View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13199_low_18 (Length: 297)

Name: NF13199_low_18
Description: NF13199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13199_low_18
NF13199_low_18
[»] chr5 (25 HSPs)
chr5 (53-287)||(42893434-42893668)
chr5 (227-293)||(42893896-42893962)
chr5 (226-287)||(42893703-42893764)
chr5 (226-287)||(42893991-42894052)
chr5 (226-283)||(42893799-42893856)
chr5 (53-99)||(19820327-19820373)
chr5 (235-287)||(42894066-42894118)
chr5 (56-98)||(14873599-14873641)
chr5 (53-98)||(39698626-39698671)
chr5 (26-98)||(28588614-28588685)
chr5 (53-96)||(21190998-21191041)
chr5 (55-98)||(21576685-21576728)
chr5 (53-87)||(17088365-17088399)
chr5 (60-98)||(17123128-17123166)
chr5 (53-99)||(32766871-32766917)
chr5 (60-98)||(35017124-35017162)
chr5 (53-95)||(39268541-39268583)
chr5 (53-98)||(7677790-7677835)
chr5 (53-86)||(15382559-15382592)
chr5 (62-99)||(22423763-22423800)
chr5 (53-102)||(31084402-31084451)
chr5 (53-98)||(38464313-38464358)
chr5 (53-98)||(43564955-43565000)
chr5 (62-98)||(10298633-10298669)
chr5 (56-96)||(43001882-43001922)
[»] chr3 (27 HSPs)
chr3 (141-287)||(7228179-7228325)
chr3 (23-98)||(40993275-40993349)
chr3 (53-99)||(11610583-11610629)
chr3 (53-98)||(34185052-34185097)
chr3 (55-99)||(20503541-20503585)
chr3 (57-99)||(3730107-3730149)
chr3 (53-98)||(3163971-3164016)
chr3 (54-99)||(14829776-14829821)
chr3 (53-98)||(27505325-27505370)
chr3 (53-98)||(40052386-40052431)
chr3 (53-98)||(55401149-55401194)
chr3 (54-98)||(2408590-2408634)
chr3 (53-96)||(4987222-4987265)
chr3 (23-97)||(8789489-8789564)
chr3 (55-98)||(14979225-14979268)
chr3 (57-99)||(18427027-18427069)
chr3 (55-97)||(34910393-34910435)
chr3 (48-98)||(49651716-49651766)
chr3 (53-98)||(16789585-16789630)
chr3 (36-101)||(24204978-24205043)
chr3 (53-98)||(41961579-41961624)
chr3 (53-93)||(1509641-1509681)
chr3 (62-98)||(4990912-4990948)
chr3 (63-99)||(8842413-8842449)
chr3 (54-98)||(11658871-11658915)
chr3 (53-97)||(15999951-15999995)
chr3 (26-98)||(52369834-52369906)
[»] chr8 (20 HSPs)
chr8 (9-98)||(17751686-17751775)
chr8 (9-98)||(17760673-17760762)
chr8 (26-98)||(29510233-29510304)
chr8 (53-98)||(15816058-15816103)
chr8 (53-98)||(22652061-22652106)
chr8 (53-96)||(20679337-20679380)
chr8 (61-104)||(26902098-26902141)
chr8 (24-98)||(949205-949278)
chr8 (44-98)||(4673354-4673408)
chr8 (53-99)||(29447529-29447575)
chr8 (53-94)||(5813666-5813707)
chr8 (53-98)||(8343041-8343086)
chr8 (53-98)||(8343401-8343446)
chr8 (54-99)||(13436909-13436954)
chr8 (53-98)||(22197671-22197716)
chr8 (53-86)||(22943301-22943334)
chr8 (53-98)||(36450694-36450739)
chr8 (56-96)||(16987990-16988030)
chr8 (25-97)||(24205749-24205820)
chr8 (59-99)||(25566910-25566950)
[»] chr4 (32 HSPs)
chr4 (26-98)||(53381530-53381602)
chr4 (26-99)||(24343560-24343633)
chr4 (26-98)||(28964188-28964259)
chr4 (53-98)||(11596297-11596342)
chr4 (53-98)||(18513175-18513220)
chr4 (53-98)||(23292926-23292971)
chr4 (53-99)||(715544-715590)
chr4 (53-99)||(752870-752916)
chr4 (25-98)||(7012124-7012197)
chr4 (53-93)||(3712458-3712498)
chr4 (53-97)||(5922532-5922576)
chr4 (55-99)||(36635406-36635450)
chr4 (59-98)||(5775304-5775343)
chr4 (54-97)||(14465006-14465049)
chr4 (63-98)||(16073478-16073513)
chr4 (55-98)||(25950472-25950515)
chr4 (55-98)||(40784029-40784072)
chr4 (56-99)||(49431103-49431146)
chr4 (53-99)||(18966583-18966629)
chr4 (53-95)||(28084598-28084640)
chr4 (53-99)||(29205542-29205588)
chr4 (53-99)||(34306743-34306789)
chr4 (53-99)||(37203326-37203372)
chr4 (26-83)||(944617-944674)
chr4 (53-98)||(8423658-8423703)
chr4 (53-98)||(12895214-12895259)
chr4 (55-99)||(2361914-2361958)
chr4 (53-97)||(3947702-3947746)
chr4 (26-98)||(10133756-10133828)
chr4 (53-101)||(21945577-21945625)
chr4 (53-97)||(30982808-30982852)
chr4 (53-97)||(40965345-40965389)
[»] chr2 (21 HSPs)
chr2 (55-99)||(11223792-11223836)
chr2 (26-96)||(2438661-2438730)
chr2 (55-96)||(19942341-19942382)
chr2 (53-98)||(37419828-37419873)
chr2 (54-98)||(44635568-44635612)
chr2 (48-98)||(15907851-15907901)
chr2 (53-99)||(26769596-26769642)
chr2 (53-98)||(18840953-18840998)
chr2 (53-98)||(38117099-38117144)
chr2 (62-98)||(19536361-19536397)
chr2 (53-96)||(15657949-15657992)
chr2 (56-98)||(21782744-21782786)
chr2 (64-98)||(35056964-35056998)
chr2 (53-99)||(37559051-37559097)
chr2 (57-98)||(39323316-39323357)
chr2 (53-98)||(42511322-42511367)
chr2 (54-98)||(3414928-3414972)
chr2 (23-75)||(5367237-5367288)
chr2 (55-99)||(10535684-10535728)
chr2 (53-93)||(23058389-23058429)
chr2 (60-96)||(23354926-23354962)
[»] chr1 (34 HSPs)
chr1 (26-98)||(22515827-22515898)
chr1 (26-98)||(31694639-31694710)
chr1 (39-98)||(16812616-16812675)
chr1 (55-98)||(27965940-27965983)
chr1 (53-99)||(17831461-17831507)
chr1 (25-99)||(32899937-32900011)
chr1 (53-98)||(6427549-6427594)
chr1 (53-98)||(38075909-38075954)
chr1 (53-97)||(40258874-40258918)
chr1 (53-96)||(42359391-42359434)
chr1 (56-98)||(113370-113412)
chr1 (53-99)||(1704934-1704980)
chr1 (53-103)||(2218302-2218352)
chr1 (53-98)||(1815331-1815376)
chr1 (26-99)||(5944342-5944414)
chr1 (26-99)||(6936333-6936406)
chr1 (53-98)||(9828129-9828174)
chr1 (53-98)||(21365992-21366037)
chr1 (53-98)||(40917834-40917879)
chr1 (54-98)||(22881567-22881611)
chr1 (54-98)||(30359440-30359484)
chr1 (26-98)||(47989556-47989627)
chr1 (53-96)||(1486646-1486689)
chr1 (38-97)||(2445932-2445991)
chr1 (53-96)||(16297223-16297266)
chr1 (55-98)||(22947806-22947849)
chr1 (53-98)||(18556385-18556430)
chr1 (53-98)||(29144320-29144365)
chr1 (61-98)||(35702542-35702579)
chr1 (61-98)||(37598913-37598950)
chr1 (53-98)||(46940748-46940793)
chr1 (53-97)||(10233330-10233374)
chr1 (54-98)||(31511909-31511953)
chr1 (54-98)||(36878541-36878585)
[»] chr7 (19 HSPs)
chr7 (53-98)||(1401097-1401142)
chr7 (53-98)||(5409771-5409816)
chr7 (25-98)||(7133212-7133285)
chr7 (26-99)||(24339701-24339773)
chr7 (26-101)||(21880200-21880274)
chr7 (53-87)||(18215148-18215182)
chr7 (53-98)||(598282-598327)
chr7 (53-98)||(6490790-6490835)
chr7 (53-98)||(9778579-9778624)
chr7 (53-98)||(43027404-43027449)
chr7 (53-97)||(32287404-32287448)
chr7 (53-98)||(1433533-1433578)
chr7 (54-95)||(8842282-8842323)
chr7 (53-98)||(14729777-14729822)
chr7 (55-96)||(22868123-22868164)
chr7 (53-98)||(29763129-29763174)
chr7 (53-94)||(40287306-40287347)
chr7 (55-99)||(21568560-21568604)
chr7 (62-98)||(35862034-35862070)
[»] chr6 (30 HSPs)
chr6 (26-98)||(10339054-10339125)
chr6 (53-99)||(7378053-7378099)
chr6 (53-98)||(25207814-25207859)
chr6 (62-98)||(426478-426514)
chr6 (62-98)||(5732474-5732510)
chr6 (53-97)||(31959224-31959268)
chr6 (55-99)||(34595210-34595254)
chr6 (59-98)||(10770607-10770646)
chr6 (55-98)||(17327590-17327633)
chr6 (53-95)||(8389411-8389453)
chr6 (53-95)||(9025448-9025490)
chr6 (53-99)||(9107298-9107344)
chr6 (55-96)||(5569825-5569866)
chr6 (26-99)||(5970036-5970108)
chr6 (53-98)||(7248443-7248488)
chr6 (53-98)||(7938174-7938219)
chr6 (53-98)||(8365448-8365493)
chr6 (26-99)||(8714039-8714111)
chr6 (53-98)||(8776908-8776953)
chr6 (53-98)||(9629468-9629513)
chr6 (62-99)||(9911481-9911518)
chr6 (57-98)||(12236737-12236778)
chr6 (53-98)||(16766782-16766827)
chr6 (55-96)||(26178620-26178661)
chr6 (53-98)||(28152172-28152217)
chr6 (56-97)||(31385007-31385048)
chr6 (26-95)||(32978842-32978910)
chr6 (53-98)||(34894968-34895013)
chr6 (62-98)||(4878025-4878061)
chr6 (53-97)||(17841530-17841574)
[»] scaffold0652 (1 HSPs)
scaffold0652 (26-97)||(403-473)
[»] scaffold0793 (1 HSPs)
scaffold0793 (53-99)||(4820-4866)
[»] scaffold0053 (1 HSPs)
scaffold0053 (53-99)||(8872-8918)
[»] scaffold0003 (2 HSPs)
scaffold0003 (53-99)||(241679-241725)
scaffold0003 (55-98)||(236914-236957)
[»] scaffold0103 (1 HSPs)
scaffold0103 (56-97)||(51900-51941)
[»] scaffold0475 (1 HSPs)
scaffold0475 (55-98)||(3384-3427)
[»] scaffold0004 (1 HSPs)
scaffold0004 (55-97)||(92898-92940)
[»] scaffold0136 (1 HSPs)
scaffold0136 (53-98)||(3778-3823)
[»] scaffold0020 (1 HSPs)
scaffold0020 (53-98)||(135263-135308)
[»] scaffold0019 (1 HSPs)
scaffold0019 (53-98)||(71810-71855)
[»] scaffold0086 (1 HSPs)
scaffold0086 (54-98)||(3014-3058)


Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 53 - 287
Target Start/End: Original strand, 42893434 - 42893668
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatagagtagaagtaatcatgacagtaacgtaaaagataatgtaaattcaccttagccg 152  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42893434 ccgacaccaggacacgcctaatatgaggagtgtccatgcttcatagagtagaagtaatcatgacagtaacgtaaaggataatgtaaattcaccttagccg 42893533  T
Q  153 catgctttctcccagcaacatgtttgttatatgtatcttgaccaacgcacacaacattgcatgttgagcaaaccttaacagaatcaacctgtttctttgg 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42893534 catgctttctcccagcaacatgtttgttatatgtatcttgaccaacgcacacaacattgcatgttgagcaaaccttaacagaatcaacctgtttcttagg 42893633  T
Q  253 ctctgattgttcggctacaggaccaattaacgctt 287  Q
    |||||| ||||||||||||||||||||||||||||    
T  42893634 ctctgagtgttcggctacaggaccaattaacgctt 42893668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 42893896 - 42893962
Alignment:
Q  227 ttaacagaatcaacctgtttctttggctctgattgttcggctacaggaccaattaacgcttctccgt 293  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  42893896 ttaacagaatcaacctgtttcttaggctctgattgttcggctacaggaccaattaacgcttgtccgt 42893962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 42893703 - 42893764
Alignment:
Q  226 cttaacagaatcaacctgtttctttggctctgattgttcggctacaggaccaattaacgctt 287  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42893703 cttaacagaatcaacctgtttcttaggctctgattgttcggctacaggaccaattaacgctt 42893764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 42893991 - 42894052
Alignment:
Q  226 cttaacagaatcaacctgtttctttggctctgattgttcggctacaggaccaattaacgctt 287  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  42893991 cttaacagaatcaacctgtttcttaggctctgattgttcggccacaggaccaattaatgctt 42894052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 42893799 - 42893856
Alignment:
Q  226 cttaacagaatcaacctgtttctttggctctgattgttcggctacaggaccaattaac 283  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  42893799 cttaaaagaatcaacctgtttcttaggctctgagtgttcggctacaggaccaattaac 42893856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 19820373 - 19820327
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  19820373 ccgacaccgggacacgcctaatcagaggagtgtccgtgcttcataga 19820327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 42894066 - 42894118
Alignment:
Q  235 atcaacctgtttctttggctctgattgttcggctacaggaccaattaacgctt 287  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||||| ||||    
T  42894066 atcaacctgtttcttaggctctgattgctcgggtacaggaccaattaatgctt 42894118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 14873599 - 14873641
Alignment:
Q  56 acaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  14873599 acaccgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 39698626 - 39698671
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  39698626 ccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 28588685 - 28588614
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| ||||||| ||| |||| | |||||| |||||||| ||||| || |||||||||||||||||||    
T  28588685 gtgtcggtgtcggacac-gacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcatag 28588614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 21191041 - 21190998
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||    
T  21191041 ccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 21576728 - 21576685
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||    
T  21576728 gacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 17088365 - 17088399
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtcc 87  Q
    ||||||||||||||||||||||| |||||||||||    
T  17088365 ccgacaccgggacacgcctaatccgaggagtgtcc 17088399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 17123128 - 17123166
Alignment:
Q  60 cgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  17123128 cgggacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 32766917 - 32766871
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||||| ||| ||| |||||||||||||||||| |||||||||||    
T  32766917 ccgacaccaggatacgtctaatctgaggagtgtccgtgcttcataga 32766871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 35017124 - 35017162
Alignment:
Q  60 cgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  35017124 cgggacacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 39268583 - 39268541
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttca 95  Q
    ||||||| ||||||||||||||| ||||||||||| |||||||    
T  39268583 ccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 7677790 - 7677835
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| |||||| |||  ||||||||||    
T  7677790 ccgacaccgggacacgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 15382559 - 15382592
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtc 86  Q
    ||||||||||||||||||||||| ||||||||||    
T  15382559 ccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 22423800 - 22423763
Alignment:
Q  62 ggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  22423800 ggacacgcctaatccgaggagtgtccgtgcttcataga 22423763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 31084402 - 31084451
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatagagta 102  Q
    ||||||| |||||| |||||||| ||||||||||| || |||||||||||    
T  31084402 ccgacactgggacatgcctaatccgaggagtgtccgtggttcatagagta 31084451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 38464358 - 38464313
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||| ||||||| ||||||||||  ||||||||||    
T  38464358 ccgacaccgggacacacctaatccgaggagtgtctgtgcttcatag 38464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 43564955 - 43565000
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||| ||||||||||||||||| ||| ||||||| ||||||||||    
T  43564955 ccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatag 43565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 10298633 - 10298669
Alignment:
Q  62 ggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  10298633 ggacacgcctaatccgaggagtgtccgtgcttcatag 10298669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 43001882 - 43001922
Alignment:
Q  56 acaccgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    ||||| |||||||||||||| ||||||||||| ||||||||    
T  43001882 acacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 7228179 - 7228325
Alignment:
Q  141 tcaccttagccgcatgctttctcccagcaacatgtttgttatatgtatcttgaccaacgcacacaacattgcatgttgagcaaaccttaacagaatcaac 240  Q
    |||||| ||| || |||||||||||||||| ||||||| |||||| |||||||| |  ||||| ||||||||| |||||||||||| |  ||||||||||    
T  7228179 tcacctgagcagcgtgctttctcccagcaagatgtttgatatatgcatcttgactagtgcacaaaacattgcaagttgagcaaaccgttgcagaatcaac 7228278  T
Q  241 ctgtttctttggctctgattgttcggctacaggaccaattaacgctt 287  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||    
T  7228279 ctgtttcttaggctcggattgcttggctacaggaccaattaacgctt 7228325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 40993349 - 40993275
Alignment:
Q  23 tatgtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||| ||||||| ||| |||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  40993349 tatgtgtcggtgtcggacac-gacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 11610583 - 11610629
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||    
T  11610583 ccgacatcgggacacgcctaatctgaggagtgtccgtgcttcataga 11610629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 34185097 - 34185052
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  34185097 ccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 20503541 - 20503585
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  20503541 gacaccgggacacgcctaatccgaggagtgtccgtgcttcataga 20503585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 99
Target Start/End: Complemental strand, 3730149 - 3730107
Alignment:
Q  57 caccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||||| ||||||| |||||||||||||||||||||||    
T  3730149 caccgggacacacctaatccgaggagtgtccatgcttcataga 3730107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 3164016 - 3163971
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||||    
T  3164016 ccgacaccgagacacgcctaattcgaggagtgtccatgcttcatag 3163971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 99
Target Start/End: Original strand, 14829776 - 14829821
Alignment:
Q  54 cgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||||    
T  14829776 cgacaccgggacacgcctaatctgaggaatgtccgtgcttcgtaga 14829821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 27505325 - 27505370
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||| |||||||| ||||||||||| ||||||||||    
T  27505325 ccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 40052386 - 40052431
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||    
T  40052386 ccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatag 40052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 55401149 - 55401194
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  55401149 ccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 2408634 - 2408590
Alignment:
Q  54 cgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||||    
T  2408634 cgacaccgggacacgcctaatctaaggagtctccgtgcttcatag 2408590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 4987265 - 4987222
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||    
T  4987265 ccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 8789564 - 8789489
Alignment:
Q  23 tatgtgtcggtgacggacac-agacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    |||||||||||| ||||||| | || |||  | ||||||| ||||||||||||| ||||||||||| |||||||||    
T  8789564 tatgtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 14979225 - 14979268
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||    
T  14979225 gacaccgggacacgcctaacccgaggagtgtccgtgcttcatag 14979268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 18427027 - 18427069
Alignment:
Q  57 caccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||||| ||||||||||||||||||| || ||||||||    
T  18427027 caccgggacacacctaatctgaggagtgtccgtgtttcataga 18427069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 34910393 - 34910435
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    |||||||||||||| |||||| ||||||||||| |||||||||    
T  34910393 gacaccgggacacgtctaatccgaggagtgtccgtgcttcata 34910435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 49651766 - 49651716
Alignment:
Q  48 catagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||| ||||||||||||||| ||||||| ||| ||||||| ||||||||||    
T  49651766 catatccgacaccgggacacacctaatccgagaagtgtccgtgcttcatag 49651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 16789630 - 16789585
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||| |||||||| |||||||  |||||||||||||||||||||    
T  16789630 ccgacaacgggacacacctaatcctaggagtgtccatgcttcatag 16789585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 24205043 - 24204978
Alignment:
Q  36 cggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatagagt 101  Q
    ||||||| ||||| |  |||||||| |||||||||||||  ||||||||||| |||||||| ||||    
T  24205043 cggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcattgagt 24204978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 41961624 - 41961579
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||| ||||||||||||||| ||| ||||||| ||||||||||    
T  41961624 ccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 1509641 - 1509681
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgctt 93  Q
    |||||||||| |||||||||||| ||||||||||| |||||    
T  1509641 ccgacaccggtacacgcctaatcggaggagtgtccgtgctt 1509681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 4990948 - 4990912
Alignment:
Q  62 ggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  4990948 ggacacgcctaatccgaggagtgtccgtgcttcatag 4990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 8842413 - 8842449
Alignment:
Q  63 gacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  8842413 gacacgcctaatccgaggagtgtccgtgcttcataga 8842449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 11658871 - 11658915
Alignment:
Q  54 cgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||| |||||  ||||||||||||| ||||||||    
T  11658871 cgacaccgggacacgtctaattcgaggagtgtccatacttcatag 11658915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 15999995 - 15999951
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    |||||||||||||||||||||||  |||||||||| ||| |||||    
T  15999995 ccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 52369834 - 52369906
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||  ||||||| ||||| |  || |||||||||||| |||| || ||||||||||| ||||||||||    
T  52369834 gtgtcggtatcggacaccgacgcgtgtccaacaccgggacacacctattccgaggagtgtccgtgcttcatag 52369906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 17751686 - 17751775
Alignment:
Q  9 taatttgagaaaattatgtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  17751686 taatttcagaaaattatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17751775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 17760673 - 17760762
Alignment:
Q  9 taatttgagaaaattatgtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  17760673 taatttcagaaaattatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17760762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 29510304 - 29510233
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| ||||||| ||||| |  ||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  29510304 gtgtcggtgtcggacac-gacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 15816103 - 15816058
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| ||| ||||||| ||||||||||    
T  15816103 ccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 22652061 - 22652106
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||    
T  22652061 ccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 20679380 - 20679337
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    ||||||||||||||||||| | | ||||||||||||||||||||    
T  20679380 ccgacaccgggacacgccttaaccgaggagtgtccatgcttcat 20679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 26902141 - 26902098
Alignment:
Q  61 gggacacgcctaatctgaggagtgtccatgcttcatagagtaga 104  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  26902141 gggacacgccttatctgaggagtgtccgtgcttcatagactaga 26902098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 949278 - 949205
Alignment:
Q  24 atgtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||| |||| || ||| |||| ||||||||| ||||| ||||||||||||| ||| | ||||||||||    
T  949278 atgtgtcggtgccggatac-gacacatatccgacaccgagacactcctaatctgaggaatgttcgtgcttcatag 949205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 4673408 - 4673354
Alignment:
Q  44 gacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||| |||||||||| ||||||||||||  |||||||||  ||||||||||    
T  4673408 gacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcatag 4673354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 29447529 - 29447575
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||||||||||| | |||||| ||||||||||| |||||||||||    
T  29447529 ccgacaccgggacaggtctaatcggaggagtgtccgtgcttcataga 29447575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 94
Target Start/End: Original strand, 5813666 - 5813707
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttc 94  Q
    ||||||||||||||||||||||  ||||||||||| ||||||    
T  5813666 ccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 8343041 - 8343086
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| || |||||||  ||||||||||    
T  8343041 ccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 8343401 - 8343446
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| || |||||||  ||||||||||    
T  8343401 ccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 13436954 - 13436909
Alignment:
Q  54 cgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||||||||||||||||  |||||||||  |||||||||||    
T  13436954 cgacaccgggacacgcctaatccaaggagtgtctgtgcttcataga 13436909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 22197716 - 22197671
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||  ||||||||||||||||||||||| ||||| ||||    
T  22197716 ccgacaccggatcacgcctaatctgaggagtgtccgtgctttatag 22197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 22943334 - 22943301
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtc 86  Q
    ||||||||||||||||||||||| ||||||||||    
T  22943334 ccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 36450739 - 36450694
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||| |||||||||||||| ||||||||||  ||||||||||    
T  36450739 ccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 16987990 - 16988030
Alignment:
Q  56 acaccgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    |||||||||||| ||||||| ||||||||||| ||||||||    
T  16987990 acaccgggacacccctaatccgaggagtgtccgtgcttcat 16988030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 24205820 - 24205749
Alignment:
Q  25 tgtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    |||||||||| || ||||| ||||||  | |||||||| |||||||||||| ||||||||||| || ||||||    
T  24205820 tgtgtcggtgtcgaacaca-acgcatgtctgacaccggaacacgcctaatccgaggagtgtccgtgtttcata 24205749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 25566910 - 25566950
Alignment:
Q  59 ccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||||||||||| ||||||||||  |||||||||||    
T  25566910 ccgggacacgcctaatccgaggagtgtctgtgcttcataga 25566950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 53381602 - 53381530
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| ||||||| ||||| || ||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  53381602 gtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 53381530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 24343560 - 24343633
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||| | ||||| ||||| |  |||||||||||||||||||| |||||||||||||| |||||||||||    
T  24343560 gtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcataga 24343633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 28964259 - 28964188
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||| ||| ||||||| ||| |||| ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  28964259 gtgtctgtgtcggacac-gacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 11596342 - 11596297
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||    
T  11596342 ccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 18513220 - 18513175
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||    
T  18513220 ccgacaccaggacacgcctaatctgaggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 23292971 - 23292926
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  23292971 ccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 715590 - 715544
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  715590 ccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 715544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 752916 - 752870
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  752916 ccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 752870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 7012124 - 7012197
Alignment:
Q  25 tgtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||| ||||||| ||||| || |||||||||||  || ||||||  ||||||||||| ||||||||||    
T  7012124 tgtgtcggtgtcggacaccgacgcgtatccgacaccggggaacacctaatgcgaggagtgtccgtgcttcatag 7012197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 3712498 - 3712458
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgctt 93  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  3712498 ccgacaccgggacacggctaatctgaggagtgtccgtgctt 3712458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 5922576 - 5922532
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||    
T  5922576 ccgacactgggacacgcctaatctgaggagtgtctctgcttcata 5922532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 36635406 - 36635450
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||||||||||||||| || |||||||| |||||||||||    
T  36635406 gacaccgggacacgcctaatccgaagagtgtccgtgcttcataga 36635450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 98
Target Start/End: Complemental strand, 5775343 - 5775304
Alignment:
Q  59 ccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  5775343 ccgggacacgcctaatccgaggagtgtccgtgcttcatag 5775304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 14465049 - 14465006
Alignment:
Q  54 cgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    |||||| |||||||| |||||||||||||||||| |||||||||    
T  14465049 cgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 16073478 - 16073513
Alignment:
Q  63 gacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||| ||||||||||||||||||||||    
T  16073478 gacacgcctaatccgaggagtgtccatgcttcatag 16073513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 25950515 - 25950472
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||||    
T  25950515 gacaccgagacacacctaatccgaggagtgtccatgcttcatag 25950472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 40784029 - 40784072
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||    
T  40784029 gacaccgggacacacctaatccgaggagtgtccgtgcttcatag 40784072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 49431103 - 49431146
Alignment:
Q  56 acaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||    
T  49431103 acaccgggacacgccttatccgaggagtgtccatgctttataga 49431146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 18966583 - 18966629
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||| ||||| ||||||||||| |||||||||| |||||||||||    
T  18966583 ccgacaacgggatacgcctaatctaaggagtgtccgtgcttcataga 18966629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 28084598 - 28084640
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttca 95  Q
    ||||||| ||||||||||||||| ||||||||||| |||||||    
T  28084598 ccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 29205542 - 29205588
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||| ||||||||||||||| ||||||||| | |||||||||||    
T  29205542 ccgacactgggacacgcctaatccgaggagtgttcgtgcttcataga 29205588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 34306789 - 34306743
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||| ||||||||||||||||||| ||| | |||||||||||    
T  34306789 ccgacaccgagacacgcctaatctgaggaatgttcgtgcttcataga 34306743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 37203326 - 37203372
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||||||||||||| |||||| ||| ||||||| |||||||||||    
T  37203326 ccgacaccgggacacgtctaatccgagaagtgtccgtgcttcataga 37203372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 944674 - 944617
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagt 83  Q
    ||||| ||| || |||||||||| |  ||||||||||||||| |||||||||||||||    
T  944674 gtgtcagtgtcgaacacagacgcgtgtccgacaccgggacacacctaatctgaggagt 944617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 8423703 - 8423658
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| ||| ||||||| ||| ||||||    
T  8423703 ccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcatag 8423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 12895259 - 12895214
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||| |||||||||||||||| ||||||||| | ||||||||||    
T  12895259 ccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 2361958 - 2361914
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||| ||||| |||||||||| |||||||| |||||||||||    
T  2361958 gacaccgagacacacctaatctgacgagtgtccgtgcttcataga 2361914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 3947746 - 3947702
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    |||||||| |||||| ||||||| ||||||||||| |||||||||    
T  3947746 ccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 10133756 - 10133828
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| | ||||| ||||| |  |||||||| |||||| |||||||||||||  || ||||||||||||    
T  10133756 gtgtcggtgtcagacactgacgcgtgtccgacaccaggacacacctaatctgaggaacgttcatgcttcatag 10133828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 21945577 - 21945625
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatagagt 101  Q
    |||||||||  |||||||||||| |||||||||| ||||||| ||||||    
T  21945577 ccgacaccgcaacacgcctaatccgaggagtgtctatgcttcttagagt 21945625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 30982852 - 30982808
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    |||||||||||||||||||||||  | |||||||| |||||||||    
T  30982852 ccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 40965345 - 40965389
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    ||||||||  ||||||||||||||||||||||||  |||||||||    
T  40965345 ccgacaccaagacacgcctaatctgaggagtgtcggtgcttcata 40965389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 11223836 - 11223792
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  11223836 gacaccgggacacgcctaatctgaggagtgtccgtgcttcataga 11223792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 2438730 - 2438661
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    ||||||||| ||||||| ||| |||  ||||||||||||||||||||||| ||||||||||| ||||||||    
T  2438730 gtgtcggtgtcggacac-gacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 19942341 - 19942382
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  19942341 gacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 37419828 - 37419873
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  37419828 ccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 44635568 - 44635612
Alignment:
Q  54 cgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  44635568 cgacaccgagacacgcctaatctgaggagtgtccgtgcttcatag 44635612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 15907901 - 15907851
Alignment:
Q  48 catagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  15907901 catatccgacaccgggacacgcccaatctgatgagtgtccgtgcttcatag 15907851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 26769596 - 26769642
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  26769596 ccgacactgggacacgcctaatccgaggagtgtccgtgcttcataga 26769642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 18840998 - 18840953
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  18840998 ccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 38117144 - 38117099
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||    
T  38117144 ccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 19536397 - 19536361
Alignment:
Q  62 ggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||| ||||||||||||||||||||||    
T  19536397 ggacacgcctaatccgaggagtgtccatgcttcatag 19536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 15657949 - 15657992
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    ||||| |||||||||||||| || ||||||||||||||||||||    
T  15657949 ccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 21782786 - 21782744
Alignment:
Q  56 acaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||    
T  21782786 acaccgggacacgtctaatctgtggagtgtccgtgcttcatag 21782744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 35056964 - 35056998
Alignment:
Q  64 acacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||||||||||| ||||||||||    
T  35056964 acacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 37559051 - 37559097
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||||||| |||||| ||||| ||||||||||| |||||||||||    
T  37559051 ccgacaccggtacacgcttaatccgaggagtgtccgtgcttcataga 37559097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 39323316 - 39323357
Alignment:
Q  57 caccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||| ||||| |||||||||||||||||||| ||||||||||    
T  39323316 cacctggacaggcctaatctgaggagtgtccgtgcttcatag 39323357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 42511367 - 42511322
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||| |||||||| |||||| ||||||||||| ||||||||||    
T  42511367 ccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 3414972 - 3414928
Alignment:
Q  54 cgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| |  ||||| ||||||||||||    
T  3414972 cgacaccgggacacgcctaatctaataagtgttcatgcttcatag 3414928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 5367237 - 5367288
Alignment:
Q  23 tatgtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatc 75  Q
    |||||||||||| ||||||| ||| |||| ||||| |||||||||||||||||    
T  5367237 tatgtgtcggtgtcggacac-gacacatatccgactccgggacacgcctaatc 5367288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 10535728 - 10535684
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||| |||||||||||||| ||||||||| | |||||||||||    
T  10535728 gacaccaggacacgcctaatccgaggagtgttcgtgcttcataga 10535684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 23058429 - 23058389
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgctt 93  Q
    ||||||||||||||||||||||| ||| ||||||| |||||    
T  23058429 ccgacaccgggacacgcctaatccgagaagtgtccgtgctt 23058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 23354962 - 23354926
Alignment:
Q  60 cgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  23354962 cgggacacgcctaatccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 22515898 - 22515827
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| ||||||| ||| |||| ||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  22515898 gtgtcggtgtcggacac-gacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 31694710 - 31694639
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| |||||||| || ||||  ||||||||| |||||||||||||||||||||||| ||||||||||    
T  31694710 gtgtcggtgtcggacaca-acacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcatag 31694639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 16812616 - 16812675
Alignment:
Q  39 acacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||| ||||| || |||| |||||||||||||||||||||||||||||| ||||||||||    
T  16812616 acaccgacgcttatccgaaaccgggacacgcctaatctgaggagtgtccgtgcttcatag 16812675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 27965983 - 27965940
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  27965983 gacaccgggacacgcctaatccgaggagtgtccatgcttcatag 27965940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 17831507 - 17831461
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  17831507 ccgacaccgggacacgcctaatcttaggagtgtccatgtttcataga 17831461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 32899937 - 32900011
Alignment:
Q  25 tgtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||||||| ||||||| |||||||  | ||||||||||||| ||||||| ||||| ||||| |||||||||||    
T  32899937 tgtgtcggtgtcggacaccgacgcatgtcggacaccgggacacccctaatccgaggattgtccttgcttcataga 32900011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 6427549 - 6427594
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||    
T  6427549 ccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 38075954 - 38075909
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||    
T  38075954 ccgacaccgggacacgcctaatttgaggagtgtacatgcttcatag 38075909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 40258918 - 40258874
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    |||||||| |||||||||||||| |||||||||||||||||||||    
T  40258918 ccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 42359434 - 42359391
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||    
T  42359434 ccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 113370 - 113412
Alignment:
Q  56 acaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  113370 acaccgggacacgcctaatccgaggagtgcccatgcttcatag 113412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 1704980 - 1704934
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||    
T  1704980 ccgacaccgagacacgcctaatccaaggagtgtccatgcttcataga 1704934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 2218302 - 2218352
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatagagtag 103  Q
    |||||||  |||||||||||||||||||||||||| |||||||||| ||||    
T  2218302 ccgacactaggacacgcctaatctgaggagtgtccgtgcttcatagtgtag 2218352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 1815331 - 1815376
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||||||||||||||||||| || || |||||||    
T  1815331 ccgacaccgggacacgcctaatctgaggagtgaccgtgattcatag 1815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 5944342 - 5944414
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||| ||||||||||| || |||  |||||||||||| |||||||||| ||||||||| | |||||||||||    
T  5944342 gtgtcgatgacggacaca-acacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcataga 5944414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 6936406 - 6936333
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||| ||| ||||||| |||||||| |||||||| | | || | ||||| |||||||||||||||||||||||    
T  6936406 gtgtctgtgtcggacaccgacgcatatccgacaccagaatacccttaatccgaggagtgtccatgcttcataga 6936333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 9828129 - 9828174
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||    
T  9828129 ccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 21366037 - 21365992
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  21366037 ccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 21365992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 40917834 - 40917879
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  40917834 ccgacaccgggacacgcctaatccgaggactgtccgtgcttcatag 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 22881611 - 22881567
Alignment:
Q  54 cgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||    
T  22881611 cgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22881567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 30359440 - 30359484
Alignment:
Q  54 cgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||    
T  30359440 cgacaacgggacacgccaaatctgaggagtgtccgtgcttcatag 30359484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 47989556 - 47989627
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| ||||||| ||| |||  | |||| |||||||||||||||| ||||||||||| ||||||||||    
T  47989556 gtgtcggtgtcggacac-gacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 1486689 - 1486646
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||    
T  1486689 ccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 2445932 - 2445991
Alignment:
Q  38 gacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    |||||||||||||  || | ||||||||||||||||| |||||||||||| || ||||||    
T  2445932 gacacagacgcatgtccaataccgggacacgcctaatttgaggagtgtccttgattcata 2445991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 16297266 - 16297223
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||    
T  16297266 ccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 22947806 - 22947849
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||    
T  22947806 gacacctggacacgcctaatccgaggagtgtccgtgcttcatag 22947849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 18556430 - 18556385
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||| ||||||||||||||| ||| ||||||| ||||||||||    
T  18556430 ccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 29144365 - 29144320
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||| |||||||||||| || |||||||| ||||||||||    
T  29144365 ccgacaccggaacacgcctaatccgaagagtgtccgtgcttcatag 29144320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 35702579 - 35702542
Alignment:
Q  61 gggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  35702579 gggacacgcctaatccgaggagtgtccgtgcttcatag 35702542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 98
Target Start/End: Original strand, 37598913 - 37598950
Alignment:
Q  61 gggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  37598913 gggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 46940793 - 46940748
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||| |||||||||||| ||||||||| | ||||||||||    
T  46940793 ccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatag 46940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 10233330 - 10233374
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    |||||||| |||||| ||||||| ||||||||||| |||||||||    
T  10233330 ccgacaccaggacacacctaatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 31511953 - 31511909
Alignment:
Q  54 cgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||| ||||||||||||||| ||||||||||  |||||||||||    
T  31511953 cgacatcgggacacgcctaatttgaggagtgtgtatgcttcatag 31511909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 36878541 - 36878585
Alignment:
Q  54 cgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||| |||||||||||||||  |||||||||| ||||||||||    
T  36878541 cgacacggggacacgcctaatcccaggagtgtccgtgcttcatag 36878585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 1401097 - 1401142
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||    
T  1401097 ccgacatcgggacacacctaatctgaggagtgtccatgcttcatag 1401142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 5409816 - 5409771
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  5409816 ccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 7133285 - 7133212
Alignment:
Q  25 tgtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||| ||||||| ||||| |  ||||||| ||||||| |||||||||||||| |||| ||||||||||    
T  7133285 tgtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 24339701 - 24339773
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||| ||||||| ||| | || ||||||||||||||||||||||| |||||||| || |||||||||||    
T  24339701 gtgtcggtgtcggacac-gacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcataga 24339773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 21880200 - 21880274
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatagagt 101  Q
    ||||||||| ||||||| ||| |||  |||||||| |||||||||||||| ||| ||||||| |||||||||||||    
T  21880200 gtgtcggtgtcggacac-gacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatagagt 21880274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 18215182 - 18215148
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtcc 87  Q
    |||||||||||||||||||||||||||||||||||    
T  18215182 ccgacaccgggacacgcctaatctgaggagtgtcc 18215148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 598282 - 598327
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| ||| ||||||| ||||||||||    
T  598282 ccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 6490790 - 6490835
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  6490790 ccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatag 6490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 9778579 - 9778624
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||    
T  9778579 ccgacaccgggacacgcctaatccaaggagtgtccgtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 43027449 - 43027404
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||    
T  43027449 ccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 32287448 - 32287404
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||    
T  32287448 ccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 1433533 - 1433578
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||| ||||||| |||||| ||||||||||| ||||||||||    
T  1433533 ccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 8842323 - 8842282
Alignment:
Q  54 cgacaccgggacacgcctaatctgaggagtgtccatgcttca 95  Q
    ||||||||||||||||||||||  |||||||||| |||||||    
T  8842323 cgacaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 14729777 - 14729822
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||| ||||| ||||||||||| | ||||||||    
T  14729777 ccgacaccgggacacgcttaatccgaggagtgtccgtacttcatag 14729822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 22868123 - 22868164
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    ||||||||||||| | ||||| ||||||||||||||||||||    
T  22868123 gacaccgggacacacataatccgaggagtgtccatgcttcat 22868164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 29763174 - 29763129
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||| | |||||||||||||| ||||||||||| ||||||||||    
T  29763174 ccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 40287347 - 40287306
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttc 94  Q
    |||||||||||||| |||||||| ||||||||||| ||||||    
T  40287347 ccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 21568604 - 21568560
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||||||||| || ||||||||||||||||  |||||||||||    
T  21568604 gacaccgggacatgcttaatctgaggagtgtctgtgcttcataga 21568560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 35862034 - 35862070
Alignment:
Q  62 ggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  35862034 ggacacgcctaatccgaggagtgtccgtgcttcatag 35862070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000007; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 10339125 - 10339054
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| ||||||| ||| |||  ||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  10339125 gtgtcggtgtcggacac-gacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 7378053 - 7378099
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||    
T  7378053 ccgacaccgggacacggctaatctgagaagtgtccgtgcttcataga 7378099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 25207814 - 25207859
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||    
T  25207814 ccgacaccgggacacgcctaatatgaggagtgttcatgctttatag 25207859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 426514 - 426478
Alignment:
Q  62 ggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||||||||||||| ||||||||||    
T  426514 ggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 5732510 - 5732474
Alignment:
Q  62 ggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||| ||||||||||||||||||||||    
T  5732510 ggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 31959224 - 31959268
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||    
T  31959224 ccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 34595210 - 34595254
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||    
T  34595210 gacaccgggacacacctaatccgaggagtgtccgtgcttcataga 34595254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 98
Target Start/End: Complemental strand, 10770646 - 10770607
Alignment:
Q  59 ccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  10770646 ccgggacatgcctaatctgaggagtgtccgtgcttcatag 10770607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 17327633 - 17327590
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||    
T  17327633 gacacagggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 8389453 - 8389411
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttca 95  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||    
T  8389453 ccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 9025490 - 9025448
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttca 95  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||    
T  9025490 ccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 9107344 - 9107298
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||||||||| ||||||| |||||||| || |||||||||||    
T  9107344 ccgacaccgggacacacctaatccgaggagtgcccgtgcttcataga 9107298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 5569825 - 5569866
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    |||||| | |||||||||||||||||||||||| ||||||||    
T  5569825 gacacctgaacacgcctaatctgaggagtgtccgtgcttcat 5569866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 5970108 - 5970036
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||| ||||||| ||| |||  |||||| ||||||||||| |||| |||||||| | ||||||||||||    
T  5970108 gtgtcggtgtcggacac-gacacatttccgacatcgggacacgcccaatccgaggagtgactatgcttcataga 5970036  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 7248443 - 7248488
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||| | |||| ||||||||||| ||||||||||    
T  7248443 ccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 7938174 - 7938219
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| ||||||||| ||| ||||||||||| ||||||||||    
T  7938174 ccgacaccgagacacgcctgatccgaggagtgtccgtgcttcatag 7938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 8365493 - 8365448
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||| ||||||||||||||| ||||||| ||| ||||||||||    
T  8365493 ccgacactgggacacgcctaatccgaggagtctccgtgcttcatag 8365448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 8714039 - 8714111
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||| ||||||| ||| |||  |||||| ||||||||||| |||| ||||||||||  |||||||||||    
T  8714039 gtgtcggtgtcggacac-gacacatttccgacatcgggacacgcccaatccgaggagtgtctttgcttcataga 8714111  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 8776953 - 8776908
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| ||||| ||||||| ||||||||||| ||||||||||    
T  8776953 ccgacaccgagacacacctaatccgaggagtgtccgtgcttcatag 8776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 9629468 - 9629513
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||| | |||||| |||||| ||||||||||||||||||||||    
T  9629468 ccgacactgagacacgtctaatccgaggagtgtccatgcttcatag 9629513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 9911518 - 9911481
Alignment:
Q  62 ggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  9911518 ggacacgcctaatccgaggagtgttcatgcttcataga 9911481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 12236737 - 12236778
Alignment:
Q  57 caccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||| ||||||||||| | ||||||||||    
T  12236737 caccgggacacgcctaacctgaggagtgttcgtgcttcatag 12236778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 16766782 - 16766827
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||||||||||||| || || ||||| ||||||||||    
T  16766782 ccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 26178661 - 26178620
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcat 96  Q
    ||||||||||||||||||||| ||||||||||  ||||||||    
T  26178661 gacaccgggacacgcctaatcggaggagtgtctgtgcttcat 26178620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 28152172 - 28152217
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||| |||||||| ||||||||| | ||||||||||    
T  28152172 ccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 31385007 - 31385048
Alignment:
Q  56 acaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    ||||||||||||||||||||  |||||||||| |||||||||    
T  31385007 acaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 32978910 - 32978842
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttca 95  Q
    ||||||||| ||||||| ||| |||  |||||||||||||||| ||||||  |||||||||| |||||||    
T  32978910 gtgtcggtgtcggacac-gacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 34895013 - 34894968
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||| ||||||| |||||| |||||||||||| ||||||||||    
T  34895013 ccgacacagggacacacctaatatgaggagtgtccgtgcttcatag 34894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 4878025 - 4878061
Alignment:
Q  62 ggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  4878025 ggacacgcctaatccgaggagtgtccgtgcttcatag 4878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 17841574 - 17841530
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    ||||||| | ||||||||||||| ||||||||||| |||||||||    
T  17841574 ccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 473 - 403
Alignment:
Q  26 gtgtcggtgacggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    ||||||||| ||||||| ||||| |  ||||||||||||||| ||||||| ||||||||||| |||||||||    
T  473 gtgtcggtgtcggacac-gacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 4866 - 4820
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  4866 ccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 4820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 8872 - 8918
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  8872 ccgacaccgagacacgcctaatctgaggagtctccgtgcttcataga 8918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 241679 - 241725
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcataga 99  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  241679 ccgacaccgggacacgcctaatccgagaagtgtccgtgcttcataga 241725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 236957 - 236914
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||    
T  236957 gacaccgggacacacctaatctgaggagtgtctgtgcttcatag 236914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 51900 - 51941
Alignment:
Q  56 acaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  51900 acaccgggacacgcctaatccgaggaatgtccatgcttcata 51941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 3384 - 3427
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||    
T  3384 gacactgggacacgcctaatccgaggagtgtccgtgcttcatag 3427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 92898 - 92940
Alignment:
Q  55 gacaccgggacacgcctaatctgaggagtgtccatgcttcata 97  Q
    |||||| |||||||||||||| ||||||||||| |||||||||    
T  92898 gacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 3823 - 3778
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||| || ||||||||||||| ||||||||||| ||||||||||    
T  3823 ccgacatcgagacacgcctaatccgaggagtgtccttgcttcatag 3778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 135308 - 135263
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||| ||||||||||||||||||| |||| | ||||||||||    
T  135308 ccgacaccaggacacgcctaatctgaggcgtgttcgtgcttcatag 135263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 71810 - 71855
Alignment:
Q  53 ccgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    |||||||||||||||| |||||| ||||||||||  ||||||||||    
T  71810 ccgacaccgggacacgactaatccgaggagtgtcggtgcttcatag 71855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 3014 - 3058
Alignment:
Q  54 cgacaccgggacacgcctaatctgaggagtgtccatgcttcatag 98  Q
    ||||||||| |||||||||||| ||||||||||| |||| |||||    
T  3014 cgacaccggaacacgcctaatccgaggagtgtccgtgctccatag 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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