View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1319_low_48 (Length: 286)

Name: NF1319_low_48
Description: NF1319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1319_low_48
NF1319_low_48
[»] chr1 (25 HSPs)
chr1 (62-271)||(48594179-48594388)
chr1 (62-271)||(48598790-48598999)
chr1 (62-275)||(48589088-48589305)
chr1 (176-271)||(2820957-2821052)
chr1 (177-271)||(12800424-12800518)
chr1 (177-271)||(28371657-28371751)
chr1 (177-273)||(12799989-12800085)
chr1 (179-271)||(48153113-48153205)
chr1 (176-271)||(50164236-50164331)
chr1 (177-271)||(2821443-2821537)
chr1 (176-271)||(33631044-33631139)
chr1 (177-271)||(43756301-43756395)
chr1 (177-271)||(50164663-50164757)
chr1 (176-271)||(28371198-28371293)
chr1 (174-276)||(38469234-38469336)
chr1 (177-271)||(43755849-43755943)
chr1 (176-271)||(38328840-38328935)
chr1 (175-240)||(17151864-17151929)
chr1 (175-271)||(38468904-38469000)
chr1 (175-243)||(33630475-33630543)
chr1 (205-271)||(38328415-38328481)
chr1 (176-237)||(17151001-17151062)
chr1 (204-239)||(32537672-32537707)
chr1 (177-239)||(32538488-32538550)
chr1 (203-232)||(45065378-45065407)
[»] chr6 (17 HSPs)
chr6 (174-271)||(28983246-28983343)
chr6 (175-271)||(34717709-34717805)
chr6 (176-271)||(34717241-34717336)
chr6 (177-271)||(19062777-19062871)
chr6 (183-273)||(28535415-28535506)
chr6 (175-271)||(7635589-7635685)
chr6 (177-271)||(28982782-28982875)
chr6 (176-271)||(7635123-7635218)
chr6 (177-271)||(18290449-18290543)
chr6 (176-245)||(2924952-2925021)
chr6 (176-271)||(18290214-18290309)
chr6 (176-271)||(4348846-4348941)
chr6 (204-271)||(12999431-12999498)
chr6 (203-240)||(10608304-10608341)
chr6 (178-222)||(14496445-14496489)
chr6 (203-240)||(930950-930988)
chr6 (183-239)||(18605845-18605901)
[»] chr7 (23 HSPs)
chr7 (176-271)||(20559745-20559840)
chr7 (176-271)||(20560235-20560330)
chr7 (177-271)||(33139774-33139868)
chr7 (177-271)||(33140248-33140342)
chr7 (176-271)||(42901090-42901185)
chr7 (177-271)||(4179637-4179731)
chr7 (176-271)||(4180292-4180387)
chr7 (177-271)||(42900647-42900741)
chr7 (177-271)||(40641124-40641218)
chr7 (175-271)||(30414179-30414275)
chr7 (175-271)||(25137410-25137506)
chr7 (215-276)||(35211940-35212001)
chr7 (177-268)||(40640653-40640741)
chr7 (177-271)||(25137878-25137973)
chr7 (177-238)||(33686926-33686987)
chr7 (203-240)||(29006374-29006411)
chr7 (203-240)||(29007183-29007220)
chr7 (202-239)||(41224828-41224865)
chr7 (176-239)||(33687735-33687798)
chr7 (174-247)||(42607078-42607151)
chr7 (204-237)||(35613231-35613264)
chr7 (203-240)||(44896073-44896110)
chr7 (203-239)||(29314608-29314644)
[»] chr3 (30 HSPs)
chr3 (177-271)||(930387-930481)
chr3 (176-271)||(11442109-11442204)
chr3 (176-271)||(929910-930005)
chr3 (177-271)||(21166110-21166204)
chr3 (177-271)||(32473761-32473855)
chr3 (178-271)||(42257215-42257308)
chr3 (176-271)||(32474416-32474511)
chr3 (183-273)||(38000244-38000334)
chr3 (175-273)||(14788552-14788650)
chr3 (175-271)||(43521075-43521168)
chr3 (178-271)||(50766631-50766723)
chr3 (174-271)||(26006732-26006829)
chr3 (176-271)||(5113197-5113292)
chr3 (192-271)||(11441664-11441743)
chr3 (177-271)||(20586538-20586632)
chr3 (177-271)||(24394688-24394782)
chr3 (174-271)||(5113662-5113759)
chr3 (175-271)||(36992127-36992223)
chr3 (175-271)||(37017567-37017663)
chr3 (177-271)||(20586072-20586166)
chr3 (204-271)||(45000781-45000848)
chr3 (175-271)||(14788272-14788368)
chr3 (177-271)||(24394247-24394341)
chr3 (177-271)||(26006146-26006240)
chr3 (178-271)||(45000316-45000409)
chr3 (176-271)||(43104731-43104826)
chr3 (175-226)||(50836214-50836265)
chr3 (175-226)||(50839588-50839639)
chr3 (203-271)||(42258016-42258083)
chr3 (181-218)||(24181950-24181987)
[»] chr8 (14 HSPs)
chr8 (174-271)||(14197656-14197753)
chr8 (177-271)||(37657847-37657941)
chr8 (179-271)||(39439760-39439852)
chr8 (177-269)||(41714603-41714695)
chr8 (177-271)||(30846016-30846110)
chr8 (176-271)||(30846450-30846545)
chr8 (179-271)||(39440553-39440644)
chr8 (177-236)||(31408164-31408223)
chr8 (220-276)||(41715216-41715272)
chr8 (199-243)||(42573602-42573646)
chr8 (220-271)||(37658498-37658549)
chr8 (203-240)||(35759223-35759260)
chr8 (203-240)||(41348171-41348208)
chr8 (203-239)||(41092199-41092235)
[»] chr5 (16 HSPs)
chr5 (177-271)||(5620823-5620917)
chr5 (174-273)||(42655692-42655791)
chr5 (175-271)||(12330616-12330712)
chr5 (176-271)||(3595776-3595871)
chr5 (176-271)||(7858326-7858421)
chr5 (177-271)||(8321341-8321435)
chr5 (177-271)||(12330148-12330242)
chr5 (196-271)||(16996983-16997058)
chr5 (177-271)||(29759597-29759691)
chr5 (178-264)||(3596254-3596340)
chr5 (177-271)||(8320875-8320969)
chr5 (177-271)||(24027187-24027281)
chr5 (204-271)||(24027640-24027707)
chr5 (175-271)||(7858773-7858869)
chr5 (176-241)||(31078455-31078520)
chr5 (176-234)||(36912245-36912302)
[»] chr4 (21 HSPs)
chr4 (177-271)||(19860330-19860424)
chr4 (176-271)||(19860826-19860921)
chr4 (176-271)||(5235373-5235468)
chr4 (176-271)||(20174969-20175064)
chr4 (176-271)||(6934456-6934551)
chr4 (176-263)||(52532392-52532479)
chr4 (176-271)||(6933820-6933915)
chr4 (179-271)||(52532125-52532217)
chr4 (176-271)||(5259282-5259377)
chr4 (176-271)||(5235840-5235935)
chr4 (174-271)||(30213869-30213966)
chr4 (203-243)||(46764279-46764319)
chr4 (203-240)||(11680303-11680340)
chr4 (203-240)||(11688582-11688619)
chr4 (203-240)||(25655623-25655660)
chr4 (203-243)||(31910581-31910621)
chr4 (198-240)||(12590187-12590229)
chr4 (177-239)||(3167463-3167525)
chr4 (183-239)||(39412771-39412827)
chr4 (203-247)||(3847913-3847957)
chr4 (176-239)||(39413607-39413670)
[»] chr2 (18 HSPs)
chr2 (177-271)||(3705337-3705431)
chr2 (177-271)||(16681566-16681660)
chr2 (175-271)||(3705778-3705876)
chr2 (177-271)||(7994527-7994621)
chr2 (177-271)||(30899390-30899484)
chr2 (176-271)||(15561994-15562089)
chr2 (176-271)||(16903851-16903946)
chr2 (176-271)||(16992345-16992441)
chr2 (176-271)||(37996537-37996632)
chr2 (177-271)||(6609997-6610091)
chr2 (176-271)||(15561540-15561635)
chr2 (204-271)||(7994082-7994149)
chr2 (177-271)||(30899855-30899949)
chr2 (178-271)||(6609552-6609645)
chr2 (204-271)||(16903425-16903491)
chr2 (203-260)||(16682231-16682288)
chr2 (176-240)||(34617652-34617716)
chr2 (203-239)||(40992249-40992285)
[»] scaffold0508 (2 HSPs)
scaffold0508 (174-271)||(4130-4227)
scaffold0508 (177-271)||(4578-4672)
[»] scaffold0022 (2 HSPs)
scaffold0022 (176-271)||(61573-61668)
scaffold0022 (223-271)||(62041-62089)
[»] scaffold0006 (1 HSPs)
scaffold0006 (204-271)||(202237-202304)
[»] scaffold0095 (1 HSPs)
scaffold0095 (179-271)||(42886-42977)
[»] scaffold0136 (1 HSPs)
scaffold0136 (174-248)||(22203-22278)
[»] scaffold0155 (1 HSPs)
scaffold0155 (203-239)||(17366-17402)


Alignment Details
Target: chr1 (Bit Score: 152; Significance: 2e-80; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 48594388 - 48594179
Alignment:
Q  62 aattatatgataatattaatttgtattgcaaataatctaagtaaaataacctcaannnnnnnnnnaagaaatcaaaatggtatatattgaatcaactgac 161  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||          |||||||||||||||||||||||||||||||||||    
T  48594388 aattatatgataatattaatttatattgcaaataatctaagtaaaaaaacctcaattttttttgtaagaaatcaaaatggtatatattgaatcaactgac 48594289  T
Q  162 tatccccctggcataggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatcc 261  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48594288 tatccccctggcataggtgaggtttagcattggaaagctacttttttcccatcatgggaaagttagtttttgaccattagatcaaaccaagaacacatcc 48594189  T
Q  262 ttatcatact 271  Q
    ||||||||||    
T  48594188 ttatcatact 48594179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 48598999 - 48598790
Alignment:
Q  62 aattatatgataatattaatttgtattgcaaataatctaagtaaaataacctcaannnnnnnnnnaagaaatcaaaatggtatatattgaatcaactgac 161  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||          |||||||||||||||||||||||||||||||||||    
T  48598999 aattatatgataatattaatttatattgcaaataatctaagtaaaaaaacctcaattttttttgtaagaaatcaaaatggtatatattgaatcaactgac 48598900  T
Q  162 tatccccctggcataggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatcc 261  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48598899 tatccccctggcataggtgaggtttagcattggaaagctacttttttcccatcatgggaaagttagtttttgaccattagatcaaaccaagaacacatcc 48598800  T
Q  262 ttatcatact 271  Q
    ||||||||||    
T  48598799 ttatcatact 48598790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 62 - 275
Target Start/End: Complemental strand, 48589305 - 48589088
Alignment:
Q  62 aattatatgataatattaatttgtattgcaaataatctaagtaaaataa-cctcaannnnnnnnnnaag-aaatcaaaatggtatatattgaatcaactg 159  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || ||||||          ||  ||||||||||||||||||||||||||||||    
T  48589305 aattatatgataatattagtttgtattgcaaataatctaagtaaaagaaacctcaatttttaaaaaaaataaatcaaaatggtatatattgaatcaactg 48589206  T
Q  160 actatccccctggcataggtgaggtttagcaagggaaagcta--attttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacac 257  Q
    ||||||||||||||||| ||||||||||||| |||||| |||   |||||| | ||||||||||| |||||||| ||| |||| |||||| |||||||||    
T  48589205 actatccccctggcatatgtgaggtttagcatgggaaaactactttttttttctaccatgggaaaattagttttcgacgattagatcaaatcaagaacac 48589106  T
Q  258 atccttatcatacttcat 275  Q
    ||||||||||||||||||    
T  48589105 atccttatcatacttcat 48589088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 2820957 - 2821052
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2820957 aggtgaggtttaacatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatact 2821052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 12800518 - 12800424
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12800518 ggtgaggtttagcatgggaaaactacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatact 12800424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 28371751 - 28371657
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  28371751 ggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaaaaacacatccttatcatact 28371657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 273
Target Start/End: Original strand, 12799989 - 12800085
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatacttc 273  Q
    |||||||||||| | |||||||||| |||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  12799989 ggtgaggtttagtatgggaaagctactttttttctaccatgggaaagttagtttttgaccattagatcaaaccaaaaacacatccttatcatacttc 12800085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 48153205 - 48153113
Alignment:
Q  179 tgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||| |||||||||| ||||||||||  |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  48153205 tgaggtttagcatgggaaagctacttttttcccaatatgggaaagttagtttttgatcattagatcaaaccaagaacacatccttatcatact 48153113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 50164236 - 50164331
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  50164236 aggtgaggtttagcatgggaaaactacttttttcccactatgggaaagttagtttatgaccattagatcaaaccaagaatacatccttatcatact 50164331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 2821537 - 2821443
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||| | | |||| ||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  2821537 ggtgaggtttagtatgagaaaactacttttttcccaccatgggaaagttaatttttgaccattagatcaaaccaagaacacatccttatcatact 2821443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 33631139 - 33631044
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||| ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||| ||||||    
T  33631139 aggtgagatttagcatgggaaaactacttttttcccaccatgggaaaattagtttttgaccattagatcaaacgaagaacacatccttaccatact 33631044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 43756395 - 43756301
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  43756395 ggtgaagtttagcatgggaaagactaattttttcc-accatgggaaagttagtttttaaccattaaatcaaaccaagaacacatccttaccatact 43756301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 50164757 - 50164663
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||| | |||||| ||| |||||| ||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  50164757 ggtgaggtttagtatgggaaaactactttttttccaccataggaaagttagtttttgaccattagatcaaatcaagaacacatccttatcatact 50164663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 28371198 - 28371293
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||| | ||||||| || |||||||| ||||||  ||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  28371198 aggtgaggtttagtatgggaaagttacttttttcctaccatgaaaaagttagtttttgaccattagatcaaaccaagaacacatctttatcatact 28371293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 38469336 - 38469234
Alignment:
Q  174 ataggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatactt 272  Q
    |||||||| |||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||||||     
T  38469336 ataggtgaagtttagcatgggaaaggctaattttttcc-accatgggaaagttagtttttaaccattagatcaaatcaagaacacatccttaccatactc 38469238  T
Q  273 catc 276  Q
    ||||    
T  38469237 catc 38469234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 43755849 - 43755943
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  43755849 ggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 43755943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 38328935 - 38328840
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| ||||||||| |||| ||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||    
T  38328935 aggtgaagtttagcatgggaaagactaattttt-cccatcatgggaaagttagtttttaatcattagatcaaaccaagaacacatccttatcatact 38328840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 17151929 - 17151864
Alignment:
Q  175 taggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccatta 240  Q
    |||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  17151929 taggtgaggtttagcatgggaaagctactttttttccaccatgggaaagttagtttttgaccatta 17151864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 38468904 - 38469000
Alignment:
Q  175 taggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||| || ||| |||||||||||||||| ||||||    
T  38468904 taggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattatattaaatcaagaacacatccttaccatact 38469000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 33630475 - 33630543
Alignment:
Q  175 taggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaat 243  Q
    |||||||||||||||| |||||||||| || ||| ||||||||||||||||||||||||||||||||||    
T  33630475 taggtgaggtttagcatgggaaagctacttattttccaccatgggaaagttagtttttgaccattaaat 33630543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 38328415 - 38328481
Alignment:
Q  205 ttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| | ||||| ||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||    
T  38328415 ttttcctatcatggaaaagttagtttttaaccattagatcaaaccaagaacaaatccttaccatact 38328481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 17151001 - 17151062
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgacca 237  Q
    ||||||||||||||| |||||||     ||||||||||||||||||||||| ||||||||||    
T  17151001 aggtgaggtttagcatgggaaaggctggtttttcccaccatgggaaagttattttttgacca 17151062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 32537672 - 32537707
Alignment:
Q  204 tttttcccaccatgggaaagttagtttttgaccatt 239  Q
    ||||||||||||||||||||||||||||| ||||||    
T  32537672 tttttcccaccatgggaaagttagtttttaaccatt 32537707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 32538550 - 32538488
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccatt 239  Q
    ||||| |||||||| ||||||| ||||||||| |||||||||| ||||||||||||| ||||||    
T  32538550 ggtgaagtttagcatgggaaaggctaattttt-cccaccatggaaaagttagtttttaaccatt 32538488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 232
Target Start/End: Complemental strand, 45065407 - 45065378
Alignment:
Q  203 ttttttcccaccatgggaaagttagttttt 232  Q
    ||||||||||||||||||||||||||||||    
T  45065407 ttttttcccaccatgggaaagttagttttt 45065378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 4e-41; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 28983343 - 28983246
Alignment:
Q  174 ataggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28983343 ataggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatact 28983246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 34717805 - 34717709
Alignment:
Q  175 taggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34717805 taggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatact 34717709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 34717241 - 34717336
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| |||||||||||||    
T  34717241 aggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgatcattagatcaaatcaagaacacgtccttatcatact 34717336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 19062871 - 19062777
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| ||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  19062871 ggtgagctttagcatgggaaagctacttttttcccaccatgagaaagttagtttttgaccattagatcaaaccaaaaacacatccttatcatact 19062777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 28535506 - 28535415
Alignment:
Q  183 gtttagcaagggaaagctaattttttc-ccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatacttc 273  Q
    |||||||| |||||||||| ||||||  ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28535506 gtttagcatgggaaagctacttttttttccaccataggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatacttc 28535415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 7635685 - 7635589
Alignment:
Q  175 taggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  7635685 taggtgaagtttagcatgggaaagactaattttt-cccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 7635589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 28982782 - 28982875
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| |||||| ||| |||||||  | ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  28982782 ggtgaggtttagcatgggaaaactacttttttct-atcatgggaaagttagtttttgaccattcgatcaaaccaagaacacatccttatcatact 28982875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 7635123 - 7635218
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||    
T  7635123 aggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattagatcaaactaagaacacatccttaccatact 7635218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 18290543 - 18290449
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||    
T  18290543 ggtgaagtttagcatgggaaaggctaattttt-cccaccatgggaaagttagtttttaaccattagatcaaaccaagaacaaatccttaccatact 18290449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 2925021 - 2924952
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatca 245  Q
    ||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  2925021 aggtgaggtttagcatgggaaagctacttttttcccaccataggaaagttagtttttgaccattagatca 2924952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 18290214 - 18290309
Alignment:
Q  176 aggtgaggtttagcaagggaaa-gctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| |||||| ||||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| ||||||| ||||||    
T  18290214 aggtgaagtttagcatgggaaaagctaatttt-tcccaccatgggaaagttaatttttaaccattagatcaaaccaagaacaaatccttaccatact 18290309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 4348846 - 4348941
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| | ||||| | | ||||| |||||||  ||||||| |||||| ||||||| ||||||||||||||||||||||| ||||||    
T  4348846 aggtgaagtttagcatgagaaagattaattttttccaccataagaaagtttgtttttaaccattagatcaaaccaagaacacatccttaccatact 4348941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 12999498 - 12999431
Alignment:
Q  204 tttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| | |||||||||||| ||||||| ||||||||||||||| ||||||| ||||||    
T  12999498 tttttcccaccatgagcaagttagtttttaaccattagatcaaaccaagaacatatccttaccatact 12999431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 10608341 - 10608304
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccatta 240  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10608341 ttttttcccaccatgggaaagttagtttttgaccatta 10608304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 14496445 - 14496489
Alignment:
Q  178 gtgaggtttagcaagggaaagctaattttttcccaccatgggaaa 222  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||    
T  14496445 gtgaggtttagcatgggaaagctacttttttctcaccatgggaaa 14496489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 240
Target Start/End: Original strand, 930950 - 930988
Alignment:
Q  203 ttttttcccaccatgggaaa-gttagtttttgaccatta 240  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  930950 ttttttcccaccatgggaaaagttagtttttgaccatta 930988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 18605901 - 18605845
Alignment:
Q  183 gtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccatt 239  Q
    |||||||| ||||||| |||||||||||| |||||||||||||| |||||| ||||||    
T  18605901 gtttagcatgggaaaggctaattttttcc-accatgggaaagtttgtttttaaccatt 18605845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 6e-40; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 20559745 - 20559840
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20559745 aggtgaggtttagcatgggaaagctattttttttccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 20559840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 20560330 - 20560235
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20560330 aggtgaggtttagcatgggaaagctatatttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatact 20560235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 33139774 - 33139868
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| |||||||||| |||||| |||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  33139774 ggtgaggtttagcatgggaaagctactttttttccaccatgagaaagttggtttttgaccattagatcaaaccaagaacacatccttatcatact 33139868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 33140342 - 33140248
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  33140342 ggtgaggtttagtatgggaaagttacttttttcccaccatgggaaagttagtttttgaccattagatcaaactaagaacacatccttatcatact 33140248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 42901185 - 42901090
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||| |  ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||    
T  42901185 aggtgaggtttagcatgaaaaagctatttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacattgttatcatact 42901090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 4179637 - 4179731
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| | |||| ||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||    
T  4179637 ggtgaggtttagcatgagaaaactatttttttcccaccatgggaaagttagtatttgaccattagatcaaaccaagaacacatccttaccatact 4179731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 4180387 - 4180292
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||| || || |||||||  ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||    
T  4180387 aggtgaggtttaacatggaaaagctacatttttcccaccatgggaaagttagtttttgaccattagatcaaactaagaacacatccttaccatact 4180292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 42900647 - 42900741
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| || |||| || ||||||  |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  42900647 ggtgaggtttagcatggaaaaggtacttttttttcaccatgggaaagttagtttttgaccattagatcaaatcaagaacacatccttatcatact 42900741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 40641218 - 40641124
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| ||||||| || ||||||   || |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  40641218 ggtgaggtttagcatgggaaagttactttttttttactatgggaaagttagtttttgaccattagatcaaatcaagaacacatccttatcatact 40641124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 30414179 - 30414275
Alignment:
Q  175 taggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||| |||||| | ||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  30414179 taggtgaagtttagtatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 30414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 25137410 - 25137506
Alignment:
Q  175 taggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||| ||||||    
T  25137410 taggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattagatcaaatcaataacacatccttaccatact 25137506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 35211940 - 35212001
Alignment:
Q  215 atgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatacttcatc 276  Q
    |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  35211940 atggaaaagttagtttttgaccattaaatcaaatcaagaacacattcttatcatacttcatc 35212001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 268
Target Start/End: Original strand, 40640653 - 40640741
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcat 268  Q
    |||||||||||||| ||||||  || |||||||||||   |||||||||||||||| | ||||||||||||||||||||||||| |||||||    
T  40640653 ggtgaggtttagcatgggaaaattacttttttcccac---gggaaagttagtttttaatcattaaatcaaaccaagaacacatcattatcat 40640741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 25137973 - 25137878
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaa-ccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| ||||||||| |||||||||||||| ||||||||| ||||||| |||||| | ||||||||||||||| ||||||    
T  25137973 ggtgaagtttagcatgggaaagactaattttt-cccaccatgggaaaattagtttttaaccattagatcaaatcaaagaacacatccttaccatact 25137878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 33686926 - 33686987
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccat 238  Q
    ||||| |||||||| ||||||| | | ||||||||||||||||||||||||||||| |||||    
T  33686926 ggtgaagtttagcatgggaaaggttaatttttcccaccatgggaaagttagtttttaaccat 33686987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 240
Target Start/End: Original strand, 29006374 - 29006411
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccatta 240  Q
    |||||||||||||||||||||||||||||| |||||||    
T  29006374 ttttttcccaccatgggaaagttagtttttaaccatta 29006411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 29007220 - 29007183
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccatta 240  Q
    |||||||||||||||||||||||||||||| |||||||    
T  29007220 ttttttcccaccatgggaaagttagtttttaaccatta 29007183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 41224865 - 41224828
Alignment:
Q  202 attttttcccaccatgggaaagttagtttttgaccatt 239  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  41224865 attttttcccaccatgggaaagttagtttttaaccatt 41224828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 33687798 - 33687735
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccatt 239  Q
    |||||| |||||||| ||||||| |||||||||||| |||||| |||||||||||||| ||||||    
T  33687798 aggtgaagtttagcatgggaaaggctaattttttcc-accatgagaaagttagtttttaaccatt 33687735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 42607078 - 42607151
Alignment:
Q  174 ataggtgaggtttagcaagggaaagct-aattttttcccaccatgggaaagttagtttttgaccattaaatcaaa 247  Q
    ||||||| ||||||||| |||||||   |||| |||||||||||||||||||| ||||||| |||||| ||||||    
T  42607078 ataggtggggtttagcatgggaaaggggaattgtttcccaccatgggaaagtt-gtttttgtccattagatcaaa 42607151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 35613264 - 35613231
Alignment:
Q  204 tttttcccaccatgggaaagttagtttttgacca 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  35613264 tttttcccaccatggaaaagttagtttttgacca 35613231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 240
Target Start/End: Original strand, 44896073 - 44896110
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccatta 240  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  44896073 tttttccccaccatgggaaagttagtttttaaccatta 44896110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 29314608 - 29314644
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccatt 239  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  29314608 tttttttccaccatgggaaagttagtttttaaccatt 29314644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 930481 - 930387
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  930481 ggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatact 930387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 11442204 - 11442109
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  11442204 aggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaacaaagaacacatccttatcatact 11442109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 929910 - 930005
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  929910 aggtgaggtttagcatgggaaatctacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaataacacatccttatcatact 930005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 21166204 - 21166110
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21166204 ggtgaggtttagcatgggaaagttacttttttcccaccatgggaaaattagtttttgaccattagatcaaaccaagaacacatccttatcatact 21166110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 32473761 - 32473855
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  32473761 ggtgaggtttagcatgggaaagctacttttttcccactatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttattatact 32473855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 178 - 271
Target Start/End: Original strand, 42257215 - 42257308
Alignment:
Q  178 gtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||| |||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42257215 gtgaggtttagcatgggaaaactacttttttcccaccatggaaaagttagtttttgaccattaaatcaaaccaagaacacatctttatcatact 42257308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 32474511 - 32474416
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| ||||||    
T  32474511 aggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaacgaagaacgcatccttaccatact 32474416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 38000334 - 38000244
Alignment:
Q  183 gtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatacttc 273  Q
    |||||||| |||||||||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38000334 gtttagcatgggaaagctgcttttttcccaccatggaaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatacttc 38000244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 175 - 273
Target Start/End: Complemental strand, 14788650 - 14788552
Alignment:
Q  175 taggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatacttc 273  Q
    ||||||||||||| || |||||||||| |||||||| | ||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  14788650 taggtgaggtttaacatgggaaagctacttttttcctatcatgggaaagttagtttttgaccattagatcaaaccaagaagacattcttatcatacttc 14788552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 43521075 - 43521168
Alignment:
Q  175 taggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    ||||||||||||||||||    
T  43521075 taggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaacc---tacacatccttatcatact 43521168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 178 - 271
Target Start/End: Original strand, 50766631 - 50766723
Alignment:
Q  178 gtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  50766631 gtgaggtttagcatgggaaagctacttttttcccaccatgg-aaagttaatttttgaccattagatcaaaccaagaacacattcttatcatact 50766723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 26006829 - 26006732
Alignment:
Q  174 ataggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||| |||||||| ||||||| ||||||||| |||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26006829 ataggtgaagtttagcatgggaaaggctaattttt-cccatcatgagaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatact 26006732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 5113197 - 5113292
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  5113197 aggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 5113292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 11441664 - 11441743
Alignment:
Q  192 gggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||| || ||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11441664 gggaaagttacttttttttcaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatact 11441743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 20586632 - 20586538
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  20586632 ggtgaagtttagcatgggaaaggctaattttt-cccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 20586538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 24394782 - 24394688
Alignment:
Q  177 ggtgaggtttagcaagggaaa-gctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| |||||| |||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  24394782 ggtgaagtttagcatgggaaatgctaattttt-cccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 24394688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 5113759 - 5113662
Alignment:
Q  174 ataggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||| |||||||| ||||||||  | | ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||    
T  5113759 ataggtgaagtttagcatgggaaagcctaatctttcccaccatgggaaagttagtttttaaccattagatcaaaccaagaatacatccttaccatact 5113662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 36992223 - 36992127
Alignment:
Q  175 taggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||| |||||| | ||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  36992223 taggtgaagtttagtatgggaaaggctaattttt-cccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 36992127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 37017663 - 37017567
Alignment:
Q  175 taggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||| |||||| | ||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  37017663 taggtgaagtttagtatgggaaaggctaattttt-cccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 37017567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 20586072 - 20586166
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||||||    
T  20586072 ggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattagatcaaatcaagaacacatccttaccatact 20586166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 45000848 - 45000781
Alignment:
Q  204 tttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  45000848 tttttcccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 45000781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 14788272 - 14788368
Alignment:
Q  175 taggtgaggtttagcaagggaaagctaatttttt-cccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||||| |||||| ||| |||||| |||||||||  ||||||||||||||||||||| | ||||||||||||||||| ||||||||||    
T  14788272 taggtgaggtttagcatgggaaatctactttttttcccaccatga-aaagttagtttttgaccattagaacaaaccaagaacacatctttatcatact 14788368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 24394247 - 24394341
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||| | ||||||| |||||||||||| ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  24394247 ggtgaagtttagtatgggaaagactaattttttcc-accataggaaagttagtttttaaccattagatcaaaccaagaacacatccttagcatact 24394341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 26006146 - 26006240
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||    
T  26006146 ggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattagatcaaactaataacacatccttaccatact 26006240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 271
Target Start/End: Original strand, 45000316 - 45000409
Alignment:
Q  178 gtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||| |||||||| ||||||| ||||||||| ||||| |||||||||||||||||| ||||||| |||||| |||||||||||||||| ||||||    
T  45000316 gtgaagtttagcatgggaaaggctaattttt-cccactatgggaaagttagtttttaaccattagatcaaatcaagaacacatccttaccatact 45000409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 43104826 - 43104731
Alignment:
Q  176 aggtgaggtttagcaagggaaa-gctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| |||||| |||||||||| ||||  |||||||||||||||||| ||||||| ||||||| ||||||||||| ||| ||||||    
T  43104826 aggtgaagtttagcatgggaaatgctaattttt-cccataatgggaaagttagtttttaaccattagatcaaacgaagaacacatctttaccatact 43104731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 50836214 - 50836265
Alignment:
Q  175 taggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagtta 226  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  50836214 taggtgaggtttagcatgggaaagctatttttttcccaccatgggaaagtta 50836265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 50839639 - 50839588
Alignment:
Q  175 taggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagtta 226  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  50839639 taggtgaggtttagcatgggaaagctatttttttcccaccatgggaaagtta 50839588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 42258083 - 42258016
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||| ||| ||||||||||||||||||||||| |||||| ||| ||||||| |||||||||||    
T  42258083 ttttttcccatcattggaaagttagtttttgaccattagatcaaatcaataacacat-cttatcatact 42258016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 24181987 - 24181950
Alignment:
Q  181 aggtttagcaagggaaagctaattttttcccaccatgg 218  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  24181987 aggtttagcatgggaaagctacttttttcccaccatgg 24181950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 174 - 271
Target Start/End: Original strand, 14197656 - 14197753
Alignment:
Q  174 ataggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  14197656 ataggtgaggtttagcatgggaaagttacttttttcccaccatgggaaagttagtttttgaccattagatcaaagcaagaacacatccttatcatact 14197753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 37657847 - 37657941
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  37657847 ggtgaggtttagcatgggaaagctactttttttctaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatctttatcatact 37657941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 39439760 - 39439852
Alignment:
Q  179 tgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||| | || ||||||| |||||||||| ||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  39439760 tgaggtttagtatggaaaagctacttttttcccatcatagaaaagttagtttttgactattagatcaaaccaagaacacatccttatcatact 39439852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 41714603 - 41714695
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcata 269  Q
    |||||||||||||| |||||||||| ||||||  || ||||  ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  41714603 ggtgaggtttagcatgggaaagctatttttttttcatcatgaaaaagttagtttttgatcattagatcaaaccaagaacacatccttatcata 41714695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 30846016 - 30846110
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| |||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  30846016 ggtgaagtttagcatgggaaagactaatttt-tcccaccataggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 30846110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 30846545 - 30846450
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| |||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||| ||||||| ||||||    
T  30846545 aggtgaagtttagcatgggaaaggctaattttttcc-accatgggaaaattagtttttaaccattagatcaaaccaagaacatatccttaccatact 30846450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 39440644 - 39440553
Alignment:
Q  179 tgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||| | |||| ||| |||||||| |||||   |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39440644 tgaggtttagcatgagaaaactacttttttcc-accataaaaaagttagtttttgaccattaaatcaaaccaagaacacatccttataatact 39440553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 31408223 - 31408164
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgacc 236  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  31408223 ggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgacc 31408164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 41715272 - 41715216
Alignment:
Q  220 aaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatacttcatc 276  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  41715272 aaagttagtttttgaccattagatcaaaccaagaacatatccttatcatactccatc 41715216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 42573602 - 42573646
Alignment:
Q  199 ctaattttttcccaccatgggaaagttagtttttgaccattaaat 243  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||    
T  42573602 ctaattttttcccaccatgagaaaattagtttttgaccattaaat 42573646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 37658549 - 37658498
Alignment:
Q  220 aaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||| ||||||| ||||||| |||||||| |||||| ||||||    
T  37658549 aaagttagttttttaccattagatcaaacgaagaacacgtccttaccatact 37658498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 35759260 - 35759223
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccatta 240  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  35759260 tttttccccaccatgggaaagttagtttttaaccatta 35759223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 240
Target Start/End: Original strand, 41348171 - 41348208
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccatta 240  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  41348171 tttttccccaccatgggaaagttagtttttaaccatta 41348208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 41092199 - 41092235
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccatt 239  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  41092199 ttttttcccaccatggaaaagttagtttttaaccatt 41092235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 5620917 - 5620823
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5620917 ggtgaggtttagcatgggaaagttacttttttcccaccatgggaaaattagtttttgaccattagatcaaaccaagaacacatccttatcatact 5620823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 42655791 - 42655692
Alignment:
Q  174 ataggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatacttc 273  Q
    |||||| | |||||||| |||||||||| || ||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  42655791 ataggtcacgtttagcatgggaaagctacttctttcccaccatggaaaaattagtttttgaccattagatcaaaccaataacacatccttatcatacttc 42655692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 12330712 - 12330616
Alignment:
Q  175 taggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  12330712 taggtgaagtttagcatgggaaaggctaattttt-cccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 12330616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 3595776 - 3595871
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  3595776 aggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 3595871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 7858326 - 7858421
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  7858326 aggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 7858421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 8321435 - 8321341
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  8321435 ggtgaagtttagcatgggaaaggctaattttt-cccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 8321341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 12330148 - 12330242
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| |||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  12330148 ggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttaatttttaaccattagatcaaaccaagaacacatccttaccatact 12330242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 16997058 - 16996983
Alignment:
Q  196 aagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||    
T  16997058 aagctacttttttcctaccatgggaaagttagtttttgaccattagatcaaacgaagaacacatccttaccatact 16996983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 29759597 - 29759691
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| |||||||||||| || |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  29759597 ggtgaagtttagcatgggaaagactaattttttcc-actatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 29759691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 3596340 - 3596254
Alignment:
Q  178 gtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatcctta 264  Q
    |||| |||||||| ||||||| ||||||||| |||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  3596340 gtgaagtttagcatgggaaagactaattttt-cccaccatgggaaaattagtttttaaccattagatcaaaccaagaacacatcctta 3596254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 8320875 - 8320969
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||| || ||||||| |||||||||||| ||||||    
T  8320875 ggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattagattaaaccaataacacatccttaccatact 8320969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 24027187 - 24027281
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| |||||||| ||||||||||| ||||||||||||| || |||| ||||||||||||||||||||||| ||||||    
T  24027187 ggtgaagtttagcatgggaaaggctaatttt-tcccaccatggaaaagttagtttttaactattagatcaaaccaagaacacatccttaccatact 24027281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 24027707 - 24027640
Alignment:
Q  204 tttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  24027707 tttttcccatcatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 24027640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 7858869 - 7858773
Alignment:
Q  175 taggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||| ||||| || ||||||| | | |||||   ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  7858869 taggtgaagtttaacatgggaaagattaattttttttaccatgggaaagttagtttttaaccattaaatcaaaccaagaatacatccttaccatact 7858773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 31078455 - 31078520
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaa 241  Q
    |||||| |||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||||    
T  31078455 aggtgaagtttagcatgggaaagactaattttttcc-accatgggaaagttagtttttaaccattaa 31078520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 36912245 - 36912302
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttga 234  Q
    ||||| ||||||||| |||||||   |||||||||||||||||||||||| ||||||||    
T  36912245 aggtggggtttagcatgggaaaggctattttttcccaccatgggaaagtt-gtttttga 36912302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 19860330 - 19860424
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||    
T  19860330 ggtgaggtttagcatgggaaagctatttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatacttaccatact 19860424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 19860921 - 19860826
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  19860921 aggtgaggtttagcatgggaaacctacttttttcccaccgtgggaaagttagtttttgaccattagatcaaaccaagaacacatccttttcatact 19860826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 5235373 - 5235468
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  5235373 aggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttatcatact 5235468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 20174969 - 20175064
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  20174969 aggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttatcatact 20175064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 6934551 - 6934456
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  6934551 aggtgaagtttagcatgggaaagactaattttttcc-accatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 6934456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 263
Target Start/End: Complemental strand, 52532479 - 52532392
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatcctt 263  Q
    |||||||||||| || || ||||||| |||||||||||| | |||||||||||||||||||| || ||||||||||||||||||||||    
T  52532479 aggtgaggtttaacatggaaaagctacttttttcccaccgttggaaagttagtttttgaccagtagatcaaaccaagaacacatcctt 52532392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 6933820 - 6933915
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| |||||||||||| | ||||| ||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  6933820 aggtgaagtttagcatgggaaagactaattttttcc-atcatggaaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 6933915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 52532125 - 52532217
Alignment:
Q  179 tgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||  | |||||||||||||| |||| |||| |||||    
T  52532125 tgaggtttagcatgggaaaactacttttttcccaccatgggaaagtttgtttttgaccagcagatcaaaccaagaacgcatctttattatact 52532217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 5259377 - 5259282
Alignment:
Q  176 aggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||| | |||| ||| ||||||  || |||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||    
T  5259377 aggtgaggtttagcatgagaaaactacttttttttcatcatgggaaagttagttttcgaccattagatcaaatcaagaacacatctttatcatact 5259282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 5235935 - 5235840
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||  ||||||||| || ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  5235935 aggtgaagtttagcatgggaaaaactaattttt-cctaccataggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 5235840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 30213966 - 30213869
Alignment:
Q  174 ataggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| || |||||| ||| |||||| | ||||||  ||||||||||||||||||||| ||||||||||||| | ||  ||||||||||    
T  30213966 ataggtgaggtttatcatgggaaaactactttttttctaccatgaaaaagttagtttttgaccattagatcaaaccaagaatatatttttatcatact 30213869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 46764279 - 46764319
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccattaaat 243  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  46764279 ttttttcccaccatgggaaagttagtttttgaccattaaat 46764319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 240
Target Start/End: Original strand, 11680303 - 11680340
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccatta 240  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11680303 ttttttcccaccatgggaaagttagtttttgaccatta 11680340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 240
Target Start/End: Original strand, 11688582 - 11688619
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccatta 240  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11688582 ttttttcccaccatgggaaagttagtttttgaccatta 11688619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 25655660 - 25655623
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccatta 240  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25655660 ttttttcccaccatgggaaagttagtttttgaccatta 25655623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 31910581 - 31910621
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccattaaat 243  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  31910581 ttttttcccaccatgggaaagttagtttttaaccattaaat 31910621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 240
Target Start/End: Complemental strand, 12590229 - 12590187
Alignment:
Q  198 gctaattttttcccaccatgggaaagttagtttttgaccatta 240  Q
    |||| |||||| |||||||||||||||||||||||||||||||    
T  12590229 gctagtttttttccaccatgggaaagttagtttttgaccatta 12590187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 3167525 - 3167463
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccatt 239  Q
    |||| ||||||||| ||||||| | | ||||||||||||||||||||||  ||||| ||||||    
T  3167525 ggtggggtttagcatgggaaagattactttttcccaccatgggaaagttgttttttaaccatt 3167463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 39412771 - 39412827
Alignment:
Q  183 gtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccatt 239  Q
    |||||||| ||||||| ||||||||| |||| ||||||||||||||||||| ||||||    
T  39412771 gtttagcatgggaaaggctaattttt-cccatcatgggaaagttagtttttaaccatt 39412827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 3847913 - 3847957
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccattaaatcaaa 247  Q
    ||||||||||||||||||||||   ||||||||||||| ||||||    
T  3847913 ttttttcccaccatgggaaagtatttttttgaccattagatcaaa 3847957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 39413670 - 39413607
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccatt 239  Q
    |||||| |||||| | ||||||| ||||||||| |||||||| ||||||||||||||| ||||||    
T  39413670 aggtgaagtttagaatgggaaagactaattttt-cccaccataggaaagttagtttttaaccatt 39413607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 3705337 - 3705431
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  3705337 ggtgaggtttagcataggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccatatcatact 3705431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 16681566 - 16681660
Alignment:
Q  177 ggtgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||| |||||||||| || ||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  16681566 ggtgaggtttagcatgggaaagctagttatttcccatcatgggaaagttagtttttggccattagatcaaaccaagaacacatccttatcatact 16681660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 3705876 - 3705778
Alignment:
Q  175 taggtgaggtttagcaagggaaagctaattttttc--ccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||||||| |||||  ||| ||||||   ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3705876 taggtgaggtttagcatgggaagactactttttttttccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatact 3705778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 7994621 - 7994527
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  7994621 ggtgaagtttagcatgggaaaggctaattttttcc-accatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 7994527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 30899390 - 30899484
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  30899390 ggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 30899484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 15562089 - 15561994
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||||||    
T  15562089 aggtgaagtttagcatgggaaaggctaattttt-cccaccatgggaaagttagtttttaaccattagattaaaccaagaacacatccttaccatact 15561994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 16903946 - 16903851
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||    
T  16903946 aggtgaagtttagcatgggaaaggctaattttt-cccaccatgggaaagttagtttttaaccattagatcaaactaagaacacatccttaccatact 16903851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 16992441 - 16992345
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| ||||||||| | |||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||    
T  16992441 aggtgaagtttagcatgggaaaggctaatttttcctcaccatgggaaagttagtttttaaccattagatcaaactaagaacacatccttaccatact 16992345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 37996632 - 37996537
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| ||||||||| |||| ||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||    
T  37996632 aggtgaagtttagcatgggaaaggctaattttt-cccatcatgggaaagttagtttttaaccattagatcaaatcaagaacacatccttatcatact 37996537  T

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Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 6610091 - 6609997
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||||||    
T  6610091 ggtgaagtttagcatgggaaaggctaattttt-cccaccatgggaaagttagtttttaaccattagattaaaccaagaacacatccttaccatact 6609997  T

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Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 15561540 - 15561635
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| |||||||| ||||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||    
T  15561540 aggtgaagtttagcatgggaaagactaatttt-tcccaccattggaaagttagtttttaaccattagatcaaactaagaacacatccttaccatact 15561635  T

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Target: chr2; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 7994082 - 7994149
Alignment:
Q  204 tttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  7994082 tttttcccatcatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 7994149  T

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Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 30899949 - 30899855
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| ||||||||| |||||||||  ||||||||||||| || |||| ||||||||||||||||||||||| ||||||    
T  30899949 ggtgaagtttagcatgggaaaggctaattttt-cccaccatgaaaaagttagtttttaactattagatcaaaccaagaacacatccttaccatact 30899855  T

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Target: chr2; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 271
Target Start/End: Original strand, 6609552 - 6609645
Alignment:
Q  178 gtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||| |||||||| ||||||| |||||||| ||||||||||| ||||||||||||| ||||||| || ||||||| |||||||||||| ||||||    
T  6609552 gtgaagtttagcatgggaaaggctaatttt-tcccaccatggaaaagttagtttttaaccattagatgaaaccaacaacacatccttaccatact 6609645  T

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Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 16903425 - 16903491
Alignment:
Q  204 tttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||| ||||||    
T  16903425 tttttcccaccatggaaaagttagtttttaaccattagatcaaa-caagaacacatccttaccatact 16903491  T

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Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 16682288 - 16682231
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatc 260  Q
    |||||||||||  ||| |||||||||||||||| |||||||||||| |||||||||||    
T  16682288 ttttttcccacattggcaaagttagtttttgactattaaatcaaacgaagaacacatc 16682231  T

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Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 34617652 - 34617716
Alignment:
Q  176 aggtgaggtttagcaagggaaagc-taattttttcccaccatgggaaagttagtttttgaccatta 240  Q
    ||||| ||||||||| |||||||  ||||| ||||||||||||||||||||| |||||||||||||    
T  34617652 aggtggggtttagcatgggaaaggataattgtttcccaccatgggaaagtta-tttttgaccatta 34617716  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 40992249 - 40992285
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccatt 239  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  40992249 ttttttcctaccatgggaaagttagtttttaaccatt 40992285  T

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Target: scaffold0508 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 174 - 271
Target Start/End: Original strand, 4130 - 4227
Alignment:
Q  174 ataggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  4130 ataggtgaagtttagcatgggaaaggctaatttt-tcccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttaccatact 4227  T

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Target: scaffold0508; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 4672 - 4578
Alignment:
Q  177 ggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||| |||||||| ||||||| |||||||||||| | ||||||||||||||||||| || |||| ||||||||||||||||||||||| ||||||    
T  4672 ggtgaagtttagcatgggaaagactaattttttcc-atcatgggaaagttagtttttaacaattagatcaaaccaagaacacatccttaccatact 4578  T

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Target: scaffold0022 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 61573 - 61668
Alignment:
Q  176 aggtgaggtttagcaagggaaag-ctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||| |||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  61573 aggtgaagtttagcatgggaaaggctaattttt-cccatcatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttctcatact 61668  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 62089 - 62041
Alignment:
Q  223 gttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||| | ||||| |||||||||||| |||||||||| ||||||    
T  62089 gttagttttttagcattagatcaaaccaagatcacatccttaccatact 62041  T

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Target: scaffold0006 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 202304 - 202237
Alignment:
Q  204 tttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  202304 tttttcccaccatggaaaagttagtttttaaccattaaatcaaaccaagaacacatccttaccatact 202237  T

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Target: scaffold0095 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 42977 - 42886
Alignment:
Q  179 tgaggtttagcaagggaaagctaattttttcccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatact 271  Q
    |||||||||||| | |||| ||| |||||||| |||||   |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42977 tgaggtttagcatgagaaaactacttttttcc-accataaaaaagttagtttttgaccattaaatcaaaccaagaacacatccttataatact 42886  T

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Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 22278 - 22203
Alignment:
Q  174 ataggtgaggtttagcaagggaaagctaattttttc-ccaccatgggaaagttagtttttgaccattaaatcaaac 248  Q
    |||||||  |||||||| |||||||||| ||||||  ||||||||||||| || |||||||||||||| |||||||    
T  22278 ataggtggcgtttagcatgggaaagctacttttttttccaccatgggaaaatttgtttttgaccattagatcaaac 22203  T

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Target: scaffold0155 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 17366 - 17402
Alignment:
Q  203 ttttttcccaccatgggaaagttagtttttgaccatt 239  Q
    |||||||||||||||||||||||||||||| ||||||    
T  17366 ttttttcccaccatgggaaagttagtttttaaccatt 17402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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