View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1319_low_20 (Length: 391)
Name: NF1319_low_20
Description: NF1319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1319_low_20 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 258; Significance: 1e-143; HSPs: 17)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 21 - 311
Target Start/End: Original strand, 22353954 - 22354246
Alignment:
| Q |
21 |
acatcatcaaacactacaacgtacctttttccttgcaagttgtttctcacttcatcaactaatggctttcgatccatttgatggagactctgaggaggat |
120 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22353954 |
acattatcaaacactacaacgtacctttttccttgcaagttgtttctcacttcatcaactaatggctttcgatccatttgatggagactctgaggaggat |
22354053 |
T |
 |
| Q |
121 |
ctttccttcgttgtttgtaaatctccagcaaaatgtccctcaacactttttctttgttgtatggtcgaaataccgtgattc--atacatgacaatcaaag |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| | |||||| |||||||||| |
|
|
| T |
22354054 |
ctttccttcgttgtttgtaaatctccagcaaaatgtccctcaacactttttctatgttgtatggtcgagataccgtgatccatatacataacaatcaaag |
22354153 |
T |
 |
| Q |
219 |
ttcttaactaccttttggttgtcaaaaacttttatggctagagtggtttttcccagtcctcccattccaacaatggagacaactgtgcgatct |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22354154 |
ttcttaactaccttttggttgtcaaaaacttttctggctagagtggtttttcccagtcctcccattccaacaatggagacaactgtgcgatct |
22354246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 21 - 362
Target Start/End: Original strand, 22630581 - 22630923
Alignment:
| Q |
21 |
acatcatcaaacactacaa-cgtacctttttccttgcaagttgtttctcacttcatcaactaatggctttcgatccatttgatggagactctgaggagga |
119 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22630581 |
acatcatcaaacactacaaacgtacctttttccttgcaagtagtttctcacttcatcaactaatggctttcgatccatttgatggagactttgaggagga |
22630680 |
T |
 |
| Q |
120 |
tctttccttcgttgtttgtaaatctccagcaaaatgtccctcaacactttttctttgttgtatggtcgaaataccgtgattcatacatgacaatcaaagt |
219 |
Q |
| |
|
||||||| | |||||||||||||||| ||||||||||||||||||| | ||||| | |||||||||||| | |||||||| ||| ||||||||||||||| |
|
|
| T |
22630681 |
tctttcccttgttgtttgtaaatctcgagcaaaatgtccctcaacaatgtttctatattgtatggtcgagacaccgtgatccattcatgacaatcaaagt |
22630780 |
T |
 |
| Q |
220 |
tcttaactaccttttggttgtcaaaaacttttatggctagagtggtttttcccagtcctcccattccaacaatggagacaactgtgcgatctgctcttcc |
319 |
Q |
| |
|
||||| |||||| |||||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
22630781 |
gtttaacgacctttcggttgtcaaaaattttcttggcaagagtggttttccccagtcctcccattccaacaatagagacaactgtgcgttctgctcttcc |
22630880 |
T |
 |
| Q |
320 |
ctctacaagccaattaatcagtttctatcgtggctcttcaaag |
362 |
Q |
| |
|
||||| ||||||| ||||| ||| | ||||||||| |||||| |
|
|
| T |
22630881 |
ctctatcagccaatcaatcaatttgtctcgtggctcgtcaaag |
22630923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 21 - 361
Target Start/End: Original strand, 22468091 - 22468431
Alignment:
| Q |
21 |
acatcatcaaacactacaacgtacctttttccttgcaagttgtttctcacttcatcaactaatggctttcgatccatttgatggagactctgaggaggat |
120 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22468091 |
acatcatcaaacactataacatacctttttccttgcaagtagtttctcacttcatcaactaatggctttcgatccatctgatggagactctgaggaggat |
22468190 |
T |
 |
| Q |
121 |
ctttccttcgttgtttgtaaatctccagcaaaatgtccctcaacactttttctttgttgtatggtcgaaataccgtgattcatacatgacaatcaaagtt |
220 |
Q |
| |
|
||| || | ||||||||||||| || |||||||| |||||||||| ||||||| | |||||||||||| | |||||||| ||||||||||||||||| | |
|
|
| T |
22468191 |
cttccccttgttgtttgtaaatatcgagcaaaatttccctcaacaatttttctatattgtatggtcgagacaccgtgatccatacatgacaatcaaaatg |
22468290 |
T |
 |
| Q |
221 |
cttaactaccttttggttgtcaaaaacttttatggctagagtggtttttcccagtcctcccattccaacaatggagacaactgtgcgatctgctcttccc |
320 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |
|
|
| T |
22468291 |
tttaacgaccttttggttgtcaaaaactttcttggctatagtggtttttcccagtcctcccattccaactatggagacaacggtgcgctctgctcttccc |
22468390 |
T |
 |
| Q |
321 |
tctacaagccaattaatcagtttctatcgtggctcttcaaa |
361 |
Q |
| |
|
||||| | | ||| ||||| ||| | ||||||||||||||| |
|
|
| T |
22468391 |
tctaccaacaaatcaatcaatttgtctcgtggctcttcaaa |
22468431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 21 - 362
Target Start/End: Original strand, 22442882 - 22443223
Alignment:
| Q |
21 |
acatcatcaaacactacaacgtacctttttccttgcaagttgtttctcacttcatcaactaatggctttcgatccatttgatggagactctgaggaggat |
120 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
22442882 |
acatcatcaaacactacaacataccttttttcttgcaagtagtttctcacttcatcaactaatgactgtcgatccatttgatggagactctgaggaggaa |
22442981 |
T |
 |
| Q |
121 |
ctttccttcgttgtttgtaaatctccagcaaaatgtccctcaacactttttctttgttgtatggtcgaaataccgtgattcatacatgacaatcaaagtt |
220 |
Q |
| |
|
|||||||| |||||||||||| ||| |||| ||||||||||||||||||||| | ||| ||| | || | ||| |||| |||| | |||| ||||||| |
|
|
| T |
22442982 |
ctttcctttgttgtttgtaaaactcgagcataatgtccctcaacactttttcaatattgaatgattgagacaccatgatccataaaagacagtcaaagtg |
22443081 |
T |
 |
| Q |
221 |
cttaactaccttttggttgtcaaaaacttttatggctagagtggtttttcccagtcctcccattccaacaatggagacaactgtgcgatctgctcttccc |
320 |
Q |
| |
|
|||||||||||||||||||||||||| || | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
22443082 |
cttaactaccttttggttgtcaaaaatttgtctggctagagtggtttttcccaatcctcccattccaacaatggagacaactgtgcggtcttctcttccc |
22443181 |
T |
 |
| Q |
321 |
tctacaagccaattaatcagtttctatcgtggctcttcaaag |
362 |
Q |
| |
|
||||| | | ||| ||||| ||| | || ||||||||||||| |
|
|
| T |
22443182 |
tctaccaacaaatcaatcaatttgtctcttggctcttcaaag |
22443223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 21 - 319
Target Start/End: Original strand, 22358145 - 22358443
Alignment:
| Q |
21 |
acatcatcaaacactacaacgtacctttttccttgcaagttgtttctcacttcatcaactaatggctttcgatccatttgatggagactctgaggaggat |
120 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||| |
|
|
| T |
22358145 |
acatcatcaaacactacaacataccttttttcttgcaagtagtttctcacttcatcaactaatgactgtcgatccatttgacggagactctgaggaggaa |
22358244 |
T |
 |
| Q |
121 |
ctttccttcgttgtttgtaaatctccagcaaaatgtccctcaacactttttctttgttgtatggtcgaaataccgtgattcatacatgacaatcaaagtt |
220 |
Q |
| |
|
|||||||| |||||||||||| ||| |||| |||||||||||||||||||||| | |||||||||||| | ||||| || |||||| ||| |||||||| |
|
|
| T |
22358245 |
ctttcctttgttgtttgtaaaactcgagcataatgtccctcaacactttttctgtattgtatggtcgagacaccgtaatccatacacgacgatcaaagtg |
22358344 |
T |
 |
| Q |
221 |
cttaactaccttttggttgtcaaaaacttttatggctagagtggtttttcccagtcctcccattccaacaatggagacaactgtgcgatctgctcttcc |
319 |
Q |
| |
|
|| || |||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| |
|
|
| T |
22358345 |
ttttacgacctttgggttgtcaaaaactttcttcgctagagtggtttttcccagtcctcccattccaacaatggagacaattgtccggtctgctcttcc |
22358443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 21 - 325
Target Start/End: Original strand, 22635646 - 22635950
Alignment:
| Q |
21 |
acatcatcaaacactacaacgtacctttttccttgcaagttgtttctcacttcatcaactaatggctttcgatccatttgatggagactctgaggaggat |
120 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
22635646 |
acatcatcaaacactaaaacatacctttttccttgaaagtggtttctcacttcatcaactaatgactttcgatccatttgatggagactctcaggaggaa |
22635745 |
T |
 |
| Q |
121 |
ctttccttcgttgtttgtaaatctccagcaaaatgtccctcaacactttttctttgttgtatggtcgaaataccgtgattcatacatgacaatcaaagtt |
220 |
Q |
| |
|
||| || | |||||||||||| ||| |||| |||||| | ||||||||||||| | |||||||||||| | ||||| || |||||| |||||||||||| |
|
|
| T |
22635746 |
cttccccttgttgtttgtaaaactcgagcataatgtctcgcaacactttttctgtattgtatggtcgagacaccgtaatccatacacgacaatcaaagta |
22635845 |
T |
 |
| Q |
221 |
cttaactaccttttggttgtcaaaaacttttatggctagagtggtttttcccagtcctcccattccaacaatggagacaactgtgcgatctgctcttccc |
320 |
Q |
| |
|
|| || |||||| |||||||||||||||| | ||||||||||||||||| ||||||||||||||| |||||||||| ||| || |||||||||||| |
|
|
| T |
22635846 |
ttttacgacctttgggttgtcaaaaactttcttcgctagagtggtttttccttgtcctcccattccaaagatggagacaattgtccggtctgctcttccc |
22635945 |
T |
 |
| Q |
321 |
tctac |
325 |
Q |
| |
|
|||| |
|
|
| T |
22635946 |
gctac |
22635950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 21 - 325
Target Start/End: Original strand, 22368070 - 22368359
Alignment:
| Q |
21 |
acatcatcaaacactacaacgtacctttttccttgcaagttgtttctcacttcatcaactaatggctttcgatccatttgatggagactctgaggaggat |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||| ||||| ||||||||| |
|
|
| T |
22368070 |
acatcatcaaacactacaacgtacctttttccttgcaagtagtttctcacttcatcaactaataactttccatccatttgatgaagactttgaggaggac |
22368169 |
T |
 |
| Q |
121 |
ctttccttcgttgtttgtaaatctccagcaaaatgtccctcaacactttttctttgttgtatggtcgaaataccgtgattcatacatgacaatcaaagtt |
220 |
Q |
| |
|
||||| | |||| || |||||| ||| || ||||||||| || ||||||||| | |||||||| |||| | |||||||||||| |
|
|
| T |
22368170 |
atttcccttgttg---------------cagtatgtccttcagcaatttttctttattatatggtcgagaaaccgtgatccataaacgacaatcaaagtg |
22368254 |
T |
 |
| Q |
221 |
cttaactaccttttggttgtcaaaaacttttatggctagagtggtttttcccagtcctcccattccaacaatggagacaactgtgcgatctgctcttccc |
320 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
22368255 |
tttaacgaccttttggttgtcaaaaactttcttggctagagtggtttttcccagtcctcccattccaacaatggagacaactgtgcggtgtgctcttccc |
22368354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 22632217 - 22632348
Alignment:
| Q |
230 |
cttttggttgtcaaaaacttttatggctagagtggtttttcccagtcctcccattccaacaatggagacaactgtgcgatctgctcttccctctacaagc |
329 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
22632217 |
ctttcggttgtcaaaaactttcttggctagagtggttttccccagtcctcccattccaataatggagacaactgtgcgatctgctcttccctctaccagc |
22632316 |
T |
 |
| Q |
330 |
caattaatcagtttctatcgtggctcttcaaa |
361 |
Q |
| |
|
|||||||| ||||||| | |||||||||||| |
|
|
| T |
22632317 |
caattaattagtttctctattggctcttcaaa |
22632348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 320
Target Start/End: Original strand, 22436777 - 22437076
Alignment:
| Q |
21 |
acatcatcaaacactacaacgtacctttttccttgcaagttgtttctcacttcatcaactaatggctttcgatccatttgatggagactctgaggaggat |
120 |
Q |
| |
|
||||| |||||||| |||| |||||||||| ||||| | ||| |||||||||||| || |||| || | ||||| || | |||||||||||||| |
|
|
| T |
22436777 |
acatcgtcaaacacgacaaagtaccttttttgctgcaactgttttatcacttcatcaatcaacggctctccgttcatttcatatatactctgaggaggat |
22436876 |
T |
 |
| Q |
121 |
ctttccttcgttgtttgtaaatctccagcaaaatgtccctcaacactttttctttgttgtatggtcgaaataccgtgattcatacatgacaatcaaagtt |
220 |
Q |
| |
|
|||||| | |||||||||||||||| ||||||||||||||||||| ||||||||| |||||| | || | || ||||| ||||||||||| ||||| | |
|
|
| T |
22436877 |
ctttcccttgttgtttgtaaatctcgagcaaaatgtccctcaacaatttttctttactgtatgattgagacactgtgatccatacatgacagtcaaattg |
22436976 |
T |
 |
| Q |
221 |
cttaactaccttttggttgtcaaaaacttttatggctagagtggtttttcccagtcctcccattccaacaatggagacaactgtgcgatctgctcttccc |
320 |
Q |
| |
|
|| | || || ||| ||||||||||| |||| ||||| |||||||| | ||||||||||| ||||| |||||||||| || ||| |||||||| |
|
|
| T |
22436977 |
ttttaagactttgatgttctcaaaaactttcttggccagagtagtttttccttgccctcccattcctacaatagagacaactgcacgctctactcttccc |
22437076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 22431316 - 22431396
Alignment:
| Q |
21 |
acatcatcaaacactacaacgtacctttttccttgcaagttgtttctcacttcatcaactaatggctttcgatccatttga |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| |||| ||||||||||||||| |
|
|
| T |
22431316 |
acatcatcaaacactacaacgtacctttttccttgcaagtagtttctcagtttatcaagtaataagtttcgatccatttga |
22431396 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 195 - 361
Target Start/End: Original strand, 22431469 - 22431634
Alignment:
| Q |
195 |
gtgattcatacatgacaatcaaagttcttaactaccttttggttgtcaaaaacttttatggctagagtggtttttcccagtcctcccattccaacaatgg |
294 |
Q |
| |
|
||||| |||| | |||||||||||| |||| ||| | | ||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22431469 |
gtgatccataaacgacaatcaaagtgtttaaggaccctgttgttgtcaaaaactttcttggttagagtggtttttcccagtcctcccattcc-acaatgg |
22431567 |
T |
 |
| Q |
295 |
agacaactgtgcgatctgctcttccctctacaagccaattaatcagtttctatcgtggctcttcaaa |
361 |
Q |
| |
|
|||| |||||| | ||| || |||| | ||| ||||||| ||||| | | | || |||||||||||| |
|
|
| T |
22431568 |
agaccactgtgagctcttcttttccatttaccagccaatcaatcaatatgtctcttggctcttcaaa |
22431634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 22458632 - 22458714
Alignment:
| Q |
21 |
acatcatcaaacactacaacgtacctttttccttgcaagttgtttctcacttcatcaactaatggctttcgatccatttgatg |
103 |
Q |
| |
|
||||||||||| |||| ||| ||||||||| | ||||||| ||| |||||||||||||| |||| || ||||| ||||||||| |
|
|
| T |
22458632 |
acatcatcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatg |
22458714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 22481613 - 22481695
Alignment:
| Q |
21 |
acatcatcaaacactacaacgtacctttttccttgcaagttgtttctcacttcatcaactaatggctttcgatccatttgatg |
103 |
Q |
| |
|
||||||||||| |||| ||| ||||||||| | ||||||| ||| |||||||||||||| |||| || ||||| ||||||||| |
|
|
| T |
22481613 |
acatcatcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatg |
22481695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 305
Target Start/End: Original strand, 22458807 - 22458916
Alignment:
| Q |
196 |
tgattcatacatgacaatcaaagttcttaactaccttttggttgtcaaaaacttttatggctagagtggtttttcccagtcctcccattccaacaatgga |
295 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| | ||| | || ||||||||| || | || ||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
22458807 |
tgatccatacatgacaatcaaagtgtttaacgatcttgttgtcgtcaaaaaccttctttgcaagagttgtttttccttgtcctccctttccaacaatggt |
22458906 |
T |
 |
| Q |
296 |
gacaactgtg |
305 |
Q |
| |
|
||||| |||| |
|
|
| T |
22458907 |
gacaattgtg |
22458916 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 305
Target Start/End: Original strand, 22481788 - 22481897
Alignment:
| Q |
196 |
tgattcatacatgacaatcaaagttcttaactaccttttggttgtcaaaaacttttatggctagagtggtttttcccagtcctcccattccaacaatgga |
295 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| | ||| | || ||||||||| || | || ||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
22481788 |
tgatccatacatgacaatcaaagtgtttaacgatcttgttgtcgtcaaaaaccttctttgcaagagttgtttttccttgtcctccctttccaacaatggt |
22481887 |
T |
 |
| Q |
296 |
gacaactgtg |
305 |
Q |
| |
|
||||| |||| |
|
|
| T |
22481888 |
gacaattgtg |
22481897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 21945730 - 21945682
Alignment:
| Q |
238 |
tgtcaaaaacttttatggctagagtggtttttcccagtcctcccattcc |
286 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| | ||||||||||| |
|
|
| T |
21945730 |
tgtcaaaaactttcttggctagagtggtttttccttgccctcccattcc |
21945682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 22115408 - 22115352
Alignment:
| Q |
21 |
acatcatcaaacactacaacgtacctttttccttgcaagttgtttctcacttcatca |
77 |
Q |
| |
|
|||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||| |
|
|
| T |
22115408 |
acatcatcaaacacgacaacgtacctctttttctgcaagtattttctcacttcatca |
22115352 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 29610710 - 29610771
Alignment:
| Q |
21 |
acatcatcaaacactacaacgtacctttttccttgcaagttgtttctcacttcatcaactaa |
82 |
Q |
| |
|
||||| ||||||||||||| ||||||||| | ||||||| |||||||||||||| ||||| |
|
|
| T |
29610710 |
acatcgtcaaacactacaaggtaccttttctcctgcaagtaatttctcacttcatcgactaa |
29610771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 27294654 - 27294606
Alignment:
| Q |
238 |
tgtcaaaaacttttatggctagagtggtttttcccagtcctcccattcc |
286 |
Q |
| |
|
||||||||||||| || |||||||||||||||| ||||||||||||| |
|
|
| T |
27294654 |
tgtcaaaaactttcttgactagagtggtttttccttgtcctcccattcc |
27294606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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