagtagtggaactagaaaactagaacatatttctattttgt |
334 |
Q |
| |
|
|| ||||||||||||||||| |||| |||| |||||| ||||||| ||||||||||||||| |||||| |||||||| | ||||||| |||||||| |
|
|
| T |
499758 |
taaaaatatgaagactctacgtatatctacactaagaccagttcttacactcaacctttgagtaatggaacaagaaaacttg--catatttgtattttgt |
499661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 182 - 337
Target Start/End: Original strand, 39510286 - 39510441
Alignment:
| Q |
182 |
ttagatactaaaagtgtacctttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacaccgagaccaattctta |
281 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||| || || ||||| || | |||||| |||||||||||||| ||| ||||||||||| |
|
|
| T |
39510286 |
ttagatatcaaaagtgtgtctttgtatcaattcttgaagcataaattttttttcaaaaatgtaaagactttacgtgtatccacatcgaaaccaattctta |
39510385 |
T |
|
| Q |
282 |
ccctcaacctttgagtagtggaactagaaaactagaacatatttctattttgtatt |
337 |
Q |
| |
|
| |||||||||||||| | |||| | ||||||||| |||| || ||||||||||| |
|
|
| T |
39510386 |
cattcaacctttgagtattagaacaaaaaaactagagcataattgtattttgtatt |
39510441 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 169 - 488
Target Start/End: Complemental strand, 20471689 - 20471371
Alignment:
| Q |
169 |
ataaaattataaatt-agatactaaaagtgtacctttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacacc |
267 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | || ||||||||||||||||||||||||||||| |
|
|
| T |
20471689 |
ataaaattataaatttagatattaaaagtgtacctttgtatcaattcttgaagcat-aaaaattcattaaagatatgaagactctacgtgtatccacacc |
20471591 |
T |
|
| Q |
268 |
gagaccaattc---ttaccctcaacctttgagtagtggaactagaaaactagaacatatttctattttgtattcttgttgtt-atgttgtannnnnnnnn |
363 |
Q |
| |
|
| ||||||||| |||| ||||||||||||| |||||||| ||||||||||| ||||||| | ||| ||||| |||||||| |||||| |
|
|
| T |
20471590 |
gtgaccaattcttattactctcaacctttgagcagtggaacaagaaaactagagcatatttgtgtttagtatt-ttgttgttgttgttgtgttccccctt |
20471492 |
T |
|
| Q |
364 |
natcaaatcacttaagatatatttataagtcacacacactactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatc |
462 |
Q |
| |
|
|| |||| ||||||| | || |||||||||||||| ||||||||||||||| || || |||||||||||||| |||||||| ||||| | ||||||| |
|
|
| T |
20471491 |
gattaaattacttaaggtctacttataagtcacaca---tactatcaaatagaaagtatt-actcatcttaatga-tcttttaatttcatttggtcaatc |
20471397 |
T |
|
| Q |
463 |
atcgtaaaaagcaattaacatatgtt |
488 |
Q |
| |
|
|| |||||||||||||||||||||| |
|
|
| T |
20471396 |
attataaaaagcaattaacatatgtt |
20471371 |
T |
|
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Target: chr6 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 27225882 - 27225980
Alignment:
| Q |
1 |
cttgattccctttgtcccattgtatacctcttttatttgattcagttggttcaatgaaaacgtgattgaaatagaattacaactctatcacatatgaag |
99 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27225882 |
cttgattccctttgtcccattgtatatctcttttatttgattcagttggttcaatgaaaacgtgattgaaatagaattacaactctatcacatatgaag |
27225980 |
T |
|
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Target: chr8 (Bit Score: 84; Significance: 1e-39; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 169 - 317
Target Start/End: Complemental strand, 21593571 - 21593429
Alignment:
| Q |
169 |
ataaaattataaatt-agatactaaaagtgtacctttgtatcaattcttgaagcatgaaaaattcttcaatgatatgaagactctacgtgtatccacacc |
267 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||||||| |||||||||||| ||| |||||| |
|
|
| T |
21593571 |
ataaaattataaatttagatactaaaagtgtacctctatatcaattcttgaagcataaaaaattcttcaaagatatgaagact-------tatacacacc |
21593479 |
T |
|
| Q |
268 |
gagaccaattcttaccctcaacctttgagtagtggaactagaaaactaga |
317 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||| ||||||||||| |
|
|
| T |
21593478 |
gagaccaattcttactctcaacctttgagtattggaacaagaaaactaga |
21593429 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 365 - 500
Target Start/End: Original strand, 28967961 - 28968094
Alignment:
| Q |
365 |
atcaaatcacttaagatatatttataagtcacacacactactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatat-gtcaatca |
463 |
Q |
| |
|
||||||| | ||||||| || |||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||| || |||| ||||||| |
|
|
| T |
28967961 |
atcaaattagttaagatctacttataagtcacacat--tactatcaaatagaaggtgttgactcatcttagtgac-cttttaattttatatggtcaatcc |
28968057 |
T |
|
| Q |
464 |
tcgtaaaaagcaattaacatatgttaatgctaattta |
500 |
Q |
| |
|
| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
28968058 |
ttttaaaaagcaattaacatatgataatgctaattta |
28968094 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 365 - 456
Target Start/End: Complemental strand, 21593405 - 21593315
Alignment:
| Q |
365 |
atcaaatcacttaagatatatttataagtcacacacactactatcaaatagaaggtgttgactcatcttaatgactcttttaaattcatatg |
456 |
Q |
| |
|
||||||| ||||||| | ||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||||| |
|
|
| T |
21593405 |
atcaaattacttaaggtctatttataagtcatacacactactatcaaatagaaagtgttgactcatctaaatgac-attttaatttcatatg |
21593315 |
T |
|
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