View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1319_low_57 (Length: 254)

Name: NF1319_low_57
Description: NF1319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1319_low_57
NF1319_low_57
[»] chr7 (93 HSPs)
chr7 (24-254)||(2563809-2564039)
chr7 (24-247)||(3329542-3329766)
chr7 (32-254)||(1848106-1848325)
chr7 (26-254)||(5108559-5108786)
chr7 (25-254)||(16365697-16365926)
chr7 (44-254)||(39273054-39273263)
chr7 (25-228)||(7318265-7318468)
chr7 (35-249)||(8978889-8979103)
chr7 (36-232)||(7492163-7492358)
chr7 (25-241)||(17153045-17153261)
chr7 (27-234)||(3734590-3734796)
chr7 (24-254)||(4785828-4786061)
chr7 (24-242)||(9731517-9731735)
chr7 (26-241)||(10586915-10587130)
chr7 (32-247)||(18368864-18369080)
chr7 (25-131)||(9864327-9864433)
chr7 (32-254)||(20582258-20582476)
chr7 (32-254)||(8053941-8054158)
chr7 (24-254)||(6042452-6042671)
chr7 (32-254)||(13418533-13418742)
chr7 (26-242)||(15869588-15869803)
chr7 (27-254)||(19153292-19153517)
chr7 (27-254)||(20752691-20752916)
chr7 (56-254)||(11803103-11803289)
chr7 (25-254)||(18662433-18662660)
chr7 (55-254)||(16058911-16059099)
chr7 (25-231)||(1584537-1584740)
chr7 (24-254)||(4818828-4819062)
chr7 (25-253)||(31492922-31493145)
chr7 (25-131)||(5530013-5530119)
chr7 (32-149)||(8054471-8054589)
chr7 (24-242)||(17077119-17077324)
chr7 (25-254)||(9130898-9131131)
chr7 (51-234)||(8313291-8313476)
chr7 (35-149)||(13759841-13759957)
chr7 (27-203)||(9574401-9574578)
chr7 (27-244)||(16297722-16297925)
chr7 (25-238)||(1587673-1587884)
chr7 (26-132)||(11221164-11221270)
chr7 (29-131)||(18449238-18449340)
chr7 (25-154)||(12329674-12329802)
chr7 (28-117)||(23099967-23100056)
chr7 (53-254)||(8877441-8877642)
chr7 (175-254)||(7397284-7397362)
chr7 (25-131)||(5797503-5797609)
chr7 (25-131)||(18495365-18495471)
chr7 (28-190)||(12181603-12181767)
chr7 (25-190)||(4986547-4986713)
chr7 (25-190)||(4990645-4990811)
chr7 (24-234)||(2350645-2350855)
chr7 (26-131)||(21230305-21230410)
chr7 (25-131)||(4579090-4579195)
chr7 (27-241)||(6013587-6013800)
chr7 (29-131)||(10937598-10937700)
chr7 (26-131)||(9261197-9261302)
chr7 (26-131)||(10584487-10584592)
chr7 (28-131)||(9500439-9500542)
chr7 (25-132)||(17203016-17203122)
chr7 (29-131)||(9916562-9916664)
chr7 (29-131)||(9924474-9924576)
chr7 (25-131)||(16306686-16306792)
chr7 (157-254)||(17829695-17829789)
chr7 (29-131)||(18466001-18466103)
chr7 (26-131)||(9245174-9245279)
chr7 (169-254)||(13289297-13289382)
chr7 (170-254)||(4449105-4449188)
chr7 (27-131)||(14195974-14196077)
chr7 (25-132)||(10648570-10648677)
chr7 (56-131)||(18467474-18467549)
chr7 (25-131)||(6005829-6005934)
chr7 (55-117)||(13277525-13277587)
chr7 (55-139)||(4449002-4449087)
chr7 (169-250)||(17191096-17191177)
chr7 (27-71)||(1814109-1814153)
chr7 (163-254)||(8293920-8294009)
chr7 (57-237)||(3190957-3191134)
chr7 (26-100)||(7397189-7397262)
chr7 (25-115)||(14755147-14755237)
chr7 (25-87)||(21912525-21912587)
chr7 (62-131)||(22339312-22339381)
chr7 (104-193)||(1584303-1584393)
chr7 (33-89)||(9866584-9866639)
chr7 (33-89)||(18661590-18661646)
chr7 (29-89)||(26134791-26134850)
chr7 (26-132)||(1872778-1872884)
chr7 (55-132)||(17191201-17191279)
chr7 (56-109)||(22067248-22067302)
chr7 (29-87)||(23093306-23093363)
chr7 (26-131)||(1882362-1882467)
chr7 (29-78)||(12391181-12391230)
chr7 (38-87)||(21227184-21227233)
chr7 (25-131)||(21885157-21885259)
chr7 (29-77)||(5047442-5047489)
[»] chr3 (59 HSPs)
chr3 (24-254)||(21301909-21302140)
chr3 (24-254)||(16245608-16245837)
chr3 (28-231)||(3116321-3116522)
chr3 (25-254)||(12805769-12805997)
chr3 (25-242)||(20429702-20429919)
chr3 (24-254)||(41508358-41508587)
chr3 (35-254)||(17438309-17438527)
chr3 (24-242)||(21303245-21303462)
chr3 (51-254)||(4650249-4650446)
chr3 (27-251)||(21325334-21325558)
chr3 (28-254)||(5508331-5508556)
chr3 (25-254)||(12411143-12411368)
chr3 (27-254)||(2167496-2167721)
chr3 (54-250)||(19925504-19925701)
chr3 (51-254)||(932760-932963)
chr3 (24-149)||(19171816-19171942)
chr3 (33-254)||(19908307-19908528)
chr3 (28-234)||(10744897-10745101)
chr3 (169-254)||(16229832-16229917)
chr3 (24-180)||(7478288-7478438)
chr3 (175-254)||(12754801-12754880)
chr3 (169-254)||(8170007-8170092)
chr3 (34-142)||(22349410-22349519)
chr3 (170-254)||(8770145-8770228)
chr3 (27-131)||(10917912-10918016)
chr3 (28-249)||(18736556-18736775)
chr3 (175-251)||(27413778-27413854)
chr3 (51-131)||(8557130-8557210)
chr3 (170-254)||(8765243-8765326)
chr3 (29-89)||(12759383-12759443)
chr3 (27-131)||(21825870-21825973)
chr3 (26-89)||(18458467-18458530)
chr3 (25-131)||(6289895-6290001)
chr3 (25-131)||(31286017-31286121)
chr3 (51-172)||(7495056-7495171)
chr3 (55-132)||(8889152-8889229)
chr3 (27-131)||(821515-821619)
chr3 (29-127)||(28728940-28729038)
chr3 (169-254)||(8883001-8883086)
chr3 (27-149)||(8319034-8319153)
chr3 (169-248)||(19576105-19576184)
chr3 (32-139)||(8770019-8770126)
chr3 (53-139)||(8765137-8765224)
chr3 (26-97)||(13908261-13908331)
chr3 (203-254)||(19909851-19909902)
chr3 (175-254)||(20023431-20023509)
chr3 (157-241)||(2723727-2723808)
chr3 (55-139)||(16229934-16230019)
chr3 (55-142)||(19167433-19167521)
chr3 (160-254)||(8445950-8446041)
chr3 (200-254)||(19171745-19171799)
chr3 (55-139)||(19576200-19576286)
chr3 (185-254)||(8143767-8143833)
chr3 (36-89)||(10923150-10923203)
chr3 (28-77)||(11518016-11518065)
chr3 (25-105)||(7147980-7148059)
chr3 (202-254)||(7494993-7495045)
chr3 (25-89)||(11533018-11533082)
chr3 (170-242)||(19167534-19167605)
[»] chr6 (68 HSPs)
chr6 (25-254)||(27737567-27737796)
chr6 (24-215)||(23143713-23143904)
chr6 (35-254)||(23844343-23844562)
chr6 (51-243)||(22410218-22410408)
chr6 (25-242)||(28933551-28933767)
chr6 (24-254)||(12183209-12183439)
chr6 (28-254)||(14079336-14079548)
chr6 (32-254)||(17826974-17827192)
chr6 (28-254)||(5624635-5624861)
chr6 (34-236)||(9516786-9516988)
chr6 (25-250)||(15466362-15466585)
chr6 (25-131)||(9726014-9726120)
chr6 (25-241)||(21907424-21907642)
chr6 (38-242)||(23645658-23645861)
chr6 (35-254)||(27124373-27124589)
chr6 (24-242)||(21672325-21672543)
chr6 (51-254)||(23231863-23232064)
chr6 (24-242)||(21679741-21679959)
chr6 (25-239)||(22567832-22568044)
chr6 (24-125)||(17729143-17729244)
chr6 (169-254)||(24657347-24657431)
chr6 (26-239)||(4339728-4339940)
chr6 (25-242)||(11176942-11177159)
chr6 (25-243)||(8241269-8241483)
chr6 (38-131)||(17299832-17299925)
chr6 (25-130)||(25927305-25927410)
chr6 (24-156)||(18075365-18075496)
chr6 (25-130)||(7542962-7543067)
chr6 (25-149)||(21688780-21688902)
chr6 (129-254)||(24475153-24475276)
chr6 (57-250)||(9838380-9838572)
chr6 (151-254)||(20005796-20005900)
chr6 (29-84)||(21932100-21932155)
chr6 (178-240)||(17382214-17382275)
chr6 (177-254)||(14637012-14637089)
chr6 (38-131)||(22566163-22566256)
chr6 (25-242)||(8039027-8039238)
chr6 (29-254)||(9898841-9899062)
chr6 (25-136)||(17883780-17883891)
chr6 (27-115)||(19244579-19244667)
chr6 (26-78)||(20145114-20145166)
chr6 (26-78)||(22187673-22187725)
chr6 (170-254)||(25781915-25781998)
chr6 (28-123)||(2586716-2586810)
chr6 (175-254)||(20145000-20145079)
chr6 (175-254)||(22187760-22187839)
chr6 (34-112)||(20005899-20005977)
chr6 (170-254)||(11136033-11136118)
chr6 (55-149)||(23009376-23009471)
chr6 (55-149)||(23778893-23778988)
chr6 (175-241)||(22813612-22813677)
chr6 (55-132)||(22413049-22413126)
chr6 (51-222)||(6630601-6630771)
chr6 (28-128)||(24251511-24251611)
chr6 (175-242)||(22566052-22566118)
chr6 (180-254)||(1635110-1635182)
chr6 (30-74)||(20002440-20002484)
chr6 (170-254)||(21841578-21841661)
chr6 (178-254)||(22412940-22413015)
chr6 (55-149)||(24657436-24657532)
chr6 (34-105)||(9385956-9386026)
chr6 (212-254)||(18075289-18075331)
chr6 (154-232)||(24252131-24252206)
chr6 (29-131)||(28586031-28586133)
chr6 (55-132)||(21841688-21841765)
chr6 (55-132)||(22813709-22813786)
chr6 (29-122)||(28589440-28589533)
chr6 (29-100)||(20722209-20722278)
[»] chr2 (56 HSPs)
chr2 (24-250)||(15339229-15339455)
chr2 (24-254)||(29719110-29719339)
chr2 (27-254)||(17349352-17349569)
chr2 (28-240)||(31804791-31805004)
chr2 (24-254)||(25618548-25618776)
chr2 (32-254)||(27908997-27909219)
chr2 (32-242)||(17743367-17743576)
chr2 (25-242)||(32085455-32085671)
chr2 (24-254)||(26603238-26603458)
chr2 (32-252)||(25196010-25196229)
chr2 (32-254)||(28925521-28925742)
chr2 (27-254)||(20174515-20174740)
chr2 (34-254)||(30411679-30411888)
chr2 (32-254)||(17635653-17635875)
chr2 (32-254)||(17675507-17675730)
chr2 (28-254)||(13776334-13776560)
chr2 (34-231)||(11382654-11382851)
chr2 (24-132)||(25888224-25888328)
chr2 (25-214)||(45621799-45621988)
chr2 (29-131)||(8503071-8503173)
chr2 (25-241)||(23011655-23011869)
chr2 (27-132)||(12953294-12953399)
chr2 (70-235)||(25920303-25920455)
chr2 (55-132)||(25535296-25535373)
chr2 (158-250)||(25887786-25887877)
chr2 (55-132)||(24090926-24091003)
chr2 (169-254)||(25530572-25530656)
chr2 (169-254)||(29143086-29143170)
chr2 (28-132)||(25885460-25885563)
chr2 (27-131)||(28770444-28770548)
chr2 (51-244)||(29027514-29027706)
chr2 (51-132)||(9774335-9774414)
chr2 (55-109)||(25530469-25530523)
chr2 (71-228)||(28606082-28606239)
chr2 (27-131)||(45553124-45553228)
chr2 (29-100)||(8447082-8447152)
chr2 (29-132)||(19200135-19200237)
chr2 (175-254)||(23933424-23933501)
chr2 (168-254)||(17197991-17198077)
chr2 (55-143)||(26667339-26667429)
chr2 (186-251)||(12953225-12953290)
chr2 (56-133)||(27418389-27418466)
chr2 (55-139)||(29142983-29143068)
chr2 (27-131)||(5777211-5777314)
chr2 (203-254)||(26667464-26667515)
chr2 (25-128)||(30900848-30900951)
chr2 (25-131)||(17889929-17890034)
chr2 (169-254)||(25535398-25535482)
chr2 (163-254)||(45553260-45553348)
chr2 (24-78)||(20173352-20173405)
chr2 (73-131)||(21078627-21078685)
chr2 (29-98)||(12557743-12557811)
chr2 (169-234)||(17890074-17890137)
chr2 (27-131)||(5792823-5792926)
chr2 (55-127)||(25939180-25939251)
chr2 (33-89)||(32440040-32440095)
[»] chr8 (47 HSPs)
chr8 (24-254)||(13314870-13315099)
chr8 (24-254)||(24114162-24114390)
chr8 (26-250)||(29382243-29382467)
chr8 (27-254)||(24269592-24269817)
chr8 (25-242)||(25182318-25182535)
chr8 (25-245)||(14528141-14528360)
chr8 (84-248)||(14626081-14626244)
chr8 (35-247)||(17101790-17101990)
chr8 (20-231)||(6884945-6885155)
chr8 (35-241)||(18448433-18448639)
chr8 (27-247)||(34497109-34497329)
chr8 (28-235)||(13697857-13698055)
chr8 (25-228)||(19786723-19786926)
chr8 (56-240)||(27659468-27659642)
chr8 (53-236)||(17509266-17509447)
chr8 (24-254)||(24110548-24110763)
chr8 (25-187)||(30806436-30806604)
chr8 (28-130)||(15238794-15238896)
chr8 (25-131)||(30122156-30122261)
chr8 (38-132)||(2637603-2637697)
chr8 (25-131)||(5850933-5851039)
chr8 (29-131)||(14075590-14075692)
chr8 (39-253)||(44010903-44011116)
chr8 (176-241)||(18569198-18569262)
chr8 (30-131)||(24904630-24904731)
chr8 (51-242)||(21314641-21314832)
chr8 (25-131)||(17976611-17976717)
chr8 (25-231)||(28276660-28276864)
chr8 (29-130)||(31288354-31288454)
chr8 (186-254)||(26394577-26394644)
chr8 (29-100)||(26008019-26008090)
chr8 (38-89)||(30783784-30783835)
chr8 (168-254)||(16404036-16404121)
chr8 (177-235)||(24644984-24645042)
chr8 (34-132)||(25226137-25226235)
chr8 (26-75)||(30235370-30235419)
chr8 (27-131)||(24644832-24644935)
chr8 (27-89)||(5052964-5053026)
chr8 (169-239)||(19264167-19264237)
chr8 (169-231)||(23893115-23893176)
chr8 (175-254)||(9642021-9642098)
chr8 (73-132)||(16403952-16404011)
chr8 (34-105)||(26615269-26615339)
chr8 (55-139)||(19264064-19264149)
chr8 (121-167)||(26394646-26394693)
chr8 (175-254)||(7983724-7983801)
chr8 (53-89)||(24723484-24723520)
[»] chr4 (56 HSPs)
chr4 (28-253)||(13128753-13128978)
chr4 (32-242)||(17216816-17217028)
chr4 (24-254)||(19562053-19562286)
chr4 (33-254)||(13908854-13909075)
chr4 (34-254)||(15164768-15164986)
chr4 (51-254)||(17337013-17337216)
chr4 (35-254)||(7582299-7582518)
chr4 (25-242)||(17671994-17672210)
chr4 (33-254)||(17709757-17709974)
chr4 (27-242)||(14648889-14649103)
chr4 (26-204)||(12578193-12578372)
chr4 (32-216)||(16730316-16730499)
chr4 (34-254)||(19492590-19492798)
chr4 (25-231)||(20829640-20829845)
chr4 (51-254)||(24639339-24639535)
chr4 (25-195)||(11490524-11490694)
chr4 (27-254)||(13692559-13692774)
chr4 (27-242)||(19092289-19092503)
chr4 (26-249)||(40227770-40227992)
chr4 (25-240)||(17951189-17951403)
chr4 (28-204)||(5679200-5679377)
chr4 (25-237)||(17955044-17955255)
chr4 (25-131)||(19882632-19882738)
chr4 (33-131)||(20315000-20315098)
chr4 (30-228)||(19929579-19929777)
chr4 (25-132)||(21323875-21323982)
chr4 (24-129)||(13992879-13992984)
chr4 (30-190)||(22175904-22176064)
chr4 (28-204)||(8969655-8969825)
chr4 (168-254)||(17026222-17026308)
chr4 (25-131)||(25121227-25121332)
chr4 (25-124)||(9737512-9737616)
chr4 (27-234)||(22357430-22357640)
chr4 (26-131)||(11700571-11700675)
chr4 (35-237)||(19636483-19636682)
chr4 (26-124)||(15047121-15047219)
chr4 (26-124)||(15107205-15107303)
chr4 (169-254)||(25097957-25098042)
chr4 (28-132)||(11933414-11933517)
chr4 (34-250)||(26115788-26116001)
chr4 (25-133)||(9052666-9052773)
chr4 (132-254)||(13991968-13992079)
chr4 (175-254)||(25121105-25121182)
chr4 (25-78)||(12318425-12318478)
chr4 (185-254)||(12406581-12406650)
chr4 (29-78)||(19900576-19900624)
chr4 (38-131)||(22526369-22526462)
chr4 (26-131)||(23080334-23080439)
chr4 (25-130)||(3774817-3774923)
chr4 (35-131)||(11521192-11521288)
chr4 (35-118)||(19374827-19374909)
chr4 (55-117)||(25094589-25094652)
chr4 (29-91)||(22218642-22218703)
chr4 (213-254)||(11935237-11935278)
chr4 (169-254)||(25094690-25094775)
chr4 (29-77)||(1833648-1833696)
[»] chr1 (65 HSPs)
chr1 (24-254)||(17359153-17359382)
chr1 (34-249)||(17610139-17610354)
chr1 (26-254)||(9401502-9401726)
chr1 (35-254)||(31235927-31236145)
chr1 (32-247)||(25405516-25405730)
chr1 (32-254)||(15543845-15544066)
chr1 (32-254)||(12208600-12208822)
chr1 (36-247)||(16179010-16179220)
chr1 (53-254)||(21666487-21666687)
chr1 (24-254)||(21449080-21449298)
chr1 (32-242)||(29242518-29242715)
chr1 (32-234)||(14779564-14779766)
chr1 (28-242)||(22664201-22664415)
chr1 (32-254)||(18736130-18736340)
chr1 (26-254)||(13345216-13345442)
chr1 (25-254)||(9787757-9787986)
chr1 (26-254)||(23037889-23038117)
chr1 (28-229)||(51473780-51473978)
chr1 (25-131)||(17837509-17837615)
chr1 (32-254)||(21987872-21988082)
chr1 (28-242)||(24281272-24281484)
chr1 (25-254)||(15813033-15813261)
chr1 (55-254)||(16916824-16917011)
chr1 (53-250)||(22622910-22623107)
chr1 (25-249)||(33190669-33190892)
chr1 (25-131)||(3591654-3591760)
chr1 (28-129)||(21847629-21847729)
chr1 (25-130)||(27117720-27117825)
chr1 (55-254)||(21334596-21334796)
chr1 (27-204)||(147625-147801)
chr1 (25-132)||(16787726-16787833)
chr1 (26-132)||(22620255-22620361)
chr1 (25-131)||(24306307-24306412)
chr1 (174-254)||(16069440-16069519)
chr1 (175-254)||(21973083-21973162)
chr1 (29-131)||(26540892-26540993)
chr1 (169-254)||(14781744-14781829)
chr1 (112-254)||(28008184-28008325)
chr1 (25-254)||(44795361-44795590)
chr1 (32-254)||(18825655-18825864)
chr1 (185-254)||(17121379-17121446)
chr1 (157-241)||(18100905-18100986)
chr1 (51-188)||(24214562-24214700)
chr1 (26-129)||(12012803-12012906)
chr1 (28-83)||(32383047-32383102)
chr1 (187-249)||(25403974-25404036)
chr1 (24-132)||(15813524-15813633)
chr1 (169-254)||(23179921-23180005)
chr1 (55-139)||(24054001-24054085)
chr1 (27-132)||(26648971-26649075)
chr1 (27-103)||(17121509-17121584)
chr1 (175-242)||(18529082-18529148)
chr1 (25-131)||(24267783-24267889)
chr1 (55-132)||(727489-727566)
chr1 (32-117)||(18830481-18830565)
chr1 (146-254)||(12012692-12012799)
chr1 (175-254)||(24054109-24054187)
chr1 (175-254)||(32382887-32382964)
chr1 (55-109)||(14781876-14781930)
chr1 (212-254)||(15813421-15813463)
chr1 (27-65)||(16359865-16359903)
chr1 (55-132)||(23179819-23179897)
chr1 (169-234)||(18830606-18830670)
chr1 (28-77)||(34480964-34481013)
chr1 (170-254)||(727593-727676)
[»] scaffold0001 (2 HSPs)
scaffold0001 (24-254)||(69073-69301)
scaffold0001 (21-117)||(81475-81570)
[»] scaffold0035 (1 HSPs)
scaffold0035 (31-250)||(69911-70129)
[»] scaffold0638 (1 HSPs)
scaffold0638 (51-253)||(701-904)
[»] chr5 (54 HSPs)
chr5 (34-254)||(17431884-17432103)
chr5 (32-206)||(19004153-19004326)
chr5 (34-254)||(24245422-24245642)
chr5 (25-254)||(18208129-18208355)
chr5 (27-149)||(25550487-25550609)
chr5 (35-229)||(34487640-34487832)
chr5 (102-254)||(20744548-20744698)
chr5 (32-254)||(20315308-20315529)
chr5 (32-254)||(34128636-34128856)
chr5 (34-254)||(39434464-39434675)
chr5 (25-204)||(22755513-22755694)
chr5 (25-231)||(18937740-18937945)
chr5 (28-254)||(24266837-24267058)
chr5 (28-254)||(24343468-24343689)
chr5 (32-250)||(24140442-24140652)
chr5 (32-254)||(15375773-15375982)
chr5 (28-190)||(25402278-25402441)
chr5 (168-254)||(20563970-20564056)
chr5 (26-254)||(15690771-15690996)
chr5 (25-254)||(36175126-36175353)
chr5 (25-241)||(19283748-19283962)
chr5 (25-132)||(17171553-17171660)
chr5 (34-132)||(23388838-23388935)
chr5 (25-117)||(15469928-15470020)
chr5 (28-254)||(26120860-26121083)
chr5 (26-131)||(24852173-24852278)
chr5 (29-131)||(23380258-23380360)
chr5 (169-254)||(16523681-16523766)
chr5 (55-132)||(28664796-28664873)
chr5 (55-132)||(17315100-17315177)
chr5 (169-253)||(20549597-20549681)
chr5 (175-254)||(28664904-28664982)
chr5 (29-131)||(17185459-17185561)
chr5 (25-78)||(19086233-19086286)
chr5 (27-131)||(24656854-24656958)
chr5 (179-254)||(26835796-26835869)
chr5 (159-241)||(24260643-24260723)
chr5 (25-128)||(26121328-26121430)
chr5 (70-132)||(20549704-20549766)
chr5 (55-132)||(20858707-20858784)
chr5 (29-97)||(15544047-15544114)
chr5 (24-88)||(19051540-19051604)
chr5 (28-72)||(20419951-20419995)
chr5 (55-131)||(23265176-23265252)
chr5 (55-113)||(20564099-20564158)
chr5 (175-254)||(20858815-20858893)
chr5 (25-116)||(24167600-24167691)
chr5 (25-132)||(26110462-26110568)
chr5 (175-254)||(26121202-26121280)
chr5 (156-204)||(15470062-15470111)
chr5 (32-77)||(20744866-20744911)
chr5 (25-70)||(24662212-24662257)
chr5 (29-105)||(23014637-23014711)
chr5 (80-132)||(24260563-24260615)
[»] scaffold0005 (1 HSPs)
scaffold0005 (27-242)||(168189-168403)
[»] scaffold0024 (1 HSPs)
scaffold0024 (25-241)||(39576-39792)
[»] scaffold0622 (1 HSPs)
scaffold0622 (27-242)||(722-936)
[»] scaffold0155 (1 HSPs)
scaffold0155 (51-254)||(35872-36076)
[»] scaffold0008 (3 HSPs)
scaffold0008 (25-228)||(54852-55056)
scaffold0008 (32-165)||(48162-48290)
scaffold0008 (54-117)||(234362-234425)
[»] scaffold0062 (1 HSPs)
scaffold0062 (55-227)||(43132-43304)
[»] scaffold0102 (1 HSPs)
scaffold0102 (55-250)||(35559-35754)
[»] scaffold1869 (1 HSPs)
scaffold1869 (33-254)||(267-488)
[»] scaffold0957 (2 HSPs)
scaffold0957 (24-119)||(3144-3238)
scaffold0957 (169-241)||(3281-3352)
[»] scaffold0111 (1 HSPs)
scaffold0111 (148-250)||(3749-3851)
[»] scaffold0016 (2 HSPs)
scaffold0016 (34-132)||(3533-3630)
scaffold0016 (29-131)||(12105-12207)
[»] scaffold0671 (2 HSPs)
scaffold0671 (169-254)||(567-651)
scaffold0671 (73-117)||(482-526)
[»] scaffold0043 (1 HSPs)
scaffold0043 (28-242)||(89744-89957)
[»] scaffold0838 (1 HSPs)
scaffold0838 (34-133)||(2371-2470)
[»] scaffold0832 (1 HSPs)
scaffold0832 (34-133)||(2402-2501)
[»] scaffold0650 (1 HSPs)
scaffold0650 (28-131)||(6282-6385)
[»] scaffold0263 (1 HSPs)
scaffold0263 (95-254)||(15708-15867)
[»] scaffold0056 (2 HSPs)
scaffold0056 (56-254)||(21299-21485)
scaffold0056 (169-250)||(25111-25191)
[»] scaffold0054 (2 HSPs)
scaffold0054 (175-254)||(72152-72231)
scaffold0054 (26-78)||(72065-72117)
[»] scaffold0386 (2 HSPs)
scaffold0386 (168-254)||(5983-6069)
scaffold0386 (168-254)||(6593-6679)
[»] scaffold0672 (1 HSPs)
scaffold0672 (25-89)||(1726-1790)
[»] scaffold0048 (1 HSPs)
scaffold0048 (28-131)||(78589-78692)
[»] scaffold0019 (2 HSPs)
scaffold0019 (29-131)||(11236-11338)
scaffold0019 (34-204)||(181633-181803)
[»] scaffold0653 (1 HSPs)
scaffold0653 (26-131)||(4484-4589)
[»] scaffold0042 (1 HSPs)
scaffold0042 (35-132)||(29909-30005)
[»] scaffold0136 (1 HSPs)
scaffold0136 (25-100)||(15497-15572)
[»] scaffold0063 (1 HSPs)
scaffold0063 (25-72)||(51115-51162)
[»] scaffold0034 (2 HSPs)
scaffold0034 (169-254)||(76540-76625)
scaffold0034 (55-132)||(76439-76517)
[»] scaffold0002 (1 HSPs)
scaffold0002 (161-242)||(114618-114697)
[»] scaffold0427 (1 HSPs)
scaffold0427 (69-204)||(2744-2881)
[»] scaffold0006 (2 HSPs)
scaffold0006 (26-84)||(18793-18851)
scaffold0006 (27-84)||(223078-223135)
[»] scaffold0128 (1 HSPs)
scaffold0128 (25-77)||(37413-37465)
[»] scaffold0351 (1 HSPs)
scaffold0351 (175-254)||(5642-5720)
[»] scaffold0238 (1 HSPs)
scaffold0238 (25-75)||(19103-19152)


Alignment Details
Target: chr7 (Bit Score: 148; Significance: 3e-78; HSPs: 93)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 24 - 254
Target Start/End: Original strand, 2563809 - 2564039
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||| ||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||| | |||||||| |||||||||||||||||| |||    
T  2563809 gcggattatgcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatttgtgtt 2563907  T
Q  124 acttattt-tgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| | |||||    
T  2563908 acttatttctgtaagttcacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagagcaagtttacctgctttagtttgca 2564007  T
Q  223 gaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||| ||||||||| || ||||||||    
T  2564008 gaaaagtaagtagcggttaggatccttcgaat 2564039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 3329766 - 3329542
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||| ||||||| ||||||  |||||||||||||||||||||||||||| |||||||||| | |||||||| |||| |||||||||| ||||||    
T  3329766 gcggattaggtaagtgtatcaaattatttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatccaaacaatctgcgtt 3329667  T
Q  124 acttatttt-gtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    ||||||||| ||||||| |   |||||| |||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  3329666 acttatttttgtaagtttaacgtataatgaaagataagggttagagagttgcaatttttatctgtttgcaacatagcaagtttacttgtttttggttgca 3329567  T
Q  223 gaaaagtaagcagcggttagaattc 247  Q
    |||||||||||||||||||| ||||    
T  3329566 gaaaagtaagcagcggttaggattc 3329542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 1848325 - 1848106
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    ||||||||||||||||||  |||||||||||||||||||||||| || ||||||||||   |||||||||||||||||||||||||||||||||||| ||    
T  1848325 ggcaagtgtaccaaattg--taccaagtaataaagtgataagtacagtatcgtatccactgggattgtcctttcgtccaaacaatttgcgttacttattt 1848228  T
Q  131 ttgtaag-ttgacgatataataaaagataagggttagagag-ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaag 228  Q
    ||||||| ||||||||   ||||||  |||||||||||||| ||| |||||||||||||||| |||||| ||||||||| || |||||||||||||||||    
T  1848227 ttgtaagtttgacgat---ataaaaattaagggttagagagcttgcaatttttatctgtttgaaacagagcaagtttacctg-ttttggttgcagaaaag 1848132  T
Q  229 taagcagcggttagaattcttcgaat 254  Q
    |||||||||||||  |||||||||||    
T  1848131 taagcagcggttatgattcttcgaat 1848106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 26 - 254
Target Start/End: Original strand, 5108559 - 5108786
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    ||||| |||||||||||||||||  |||||||||||||||||| ||||||||| |||||||||| | |||||||| |||||||||||||||| |    ||    
T  5108559 ggatttggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgaac-ac 5108656  T
Q  126 ttattttgtaagttgacgatataataaaaga-ta-agggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    ||||||| ||||||||||||||||||||||| || | ||||||||||||  ||||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  5108657 ttatttt-taagttgacgatataataaaagagtatatggttagagagttacaatttttatctgtttgcaagagagcaagtttacttgattttggttgcag 5108755  T
Q  224 aaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||| |||||| ||||    
T  5108756 aaaagtaagcagcggttaggattctttgaat 5108786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 25 - 254
Target Start/End: Original strand, 16365697 - 16365926
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||  ||||||||||||| | ||||||||||||||||| | |||||||| |||||||||| | |||||||| ||| || ||||||||| ||||||    
T  16365697 cggattagaaaagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccacatggattgtcgttttgtgcaaacaattcgcgtta 16365796  T
Q  125 cttattttgtaagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||||| |||||||||||||||||||||||  ||||| ||||||| ||  |||||| |||| |||||| | || |||| |||| ||||||||||||||    
T  16365797 cttatttt-taagttgacgatataataaaagagttaaggtttagagattttcaattttgatctatttgcatctgagcaag-ttacatgtttttggttgca 16365894  T
Q  223 gaaaagtaagcagcggttagaattcttcgaat 254  Q
     ||||||||||||||||||| |||||||||||    
T  16365895 aaaaagtaagcagcggttaggattcttcgaat 16365926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 44 - 254
Target Start/End: Complemental strand, 39273263 - 39273054
Alignment:
Q  44 aaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt-gtaagtt-ga 141  Q
    |||||| |||| ||||||||||||||||||||||| ||||||| |||| |||||||| ||||||||||| |||||| |||||||||||| ||||||| ||    
T  39273263 aaattgtttactaagtaataaagtgataagtagagtatcgtattcatatggattgtcgtttcgtccaaataatttgtgttacttatttttgtaagtttga 39273164  T
Q  142 cgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggtta 241  Q
    ||||||||   ||| ||||||||| | ||||| || ||| |||| ||||||||||| ||||||||| | |||||||||||||||||||||||||||||||    
T  39273163 cgatataa---aagttaagggttataaagttgcaaatttaatctatttgcaacagagcaagtttacctatttttggttgcagaaaagtaagcagcggtta 39273067  T
Q  242 gaattcttcgaat 254  Q
    | || ||||||||    
T  39273066 ggatccttcgaat 39273054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 25 - 228
Target Start/End: Original strand, 7318265 - 7318468
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||||||||||| || | |||||||||||||||||||||||||||| |||||||||| | |||||||| ||||||| |||||  | || |||    
T  7318265 cggattaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacagctcgcatta 7318364  T
Q  125 cttattttgtaagttgacgatat--aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  ||||||||||||||  ||||||  |||||||||||||||| ||| ||||||||||||||||||||||| |||| |||||| ||||||||||    
T  7318365 cttattt--taagttgacgatataaaataaaagagataagggttagaga-ttgcaatttttatctgtttgcaacagagcaag-ttacttctttttggttg 7318460  T
Q  221 cagaaaag 228  Q
    ||||||||    
T  7318461 cagaaaag 7318468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 8979103 - 8978889
Alignment:
Q  35 aagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt-g 133  Q
    |||||||||||||   |||||||||||||||||||||||||||| ||| |||||| | |||||||  |||||||||||||||| || ||||||||||| |    
T  8979103 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaattcgcattacttattttgg 8979004  T
Q  134 taag-ttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaag 232  Q
    |||| ||||| |||||| || | | ||||||||| || ||| |||||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  8979003 taagtttgacaatataa-aagataaaagggttag-gatttgcaattttcatctgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataag 8978906  T
Q  233 cagcggttagaattctt 249  Q
    |||| ||||| ||||||    
T  8978905 cagcagttaggattctt 8978889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 36 - 232
Target Start/End: Complemental strand, 7492358 - 7492163
Alignment:
Q  36 agtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgta 135  Q
    |||||||||||||| ||| | ||||||||| |||||||||||| |||||||||| | |||||||  |||||| |||||||||||| ||||||||||| ||    
T  7492358 agtgtaccaaattg-ttatccagtaataaaatgataagtagagtatcgtatccacaaggattgttgtttcgttcaaacaatttgcattacttatttt-ta 7492261  T
Q  136 agttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaag 232  Q
      |||| ||||||||||||||  ||||||||||||| ||| |||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  7492260 ttttgatgatataataaaagagttaagggttagagatttgcaatttttaactgtttgcaacagagcaag-ttacctgtttttggttgcagaaaagtaag 7492163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 241
Target Start/End: Complemental strand, 17153261 - 17153045
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||  ||||||| ||||| | ||||||||||| |||||||||||||||| |||||||||| |  ||||||| ||||||| |||||  | ||||||    
T  17153261 cggattagaaaagtgtatcaaatagtttaccaagtaagaaagtgataagtagagtatcgtatccacatagattgtcgtttcgtctaaacagctcgcgtta 17153162  T
Q  125 cttattttgtaagttgacg--atataataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  ||||||||||  ||| ||||||  |||||||||||||||| |||  |||||||||||||||||||| | |||| |||| ||||||||||||    
T  17153161 cttattt--taagttgacgacataaaataaaagagataagggttagaga-ttgttatttttatctgtttgcaacaaagcaag-ttacctgtttttggttg 17153066  T
Q  221 cagaaaagtaagcagcggtta 241  Q
    |||||||||||||||||||||    
T  17153065 cagaaaagtaagcagcggtta 17153045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 3734590 - 3734796
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||||||||| |||||||||| | | |||||  ||| ||||||||||||  |||||||    
T  3734590 gattaggtaagtgtaccaaattttttaccaagtaataaagtgataagtagagtatcgtatccacatgaattgttgtttggtccaaacaattcacgttact 3734689  T
Q  127 tattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||  ||||||||||||||  |||||||||  ||||||||| ||| ||| || |||||||||||||||||||| |||| |||| || |||||||||||    
T  3734690 tattt--taagttgacgatataaaataaaagagttaagggttaaaga-ttgcaaattttatctgtttgcaacagagcaag-ttacctg-ttttggttgca 3734784  T
Q  223 gaaaagtaagca 234  Q
    ||||||||||||    
T  3734785 gaaaagtaagca 3734796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 24 - 254
Target Start/End: Original strand, 4785828 - 4786061
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||| ||||||||||||| ||||| | |||||||||||||||||||||||||||| |||  ||||| | |||||||| |||||||||| || ||  ||||    
T  4785828 gcggtttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgtt 4785926  T
Q  124 acttattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaa---tttttatctgtttgcaacagaacaagtttacttgtttttg 216  Q
    ||||||||  | ||||||||||||  |||||||||  ||||||||||||| ||  ||   ||||||||| ||||||| ||| |||| |||| ||||||||    
T  4785927 acttattt--ttagttgacgatataaaataaaagagttaagggttagagatttttaattttttttatctatttgcaatagagcaag-ttacctgtttttg 4786023  T
Q  217 gttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||||||||||||||||||| |||||||||||    
T  4786024 gttgcagaaaagtaagcagcggttaggattcttcgaat 4786061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 242
Target Start/End: Complemental strand, 9731735 - 9731517
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||||||||||||||||| | |||  ||||| ||||||||||||||||| |||||| ||| | |||||||| |||||||||||||||| |||||    
T  9731735 gcggattaggcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgtt 9731636  T
Q  124 acttattttgtaagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    ||||||||| ||  |||| |||| |||||||||  || |  ||||||| ||| ||||||||||| | || |||| | |||| |||| |||||||||||||    
T  9731635 acttatttt-tagtttgatgataaaataaaagagttacgaattagagatttgcaatttttatctatgtgtaacatagcaag-ttacctgtttttggttgc 9731538  T
Q  222 agaaaagtaagcagcggttag 242  Q
    | |||||||||||||||||||    
T  9731537 ataaaagtaagcagcggttag 9731517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 241
Target Start/End: Complemental strand, 10587130 - 10586915
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||| | | |||||||| ||||||| |||||| |   |||||    
T  10587130 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagggattgtcgtttcgtctaaacaactcatgttac 10587031  T
Q  126 ttattttgtaagttgacgatat--aataaaag--ataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    ||||||  |||||| || ||||  ||||||||  |||||||||| ||| ||| ||||||||||||||||||||||| ||||  ||| ||||| |||||||    
T  10587030 ttattt--taagtttacaatataaaataaaagaaataagggttaaaga-ttgcaatttttatctgtttgcaacagagcaag-atacatgtttctggttgc 10586935  T
Q  222 agaaaagtaagcagcggtta 241  Q
    | |||||||||||| |||||    
T  10586934 aaaaaagtaagcagtggtta 10586915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 247
Target Start/End: Complemental strand, 18369080 - 18368864
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||| || ||||||||| |||||||| ||||||||||||||||   |||||||| ||    
T  18369080 ggcaagtgtactaaatagtttaccaagtaataaagtgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaattctagttacttattt 18368981  T
Q  131 ttgtaagttgacgatataataaaagat-aagggttagagagt--tgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaa 227  Q
    || ||||||||| | || ||||||||| |||||||||| |||  || ||||||||||||||||||||| | |||| |||| || ||||||||| ||||||    
T  18368980 ttataagttgac-aaat-ataaaagataaagggttagaaagtcgtgcaatttttatctgtttgcaacaaagcaag-ttacctgcttttggttgtagaaaa 18368884  T
Q  228 gtaagcagcggttagaattc 247  Q
    ||||| | ||||||| ||||    
T  18368883 gtaagaaacggttaggattc 18368864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 9864433 - 9864327
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| | |||||||| ||||||| |||||||||||||||    
T  9864433 cggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtctaaacaatttgcgtta 9864334  T
Q  125 cttattt 131  Q
    |||||||    
T  9864333 cttattt 9864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 32 - 254
Target Start/End: Original strand, 20582258 - 20582476
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    |||||| ||||||||| | ||||||| ||||||||||||||||   | |||||||||| | |||| ||| |||| |||| ||||||  ||||||||| ||    
T  20582258 ggcaagggtaccaaatcgtttaccaattaataaagtgataagt---gtatcgtatccacagggatcgtcgtttcttccatacaattctcgttacttaatt 20582354  T
Q  131 ttgtaagttgacgatataataaaagataagggttagagag--ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaag 228  Q
    || ||||||||||||||||   ||| ||||||||| | ||  ||| ||||||||||| ||||||||||| ||||||||| |||||| |||||||||||||    
T  20582355 ttataagttgacgatataa---aaggtaagggttaaaaagatttgcaatttttatctatttgcaacagagcaagtttacctgtttt-ggttgcagaaaag 20582450  T
Q  229 taagcagcggttagaattcttcgaat 254  Q
    |||||||| ||||| |||||||||||    
T  20582451 taagcagcagttaggattcttcgaat 20582476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 8054158 - 8053941
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    |||||||||||||||| | |||||||||||||||||||||| ||||| |||||||||| | | |||||| ||   |||||||||||  | ||||||| ||    
T  8054158 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataattagagtatcgtatccacatgaattgtcgtt---tccaaacaattctcattacttattt 8054062  T
Q  131 ttgtaagttgacgatataataaaagataagggtt-agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagt 229  Q
    |||||||||||||||   |||||||||||| ||| | ||| ||| || |||||||| ||||||| | | ||||||||| || ||||||||||||||||||    
T  8054061 ttgtaagttgacgat---ataaaagataagagttaaaagacttgtaaattttatctatttgcaatatagcaagtttacctg-ttttggttgcagaaaagt 8053966  T
Q  230 aagcagcggttagaattcttcgaat 254  Q
    ||||||| ||||| |||||| ||||    
T  8053965 aagcagcagttaggattctttgaat 8053941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 254
Target Start/End: Original strand, 6042452 - 6042671
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    ||||||||| |||||||| ||||| | |||||| |||||||| || ||||||||| |||||||||| |  | ||||| |||||| |||||||||||||||    
T  6042452 gcggattagacaagtgtatcaaatcgtttaccatgtaataaaatg-taagtagagtatcgtatccacagaggttgtcgtttcgttcaaacaatttgcgtt 6042550  T
Q  124 acttattttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    ||||||||| ||  |||||| ||||||||||||       ||||  |||| ||||||||| |||||||||||| | |||||||| | |||||||||||||    
T  6042551 acttatttt-tagtttgacggtataataaaaga-------taga-tgttgcaatttttatatgtttgcaacag-agaagtttacctttttttggttgcag 6042640  T
Q  224 aaaagtaagcagcggttagaattcttcgaat 254  Q
    |||| |||||||||||||| |||||| ||||    
T  6042641 aaaaataagcagcggttaggattctttgaat 6042671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 254
Target Start/End: Original strand, 13418533 - 13418742
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaa-gtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-t 129  Q
    |||||||||||||| | | | ||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||| ||  ||||||||| |    
T  13418533 ggcaagtgtaccaa-tcgttaaccaagtaataaaagtgataagtagagtatcgtatccatagggattgtcctttcgtccaaacatttgtcgttacttatt 13418631  T
Q  130 tttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagt 229  Q
    ||| |||||||||| ||||| |          |||||   |||| ||||||||||||||||||||||| ||||||||| || ||||| |||||| |||||    
T  13418632 tttttaagttgacggtataaaa----------gttag---gttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttgattgcagcaaagt 13418717  T
Q  230 aagcagcggttagaattcttcgaat 254  Q
    ||||||||||||| |||||| ||||    
T  13418718 aagcagcggttaggattctttgaat 13418742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 242
Target Start/End: Original strand, 15869588 - 15869803
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    |||||||||||||||| ||||| | |||||||||||||||||||||||||||| |||||||||  | ||||| |  ||| ||| ||| | | ||||||||    
T  15869588 ggattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccgcaaggatttttgttttgtctaaatagtctgcgttac 15869687  T
Q  126 ttattttgtaagttgacgatat--aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    ||||||  ||||||||||||||  ||||||  ||||||||||| |||| ||| || |||||||||||||||| |||| ||| |||| |||||||||||||    
T  15869688 ttattt--taagttgacgatataaaataaaatagataagggtttgaga-ttgcaa-ttttatctgtttgcaatagaaaaag-ttacctgtttttggttgc 15869782  T
Q  222 agaaaagtaagcagcggttag 242  Q
    | |||||||| || |||||||    
T  15869783 ataaaagtaaacaacggttag 15869803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 254
Target Start/End: Original strand, 19153292 - 19153517
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    |||||||||||||||||||||   |||||||||||||||||||||| | ||| |||  ||||  | || ||||| ||| ||||||| || | ||||||||    
T  19153292 gattaggcaagtgtaccaaatcttttaccaagtaataaagtgataaat-gagtatcacatccgcatgg-ttgtcgttttgtccaaataactcgcgttact 19153389  T
Q  127 tattttgtaagttgacgatataataaa-agataagggtta-gagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcaga 224  Q
    ||||||  ||| |||||||| |||||| |||||||||||| | || ||| ||||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  19153390 tatttt--aaggtgacgataaaataaagagataagggttaagggatttgcaatttttatctgtttgcaacataacaag-ttacctgtttttggttgcaga 19153486  T
Q  225 aaagtaagcagcggttaga--attcttcgaat 254  Q
    ||||||| || ||||||||  |||||||||||    
T  19153487 aaagtaa-catcggttagaggattcttcgaat 19153517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 254
Target Start/End: Original strand, 20752691 - 20752916
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    |||||||||||||||||||||   |||||||||||||||||||||| | ||| |||  ||||  | || ||||| ||| ||||||| || | ||||||||    
T  20752691 gattaggcaagtgtaccaaatcttttaccaagtaataaagtgataaat-gagtatcacatccgcatgg-ttgtcgttttgtccaaataactcgcgttact 20752788  T
Q  127 tattttgtaagttgacgatataataaa-agataagggtta-gagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcaga 224  Q
    ||||||  ||| |||||||| |||||| |||||||||||| | || ||| ||||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  20752789 tatttt--aaggtgacgataaaataaagagataagggttaagggatttgcaatttttatctgtttgcaacataacaag-ttacctgtttttggttgcaga 20752885  T
Q  225 aaagtaagcagcggttaga--attcttcgaat 254  Q
    ||||||| || ||||||||  |||||||||||    
T  20752886 aaagtaa-catcggttagaggattcttcgaat 20752916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 56 - 254
Target Start/End: Original strand, 11803103 - 11803289
Alignment:
Q  56 aagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaagttgacgatataataaaa 154  Q
    ||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||||   || |  ||||||    
T  11803103 aagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccaaacaattcgcgttacttatttttgtaagtt--tgacagtataaaa 11803200  T
Q  155 gataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
           |||||   |||||||||||||  ||||||||||||| ||||||||| || ||||||||||||| |||||| |||||||||| ||| |||||||    
T  11803201 -------gttag---gttgaaatttttagttgtttgcaacagagcaagtttacctg-ttttggttgcagagaagtaaccagcggttaggattattcgaat 11803289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 25 - 254
Target Start/End: Original strand, 18662433 - 18662660
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||| ||||||||| ||||| | |||||||| | ||||||||||||||||| |||||||||| | |||||||| ||||||||||||||||  |||||    
T  18662433 cggattaagcaagtgtatcaaatcgtttaccaagcactaaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcacgtta 18662532  T
Q  125 cttattttgtaagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    ||||||| || |    |  ||| |||||||||  | || |||||| | ||| ||||||||| ||||||||||||| |||| |||| || |||||||||||    
T  18662533 cttatttggtgaacaaaatata-aataaaagatttgagagttagata-ttgcaatttttatttgtttgcaacagagcaag-ttacctg-ttttggttgca 18662628  T
Q  223 gaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||| ||||||||||||||| | |||||||||    
T  18662629 gaaatgtaagcagcggttaggactcttcgaat 18662660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 254
Target Start/End: Complemental strand, 16059099 - 16058911
Alignment:
Q  55 caagtaataaagtga-taagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt-gtaagtt-gacgatataata 151  Q
    ||||||||||||| | ||||||||| |||||||||| | ||||||||||||||||||||||||||  |||||||||||| ||||||| |||| ||||| |    
T  16059099 caagtaataaagttagtaagtagagtatcgtatccacatggattgtcctttcgtccaaacaattttagttacttatttttgtaagtttgacggtataaaa 16059000  T
Q  152 aaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcg 251  Q
                  | |||||  ||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  16058999 --------------gtgagtttcaatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagtaaagtaagcagctgttaggattcttcg 16058914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 1584537 - 1584740
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||| |   |||||||||||||||||||||||| ||| |||||||||| | |||||||  ||||||| |||||| | ||||||    
T  1584537 cggattaggcaagtgtaccaa-tcatttaccaagtaataaagtgataagt-gagtatcgtatccacagggattgttgtttcgtctaaacaaatcgcgtta 1584634  T
Q  125 cttattttgtaagttgacgatataat-aaaagataagggtt-agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||||  ||||||||||||| ||| |||||||||||||| ||||| || |||| ||||| ||| |||||||||  ||| ||||  |||||||||||||    
T  1584635 cttattt--taagttgacgataaaataaaaagataagggttaagagatttaaaatatttatatgtctgcaacagagtaag-ttaccagtttttggttgca 1584731  T
Q  223 gaaaagtaa 231  Q
     ||| ||||    
T  1584732 aaaatgtaa 1584740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 254
Target Start/End: Original strand, 4818828 - 4819062
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||| ||||||||||||| ||||| | |||||||||||||||||||||||||||| |||  ||||| | |||||||| |||||||||| || ||  ||||    
T  4818828 gcggtttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgtt 4818926  T
Q  124 acttattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaa---tttttatctgtttgcaacagaacaagtttacttgtttttg 216  Q
    ||||||||  | ||||||||||||  |||||||||  ||||||||||||| ||  ||   |||||||||  |||||| ||| |||| |||| | ||||||    
T  4818927 acttattt--ttagttgacgatataaaataaaagagttaagggttagagatttttaattttttttatct-attgcaatagagcaag-ttacctatttttg 4819022  T
Q  217 gttgcagaaaagtaagca--gcggttagaattcttcgaat 254  Q
    ||||||||||||||||||  |||||||| |||||||||||    
T  4819023 gttgcagaaaagtaagcagcgcggttaggattcttcgaat 4819062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 253
Target Start/End: Original strand, 31492922 - 31493145
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||| ||||||||||| ||||| | |||||| ||||||||||||||||||||| |||||||||| | |||||||| ||| ||||||||||||||  |||    
T  31492922 cggatcaggcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagtatcgtatccacatggattgtcgttttgtccaaacaatttgtttta 31493021  T
Q  125 cttattttgtaagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    ||||||||| ||    |  ||| |||||||||  | ||||||||||   || |||||||||||||||||||||||   || ||||||| ||||||||| |    
T  31493022 cttattttg-aacaataaaata-aataaaagagttgagggttagag---tgcaatttttatctgtttgcaacagagtcag-ttacttg-ttttggttgta 31493114  T
Q  223 gaaaagtaagcagcggttagaattcttcgaa 253  Q
    |||| ||||||| ||||||| ||||||||||    
T  31493115 gaaatgtaagcaacggttaggattcttcgaa 31493145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 5530013 - 5530119
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||| ||||||||||||| ||||||||||||||| ||||||||| || |||||||||| |  |||| || |||||||||||||||||| ||||    
T  5530013 cggattaggcaggtgtaccaaattgtttaccaagtaataaaatgataagtaaagcatcgtatccacagagattttcgtttcgtccaaacaatttgtgtta 5530112  T
Q  125 cttattt 131  Q
    |||||||    
T  5530113 cttattt 5530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 149
Target Start/End: Complemental strand, 8054589 - 8054471
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    |||||||||||||||| | ||||||| |||||||||||||||||||| ||||||| || | | |||||| ||||||||||||||||   |||||||| ||    
T  8054589 ggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttattt 8054490  T
Q  131 ttgtaagttgacgatataa 149  Q
    |||||||||||||||||||    
T  8054489 ttgtaagttgacgatataa 8054471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 242
Target Start/End: Original strand, 17077119 - 17077324
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    ||||||||| ||| |||||||||||| ||| ||| ||||||||||||| |||||| || ||||||||  |||||||| ||||||||||||||||   |||    
T  17077119 gcggattagacaaatgtaccaaattgtttatcaaataataaagtgataggtagagtattgtatccatggggattgtcgtttcgtccaaacaattcatgtt 17077218  T
Q  124 actta-ttttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    ||||| ||||||||||||||| |   ||||||| |          | |||| ||||||||||||||||||| |||  |||||||| || ||||| |||||    
T  17077219 acttatttttgtaagttgacggt---ataaaagtt----------gggttgcaatttttatctgtttgcaatagagtaagtttacctg-ttttgtttgca 17077304  T
Q  223 gaaaagtaagcagcggttag 242  Q
    ||||||||||||||||||||    
T  17077305 gaaaagtaagcagcggttag 17077324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 25 - 254
Target Start/End: Original strand, 9130898 - 9131131
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtat--ccatacggattgtcctttcgtccaaacaatttgcgt 122  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||| |||||| || || ||||  ||| | ||||| || ||||||||||| |||||| |     
T  9130898 cggattaggcaagtgtatcaaattgtttatcaagtaataaagtg-taagtatagtattgtatatccacatggattatcgtttcgtccaaataatttgtga 9130996  T
Q  123 tacttattttgt-aagttgacgatataataaaaga--taaggg-ttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggt 218  Q
    ||||||||| || ||    |  ||| |||||||||  |||||| ||||||| ||| ||||||||| ||||||||| ||| |||||| ||| |||||||||    
T  9130997 tacttatttggttaacaaaatcataaaataaaagagttaaggggttagagatttgcaatttttatttgtttgcaatagagcaagttaact-gtttttggt 9131095  T
Q  219 tgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||| |||||||||| |||||||| |||||||||||    
T  9131096 tgcaaaaaagtaagctgcggttaggattcttcgaat 9131131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 234
Target Start/End: Complemental strand, 8313476 - 8313291
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaaca---atttgcgttacttattttgtaagttgacg--at 145  Q
    |||||||||||||||||||||||||||  |||||||||| | |||||||| ||||||| |||||   | ||| |||||||||||  |||||||| |  ||    
T  8313476 ttaccaagtaataaagtgataagtagattatcgtatccacagggattgtcgtttcgtctaaacaactaattgtgttacttattt--taagttgaaggtat 8313379  T
Q  146 ataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagca 234  Q
    | |||||||||  ||||||||||||| ||| ||||||||||||||| ||||||| ||||||  ||   |||||||||||||||||||||||    
T  8313378 aaaataaaagagttaagggttagaga-ttgcaatttttatctgttttcaacagagcaagttacct--attttggttgcagaaaagtaagca 8313291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 149
Target Start/End: Complemental strand, 13759957 - 13759841
Alignment:
Q  35 aagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttg 133  Q
    ||||||||||||| | ||||||| |||||||||||||||||||| ||| |||||| | |||||||| ||||||||||||| || |||||||||| |||||    
T  13759957 aagtgtaccaaatcgtttaccaattaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtccaaacagttcgcgttacttatttttg 13759858  T
Q  134 taag-ttgacgatataa 149  Q
    |||| ||||||||||||    
T  13759857 taagtttgacgatataa 13759841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 9574401 - 9574578
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    |||||||||||||||| |||| | |||||||| ||||||||||||||||||| |||||||| | |  ||||||  ||||||| |||| | | |||||| |    
T  9574401 gattaggcaagtgtactaaatcgtttaccaaggaataaagtgataagtagagtatcgtatctacagagattgttgtttcgtctaaacgactcgcgttatt 9574500  T
Q  127 tattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagt 203  Q
    |||||  ||||||||||||||  |||||||||  ||||||||||| | ||| ||||||||||||||||||| ||| |||||    
T  9574501 tattt--taagttgacgatataaaataaaagagttaagggttaga-aattgtaatttttatctgtttgcaatagagcaagt 9574578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 244
Target Start/End: Complemental strand, 16297925 - 16297722
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    |||||||||||||||||||||   |||||||||||||| ||||||||||||  ||||||| || | |||||||| ||||||||||||||||  | |||||    
T  16297925 gattaggcaagtgtaccaaataatttaccaagtaataatgtgataagtagattatcgtattcacatggattgtcatttcgtccaaacaattcacattact 16297826  T
Q  127 tattttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaa 226  Q
    ||||||           | | || || || ||||||||||| | ||| ||||||||| |||||||||||||  ||| |||| | ||||||||||||||||    
T  16297825 tatttt-----------aaacaa-aagagttaagggttaga-aattgcaatttttatatgtttgcaacagagtaag-ttacctatttttggttgcagaaa 16297740  T
Q  227 agtaagcagcggttagaa 244  Q
    ||||||||||||||||||    
T  16297739 agtaagcagcggttagaa 16297722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 238
Target Start/End: Original strand, 1587673 - 1587884
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||| |||||||||| | |||| ||||| ||||||||||| ||||| ||| |||| | |  ||| ||  |||| ||||||||||| ||||||    
T  1587673 cggattaggcaaatgtaccaaatcgtttactaagtagtaaagtgataattagagtatcatatctacatagatagttgtttcatccaaacaattcgcgtta 1587772  T
Q  125 cttattttgtaagttgacgatat--aataaaaga-taagggttagagag-ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    | ||||||||   ||||||||||  ||||||||| | |||||||||||| ||| ||||||||| ||||||||||||| ||||||  |    | |||||||    
T  1587773 cctattttgt--tttgacgatataaaataaaagatttagggttagagagattgcaatttttatttgtttgcaacagagcaagttacc----tcttggttg 1587866  T
Q  221 cagaaaagtaagcagcgg 238  Q
    ||||||||||||||||||    
T  1587867 cagaaaagtaagcagcgg 1587884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 11221270 - 11221164
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    |||||| ||||||||||||||| | |||| |||||||||| |||||||||||| || ||||||| | |||||||| ||||||  ||||||||||||||||    
T  11221270 ggattaagcaagtgtaccaaatcgtttactaagtaataaattgataagtagagtattgtatccacagggattgtcgtttcgtgtaaacaatttgcgttac 11221171  T
Q  126 ttatttt 132  Q
    |||||||    
T  11221170 ttatttt 11221164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 18449238 - 18449340
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    ||||||||||||| ||||||| ||||||||||||||||||| ||||| |  |||||||||||| |||||||| ||||  |||||||||| ||||||||||    
T  18449238 ttaggcaagtgtatcaaattgtttaccaagtaataaagtgagaagtataatatcgtatccatagggattgtcgtttcagccaaacaattggcgttactta 18449337  T
Q  129 ttt 131  Q
    |||    
T  18449338 ttt 18449340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 12329674 - 12329802
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||| |||||||||| | ||||||||||| ||| |||||| ||||| || ||||||| | |||||||| ||| | ||||| |||  ||||||    
T  12329674 cggattaggcaaatgtaccaaatcgtttaccaagtaagaaattgataaatagagtatagtatccacaaggattgtcgttttgcccaaataatccgcgtta 12329773  T
Q  125 cttattttgtaagttgacgatataataaaa 154  Q
    |||||||| |||||||||||||||||||||    
T  12329774 cttatttt-taagttgacgatataataaaa 12329802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 23100056 - 23099967
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatt 117  Q
    |||||||||||||||||||| | ||||||| |||||||||||||||||||| |||||||||| |  ||||||| ||||||||||||||||    
T  23100056 attaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatagattgtcgtttcgtccaaacaatt 23099967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 254
Target Start/End: Original strand, 8877441 - 8877642
Alignment:
Q  53 accaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg-taagttgacgatataata 151  Q
    |||||||||||| ||||||||||||| |||||||||| | |||||| ||||| ||| ||||||||  |  ||||||||||  |||||||||  |||||      
T  8877441 accaagtaataaggtgataagtagagtatcgtatccacatggattgcccttttgtcgaaacaattctctgtacttatttttataagttgacagtataa-- 8877538  T
Q  152 aaagataagggttagagag--ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaa-agtaagcagcggttagaattct 248  Q
     ||| ||||||||| | |   ||| ||||||||||||||||||||||| ||||||||| |  ||||||||||| ||| |||||||||||||||| |||||    
T  8877539 -aagttaagggttaaaaaaacttgcaatttttatctgtttgcaacagagcaagtttacct-attttggttgcaaaaatagtaagcagcggttaggattct 8877636  T
Q  249 tcgaat 254  Q
    | ||||    
T  8877637 ttgaat 8877642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 7397284 - 7397362
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||||| ||||||||  || ||||||||||||||||||||||||||||||||| |||||||||||    
T  7397284 aatttttatctgtttgcaacaaaacaagttatct-gtttttggttgcagaaaagtaagcagcggttaggattcttcgaat 7397362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 5797503 - 5797609
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| |||||||||| | | ||||||   ||  |||||||||||| ||||    
T  5797503 cggattaggcaagtgtaacaaatcgcttaccaagtaataaagtaataagtagagtatcgtatccacatgaattgtcaaatcaaccaaacaatttgtgtta 5797602  T
Q  125 cttattt 131  Q
    |||||||    
T  5797603 cttattt 5797609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 18495365 - 18495471
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| ||||||||| |||||| |||| |||||||||||||||||||| || |  ||||||||  |||||||| ||||||| |||||||||| ||||    
T  18495365 cggattagtcaagtgtactaaattgtttactaagtaataaagtgataagtaaagtaatgtatccatggggattgtcgtttcgtctaaacaatttgtgtta 18495464  T
Q  125 cttattt 131  Q
    |||||||    
T  18495465 cttattt 18495471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 12181603 - 12181767
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgt-ccaaacaatttgcgttact 126  Q
    ||||||||||| |||||||| | |||  |||||||||||||| |||||||| | |||||||| | | |||||| |||||| |||||||||| | ||||||    
T  12181603 attaggcaagtataccaaatcgtttataaagtaataaagtgagaagtagagtaccgtatccacatgaattgtcgtttcgtcccaaacaattcgagttact 12181702  T
Q  127 tattttgtaagttgacgatataataaaaga---taagggttagagagttgaaatttttatctgtttg 190  Q
    |||||  ||||||||||||| | |||||||    |||||||||||| ||| |||||||| |||||||    
T  12181703 tattt--taagttgacgataaattaaaagagttgaagggttagagatttgcaatttttacctgtttg 12181767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 190
Target Start/End: Original strand, 4986547 - 4986713
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| |||||||||||||| | |||||||||||||||||| | ||||||| || ||| ||| | |||||||| ||||||| ||| |  | ||||||    
T  4986547 cggattagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgtta 4986646  T
Q  125 cttattttgtaagttgacgatataa--taaaaga--taagggttagagagttgaaatttttatctgtttg 190  Q
    ||||||||  |||||||||||| ||  ||||||   ||||||||||||| ||| ||||||||||||||||    
T  4986647 cttatttt--aagttgacgataaaaaataaaagtgttaagggttagaga-ttgcaatttttatctgtttg 4986713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 190
Target Start/End: Original strand, 4990645 - 4990811
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| |||||||||||||| | |||||||||||||||||| | ||||||| || ||| ||| | |||||||| ||||||| ||| |  | ||||||    
T  4990645 cggattagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgtta 4990744  T
Q  125 cttattttgtaagttgacgatataa--taaaaga--taagggttagagagttgaaatttttatctgtttg 190  Q
    ||||||||  |||||||||||| ||  ||||||   ||||||||||||| ||| ||||||||||||||||    
T  4990745 cttatttt--aagttgacgataaaaaataaaagtgttaagggttagaga-ttgcaatttttatctgtttg 4990811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 234
Target Start/End: Complemental strand, 2350855 - 2350645
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    ||||||||||||||||||||||||   ||||||||||||||| || ||||||||  |||||||||| | |||||||| ||| ||||||| |||  |||||    
T  2350855 gcggattaggcaagtgtaccaaatcatttaccaagtaataaactgctaagtagattatcgtatccacatggattgtcgttttgtccaaataatccgcgtt 2350756  T
Q  124 acttattttgtaagttgacgatataataaaaga---taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |  |||||| ||  |||| |||| ||||||| |    |||||||||||| ||  ||||||||||||||| ||||| | |||  |||| || |||||||||    
T  2350755 aaatatttt-tagtttgaagataaaataaaatagttaaagggttagagattttcaatttttatctgtttacaacacatcaa-attacctg-ttttggttg 2350659  T
Q  221 cagaaaagtaagca 234  Q
    || |||||||||||    
T  2350658 caaaaaagtaagca 2350645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 21230305 - 21230410
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    ||||||||||||| || ||||| | ||||||| ||||||| |||||||||||| ||||||| |||| ||||| || ||||||| || ||||||| |||||    
T  21230305 ggattaggcaagtatatcaaatcgtttaccaaataataaaatgataagtagagtatcgtattcatagggattatcgtttcgtctaagcaatttgtgttac 21230404  T
Q  126 ttattt 131  Q
    ||||||    
T  21230405 ttattt 21230410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 4579090 - 4579195
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||| ||||||||||| |||||| | |||| ||||||||| ||||||||||||| |||||||||| |  ||||||| ||| |||||||||||| | ||||    
T  4579090 cggactaggcaagtgttccaaatcgtttactaagtaataa-gtgataagtagagtatcgtatccaaagagattgtctttttgtccaaacaattcgtgtta 4579188  T
Q  125 cttattt 131  Q
    |||||||    
T  4579189 cttattt 4579195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 241
Target Start/End: Original strand, 6013587 - 6013800
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    |||||||||||||||||||||   ||| |||||| | ||||||||||||||| |||||||||| | ||||| || |||  ||||||||||| || |||||    
T  6013587 gattaggcaagtgtaccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccacaaggattctcattttatccaaacaattggctttact 6013686  T
Q  127 tattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||  ||  |||| |||||  |||||||||   ||||||||| || |  || ||||||| ||||||||||| | ||| ||||| ||  ||||||||||    
T  6013687 tattt--tagtttgatgatataaaataaaagagtaaagggttagcgattgcaattttttatttgtttgcaacaaagcaa-tttacatg--tttggttgca 6013781  T
Q  223 gaaaagtaagcagcggtta 241  Q
    ||||||| |||| ||||||    
T  6013782 gaaaagtgagcaacggtta 6013800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 10937598 - 10937700
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||||| || |||||||||| | |||||||| ||||   |||||||||  | |||||||    
T  10937598 ttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 10937697  T
Q  129 ttt 131  Q
    |||    
T  10937698 ttt 10937700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 9261197 - 9261302
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    ||||||||||| | |||| ||| | ||||||||||| ||| ||||||| |||| |||||||||||| |||||||| ||||||  |||||||||| ||| |    
T  9261197 ggattaggcaactttacctaatcgtttaccaagtaaaaaaatgataagcagagtatcgtatccatatggattgtcatttcgtttaaacaatttgtgttgc 9261296  T
Q  126 ttattt 131  Q
    ||||||    
T  9261297 ttattt 9261302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 10584592 - 10584487
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    ||||||| |||||||||||||| | ||| ||||||||||||||||||| | || |||||||||| | |||||||| |||| |  |||||||| | |||||    
T  10584592 ggattagacaagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagtatcgtatccacatggattgtcgtttcatagaaacaattcgtgttac 10584493  T
Q  126 ttattt 131  Q
    ||||||    
T  10584492 ttattt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 9500439 - 9500542
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    ||||||||||||||| ||||   |||||||||||||| ||||| | ||||| |||||||||| | |||||||  ||||||| |||||||| || ||||||    
T  9500439 attaggcaagtgtacaaaatcatttaccaagtaataatgtgatcattagagtatcgtatccacaaggattgttgtttcgtctaaacaattcgcattactt 9500538  T
Q  128 attt 131  Q
    ||||    
T  9500539 attt 9500542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 17203016 - 17203122
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||| ||||  |||||| |||  |||||||||||| |||||||||| ||||||| ||   |||||||| |||||||||||||||  ||||||    
T  17203016 cggattaggcaaatgtattaaattgtttatgaagtaataaagt-ataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaatccgcgtta 17203114  T
Q  125 cttatttt 132  Q
    ||||||||    
T  17203115 cttatttt 17203122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 9916562 - 9916664
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    |||||||||| ||||||||   |||||| |||||||||| |||||||||| |||||||||| | |||||||  ||||  ||||||||| || ||||||||    
T  9916562 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaatatgtgttactta 9916661  T
Q  129 ttt 131  Q
    |||    
T  9916662 ttt 9916664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 9924474 - 9924576
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    |||||||||| ||||||||   |||||| |||||||||| |||||||||| |||||||||| | |||||||  ||||  ||||||||| || ||||||||    
T  9924474 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaatatgtgttactta 9924573  T
Q  129 ttt 131  Q
    |||    
T  9924574 ttt 9924576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 16306686 - 16306792
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| ||||||||  ||||   ||| |||||||||||||||||||||||| |||||||| | | ||||| || |||| || ||||||||||| |||    
T  16306686 cggattagacaagtgtataaaatcctttaacaagtaataaagtgataagtagagtatcgtatctacaaggattatcatttcatctaaacaatttgcatta 16306785  T
Q  125 cttattt 131  Q
    |||||||    
T  16306786 cttattt 16306792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 17829695 - 17829789
Alignment:
Q  157 taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||| || ||| |||||||||||||||||||||||||||||| |||   ||||||||| |||||| ||||||| |||||  |||||||||||    
T  17829695 taagggttagcga-ttgtaatttttatctgtttgcaacagaacaagttaact--gttttggttggagaaaattaagcagtggttaagattcttcgaat 17829789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 18466001 - 18466103
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    |||||||||  ||||||||   ||| ||| |||||||||||||||||||| | |||||||||| ||||| || ||||  |||||||||||| ||||||||    
T  18466001 ttaggcaaggataccaaatcatttatcaaataataaagtgataagtagagtaacgtatccatagggattctcgtttcagccaaacaatttgtgttactta 18466100  T
Q  129 ttt 131  Q
    |||    
T  18466101 ttt 18466103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 9245174 - 9245279
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    ||||||||||| |||||| ||| | ||||||||||| ||| || |||| |||| |||||||||| | |||||||| ||||||  |||||||| | |||||    
T  9245174 ggattaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttac 9245273  T
Q  126 ttattt 131  Q
    ||||||    
T  9245274 ttattt 9245279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 13289382 - 13289297
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||| ||||||||||| ||  | | ||||| ||||||||||||||||||| |||  |||||||||||||||||||||    
T  13289382 agttgcaatttttttctgtttgcaatagtgcgaatttacctgtttttggttgcagaaaattaataagcggttagaattcttcgaat 13289297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 4449105 - 4449188
Alignment:
Q  170 gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||||||| |||| | | ||||| | |||| ||||||| |||||||| ||||||||||||||||| ||||    
T  4449105 gttgaaatttttatctgtttgcagcagagcgaatttacctatttt-ggttgcaaaaaagtaaacagcggttagaattctttgaat 4449188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 14196077 - 14195974
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||||||||||||||||| | ||| ||| |||||||||| |||||| || | |||||||| | | ||| |  |||||||||||||||| ||||||||    
T  14196077 gattaggcaagtgtaccaaatcgtttatcaaataataaagtg-taagtaaagtaccgtatccacaagaattattgtttcgtccaaacaattcgcgttact 14195979  T
Q  127 tattt 131  Q
    |||||    
T  14195978 tattt 14195974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 10648570 - 10648677
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||| |||  || ||||| | |||||||||||||||||||||| ||||| ||| ||| |  |||||||||| |||| || |||||||| | ||||    
T  10648570 cggattaggaaagcatatcaaatcgtttaccaagtaataaagtgataaatagagtatcatatgcgcacggattgtcgtttcatctaaacaattcgtgtta 10648669  T
Q  125 cttatttt 132  Q
    ||||||||    
T  10648670 cttatttt 10648677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 18467474 - 18467549
Alignment:
Q  56 aagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    |||||||||||||||||||| || || ||||||| | |||||||| ||||||| |||||||||  |||||||||||    
T  18467474 aagtaataaagtgataagtaaagtattgtatccacatggattgtcgtttcgtctaaacaatttatgttacttattt 18467549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 6005829 - 6005934
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||| |||| |||||||||| ||||||| ||||||| || |||  |||| || ||||||| | |||||||| ||| ||||||||||||  |||||    
T  6005829 cggattaggtaagtttaccaaattgtttaccaattaataaattg-taaccagagtattgtatccacatggattgtcgtttggtccaaacaattcacgtta 6005927  T
Q  125 cttattt 131  Q
    |||||||    
T  6005928 cttattt 6005934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 13277525 - 13277587
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatt 117  Q
    ||||||||| |||||||| ||||| |||||||||| | ||||||||||||||||| |||||||    
T  13277525 caagtaatacagtgataaatagagtatcgtatccacatggattgtcctttcgtccgaacaatt 13277587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 4449002 - 4449087
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaagtt 139  Q
    ||||||||||||||||||||| || || ||||||| | ||| |||||||| ||||||||||||   |||||||| |||||||||||    
T  4449002 caagtaataaagtgataagtaaagtattgtatccacagggactgtccttttgtccaaacaattcttgttacttatttttgtaagtt 4449087  T

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Target: chr7; HSP #73
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 17191177 - 17191096
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttc 250  Q
    ||||| ||||||||||||||| ||||||| | | ||||| |||||||||||||||||||| ||| || | |||| |||||||    
T  17191177 agttgcaatttttatctgtttccaacagagcgattttacctgtttttggttgcagaaaagaaagtagtgattaggattcttc 17191096  T

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Target: chr7; HSP #74
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 1814109 - 1814153
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgata 71  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  1814109 gattaggcaagtgtaccaaattatttaccaagtaataaagtgata 1814153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 8294009 - 8293920
Alignment:
Q  163 ttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||| ||| ||||||||||||||||||||||| |||| |||| || ||||||||||||||| ||  |||| |||||| |||||| ||||    
T  8294009 ttagagatttgtaatttttatctgtttgcaacagagcaag-ttacctg-ttttggttgcagaaatgttcgcagtggttaggattctttgaat 8293920  T

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Target: chr7; HSP #76
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 237
Target Start/End: Complemental strand, 3191134 - 3190957
Alignment:
Q  57 agtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacgatataataaaa-- 154  Q
    ||||||||||||| ||||| || ||  |||| ||| |||||||| |||||||||||||||| | |||| ||||||  |||||||| ||||||| | ||      
T  3191134 agtaataaagtgaaaagtaaagtattatatctatagggattgtcgtttcgtccaaacaattcgtgttatttattt--taagttgaggatataaaacaaaa 3191037  T
Q  155 --gataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcg 237  Q
      | |  |||||||||| ||| ||||||||| |||||||||||| |||||||    | | |||||||||||||||||||| ||||    
T  3191036 gggttttgggttagaga-ttgtaatttttatatgtttgcaacag-acaagtt---atctatttggttgcagaaaagtaagtagcg 3190957  T

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Target: chr7; HSP #77
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 7397189 - 7397262
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtc 100  Q
    |||||||| ||||||||||||  | |||||||||||||||||| ||| ||||| |||||||||| | ||||||||    
T  7397189 ggattaggaaagtgtaccaaaccgtttaccaagtaataaagtg-taactagagtatcgtatccacatggattgtc 7397262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 115
Target Start/End: Complemental strand, 14755237 - 14755147
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaa 115  Q
    |||||||| |||||||||||||| | ||| |||||| |||||||| |||||||| ||| |||||| | | |||||  ||||||| ||||||    
T  14755237 cggattagacaagtgtaccaaatcgtttatcaagtagtaaagtgagaagtagagtatcatatccacaagtattgttgtttcgtctaaacaa 14755147  T

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Target: chr7; HSP #79
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 21912587 - 21912525
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatc 87  Q
    ||||| ||||||||||| ||||||| ||| ||| |||||||||||||||| ||| ||||||||    
T  21912587 cggatcaggcaagtgtatcaaattgtttatcaaataataaagtgataagttgagtatcgtatc 21912525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 22339381 - 22339312
Alignment:
Q  62 taaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    |||||||||||||| || |||| ||||  | |||||||| |||||||||||||||| || ||||||||||    
T  22339381 taaagtgataagtaaagtatcgcatccgcaaggattgtcgtttcgtccaaacaattcgccttacttattt 22339312  T

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Target: chr7; HSP #81
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 1584303 - 1584393
Alignment:
Q  104 tcgtccaaacaatttgcgttacttattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaa 193  Q
    ||||||||| |||||||||||||||||||||   ||||||||||  |||||||||  ||| ||||||||| ||| ||||||||||| |||||||    
T  1584303 tcgtccaaataatttgcgttacttattttgt--tttgacgatataaaataaaagagttaaaggttagaga-ttgcaatttttatctttttgcaa 1584393  T

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Target: chr7; HSP #82
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 9866639 - 9866584
Alignment:
Q  33 gcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatcca 89  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||| ||| ||||||    
T  9866639 gcaagtgtaccaaattgtttaccaaataataaagtg-taagtagagtatcatatcca 9866584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 18661590 - 18661646
Alignment:
Q  33 gcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatcca 89  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||| || |||||||    
T  18661590 gcaagtgtaccaaatcgtttaccaaacaataaagtgataagtagagtattgtatcca 18661646  T

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Target: chr7; HSP #84
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 26134850 - 26134791
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatcca 89  Q
    |||| |||||||||||||| | ||||||||||||||| || ||||||||| ||||||||||    
T  26134850 ttagacaagtgtaccaaatcgtttaccaagtaataaaatg-taagtagagtatcgtatcca 26134791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 1872778 - 1872884
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    |||||||||||||||  ||||| | | || |||||||| | |||||||||||| |||||||||| |    ||||| |||| | ||||||||| | |||||    
T  1872778 ggattaggcaagtgtgacaaatcgttcactaagtaatacaatgataagtagagtatcgtatccacataagttgtcgtttcatacaaacaattcgtgttac 1872877  T
Q  126 ttatttt 132  Q
    |||||||    
T  1872878 ttatttt 1872884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 17191279 - 17191201
Alignment:
Q  55 caagtaataaagtga-taagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    ||||||||||||| | ||||||||| |||||||||||| || |||||||||| ||| ||| |||  |||||| ||||||    
T  17191279 caagtaataaagttagtaagtagagtatcgtatccataggggttgtcctttcatccgaacgattctcgttacgtatttt 17191201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 22067302 - 22067248
Alignment:
Q  56 aagtaataaagtga-taagtagagaatcgtatccatacggattgtcctttcgtcc 109  Q
    |||||||||||| | ||||||||| ||| |||||||| |||||||||||||||||    
T  22067302 aagtaataaagttagtaagtagagtatcatatccatagggattgtcctttcgtcc 22067248  T

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Target: chr7; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 23093306 - 23093363
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatc 87  Q
    ||||||||||||||||||| | |||| ||||||||||||| ||||||||| || |||||    
T  23093306 ttaggcaagtgtaccaaatcgtttactaagtaataaagtg-taagtagagtattgtatc 23093363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 1882362 - 1882467
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    |||||||||||||||  ||||| | |||| |||||||| | |||||| ||| | || |||||||||   || ||| |||| |  ||||||||||||||||    
T  1882362 ggattaggcaagtgtgacaaatcgtttactaagtaatacaatgataactagggtattgtatccatataaatggtcgtttcatataaacaatttgcgttac 1882461  T
Q  126 ttattt 131  Q
    ||||||    
T  1882462 ttattt 1882467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 12391181 - 12391230
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagag 78  Q
    ||||||||||||||||||| | ||| ||| ||||||||||||||| ||||    
T  12391181 ttaggcaagtgtaccaaatagtttatcaaataataaagtgataagaagag 12391230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 21227184 - 21227233
Alignment:
Q  38 tgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatc 87  Q
    ||||||||||   |||| ||||||||||||||||||||||| ||||||||    
T  21227184 tgtaccaaatcatttacaaagtaataaagtgataagtagagtatcgtatc 21227233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 21885259 - 21885157
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||||| | |||||||||    |||||||||||| |  ||| ||| ||   |||||||| ||||  ||||||||||  |||||    
T  21885259 cggattaggcaagtgtaccaaatgggttaccaagt----aagtgataagtaaaatatcatattcacgtggattgtcgtttcaaccaaacaattcacgtta 21885164  T
Q  125 cttattt 131  Q
    |||||||    
T  21885163 cttattt 21885157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 5047489 - 5047442
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtaga 77  Q
    |||||||||||||||||||   |||||||||||||||||| ||||||||    
T  5047489 ttaggcaagtgtaccaaatcatttaccaagtaataaagtg-taagtaga 5047442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 24 - 254
Target Start/End: Original strand, 21301909 - 21302140
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| | |||||||| |||||||||||||||| | |||    
T  21301909 gcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttcgtccaaacaattcgagtt 21302008  T
Q  124 acttatttt-gtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    ||||||||| |||| ||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||| | |||||| |||||    
T  21302009 acttatttttgtaaattgacgatataataaaagatatgggttagagtgttggaatttttatctgtttgcaacagagcaagtttacctttttttgattgca 21302108  T
Q  223 gaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||| |||||||||| |||||||||||    
T  21302109 gaaaaataaacagcggttaggattcttcgaat 21302140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 24 - 254
Target Start/End: Complemental strand, 16245837 - 16245608
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    ||||||||| |||||||||||| | | |||||||||||||||||||||||||||| ||| |||||| | ||||| || ||||||||||||||||  ||||    
T  16245837 gcggattagacaagtgtaccaactcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtccaaacaattctcgtt 16245738  T
Q  124 acttattttgtaagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    ||||||||  ||  ||||| ||| |||||||||  ||||||||||||| ||| ||||||||||| ||||||||||| |||| |||| |||||||||||||    
T  16245737 acttattt--tagtttgacaataaaataaaagagttaagggttagagatttgcaatttttatctatttgcaacagagcaag-ttacctgtttttggttgc 16245641  T
Q  222 agaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||||||||||| |||||    
T  16245640 agaaaagtaagcagcggttagaattctccgaat 16245608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 28 - 231
Target Start/End: Complemental strand, 3116522 - 3116321
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||| || ||||||| | |||||||| ||||||||||||||||  ||||||||    
T  3116522 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagt-gagtatagtatccacagggattgtcgtttcgtccaaacaattcacgttactt 3116424  T
Q  128 attttgtaagttgacgatataataaa-agataagggtt-agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaa 225  Q
    ||||  ||||||||||||| |||||| ||||||||||| ||||| ||| ||||||||||||||||||||||| ||||  ||| || ||||||||||||||    
T  3116423 attt--taagttgacgataaaataaagagataagggttaagagatttgcaatttttatctgtttgcaacagagcaag-atacctggttttggttgcagaa 3116327  T
Q  226 aagtaa 231  Q
    ||||||    
T  3116326 aagtaa 3116321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 25 - 254
Target Start/End: Complemental strand, 12805997 - 12805769
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||| ||| |||||| | |||||||| |||| ||||||||||||||||||    
T  12805997 cggattaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatccaaacaatttgcgtta 12805898  T
Q  125 cttattttgtaagttgacg--atataataaaagat--aagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  ||||| ||||  ||| ||||||||||  |||||||||||| ||| |||||||||||||||||||||| | ||  |||| ||  ||||||||    
T  12805897 cttattt--taagtcgacgttataaaataaaagattaaagggttagaga-ttgcaatttttatctgtttgcaacag-agaaaattacctg-atttggttg 12805803  T
Q  221 cagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||| |||||| |||||||||||    
T  12805802 cagaaaagtaagcaggggttaggattcttcgaat 12805769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 25 - 242
Target Start/End: Original strand, 20429702 - 20429919
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||| |||||| |||||| ||||||||||||||| |||||||||||| |||||||| ||| |||||||| |||| |||| |||||| ||||||    
T  20429702 cggattaggcatgtgtactaaattgtttaccaagtaataaaatgataagtagagtatcgtatctataaggattgtcatttcatccacacaattcgcgtta 20429801  T
Q  125 cttattttgtaag-ttgacgatataataaaaga-taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||||| |||| ||||||||||||||||||| |||||||||||   ||| ||||||||| ||||||||||||| |||||||| |   |||||||||||    
T  20429802 cttatttt-taagtttgacgatataataaaagagtaagggttagaagtttgcaatttttatatgtttgcaacagagcaagttta-tctattttggttgca 20429899  T
Q  223 gaaaagtaagcagcggttag 242  Q
    ||||||||| ||| ||||||    
T  20429900 gaaaagtaatcagtggttag 20429919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 24 - 254
Target Start/End: Original strand, 41508358 - 41508587
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||| |||||  ||||||||     |||||||| ||| ||||||||||||||| ||    
T  41508358 gcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataggtagaatatcgtatctgcggggattgtcgtttagtccaaacaatttgcatt 41508457  T
Q  124 acttattttgtaagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    ||||||||| ||| ||||||||| |||||||||  ||||||||||||| ||| ||||| ||||||||||||||| | |||| |||| || ||||||||||    
T  41508458 acttatttt-taatttgacgataaaataaaagagttaagggttagagatttgcaatttgtatctgtttgcaacaaagcaag-ttacatg-ttttggttgc 41508554  T
Q  222 agaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||| |||||||||  |||||| ||||    
T  41508555 agaaaagtaaccagcggttaagattctttgaat 41508587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 35 - 254
Target Start/End: Complemental strand, 17438527 - 17438309
Alignment:
Q  35 aagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt-g 133  Q
    ||||||||||||| | ||||||||| ||||| |||||||||||| ||| |||||| | |||||||| ||||||||||||||||  ||||||||||||| |    
T  17438527 aagtgtaccaaatcg-ttaccaagttataaaatgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttg 17438429  T
Q  134 taagtt-gacgatataataaaagataagggttagagag-ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaa 231  Q
    |||||| ||||||||||||||  |  ||| ||||| || ||| ||||||||||||||||||||||| ||| ||||| |||||| ||||||||||||||||    
T  17438428 taagtttgacgatataataaataa--aggtttagaaagcttgcaatttttatctgtttgcaacagagcaattttacctgtttt-ggttgcagaaaagtaa 17438332  T
Q  232 gcagcggttagaattcttcgaat 254  Q
    ||| ||||||| |||||||||||    
T  17438331 gcaacggttaggattcttcgaat 17438309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 242
Target Start/End: Complemental strand, 21303462 - 21303245
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||| ||||||||| ||||| | ||||||| ||||||| |||||||||||| |||||| ||| |  ||||||  |||| |||||||||||| ||||    
T  21303462 gcggattatgcaagtgtatcaaatcgtttaccaaataataaaatgataagtagagtatcgtagccacaaagattgttgtttcatccaaacaatttccgtt 21303363  T
Q  124 acttattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggtt 219  Q
    ||||||||  ||||||||| ||||  |||||||||   |||||||||||| ||| ||||||||||||||||||||||| |||| ||||||| ||||||||    
T  21303362 acttattt--taagttgactatataaaataaaagagtaaagggttagaga-ttgcaatttttatctgtttgcaacagagcaag-ttacttg-ttttggtt 21303268  T
Q  220 gcagaaaagtaagcagcggttag 242  Q
    |||||||||||||||||||||||    
T  21303267 gcagaaaagtaagcagcggttag 21303245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 254
Target Start/End: Original strand, 4650249 - 4650446
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacgatataat 150  Q
    |||||||||||||||||||| |||| || |||||||||| | |||||||||||||| |||||||||| ||||||||||||    |||||||||||| ||     
T  4650249 ttaccaagtaataaagtgatgagtaaagtatcgtatccacagggattgtcctttcgcccaaacaattcgcgttacttatt----aagttgacgatacaa- 4650343  T
Q  151 aaaagataagggttagagag--ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattct 248  Q
      ||| ||||||||| | ||  ||| |||||||||||||||||||| || ||||||||| |||||| ||||||||||||||||||| ||||||| |||||    
T  4650344 --aagttaagggttaaaaagacttgcaatttttatctgtttgcaacggagcaagtttacctgtttt-ggttgcagaaaagtaagcaacggttaggattct 4650440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 251
Target Start/End: Original strand, 21325334 - 21325558
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||| || |||||||||| |   |||||| |||||||||||||||||| ||||||    
T  21325334 gattaggcaagtgtaccaaattgtttaccaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgttact 21325433  T
Q  127 tattttgtaagttgacgatataa--taaaagat---aagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    ||||||  ||||| |||||||||  |||||||    |||||||||||| ||| ||||||||||| ||||||||||| ||||||  ||    |||||||||    
T  21325434 tatttt--aagttaacgatataaaataaaagagttgaagggttagaga-ttgcaatttttatctatttgcaacagagcaagttacct--aatttggttgc 21325528  T
Q  222 agaaaagtaagcagcggttagaattcttcg 251  Q
    ||||||||||| ||||||||  ||||||||    
T  21325529 agaaaagtaagtagcggttatgattcttcg 21325558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 254
Target Start/End: Original strand, 5508331 - 5508556
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    ||||||||||||||||||||   || ||||||||||||||||||||| ||| ||  |||||| | |||||||| |||||||||||||  | |||||||||    
T  5508331 attaggcaagtgtaccaaatcatttgccaagtaataaagtgataagt-gagtataatatccacatggattgtcgtttcgtccaaacatctcgcgttactt 5508429  T
Q  128 attttgtaagttgacgatataataaa-agataagggtt-agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaa 225  Q
    ||||  |||| |||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||||| ||| |||| |||| ||||||| |||||||||    
T  5508430 attt--taaggtgacgataaaataaagagataagggttaagagatttgaaatttttatctgtttgcaatagagcaag-ttacatgttttttgttgcagaa 5508526  T
Q  226 aagtaagcagcggttaga--attcttcgaat 254  Q
    |||||| ||| |||||||  |||||||||||    
T  5508527 aagtaa-cagtggttagaggattcttcgaat 5508556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 254
Target Start/End: Original strand, 12411143 - 12411368
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||| ||||||| |||||||||| | |||||||| |||||| ||||||||||  ||||    
T  12411143 cggataaggcaagtgtaccaaatcacttaccaagtaataaagtgattagtagagtatcgtatccacaaggattgtcgtttcgtacaaacaatttaggtta 12411242  T
Q  125 ctta-ttttgtaag-ttgacgatataataaaagataaggg-ttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    |||| |||| |||| |||| |||   ||||||| |||||| ||||| | ||| ||||||||  ||||||||||| ||||||||||| ||  |||||||||    
T  12411243 cttatttttctaagtttgatgat---ataaaagttaagggtttagaaatttgcaattttta--tgtttgcaacacaacaagtttacctg--tttggttgc 12411335  T
Q  222 agaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||| ||||||   ||||||| |||||||||||    
T  12411336 agaacagtaagtgacggttaggattcttcgaat 12411368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 254
Target Start/End: Complemental strand, 2167721 - 2167496
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    |||||| |||||||||||||| | |||||||||||||||||||||||||||| |||||||||| |   | |||| ||||||||||||||||  | |||||    
T  2167721 gattagacaagtgtaccaaatcg-ttaccaagtaataaagtgataagtagagtatcgtatccacataaaatgtcgtttcgtccaaacaattcacattact 2167623  T
Q  127 tattttgtaagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcaga 224  Q
    |||||| ||  ||||| ||| |||||||||   || ||||||||| ||| ||||||||||||||||||||| | |||| |||| || |||||||||  ||    
T  2167622 tatttt-tagtttgactataaaataaaagagtaaatggttagagatttgcaatttttatctgtttgcaacataccaag-ttacctg-ttttggttgtgga 2167526  T
Q  225 aaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||| || |||||| |||||||||||    
T  2167525 aaagtaagaagtggttaggattcttcgaat 2167496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 250
Target Start/End: Complemental strand, 19925701 - 19925504
Alignment:
Q  54 ccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg--taagttgacgatataata 151  Q
    ||||||||||| |||||| |||||| |||||||||| | |||||||| ||||||||||| |||| ||||||||||||||   |||||| |||||||||      
T  19925701 ccaagtaataaggtgatatgtagagtatcgtatccacatggattgtcttttcgtccaaataattcgcgttacttatttttattaagttaacgatataa-- 19925604  T
Q  152 aaagataagggtta---gagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattct 248  Q
     ||  |||||||||   |||| ||| |||||| || ||||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||| |||||    
T  19925603 -aatttaagggttaaaagagacttgcaatttt-atatgtttgcaacagagcaagtttacctgttttggtttgcagaaaagtaagcagcggttaggattct 19925506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 254
Target Start/End: Original strand, 932760 - 932963
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg-taagtt-gacgatata 148  Q
    |||| |||||||||| |||||| ||||| |||||||||| |  ||||||||||||||||||| ||||  | |||||||||||  |||||| |||| ||||    
T  932760 ttactaagtaataaattgataaatagagtatcgtatccacagagattgtcctttcgtccaaaaaattcacattacttatttttataagtttgacgttata 932859  T
Q  149 ataaaagataagggtt--agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaatt 246  Q
    |   ||| ||| ||||  | ||| ||  ||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||    
T  932860 a---aagttaaaggtttaaaagacttacaatttttatttgtttgcaacagagcaagtttacttgtttt-ggttgcagaaaagtaagcagcggttagtatt 932955  T
Q  247 cttcgaat 254  Q
    ||||||||    
T  932956 cttcgaat 932963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 19171942 - 19171816
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||||||||| |||| ||| ||| || | |||||||| ||||||||||||||||||| ||    
T  19171942 gcggattaggcaagtatactaaattgtttaccaagtaataaagtgataagcagaggatcatattcacaaggattgtcgtttcgtccaaacaatttgcatt 19171843  T
Q  124 actta-ttttgtaagttgacgatataa 149  Q
    ||||| ||||||| |||||||||||||    
T  19171842 acttatttttgtaggttgacgatataa 19171816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 254
Target Start/End: Original strand, 19908307 - 19908528
Alignment:
Q  33 gcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    ||||||||||||||| | ||||||| ||||||| ||||||||| || |||||||||| | || | ||| ||||||||||||||||  ||| || ||||||    
T  19908307 gcaagtgtaccaaatcgtttaccaaataataaaatgataagtatagtatcgtatccacaagggtcgtcgtttcgtccaaacaattcacgtaacctatttt 19908406  T
Q  133 gt---aagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagt 229  Q
     |   |  ||||||||||||   ||| ||||||||| |   ||| ||||||||| | ||||||||| | ||||||||| | |||||||||||||||||||    
T  19908407 ttttcagtttgacgatataa---aagttaagggttaaaagattggaatttttatttttttgcaacaaagcaagtttacctatttttggttgcagaaaagt 19908503  T
Q  230 aagcagcggttagaattcttcgaat 254  Q
    ||||||| ||||| |||||||||||    
T  19908504 aagcagcagttaggattcttcgaat 19908528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 234
Target Start/End: Original strand, 10744897 - 10745101
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    ||||||||||| |||||||| | |||||||||||||||||||||||||||| ||||| |||||| |||||||| ||||||| |||||| |  | ||| ||    
T  10744897 attaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtttccatagggattgtcgtttcgtctaaacaaatcacattaatt 10744996  T
Q  128 attttgtaagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaa 225  Q
    ||||  |||    |   ||||||||||||  | ||||| ||||| ||| ||||||||||| ||||||||||| |||| |||| || ||||||||||||||    
T  10744997 attt--taaaacaaaattataataaaagagttgagggtaagagatttgcaatttttatctatttgcaacagagcaag-ttacctg-ttttggttgcagaa 10745092  T
Q  226 aagtaagca 234  Q
    | |||||||    
T  10745093 atgtaagca 10745101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 16229917 - 16229832
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||||||||||||||||||| | | ||||| |||||||||||||| ||||||||||||||||||| |||||||||||    
T  16229917 agttgcaatttttatctgtttgcaacagagcgaatttacctgtttttggttgcaaaaaagtaagcagcggttaggattcttcgaat 16229832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 7478438 - 7478288
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||| |||||||||||||||| || ||||||| |||||||||||| | ||     ||||||||| |  ||||||| ||| ||||||||||||  ||||    
T  7478438 gcggatcaggcaagtgtaccaaactgtttaccaaataataaagtgatgacta-----tcgtatccacattgattgtcgtttggtccaaacaattcacgtt 7478344  T
Q  124 acttattttgtaagttgacgatataataaaagataagggttagagagttgaaatttt 180  Q
    ||||||||| || ||||| |||||||||||| ||||||||||||| |||| ||||||    
T  7478343 acttatttttta-gttgatgatataataaaatataagggttagagggttgcaatttt 7478288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 12754880 - 12754801
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||| ||||||||||||| | ||||||| || ||||||||||||||||||||||||||||||| |||||||||||    
T  12754880 aatttttatttgtttgcaacagagctagtttacctggttttggttgcagaaaagtaagcagcggttaggattcttcgaat 12754801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 8170007 - 8170092
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||||||||||||||||| | | | ||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  8170007 agttgtaatttttatctgtttgcaacatagcgaatttacctgtttttggttgcagaaaagtatgcagcggttaggattcttcgaat 8170092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 142
Target Start/End: Original strand, 22349410 - 22349519
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tttt 132  Q
    |||||||||||||| | ||||||| |||||||||||||||||||| |||||||||| |   |||||| ||||||||||||||||  | ||||||| ||||    
T  22349410 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacataaattgtcgtttcgtccaaacaattcacattacttattttt 22349509  T
Q  133 gtaagttgac 142  Q
    ||||||||||    
T  22349510 gtaagttgac 22349519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 8770145 - 8770228
Alignment:
Q  170 gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||| ||||||||| ||||||||||||| ||||||||| |||||| ||||||||||||||||||||| ||||| |||||||||||    
T  8770145 gttgcaatttttatatgtttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagcagcagttaggattcttcgaat 8770228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 10917912 - 10918016
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||||||||| |||||||||| | |||||||  ||||||| ||||| || || ||||     
T  10917912 gattaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatggattgttgtttcgtctaaacagttcgcattacc 10918011  T
Q  127 tattt 131  Q
    |||||    
T  10918012 tattt 10918016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 249
Target Start/End: Complemental strand, 18736775 - 18736556
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    ||||| |||||||||||||| | ||||||||||||||||| |||||||||  |||||||| | | |  ||||| ||||||| |||||| | |||||||||    
T  18736775 attagacaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagaatatcgtatctacaggtgttgtcgtttcgtctaaacaactcgcgttactt 18736677  T
Q  128 attttgtaagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaa 225  Q
    |||||  ||    |   |  |||||||||  ||||||||||||| ||  ||||||||| |||||||||| ||||||||| || |||||| ||||||||||    
T  18736676 attttaaaacagtaaagtg-aataaaagagttaagggttagagatttttaatttttatttgtttgcaaccgaacaagtt-acctgtttt-ggttgcagaa 18736580  T
Q  226 aagtaagcagcggttagaattctt 249  Q
    || |||||||||||||| ||||||    
T  18736579 aaataagcagcggttaggattctt 18736556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 27413854 - 27413778
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcg 251  Q
    ||||||||||||||| ||||||| | | ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  27413854 aatttttatctgttttcaacagagcgattttacctgtttttggttgcagaaaagtaagcagcggttaggattcttcg 27413778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 8557210 - 8557130
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    ||||| |||||||||||||||||||||| |||||||||| | |||||||| |||| |  ||||||||||||||||||||||    
T  8557210 ttaccgagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttattt 8557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 8765243 - 8765326
Alignment:
Q  170 gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||| ||||||||| ||||||||||||| ||||||||| |||||| ||||||||||||||||||||| ||||  |||||||||||    
T  8765243 gttgcaatttttatatgtttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagcagcagttaagattcttcgaat 8765326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 12759383 - 12759443
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatcca 89  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  12759383 ttagacaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgtatcca 12759443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 21825973 - 21825870
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||| ||||||||||||| | ||||| |||||||||||| ||||||||| |||||||||| | ||||| |  ||||||||||||| || ||||||||    
T  21825973 gattaggtaagtgtaccaaatcgtttaccgagtaataaagtg-taagtagagtatcgtatccacatggatttttgtttcgtccaaacagttcgcgttact 21825875  T
Q  127 tattt 131  Q
    |||||    
T  21825874 tattt 21825870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 18458530 - 18458467
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatcca 89  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  18458530 ggattagacaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatcca 18458467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 6289895 - 6290001
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||| |||| ||||| | |||||||||||||||||||||||||||| ||| |||||| | ||||| || ||||||  | |||||| || |||    
T  6289895 cggattaggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtgtagacaattcgcatta 6289994  T
Q  125 cttattt 131  Q
    |||||||    
T  6289995 cttattt 6290001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 31286121 - 31286017
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| ||||||||||||||   |||||||||||||||||| ||| ||||  |||||||||| | |||||||  ||||||||||||||||| |||||    
T  31286121 cggattagacaagtgtaccaaatcatttaccaagtaataaagtg-taactagaatatcgtatccacagggattgt-gtttcgtccaaacaatttccgtta 31286024  T
Q  125 cttattt 131  Q
    |||||||    
T  31286023 cttattt 31286017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 172
Target Start/End: Complemental strand, 7495171 - 7495056
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacgatataat 150  Q
    ||||||| |||||||||||| ||||     ||| ||||| | |||| ||| ||||||||||||||||  ||||||||||||| || ||||| ||||||||    
T  7495171 ttaccaaataataaagtgatgagta-----tcgaatccacatggatcgtcgtttcgtccaaacaattaacgttacttatttttta-gttgatgatataat 7495078  T
Q  151 aaaagataagggttagagagtt 172  Q
    ||||||||||||| ||||||||    
T  7495077 aaaagataagggtcagagagtt 7495056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 8889229 - 8889152
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    |||||||||||||||||||||||| || ||||||| | ||||||||||||||| | |||||||  |||||||||||||    
T  8889229 caagtaataaagtgataagtagagtattgtatccacagggattgtcctttcgttcgaacaattctcgttacttatttt 8889152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 821619 - 821515
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||| ||| || |||||||| | |||||||||||||||||||||||||||| |||||||||| | ||||| || ||||||  ||||||||   ||||||    
T  821619 gattaagcatgtctaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgtttcgtgtaaacaattcatgttact 821520  T
Q  127 tattt 131  Q
    |||||    
T  821519 tattt 821515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 28728940 - 28729038
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    ||||||||||||  |||||   ||| |||||||||||||||||||||||| |||||||||| |  ||||||| ||||  |||||||||| |||||||||    
T  28728940 ttaggcaagtgtgtcaaataatttatcaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaattcgcgttactt 28729038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 8883086 - 8883001
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||||||||||||||||| | | ||||||| | ||||| ||||||||||| ||||| || ||||| |||||||||||    
T  8883086 agttgcaatttttatctgtttgcaacatagcgagtttacctatttttagttgcagaaaattaagctgcagttaggattcttcgaat 8883001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 8319034 - 8319153
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    |||||||||||| |||||| | | |||||||||||| ||||||||||||||  || ||||||| | ||||| || |||||| |||||||||   ||||||    
T  8319034 gattaggcaagtataccaa-tcgtttaccaagtaatgaagtgataagtagaatatagtatccacagggattatcgtttcgtacaaacaattcatgttact 8319132  T
Q  127 tattttgtaagttgacgatataa 149  Q
    |||||  |||||||| |||||||    
T  8319133 tattt--taagttgatgatataa 8319153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 19576184 - 19576105
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattct 248  Q
    ||||| ||||||||||||||||||||| |   | ||||| | |||||||||||||||||| ||||||||||||| |||||    
T  19576184 agttgcaatttttatctgtttgcaacaaagtgaatttacctatttttggttgcagaaaagcaagcagcggttaggattct 19576105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 8770019 - 8770126
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    |||||||||||||| | | | ||||||||||||||||||||||| || ||| |||||| | |||||||||||| |||  |||||||   |||||||| ||    
T  8770019 ggcaagtgtaccaa-tcgttaaccaagtaataaagtgataagtaaagtatcatatccacatggattgtccttttgtctgaacaattcttgttacttagtt 8770117  T
Q  131 ttgtaagtt 139  Q
    |||||||||    
T  8770118 ttgtaagtt 8770126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 8765137 - 8765224
Alignment:
Q  53 accaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaagtt 139  Q
    ||||| ||||||||||||||||| || |||||||||| | |||||||||||| |||  |||||||   |||||||| |||||||||||    
T  8765137 accaattaataaagtgataagtaaagtatcgtatccacatggattgtccttttgtctgaacaattcttgttacttagttttgtaagtt 8765224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 13908331 - 13908261
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggatt 97  Q
    |||||||| |||||||||||||   || ||||||||||||||||||||||||| ||| |||||||| |||||    
T  13908331 ggattaggaaagtgtaccaaatctttt-ccaagtaataaagtgataagtagagtatcatatccatagggatt 13908261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 19909902 - 19909851
Alignment:
Q  203 tttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||||| ||||    
T  19909902 tttacctgttttttgttgcagaaaagtaagcagcggttaggattctttgaat 19909851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 20023509 - 20023431
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||||||| | | |||||  ||||| ||||||||||||||||| ||| ||||| |||||| ||||    
T  20023509 aatttttatctgtttgcaacagagcgaatttaccagtttt-ggttgcagaaaagtaagtagcagttaggattctttgaat 20023431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 2723808 - 2723727
Alignment:
Q  157 taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggtta 241  Q
    ||||||||||| | |  |||||||||||||||||||||| | |||||| || |||||  ||||||| ||||||||||||||||||    
T  2723808 taagggttagatattgcaaatttttatctgtttgcaacaaagcaagtt-acctgttt--ggttgcaaaaaagtaagcagcggtta 2723727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 16230019 - 16229934
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaagtt 139  Q
    |||||||||||||  ||||||||| |||||||||| | |||||||||||| ||||  ||||||   |||||||| |||||||||||    
T  16230019 caagtaataaagtagtaagtagagtatcgtatccacagggattgtccttttgtccttacaattctagttacttatttttgtaagtt 16229934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 19167433 - 19167521
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaagttgac 142  Q
    ||||||| |||||  ||| ||||| |||||||||| | ||||| ||||||||||| |||||||   |||||||| ||||||||||||||    
T  19167433 caagtaagaaagttgtaaatagagtatcgtatccacatggattatcctttcgtccgaacaattctagttacttatttttgtaagttgac 19167521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 8445950 - 8446041
Alignment:
Q  160 gggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||  ||     ||||||||||||| |||||||| |||||| |||||| ||||    
T  8445950 gggttagaga-ttgcaatttttatcagtttgcaacagaacaagttacct--ccattggttgcagaaatgtaagcagtggttaggattctttgaat 8446041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 19171799 - 19171745
Alignment:
Q  200 aagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||  ||||||| |||||||||||||| |||| |||||| |||||||||||    
T  19171799 aagtttatctgttttttgttgcagaaaagtatgcagtggttaggattcttcgaat 19171745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 19576286 - 19576200
Alignment:
Q  55 caagtaataaagtga-taagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaagtt 139  Q
    ||||||||||||| | | || |||| |||||||||| | ||||||||||||||||| |||||||   |||||||| |||||||||||    
T  19576286 caagtaataaagttagtgaggagagtatcgtatccagatggattgtcctttcgtccgaacaattctagttacttacttttgtaagtt 19576200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 8143767 - 8143833
Alignment:
Q  185 tgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||||||||||| |||| || |||||||||||| |||||||||| ||||||| |||||| ||||    
T  8143767 tgtttgcaacagaacaag-ttacctg-ttttggttgcag-aaagtaagcaacggttaggattcttggaat 8143833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 10923150 - 10923203
Alignment:
Q  36 agtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatcca 89  Q
    ||||||||||||   |||||||||||||||||||||| || || ||||||||||    
T  10923150 agtgtaccaaatcatttaccaagtaataaagtgataattacagtatcgtatcca 10923203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 11518065 - 11518016
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtaga 77  Q
    |||| ||||||||||||||| | | | |||||||||||||||||||||||    
T  11518065 attaagcaagtgtaccaaatcgttcatcaagtaataaagtgataagtaga 11518016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 7147980 - 7148059
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttc 105  Q
    |||||||||||| |||||||||| | |||||||||| ||||   |||||||||| ||||| |||| | |||||||| ||||    
T  7147980 cggattaggcaaatgtaccaaatcgtttaccaagtactaaa-aaataagtagagtatcgtctccacatggattgtcgtttc 7148059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 7495045 - 7494993
Alignment:
Q  202 gtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||| |||||||||||| |||||||||||||| | |||| ||| |||||||    
T  7495045 gtttacctgtttttggttgtagaaaagtaagcagggattaggattattcgaat 7494993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 11533082 - 11533018
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatcca 89  Q
    |||||||  |||||||||||||    ||||||| |||||||||||||||||||| | ||||||||    
T  11533082 cggattaaacaagtgtaccaaaacatttaccaaataataaagtgataagtagagtaccgtatcca 11533018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 19167534 - 19167605
Alignment:
Q  170 gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttag 242  Q
    |||| ||||||||||||||||||| | | | | ||||| | ||||||||||||| |||||||||| |||||||    
T  19167534 gttgcaatttttatctgtttgcaataaagcgaatttacctatttttggttgcag-aaagtaagcaacggttag 19167605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 3e-75; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 25 - 254
Target Start/End: Complemental strand, 27737796 - 27737567
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||||||||| |||| | |||||||||||||||||||||||||||| ||| || ||| | |||||||  |||||||||||||||| ||||||    
T  27737796 cggattaggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgtta 27737697  T
Q  125 cttatttt-gtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||     
T  27737696 cttatttttgtaagttgacgataaaatgaaagataagggttagagagttgcaatttttatctgtttgcaacagagcaagtttacctgttttt-gttgcaa 27737598  T
Q  224 aaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||| |||||||||||    
T  27737597 aaaagtaagcagcggttaggattcttcgaat 27737567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 24 - 215
Target Start/End: Original strand, 23143713 - 23143904
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    ||||||||||||||||||||||||   ||||||| |||||||||||||||||||| ||| |||||| | |||||||| ||||||||||||||||   |||    
T  23143713 gcggattaggcaagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaaacaattcatgtt 23143812  T
Q  124 acttattttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgttttt 215  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||||| ||||||| ||| |||||    
T  23143813 acttattttgtaagttgacgatataataaaagataaaggttagagagtttcaatttttatctgtttacaacagatcaagtttgctttttttt 23143904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 35 - 254
Target Start/End: Complemental strand, 23844562 - 23844343
Alignment:
Q  35 aagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttg 133  Q
    ||||||||||||| | ||||||||||||||| |||||||||||| ||| |||| | | |||||||| |||||||||||||| | |||||||||| |||||    
T  23844562 aagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtatcatatctaaagggattgtcgtttcgtccaaacaactcgcgttacttatttttg 23844463  T
Q  134 taagttgacgatataataaaagataagggttagaga-gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaag 232  Q
    |||||||||||||||| || | | |||||||||| | |||| ||||||||||||||||||| ||| ||||||||| || ||||||||||| |||||||||    
T  23844462 taagttgacgatataa-aagataaaagggttagaaatgttgcaatttttatctgtttgcaatagaccaagtttacctg-ttttggttgcataaaagtaag 23844365  T
Q  233 cagcggttagaattcttcgaat 254  Q
    |||||||||| ||| |||||||    
T  23844364 cagcggttaggatttttcgaat 23844343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 51 - 243
Target Start/End: Complemental strand, 22410408 - 22410218
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacgatataat 150  Q
    ||||||||||||||| |||||||||||| |||||||||| | |||||||| |||| | |||||||||  ||||||||||||| |||||||||||||||||    
T  22410408 ttaccaagtaataaaatgataagtagagtatcgtatccacagggattgtcgtttcattcaaacaattcacgttacttatttt-taagttgacgatataat 22410310  T
Q  151 aaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttaga 243  Q
    |||||||||||||||||   ||| ||||||||||||||||||||||| ||||||| | | ||||||||||||| |||| ||||||||| ||||    
T  22410309 aaaagataagggttagaatcttgcaatttttatctgtttgcaacagagcaagttttcctatttttggttgcag-aaaggaagcagcggctaga 22410218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 242
Target Start/End: Complemental strand, 28933767 - 28933551
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||| |||||||||| |||| ||| ||| |||||||||||||||||||| |||||||||| | ||||| || |||||||||||||||||| |||     
T  28933767 cggattaggaaagtgtaccatattgtttagcaaataataaagtgataagtagagtatcgtatccacaaggattatcgtttcgtccaaacaatttgtgttg 28933668  T
Q  125 cttattttgtaagttgacgatat--aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  |||||||| |||||  ||||||  |||||||||||||||| ||| ||||||||||||||||||||||| |||| ||||||||| |||||||    
T  28933667 cttattt--taagttgatgatataaaataaaagagataagggttagaga-ttgcaatttttatctgtttgcaacagagcaag-ttacttgttcttggttg 28933572  T
Q  221 cagaaaagtaagcagcggttag 242  Q
    || ||||| || ||||||||||    
T  28933571 ca-aaaaggaaacagcggttag 28933551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 24 - 254
Target Start/End: Complemental strand, 12183439 - 12183209
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||||||| || |||||||||| | |||||||| |||||||| |||||||  ||||    
T  12183439 gcggattatgcaagtgtaccaaatcgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcatttcgtcctaacaattcacgtt 12183340  T
Q  124 acttattttgtaagttgacgatat--aataaaaga---taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggt 218  Q
    ||||||||  |||| |||||||||  |||||||||   ||| ||||||||| ||| ||| ||||||||||||||||| | |||| |||| || |||||||    
T  12183339 acttattt--taaggtgacgatataaaataaaagagtttaaaggttagaga-ttgcaatgtttatctgtttgcaacatagcaag-ttacctg-ttttggt 12183245  T
Q  219 tgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    | |||||||||||||| ||||||| |||||||||||    
T  12183244 tacagaaaagtaagcaacggttaggattcttcgaat 12183209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 254
Target Start/End: Complemental strand, 14079548 - 14079336
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||||||||||||||||||| | ||||||||| |||||||||||||||||| |||||| ||| |            ||||||||| |||  |||||||||    
T  14079548 attaggcaagtgtaccaaatcgtttaccaagttataaagtgataagtagagtatcgta-ccaaa------------tcgtccaaaaaatccgcgttactt 14079462  T
Q  128 attttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaa 227  Q
    ||||| ||||||||||||||  ||||| ||||||| |||||||||| ||||||||||||||||||||| |  |||||| | | ||||||||| |||||||    
T  14079461 atttt-taagttgacgatatgctaaaatataagggctagagagttgcaatttttatctgtttgcaacaaaggaagttttcctatttttggttacagaaaa 14079363  T
Q  228 gtaagcagcggttagaattcttcgaat 254  Q
    |||||||||||||||||||||||||||    
T  14079362 gtaagcagcggttagaattcttcgaat 14079336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 17827192 - 17826974
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    |||||||||||||| | | |||  |||||||||||| |||| ||||| |||||||||| | |||||||| |||| ||||||||||| |||||||||||||    
T  17827192 ggcaagtgtaccaactcgtttaataagtaataaagttataaatagagtatcgtatccacatggattgtcgtttcttccaaacaattcgcgttacttattt 17827093  T
Q  132 tgtaagttgacgatataataaaagataagggttaga-gagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagta 230  Q
    | |   ||||| ||||||   ||||||||||||| | |||||| ||||||||| ||||||||||| | || |||||||||||||||||||||||||||||    
T  17827092 ttttt-ttgacaatataa---aagataagggttaaaagagttgcaatttttatatgtttgcaacatagca-gtttacttgtttttggttgcagaaaagta 17826998  T
Q  231 agcagcggttagaattcttcgaat 254  Q
    |||| |||||||||||||| ||||    
T  17826997 agcaacggttagaattctttgaat 17826974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 254
Target Start/End: Original strand, 5624635 - 5624861
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtat-ccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||| ||| | |||  ||||||| ||| || ||||||||||||||||||    
T  5624635 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatacaatagagattgtcgttttgtgcaaacaatttgcgttact 5624734  T
Q  127 ta-ttttgtaag-ttgacgatataataaaagataagggttagaga-gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    || ||||||||| ||||||||   | ||||| ||||||||||| | |||| |||||||||||||||| || ||| | |||||||  | ||||||||||||    
T  5624735 tatttttgtaagtttgacgat---agaaaagttaagggttagaaaggttgcaatttttatctgtttgtaatagagc-agtttaccggcttttggttgcag 5624830  T
Q  224 aaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||| |||||||||||    
T  5624831 aaaagtaagcagcggttaggattcttcgaat 5624861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 34 - 236
Target Start/End: Original strand, 9516786 - 9516988
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tttt 132  Q
    |||||||||||||| | ||||| |||||||||||||||||||||| |||||||||| | |||||||| |||||||||||||| | |||||||||| ||||    
T  9516786 caagtgtaccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttattttt 9516885  T
Q  133 gtaagttgacgatataataaaagataagggttagaga-gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaa 231  Q
    ||||||||||||||||| || | | |||||||||| | |||| || ||||||||||| |||||| | ||||||||| |  ||||| |||||||||| |||    
T  9516886 gtaagttgacgatataa-aagataaaagggttagaaaggttgtaagttttatctgttagcaacatagcaagtttacct-attttgattgcagaaaattaa 9516983  T
Q  232 gcagc 236  Q
    |||||    
T  9516984 gcagc 9516988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 250
Target Start/End: Original strand, 15466362 - 15466585
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||||| | |||||||||||||||||| || |||||| |||||||| ||| |||||||| ||||||| |||||||| ||||||    
T  15466362 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtg-tacgtagagtatcgtatcaatagggattgtcatttcgtctaaacaattcgcgtta 15466460  T
Q  125 cttattttgtaagttgacgat---ataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggtt 219  Q
     |||||||||   || |||||   |||||||||||  ||||||||||||| ||| || |||||||||||||||||||| ||||||  |   | |||||||    
T  15466461 gttattttgt--tttaacgatataataataaaagagttaagggttagaga-ttgcaaattttatctgtttgcaacagagcaagttacc---tatttggtt 15466554  T
Q  220 gcagaaaagtaagcagcggttagaattcttc 250  Q
    |||||||||||| |||||||||||| |||||    
T  15466555 gcagaaaagtaaacagcggttagaactcttc 15466585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 9726014 - 9726120
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| | |||||||| |||||||||||||||||||||||    
T  9726014 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatttgcgtta 9726113  T
Q  125 cttattt 131  Q
    |||||||    
T  9726114 cttattt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 241
Target Start/End: Original strand, 21907424 - 21907642
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||||| |||||||| | ||||||||||||||||||||||||| || |||||||||| | |||||||| ||||||||||| || | ||||||    
T  21907424 cggattaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaaaaagtcgcgtta 21907523  T
Q  125 cttattttgtaagttgacgatat--aataaa--agataagggttagagagttga-aatttttatctgtttgcaacagaacaagtttacttgtttttggtt 219  Q
    |||| ||  |||||||| |||||  ||||||  |||||||||||||| | |  | ||||||||||||||||||||||| |||| |||  | |||||||||    
T  21907524 cttaatt--taagttgatgatataaaataaaagagataagggttagaaattacataatttttatctgtttgcaacagagcaag-ttagctatttttggtt 21907620  T
Q  220 gcagaaaagtaagcagcggtta 241  Q
    ||| ||||| || |||||||||    
T  21907621 gcaaaaaaggaaacagcggtta 21907642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 242
Target Start/End: Complemental strand, 23645861 - 23645658
Alignment:
Q  38 tgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaag 137  Q
    |||||||||| | |||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||  ||||| |||||||  ||     
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattatttttgaac 23645762  T
Q  138 ttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcag 235  Q
       |  ||| |||||||||  | ||||||||||| ||| ||||||||| ||||||||||||| |||| |||| || ||||||||||| ||||||||||||    
T  23645761 aataaaataaaataaaagagttgagggttagaga-ttgcaatttttatttgtttgcaacagagcaag-ttacatg-ttttggttgcataaaagtaagcag 23645665  T
Q  236 cggttag 242  Q
     ||||||    
T  23645664 tggttag 23645658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 254
Target Start/End: Complemental strand, 27124589 - 27124373
Alignment:
Q  35 aagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgt 134  Q
    ||||||||||||| | |||||||||||||||||||||| || |  |||||||| | | |||||||| |||||  |||||||||  |||||||||||||      
T  27124589 aagtgtaccaaatcgtttaccaagtaataaagtgataattatattatcgtatcgacatggattgtcgtttcgagcaaacaattctcgttacttatttttg 27124490  T
Q  135 aagttgacgatataataaaagataagggttaga-gagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagc 233  Q
    || ||||||||||||   || |||||||||| | || ||  ||||||||| ||||||||||||| ||||||||| ||| || ||||||||||||||||||    
T  27124489 aacttgacgatataa---aacataagggttaaaagacttccaatttttatatgtttgcaacagagcaagtttacctgtctt-ggttgcagaaaagtaagc 27124394  T
Q  234 agcggttagaattcttcgaat 254  Q
    ||||||||  |||||| ||||    
T  27124393 agcggttaagattctttgaat 27124373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 242
Target Start/End: Complemental strand, 21672543 - 21672325
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||||||||||| |||||||||| | ||||| || |||||||||||||||| | |||    
T  21672543 gcggattaggcaagtgcaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaattcgtgtt 21672444  T
Q  124 acttattttgtaagttgacgatataataa-aagat---aagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggtt 219  Q
    |||| ||||   ||||||||||| ||||| ||||    |||| ||||||| ||| ||||||||||| |||||||| || |||| |||| || |||| |||    
T  21672443 actttttttt--agttgacgataaaataataagagttaaaggattagagatttgcaatttttatctatttgcaactgagcaag-ttacctg-ttttcgtt 21672348  T
Q  220 gcagaaaagtaagcagcggttag 242  Q
    ||| |||||||||  ||||||||    
T  21672347 gcataaaagtaagtggcggttag 21672325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 254
Target Start/End: Complemental strand, 23232064 - 23231863
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaag-ttgacgatata 148  Q
    |||||||||||||||||||||||||| | ||| |||||||| | ||||||  ||||||||||||||| |||||||||| ||||||||| ||||||||       
T  23232064 ttaccaagtaataaagtgataagtagggtatcatatccataagaattgtcggttcgtccaaacaattcgcgttacttatttttgtaagtttgacgat--- 23231968  T
Q  149 ataaaagataagggttag-agagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattc 247  Q
    ||||||| ||| |||||| ||  ||| || |||||||||||||||||||| ||| |||||||| ||||||||  ||||||||||||| || |||| ||||    
T  23231967 ataaaagttaacggttagaagtcttgcaa-ttttatctgtttgcaacagagcaaatttacttg-ttttggttatagaaaagtaagcaacgtttaggattc 23231870  T
Q  248 ttcgaat 254  Q
    |||||||    
T  23231869 ttcgaat 23231863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 242
Target Start/End: Complemental strand, 21679959 - 21679741
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||||||||||||| |||||||||| | ||||| || |||||||||||||||| | |||    
T  21679959 gcggattaggcaagtgcaccaaatcgtttactaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaattcgtgtt 21679860  T
Q  124 acttattttgtaagttgacgatataataa-aagat---aagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggtt 219  Q
    |||| ||||   ||||||||||| ||||| ||||    |||| ||||||| ||| ||||||||||| |||||||| || |||| |||| || |||| |||    
T  21679859 actttttttt--agttgacgataaaataataagagttaaaggattagagatttgcaatttttatctatttgcaactgagcaag-ttacctg-ttttcgtt 21679764  T
Q  220 gcagaaaagtaagcagcggttag 242  Q
    ||| |||||||||  ||||||||    
T  21679763 gcataaaagtaagtggcggttag 21679741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 239
Target Start/End: Original strand, 22567832 - 22568044
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| ||||| || || ||||||| | |||||||  |||||||||||||| |  |||||    
T  22567832 cggattaggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtatagtattgtatccacatggattgtggtttcgtccaaacaactcacgtta 22567931  T
Q  125 cttattttgtaagttgacgatat--aataaaa--gataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  |||||| |||||||  |||||||  | ||||||||||||| ||| || ||||||||||||||||||||   ||||  || |  ||||||||    
T  22567932 cttattt--taagttaacgatataaaataaaagggttaagggttagaga-ttgtaa-ttttatctgtttgcaacagagtcagttacctag--tttggttg 22568025  T
Q  221 cagaaaagtaagcagcggt 239  Q
    |||||||||||||| ||||    
T  22568026 cagaaaagtaagcaacggt 22568044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 17729143 - 17729244
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||| ||||||||||||| | |||||||||||||||||||||||||||| |||||||||| |  ||||||| |||||||||||| ||| |||||    
T  17729143 gcggattaggtaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaagattgtcgtttcgtccaaacgattcgcgtt 17729242  T
Q  124 ac 125  Q
    ||    
T  17729243 ac 17729244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 24657431 - 24657347
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||||||||||||| | | ||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  24657431 agttgaaatttttatctgtttgcaacagagcgaatttacctgtttt-ggttgcagaaaagtaagcagcggttagaattcttcgaat 24657347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 239
Target Start/End: Original strand, 4339728 - 4339940
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    ||||||| |||||||||||||||| ||| ||| |||||||||||||||||||| || ||||||| |  ||||||| ||| |||||| ||||| || ||||    
T  4339728 ggattagacaagtgtaccaaattgtttatcaaataataaagtgataagtagagtattgtatccacaatgattgtcgttttgtccaaccaattcgcattac 4339827  T
Q  126 ttattttgtaagttgacgatat--aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    ||||||  ||  ||||||||||  ||||||  |||||||||||||||| ||  ||| ||||| ||||||||||  | |||| |||| || ||||||||||    
T  4339828 ttattt--tagtttgacgatataaaataaaagagataagggttagaga-ttacaatatttatttgtttgcaactaagcaag-ttacctg-ttttggttgc 4339922  T
Q  222 agaaaagtaagcagcggt 239  Q
    |||||||||| |||||||    
T  4339923 agaaaagtaaccagcggt 4339940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 242
Target Start/End: Original strand, 11176942 - 11177159
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||| ||| | ||||| |||| ||||||||||||||||| |||||||||| | || ||||| |||| || ||| |||| | ||||    
T  11176942 cggattaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagtatcgtatccacatgggttgtcgtttcttcgaaataattcgtgtta 11177041  T
Q  125 cttattttgtaagttgacgatat--aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  ||| ||||||||||  ||||||  |||||||||||||| | ||| |||||||||  |||||||||| | |||| |||| ||||||| |||     
T  11177042 cttattt--taaattgacgatataaaataaaagagataagggttaga-aattgcaatttttataagtttgcaacatagcaag-ttacctgttttttgtta 11177137  T
Q  221 cagaaaagtaagcagcggttag 242  Q
    || ||||| || ||||||||||    
T  11177138 cataaaaggaaacagcggttag 11177159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 8241269 - 8241483
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||||| | |||| |||||| |||||||||||||||| |||||||||| | || ||| | ||| ||||||||||||  | |||    
T  8241269 cggattaggcaagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgtatccacaagg-ttg-cgttttgtccaaacaattcacatta 8241366  T
Q  125 cttattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  ||  || |||||||  |||||||||  |||| |||||||| ||| ||||||||||||||||||||| | |||| |||| ||  ||||||||    
T  8241367 cttattt--tagtttcacgatataaaataaaagagttaagagttagaga-ttgcaatttttatctgtttgcaacatagcaag-ttacctg--tttggttg 8241460  T
Q  221 cagaaaagtaagcagcggttaga 243  Q
     ||||||||||||||| ||||||    
T  8241461 tagaaaagtaagcagcagttaga 8241483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 17299925 - 17299832
Alignment:
Q  38 tgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    |||| ||||| | |||||||||||||||||||||||||||| ||||||| |||  |||||||| ||| ||||||||||||||||||||||||||    
T  17299925 tgtagcaaatcgtttaccaagtaataaagtgataagtagagtatcgtattcatcgggattgtcgtttagtccaaacaatttgcgttacttattt 17299832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 25927410 - 25927305
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||||  | |||||||||||||||||||||||||||  |||||||||| | ||||| |  ||||||||||||||||  |||||    
T  25927410 cggattaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtatccacatggattttagtttcgtccaaacaattcacgtta 25927311  T
Q  125 cttatt 130  Q
    ||||||    
T  25927310 cttatt 25927305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 18075496 - 18075365
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcg-t 122  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||   |||||||| ||| ||||||||||| || | |    
T  18075496 gcggattaggaaagtgtacgaaattgtttaccaagtaataaagtgataagcagagtatcgtatccacgtggattgtcgttttgtccaaacaatctgagtt 18075397  T
Q  123 tacttattttgtaagttgacgatataataaaaga 156  Q
    |||||||||  | ||||||| ||| |||||||||    
T  18075396 tacttattt--ttagttgacaataaaataaaaga 18075365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 7543067 - 7542962
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||| |||| ||||||| ||||||||||||||||||||||||| || |||||||| ||  ||| |||  |||| ||||||||||| ||||||    
T  7543067 cggattaggcaaatgtatcaaattgtttaccaagtaataaagtgataagtaaagtatcgtatcaatgtggactgtagtttcatccaaacaattcgcgtta 7542968  T
Q  125 cttatt 130  Q
    ||||||    
T  7542967 cttatt 7542962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 149
Target Start/End: Complemental strand, 21688902 - 21688780
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||| ||||||||| ||| | |||| ||||||| ||||||||||||||| || ||||||||| |||||||| || | |||||| |||| ||||||    
T  21688902 cggattaggaaagtgtacccaatcgtttactaagtaatcaagtgataagtagagtattgtatccatagggattgtcgttacatccaaaaaattcgcgtta 21688803  T
Q  125 cttattttgtaagttgacgatataa 149  Q
    |||||||||  |||||| |||||||    
T  21688802 cttattttg--agttgaagatataa 21688780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 24475153 - 24475276
Alignment:
Q  129 ttttgtaagttgacgatataataaaagataa-gggttagagag-ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaa 226  Q
    |||||||||||||||||| ||   ||||||| |||||||| || ||| ||| ||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  24475153 ttttgtaagttgacgataaaa---aagataaagggttagaaaggttgcaatctttatctgtttgcaacaaaacaagtttacctgtttt-ggttgcagaaa 24475248  T
Q  227 agtaagcagcggttagaattcttcgaat 254  Q
    |||||| || |||||| |||||||||||    
T  24475249 agtaagtagtggttaggattcttcgaat 24475276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 250
Target Start/End: Original strand, 9838380 - 9838572
Alignment:
Q  57 agtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacgatataa--taaaa 154  Q
    |||||||||||||||||||||| || ||||||| | |||||||| ||| ||  |||||| | ||||||||||||||  |  ||||||||||||  |||||    
T  9838380 agtaataaagtgataagtagagtattgtatccacatggattgtcattttgttgaaacaactcgcgttacttatttt--agtttgacgatataaaataaaa 9838477  T
Q  155 gat--aagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttc 250  Q
    ||   ||| |||||||| ||| ||||||||||||||||||| ||| |||||| ||  ||||| |||||||||||||||||||  |||||| |||||||    
T  9838478 gagtgaagcgttagaga-ttgtaatttttatctgtttgcaaaagagcaagtt-acccgtttt-ggttgcagaaaagtaagcaatggttaggattcttc 9838572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 254
Target Start/End: Complemental strand, 20005900 - 20005796
Alignment:
Q  151 aaaagataagggttagagag-ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattctt 249  Q
    ||||| ||||||||||| || ||| ||||||||| ||||||||||||| | ||||||| |||||||||||||||||| ||| ||||||||||  ||||||    
T  20005900 aaaagttaagggttagaaagcttgcaatttttatttgtttgcaacagagcgagtttacctgtttttggttgcagaaaggtatgcagcggttaagattctt 20005801  T
Q  250 cgaat 254  Q
    |||||    
T  20005800 cgaat 20005796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 21932155 - 21932100
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgt 84  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  21932155 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgt 21932100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 17382214 - 17382275
Alignment:
Q  178 ttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggtt 240  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||    
T  17382214 ttttatctgtttgcaacagagcaagtttacatg-ttttggttgcagaaaagtaagcagcggtt 17382275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 177 - 254
Target Start/End: Original strand, 14637012 - 14637089
Alignment:
Q  177 tttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||  || ||||||| ||||||||| |||||||||||||||||||||||||||||  ||| |||||||||||    
T  14637012 tttttatcttattacaacagagcaagtttacctgtttttggttgcagaaaagtaagcagcgaataggattcttcgaat 14637089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 22566256 - 22566163
Alignment:
Q  38 tgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    |||||||||||  |||||||||||||||||||||||||||| ||| |||||| | | ||||||  |||||| || ||||| |||||||||||||    
T  22566256 tgtaccaaattatttaccaagtaataaagtgataagtagagtatcatatccacaagaattgtcgcttcgtctaagcaattcgcgttacttattt 22566163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 242
Target Start/End: Complemental strand, 8039238 - 8039027
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||||||| |||||| | |||||||||||||||||| ||||| ||| |||||||       ||||||| |||| ||||||||||| | ||||    
T  8039238 cggattaggcaagtgtgccaaatcgtttaccaagtaataaagtg-taagtggagtatcgtat-------gattgtcgtttcatccaaacaattcgtgtta 8039147  T
Q  125 cttattttgtaagttgacgat------ataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttg 216  Q
    ||||||||||   ||||||||      |||||||||||  ||||||||||||| ||| ||||||||| |||||||||  |||| ||||  ||   |||||    
T  8039146 cttattttgt---ttgacgatataataataataaaagagttaagggttagaga-ttgcaatttttatatgtttgcaatcgaacgagttacct--attttg 8039053  T
Q  217 gttgcagaaaagtaagcagcggttag 242  Q
    |||| ||||||||||| || ||||||    
T  8039052 gttgtagaaaagtaagtagtggttag 8039027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 254
Target Start/End: Complemental strand, 9899062 - 9898841
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagt-gataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||| |||||||||||||||| |||||||||||||||||  | |||||||| || |||||||   |||||||  |||||| ||||| |||  ||||||||    
T  9899062 ttagacaagtgtaccaaattgtttaccaagtaataaagtctaaaagtagagtattgtatccacggggattgttgtttcgttcaaaccattcacgttactt 9898963  T
Q  128 attttgtaagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaa 225  Q
    |||||||  | |||    |||||||||||  |||  ||||||   ||| ||||||||||||||||||| ||||||||||  ||   ||||||||||||||    
T  9898962 attttgtttgatgatataataataaaagaattaaatgttaga---ttgcaatttttatctgtttgcaa-agaacaagttacct--attttggttgcagaa 9898869  T
Q  226 aagtaagcagcggttagaattcttcgaat 254  Q
    |||||| ||||||||| || | |||||||    
T  9898868 aagtaa-cagcggttacaactgttcgaat 9898841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 136
Target Start/End: Complemental strand, 17883891 - 17883780
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| ||| |||||||||| | |||||||||||||| ||| | ||||||| |||| ||| | | ||||||||||||||||||||||||| | ||||    
T  17883891 cggattagccaaatgtaccaaatcgtttaccaagtaataacgtg-tgagtagaggatcgcatcgacagggattgtcctttcgtccaaacaattcgtgtta 17883793  T
Q  125 ctta-ttttgtaa 136  Q
    |||| ||||||||    
T  17883792 cttacttttgtaa 17883780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 19244579 - 19244667
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaa 115  Q
    |||||||||||| ||| | || | |||||||||||||||||||||||||||| |||| ||| |||  ||||||| ||||||||||||||    
T  19244579 gattaggcaagtttactagatcgtttaccaagtaataaagtgataagtagagtatcgaatctatagagattgtcgtttcgtccaaacaa 19244667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 20145166 - 20145114
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagag 78  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  20145166 ggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagag 20145114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 22187673 - 22187725
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagag 78  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  22187673 ggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagag 22187725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 25781915 - 25781998
Alignment:
Q  170 gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||| ||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||| |||  ||||| |||||||||||    
T  25781915 gttgcaatttttatctgtttgcaacagagcaagtttacct-attttggttgcagaaaagtaaacagtagttaggattcttcgaat 25781998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 2586716 - 2586810
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| || || | ||||| |  ||||||| ||||||||||| |||| |||||    
T  2586716 attaggcaagtgtaccaaattgtttaccaagtaatgaagtgataagtatagtat-gcatccaaaatgattgtcgtttcgtccaaaaaattcgcgtt 2586810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 20145079 - 20145000
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||| |||||||||||||  |||||||| | ||||| |||||||||||| |||||||||| || |||||||||||    
T  20145079 aatttttatatgtttgcaacagagaaagtttacgtatttttagttgcagaaaagcaagcagcggtaaggattcttcgaat 20145000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 22187760 - 22187839
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||| |||||||||||||  |||||||| | ||||| |||||||||||| |||||||||| || |||||||||||    
T  22187760 aatttttatatgtttgcaacagagaaagtttacgtatttttagttgcagaaaagcaagcagcggtaaggattcttcgaat 22187839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 20005977 - 20005899
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaa 112  Q
    |||||||||||||| | ||||||||||||||||||||||| |||| |||||||| | | ||||| || |||||||||||    
T  20005977 caagtgtaccaaatcgtttaccaagtaataaagtgataagcagagtatcgtatctacatggattttcgtttcgtccaaa 20005899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 11136033 - 11136118
Alignment:
Q  170 gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc-agaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||| ||||||||||||||||||||||| | |  |||| ||||||||||||| | ||||||||| ||||||||| |||||||||||    
T  11136033 gttgcaatttttatctgtttgcaacagagcgaacttacctgtttttggttgcaaaaaaagtaagaagcggttaggattcttcgaat 11136118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 23009471 - 23009376
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaag-ttgacgatataa 149  Q
    |||||| ||||||||||||||||| |||||||||| | ||||||||||||| |||||| ||||   |||||||| ||||||||| ||||||||||||    
T  23009471 caagtattaaagtgataagtagagcatcgtatccacagggattgtcctttcttccaaa-aattcttgttacttatttttgtaagtttgacgatataa 23009376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 23778893 - 23778988
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaag-ttgacgatataa 149  Q
    |||||| ||||||||||||||||| |||||||||| | ||||||||||||| |||||| ||||   |||||||| ||||||||| ||||||||||||    
T  23778893 caagtattaaagtgataagtagagcatcgtatccacagggattgtcctttcttccaaa-aattcttgttacttatttttgtaagtttgacgatataa 23778988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 22813677 - 22813612
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggtta 241  Q
    ||||||||| ||||||||||| | ||||||||| |||||| ||||||||||||||||| ||||||||    
T  22813677 aatttttatttgtttgcaacaaagcaagtttacctgtttt-ggttgcagaaaagtaagtagcggtta 22813612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 22413126 - 22413049
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    ||||||||||||| |||||||||| |||||||| | | ||||||| ||||||||| |||||||   ||||||||||||    
T  22413126 caagtaataaagttataagtagagtatcgtatctacatggattgttctttcgtccgaacaattcttgttacttatttt 22413049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 222
Target Start/End: Complemental strand, 6630771 - 6630601
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacgatat--a 148  Q
    ||||||||||||||  | |||||||||| |||| ||||| |  ||||||| ||||||| ||||   |||||||||||||||  ||||||||| ||||  |    
T  6630771 ttaccaagtaataa--taataagtagagtatcggatccacatagattgtcgtttcgtctaaaccgcttgcgttacttattt--taagttgacaatataaa 6630676  T
Q  149 ataaaag--ataagggttagagagttgaaattttta-tctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||||  |||| ||||||||| ||| |||||||| | | ||||||||||| |||| |||| ||||||||||||||    
T  6630675 ataaaagatataaaggttagaga-ttgcaatttttattttttttgcaacagagcaag-ttacctgtttttggttgca 6630601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 24251511 - 24251611
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||| ||||||||| ||| | | ||||||||||||||||| ||||| |||| |||| ||||| | || ||||| | | |||||||||||| |||||||||    
T  24251511 attaagcaagtgtatcaattcgtttaccaagtaataaagtcataagcagaggatcgcatccacagggtttgtcgtcttgtccaaacaattcgcgttactt 24251610  T
Q  128 a 128  Q
    |    
T  24251611 a 24251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 22566118 - 22566052
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttag 242  Q
    |||||||||||||||||||||  ||||||| || | |||||| ||| |||||||||||||||||||||    
T  22566118 aatttttatctgtttgcaacactacaagtt-acctatttttgattgtagaaaagtaagcagcggttag 22566052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 254
Target Start/End: Original strand, 1635110 - 1635182
Alignment:
Q  180 ttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||||||||| | |||||| || |||||| ||||| |||||||||| |||||||||| |||||||||||    
T  1635110 ttatctgtttgcaacaaagcaagtt-acatgtttt-ggttgtagaaaagtaaacagcggttaggattcttcgaat 1635182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 20002484 - 20002440
Alignment:
Q  30 taggcaagtgtaccaaattgcttaccaagtaataaagtgataagt 74  Q
    ||||||||||||||||||   ||||||||||||||||||||||||    
T  20002484 taggcaagtgtaccaaatcaattaccaagtaataaagtgataagt 20002440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 254
Target Start/End: Complemental strand, 21841661 - 21841578
Alignment:
Q  170 gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||| |||||||||||| |||||||| | |||||||||||| |||||||||||  |||  ||| || |||||| |||||||||||    
T  21841661 gttgcaatttttatctgattgcaacaaagcaagtttacttg-ttttggttgcaagaaatgaagtagtggttaggattcttcgaat 21841578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 22413015 - 22412940
Alignment:
Q  178 ttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||| |||||| | | ||||| |||||| |||| ||| |||||||| ||||||||| |||||||||||    
T  22413015 ttttatctgtttgtaacagagcgaatttacctgtttt-ggttacaggaaagtaagtagcggttaggattcttcgaat 22412940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 24657532 - 24657436
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaag-ttgacgatataa 149  Q
    ||||||||||| |||||||| ||| |||||||||| | |||||||  |||||||| |||||||   |||||||| ||||||||| |||||| |||||    
T  24657532 caagtaataaaatgataagtcgagtatcgtatccacagggattgttttttcgtccgaacaattcttgttacttatttttgtaagtttgacggtataa 24657436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 9385956 - 9386026
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttc 105  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||   |||||||| | |||||||| ||||    
T  9385956 caagtgtaccaaattggttaccaagtaataaagtg-caagtagagtcgcgtatccacatggattgtcgtttc 9386026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 18075331 - 18075289
Alignment:
Q  212 ttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||||||||||||||  |||||| ||||    
T  18075331 ttttggttgcagaaaagtaagcagcggttaagattctttgaat 18075289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 24252206 - 24252131
Alignment:
Q  154 agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaag 232  Q
    |||| ||||||||| | ||| ||||||||||||||||||||||| ||||||| | || ||||||||||||||| |||||    
T  24252206 agatgagggttagata-ttgtaatttttatctgtttgcaacagagcaagttt-cgtg-ttttggttgcagaaatgtaag 24252131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 28586133 - 28586031
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    |||| ||||| |||||||| | ||||| ||||||||| |||||||||||| ||| |||| | | |||||||| ||||  | |||||||   |||||||||    
T  28586133 ttagacaagtataccaaatcgtttaccgagtaataaattgataagtagagtatcatatcgacatggattgtcgtttcaacaaaacaatccacgttactta 28586034  T
Q  129 ttt 131  Q
    |||    
T  28586033 ttt 28586031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 21841765 - 21841688
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    |||||||||||| |||||||||||  | | ||||| | ||||||||||||||||| |||| ||   ||||||||||||    
T  21841765 caagtaataaagagataagtagagttttgaatccacatggattgtcctttcgtccgaacatttcttgttacttatttt 21841688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 22813786 - 22813709
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    ||||||||| |||||||||||  | || ||||| ||| ||||||||||||| ||| |||||||   ||||||||||||    
T  22813786 caagtaatatagtgataagtaatgtattgtatctatagggattgtcctttcatccgaacaattcttgttacttatttt 22813709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 28589533 - 28589440
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgt 122  Q
    ||||||||||||||||||| | ||| ||| ||| ||||||||||||| || |||||| ||| | ||||| || ||||  ||||| |||| ||||    
T  28589533 ttaggcaagtgtaccaaatcgtttatcaaataacaaagtgataagtaaagtatcgtagccacatggattttcgtttcaaccaaaaaattcgcgt 28589440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 20722278 - 20722209
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtc 100  Q
    |||||||| |||||||||| | |||||||||||||||||  ||||||||| ||  |||||| | ||||||||    
T  20722278 ttaggcaaatgtaccaaatcgtttaccaagtaataaagt--taagtagagtataatatccacaaggattgtc 20722209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 3e-75; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 24 - 250
Target Start/End: Original strand, 15339229 - 15339455
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    ||||||||||||||||||||||||   ||||||||||||||||||| |||||||| ||| |||||| | |||||||| |||||||||||||||| |||||    
T  15339229 gcggattaggcaagtgtaccaaatcatttaccaagtaataaagtgaaaagtagagtatcatatccacatggattgtcgtttcgtccaaacaattagcgtt 15339328  T
Q  124 acttattttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    ||||| |||||||||| | ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||  ||||||| |||||||    
T  15339329 acttactttgtaagttaaggatataataaaagataagggttagagagttgcaatttttatttgtttgcaacagagcaagtttatctgttttttgttgcag 15339428  T
Q  224 aaaagtaagcagcggttagaattcttc 250  Q
    ||||||||||||| ||||| |||||||    
T  15339429 aaaagtaagcagcagttaggattcttc 15339455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 24 - 254
Target Start/End: Complemental strand, 29719339 - 29719110
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||  |||||||||| | |||||||| |||||| ||||||||| |||||    
T  29719339 gcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtttcgttcaaacaattcgcgtt 29719240  T
Q  124 acttattttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    ||||||||| ||  |||||| |||||||||| |||||||||||||||||| ||||||||| ||| ||||||||| ||||||||| ||| |||||||||||    
T  29719239 acttatttt-tagtttgacggtataataaaatataagggttagagagttgcaatttttatatgtatgcaacagagcaagtttacctgtgtttggttgcag 29719141  T
Q  224 aaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||| ||||| |||||||||||    
T  29719140 aaaagtaagcagcagttaggattcttcgaat 29719110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 27 - 254
Target Start/End: Original strand, 17349352 - 17349569
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    |||||||||| ||||| |||| | |||||||||||||||||| ||||||||| |||||||||| |  ||||||| ||||||||||||| || ||||||||    
T  17349352 gattaggcaa-tgtactaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaagattgtcgtttcgtccaaacatttcgcgttact 17349449  T
Q  127 tattttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaa 226  Q
    |||||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  17349450 tattttgtaagttgacgatataataaaagataagg--------gttgcaatttttatctgtttgcaacagagcaagtttacttgtttttggttgcaaaaa 17349541  T
Q  227 agtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||| ||||||||||||||    
T  17349542 agtaagcagcggtcagaattcttcgaat 17349569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 28 - 240
Target Start/End: Complemental strand, 31805004 - 31804791
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||||| ||||||||||||||| ||||||| |||||||||||||||||||| || ||||||| |  ||||| | |||||||||| |||| || |||||||    
T  31805004 attaggaaagtgtaccaaattgtttaccaaataataaagtgataagtagagtattgtatccacagagattgccgtttcgtccaaccaatctgtgttactt 31804905  T
Q  128 atttt-gtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaa 226  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| | | ||| ||||| ||||||||||||||||||    
T  31804904 atttttgtaagttgacgatataataaaagataagggttagagagttgcaatttttatttgtttgcaataaagcaaatttacctgtttttggttgcagaaa 31804805  T
Q  227 agtaagcagcggtt 240  Q
    ||||||||||||||    
T  31804804 agtaagcagcggtt 31804791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 24 - 254
Target Start/End: Original strand, 25618548 - 25618776
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||||||| ||| ||||| | |||||||||||||||||||||||||||| ||| |||||| | |||||||| ||||||| |||||||| ||||     
T  25618548 gcggattaggcaagcgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacaattcgcgta 25618646  T
Q  124 acttattttgtaagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    ||||||||  | |||||||||||||||||||||   ||  |||||||| ||| |||||||||||||||||||||||  |||||||| || ||||||||||    
T  25618647 acttattt--ttagttgacgatataataaaagagtgaaaagttagagatttgcaatttttatctgtttgcaacagagaaagtttacctg-ttttggttgc 25618743  T
Q  222 agaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||| |||||||||||||    
T  25618744 agaaaagtaagcagcggttcgaattcttcgaat 25618776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 27909219 - 27908997
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    |||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| | || || |  |||| |||||||||||  ||||||||||||    
T  27909219 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatgggttattgtttcatccaaacaattcacgttacttattt 27909120  T
Q  132 t-gtaagtt-gacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagt 229  Q
    | ||||||| |||||||||| ||   | ||||||||||  |||| ||||||||||||||||||||||| ||||||||| || |||||||||||||||| |    
T  27909119 ttgtaagtttgacgatataa-aagttaaaagggttagaacgttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttggttgcagaaaatt 27909022  T
Q  230 aagcagcggttagaattcttcgaat 254  Q
    ||||||||||||| |||||||||||    
T  27909021 aagcagcggttaggattcttcgaat 27908997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 32 - 242
Target Start/End: Complemental strand, 17743576 - 17743367
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    |||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| | ||||| || |||||||||||||||| | |||||||| ||    
T  17743576 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcgtttcgtccaaacaattcgtgttacttattt 17743477  T
Q  131 ttgtaag-ttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagt 229  Q
    ||| ||| || |||||   ||||||| ||||||||||||||||| ||||||||||| ||||||||  | ||||||||| |||||||||||| |||||||     
T  17743476 ttgcaagtttaacgat---ataaaagttaagggttagagagttgcaatttttatctttttgcaactaagcaagtttacctgtttttggttgtagaaaagg 17743380  T
Q  230 aagcagcggttag 242  Q
    |||| ||||||||    
T  17743379 aagccgcggttag 17743367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 242
Target Start/End: Original strand, 32085455 - 32085671
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| | |||||||| ||||||| |||||  | | ||||    
T  32085455 cggattaggtaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacagctcgtgtta 32085554  T
Q  125 cttattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  ||||||||||||||  |||||||||  |||| |||||||| ||| ||||||||||||||||||||||| ||||||  || |  ||||||||    
T  32085555 cttattt--taagttgacgatataaaataaaagagttaagagttagaga-ttgcaatttttatctgtttgcaacagagcaagttacctgg--tttggttg 32085649  T
Q  221 cagaaaagtaagcagcggttag 242  Q
    ||||||||||||||||||||||    
T  32085650 cagaaaagtaagcagcggttag 32085671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 254
Target Start/End: Complemental strand, 26603458 - 26603238
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||  ||| |||||||| |||||| |||||||||  ||||    
T  26603458 gcggattaggcaagtgtaccaaattgtttatcaagtaaaaaagtgataagtagagtatcgtatttatatggattgtcttttcgtgcaaacaattgacgtt 26603359  T
Q  124 acttattttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    ||||||||| |   |||||| ||| ||||||||       ||||  |||| ||||||||||||||||||||||| | ||||||| |||||||||||| ||    
T  26603358 acttatttt-tggtttgacggtatgataaaaga-------taga-tgttgcaatttttatctgtttgcaacagagc-agtttacctgtttttggttgtag 26603269  T
Q  224 aaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||| |||||||||||    
T  26603268 aaaagtaagcagcggttaggattcttcgaat 26603238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 252
Target Start/End: Original strand, 25196010 - 25196229
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    |||||||||||||| | | |||||||||||||||||||||||||||| ||| |||||| | || ||||||||||||||||||||||  ||||||||||||    
T  25196010 ggcaagtgtaccaa-tcgtttaccaagtaataaagtgataagtagagtatcatatccacaggggttgtcctttcgtccaaacaattcacgttacttattt 25196108  T
Q  132 t--gtaagttgacgatataataaaagataagggtt--agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaa 227  Q
    |   ||||||||||||   ||| ||| ||| ||||  | ||| ||||||||||||| ||||||||||| | ||||||||| || ||||||||||| ||||    
T  25196109 ttattaagttgacgat---atataagttaatggttaaaaagacttgaaatttttatatgtttgcaacatagcaagtttacctg-ttttggttgcaaaaaa 25196204  T
Q  228 gtaagcagcggttagaattcttcga 252  Q
    |||||||| |||||| |||||||||    
T  25196205 gtaagcagtggttaggattcttcga 25196229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 254
Target Start/End: Original strand, 28925521 - 28925742
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||  | |||||||   |||||||| ||||||||||||||||   |||| ||| ||    
T  28925521 ggcaagtgtactaaatcg-ttaccaagtaataaagtgataagtagagcgttgtatccacgtggattgtcgtttcgtccaaacaattcatgttatttattt 28925619  T
Q  131 ttgtaag-ttgacgatataataaaagat-aagggttagagag-ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaa 227  Q
    ||||||| ||||||||   ||||||||| |||||||||| || ||| ||||||||| ||||||||||| | ||||||||| || ||||||||||||||||    
T  28925620 ttgtaagtttgacgat---ataaaagataaagggttagaaagcttgcaatttttatttgtttgcaacatagcaagtttacctg-ttttggttgcagaaaa 28925715  T
Q  228 gtaagcagcggttagaattcttcgaat 254  Q
    |||||||| |||||| |||||||||||    
T  28925716 gtaagcagaggttaggattcttcgaat 28925742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 254
Target Start/End: Complemental strand, 20174740 - 20174515
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||| ||||||||||||| | |||||||||||||||||||||||||||| ||| | |||| | |||||||| ||||||||||||||||   ||||||    
T  20174740 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatttccacatggattgtcgtttcgtccaaacaattcatgttact 20174641  T
Q  127 tattttgtaagttgacgatat--aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||  |||||||| |||||  ||||||  || ||||||||||||| ||| ||||||||||||||||||||||| |||  |||| ||  ||||||   |    
T  20174640 tattt--taagttgatgatataaaataaaatagttaagggttagaga-ttggaatttttatctgtttgcaacagagcaa-attacctg--tttggtaaaa 20174547  T
Q  223 gaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||||||||||||| | |||||||||    
T  20174546 gaaaagtaagcagcggttagcactcttcgaat 20174515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 34 - 254
Target Start/End: Original strand, 30411679 - 30411888
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt- 132  Q
    ||||||||| ||||   |||||| ||||||||||||||||||||| |||||||| | | |||||||| |||||||| ||||||||||||||||||||||     
T  30411679 caagtgtacgaaatcttttaccatgtaataaagtgataagtagagtatcgtatcaacagggattgtcatttcgtcccaacaatttgcgttacttattttt 30411778  T
Q  133 gtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaag 232  Q
    |||| ||   || |  |||||||||| |          ||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  30411779 gtaatttt--gacagtataaaagatagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 30411866  T
Q  233 cagcggttagaattcttcgaat 254  Q
    |||||||||| ||| |||||||    
T  30411867 cagcggttaggatttttcgaat 30411888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 17635875 - 17635653
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    ||||| |||| ||||| | |||||||||||||||| || |||||||||||| |||||| |  ||||||| ||||||| ||| || |  ||||||||| ||    
T  17635875 ggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatccacagagattgtcgtttcgtcaaaaaaactcacgttacttattt 17635776  T
Q  131 ttgtaagttgacgatataataaaagataagggttagaga-gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagt 229  Q
    ||||||||||||||| ||| || | | |||||||||| | |||| ||||||||||||||||||||||| ||||||||| || ||||||||||||| || |    
T  17635775 ttgtaagttgacgatgtaa-aagataaaagggttagaaaggttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttggttgcagataaat 17635678  T
Q  230 aagcagcggttagaattcttcgaat 254  Q
    || |||| ||||||||| |||||||    
T  17635677 aaacagcagttagaatttttcgaat 17635653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 17675730 - 17675507
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttg-cgttacttatt 130  Q
    ||||| |||| ||||| | |||||||||||||||| || |||||||||||| |||| | |  ||||||| ||||||| ||| ||  |  |||||||||||    
T  17675730 ggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatcaacagagattgtcgtttcgtcaaaaaaaactcacgttacttatt 17675631  T
Q  131 tt-gtaagttgacgatataataaaagataagggttagagag-ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaag 228  Q
    || ||||||||||||| ||| || | | |||||||||| || ||| ||||||||||||||||||||||| ||||||||| || ||||||||||||||||     
T  17675630 tttgtaagttgacgatgtaa-aagataaaagggttagaaaggttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttggttgcagaaaaa 17675533  T
Q  229 taagcagcggttagaattcttcgaat 254  Q
    ||| |||||||||||||| |||||||    
T  17675532 taaacagcggttagaatttttcgaat 17675507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 254
Target Start/End: Original strand, 13776334 - 13776560
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    ||||| |||||||| ||||| | |||  || |||||||||||||||| ||| |||||||||| |  ||||||| ||||||||||||||    ||||||||    
T  13776334 attagacaagtgtagcaaatcgtttattaaataataaagtgataagt-gagtatcgtatccacatagattgtcatttcgtccaaacaacccacgttactt 13776432  T
Q  128 attttgtaagttgacgatataataaa-agataagggtta-gagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaa 225  Q
    |||||  |||||||||||| |||||| |||||||||||| |||| ||| |||||||||||||||||||||||  ||| |||| ||||||| ||| |||||    
T  13776433 atttt--aagttgacgataaaataaagagataagggttaagagatttgcaatttttatctgtttgcaacagagtaagattacctgttttttgttccagaa 13776530  T
Q  226 aagtaagcagcggttaga--attcttcgaat 254  Q
    |||||| || ||||||||  |||||||||||    
T  13776531 aagtaa-caacggttagaggattcttcgaat 13776560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 231
Target Start/End: Complemental strand, 11382851 - 11382654
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg 133  Q
    |||||||| ||||| | ||||||  |||||||||||||||||||| ||| |||||| | | |||||  |||| |||||| |||| ||||||||||||||     
T  11382851 caagtgtatcaaatcgtttaccagataataaagtgataagtagagtatcatatccacatgaattgtattttcatccaaataattcgcgttacttatttt- 11382753  T
Q  134 taagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaa 231  Q
    ||  |||||||||  ||||||||  |||  |||||||| ||| || |||||||||||||||||||| |||| |||||||||||| |||| ||||||||||    
T  11382752 tagtttgacgataagataaaagagttaaaagttagagatttgcaaattttatctgtttgcaacagagcaag-ttacttgttttttgttgtagaaaagtaa 11382654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 25888328 - 25888224
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||| | |||||||| |||    ||||||||| |||||    
T  25888328 gcggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcgttt----caaacaattcgcgtt 25888233  T
Q  124 acttatttt 132  Q
    |||||||||    
T  25888232 acttatttt 25888224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 214
Target Start/End: Complemental strand, 45621988 - 45621799
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||| | |||||||| |||| | ||||||||||||||||||| |||||||| |||||||| | | |||||||| |||||||||||||||| | ||||    
T  45621988 cggattaagaaagtgtacaaaatcgtttaccaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtttcgtccaaacaattcgtgtta 45621889  T
Q  125 cttattttgtaagttgacgatataataaaa---gataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttt 214  Q
    |||||||| |  |   |  ||| |||||||   ||||||||||||||  ||| ||||||||||||||||||||| | ||||||||||||||||    
T  45621888 cttatttttt--gaacaaaataaaataaaagatgataagggttagag-tttgtaatttttatctgtttgcaacatagcaagtttacttgtttt 45621799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 8503173 - 8503071
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    ||||||||||||||||||| | |||||||||||||| ||||||||||||| ||| |||||| | |||||||| ||||  ||||||||||||||||||| |    
T  8503173 ttaggcaagtgtaccaaatcgtttaccaagtaataacgtgataagtagaggatcatatccacatggattgtcatttcaaccaaacaatttgcgttactaa 8503074  T
Q  129 ttt 131  Q
    |||    
T  8503073 ttt 8503071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 241
Target Start/End: Complemental strand, 23011869 - 23011655
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||| |||||||||||||||||||  |||||||||||||||||| ||||||||  || ||||||| | |||||||| ||| ||| |||||||||||||||    
T  23011869 cggaataggcaagtgtaccaaattttttaccaagtaataaagtg-taagtagattattgtatccacaaggattgtcgttttgtctaaacaatttgcgtta 23011771  T
Q  125 cttattttgtaagttgacgat---ataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggtt 219  Q
     |||||| ||   | ||||||   |||||||||||  ||||||||||| | ||||||||||||||| ||| ||||| | ||||||  |   | |||||||    
T  23011770 tttatttagt--ctagacgatataataataaaagagttaagggttagata-ttgaaatttttatctatttccaacatatcaagttacc---tatttggtt 23011677  T
Q  220 gcagaaaagtaagcagcggtta 241  Q
    | |||||||||| |||||||||    
T  23011676 gtagaaaagtaaccagcggtta 23011655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 12953399 - 12953294
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    |||||||||||||||||||||   ||| ||||||||||||| |||||||||| || || |||| | |||||||| ||||||| |||||||| ||||||||    
T  12953399 gattaggcaagtgtaccaaatcatttatcaagtaataaagtaataagtagagtattgtgtccacatggattgtcgtttcgtcaaaacaattcgcgttact 12953300  T
Q  127 tatttt 132  Q
    ||||||    
T  12953299 tatttt 12953294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 235
Target Start/End: Original strand, 25920303 - 25920455
Alignment:
Q  70 taagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt-gtaagttgacgatataataaaagataagggttagag 168  Q
    ||||||||| |||||||||| | ||||||||||||||||| |||||||  ||||||||||||| ||||||||||   || ||||||| ||              
T  25920303 taagtagagtatcgtatccacatggattgtcctttcgtccgaacaattctcgttacttatttttgtaagttgac---attataaaagtta---------- 25920389  T
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcag 235  Q
     |||| ||||||||||||||||||||||| | | ||||| ||||||||||||||||||||| |||||    
T  25920390 -gttgcaatttttatctgtttgcaacagagcgattttacctgtttttggttgcagaaaagtgagcag 25920455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 25535296 - 25535373
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||||||||||| |||||||   ||||||||||||    
T  25535296 caagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttatttt 25535373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 25887877 - 25887786
Alignment:
Q  158 aagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttc 250  Q
    |||||||||||| ||| ||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||| ||||| |||  |||||||    
T  25887877 aagggttagagatttgcaatttttatctgtttgcaacagagcaag-ttacctatttttggttgcagaaaagtaaccagcgattatgattcttc 25887786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 24091003 - 24090926
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    |||||||||||||||||| ||||  |||||||||| | |||||||||||||||||||||||||   ||||||||||||    
T  24091003 caagtaataaagtgataaatagaatatcgtatccacatggattgtcctttcgtccaaacaattcttgttacttatttt 24090926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 25530572 - 25530656
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||||||||||||||||||| | | ||||| |||||| ||||||| || |||||||||||||||| |||||||||||    
T  25530572 agttgcaatttttatctgtttgcaacagagcgaatttacctgtttt-ggttgcaaaatagtaagcagcggttaggattcttcgaat 25530656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 29143086 - 29143170
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||||||||||||||||||| ||||||||| |  ||||||||| |||||||||| |||||||||  |||||||||||    
T  29143086 agttgcaatttttatctgtttgcaacagagcaagtttacct-attttggttgtagaaaagtaaacagcggttaagattcttcgaat 29143170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 25885563 - 25885460
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    ||||||| | |||||||||| | |||| ||||||||| |||||||| | || |||||||||| | | |||||| |||||||||||||||||| |||||||    
T  25885563 attaggcgattgtaccaaatcgtttacaaagtaataa-gtgataagaatagtatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttactt 25885465  T
Q  128 atttt 132  Q
    |||||    
T  25885464 atttt 25885460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 28770548 - 28770444
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||| ||| |||||||||||   ||||||| |||||||||||||||||||| |||||||||||| | | |||| |||| |||||||||||  || ||||    
T  28770548 gattaagcacgtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatccataggtaatgtcttttcatccaaacaattcacgctact 28770449  T
Q  127 tattt 131  Q
    |||||    
T  28770448 tattt 28770444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 244
Target Start/End: Original strand, 29027514 - 29027706
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacgatat--a 148  Q
    ||||||| |||||||||||| || |||| || |||| || | | |||||  ||| || |||| ||||||||||||||||||  ||||||| ||||||  |    
T  29027514 ttaccaaataataaagtgatgagcagagtattgtattcacatgaattgttgttttgtgcaaataatttgcgttacttattt--taagttgccgatattaa 29027611  T
Q  149 ataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaa 244  Q
    |||||  |||||||||||||||| ||| ||||||||||||||||||| ||| |||| | || ||  |||||||||||||||| || || |||||||||    
T  29027612 ataaaagagataagggttagaga-ttgcaatttttatctgtttgcaagagagcaag-tgacctg-atttggttgcagaaaagaaaacaacggttagaa 29027706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 9774414 - 9774335
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    |||||||| |||||||||||  |||||| |||||||||| | |||||||| ||| |||||| ||||||||||||||||||||    
T  9774414 ttaccaaggaataaagtgat--gtagagtatcgtatccacatggattgtcgttttgtccaaccaatttgcgttacttatttt 9774335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 25530469 - 25530523
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtcc 109  Q
    |||||||||||||||||||||||| |||||||||| | |||||||||||||||||    
T  25530469 caagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtcc 25530523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 28606239 - 28606082
Alignment:
Q  71 aagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacg--atataataaa--agataagggttag 166  Q
    |||||||| ||||||||||   |||||||| ||||||| |||||  | |||||||||||||  ||||||||||  ||||||||||  ||| |||||||||    
T  28606239 aagtagagtatcgtatccactaggattgtcgtttcgtctaaacagctggcgttacttattt--taagttgacgatatataataaaagagacaagggttag 28606142  T
Q  167 agagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaag 228  Q
    ||| ||| ||||||||| ||||| | ||| |||||| |||| ||||||| |||||| |||||    
T  28606141 aga-ttgcaatttttatttgtttacgacataacaag-ttacctgttttttgttgcataaaag 28606082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 45553124 - 45553228
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||||| |  |||||||  | | |||||||| ||| |||||| ||||| | |||| |    
T  45553124 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtaaaatatcgtatttacagggattgtcgttttgtccaagcaattcgtgttaat 45553223  T
Q  127 tattt 131  Q
    |||||    
T  45553224 tattt 45553228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 8447152 - 8447082
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtc 100  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||||  |||||||||| | ||||||||    
T  8447152 ttaggcaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagattatcgtatccacatggattgtc 8447082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 19200237 - 19200135
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    |||||||||||||||||||   ||||||| |||||| ||||||||| ||| |||||||||| | |||||||| |||| ||||||||| |  | |||||||    
T  19200237 ttaggcaagtgtaccaaatcttttaccaaataataatgtgataagt-gagtatcgtatccacaaggattgtcgtttcatccaaacaactcacattactta 19200139  T
Q  129 tttt 132  Q
    ||||    
T  19200138 tttt 19200135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 23933501 - 23933424
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||||||| |||||| ||||| ||| |||| || ||||||||||||||||||| |||||| ||||    
T  23933501 aatttttatctgtttgcaacagagcaagtt-acttggttt-ggtttcacaaaagtaagcagcggttaggattctttgaat 23933424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 17197991 - 17198077
Alignment:
Q  168 gagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||| || ||||||| ||||||| |||| | | || || | |||||||||||||||||||||||||||||||  |||||||||||    
T  17197991 gagttgcaacttttatcagtttgcagcagagcgaattcacctatttttggttgcagaaaagtaagcagcggttaagattcttcgaat 17198077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 26667339 - 26667429
Alignment:
Q  55 caagtaataaagtga-taagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaagttgacg 143  Q
    ||||||||||||| | ||||||||| |||||||||| | ||||| ||||||||| | |||||||  ||||||||| |||||||||||||||    
T  26667339 caagtaataaagttagtaagtagagtatcgtatccacagggattttcctttcgtacgaacaattctcgttacttatttttgtaagttgacg 26667429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 12953290 - 12953225
Alignment:
Q  186 gtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcg 251  Q
    |||||||||| | ||||||||| |||||||||||||||||||||||||| || |||  ||||||||    
T  12953290 gtttgcaacatagcaagtttacatgtttttggttgcagaaaagtaagcaacgattacgattcttcg 12953225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 27418389 - 27418466
Alignment:
Q  56 aagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg 133  Q
    ||||||||||||||||||||||| ||| |||||| | ||||| || ||||  |||||||||| | |||||||||||||    
T  27418389 aagtaataaagtgataagtagagtatcatatccacatggattatcatttcaaccaaacaattcgtgttacttattttg 27418466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 29142983 - 29143068
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaagtt 139  Q
    |||||||||||  ||||||||||| | |||||||| | ||||||||| ||||| | ||||||| |||||||||| |||||||||||    
T  29142983 caagtaataaaacgataagtagagtaccgtatccacatggattgtccgttcgttcgaacaattcgcgttacttatttttgtaagtt 29143068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 5777211 - 5777314
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||||||||||| || || | ||| ||| |||||||||  |||||| || |||| ||| ||| |||||||| ||||||||||||||||  |||||||    
T  5777211 gattaggcaagtgtatcatatcgtttatcaaataataaagtt-taagtaaagtatcgaatctatatggattgtcgtttcgtccaaacaattcacgttact 5777309  T
Q  127 tattt 131  Q
    |||||    
T  5777310 tattt 5777314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 254
Target Start/End: Original strand, 26667464 - 26667515
Alignment:
Q  203 tttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| |||||| |||||||||||||||| |||||||||| |||||||||||    
T  26667464 tttacctgttttcggttgcagaaaagtaaacagcggttaggattcttcgaat 26667515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 30900951 - 30900848
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||   ||||||||||| ||||||| |||||||||||||| ||||| || |||||||     |||||  ||||||| |||||||| ||||||    
T  30900951 cggattaggcataggtaccaaattgtttaccaaataataaagtgataactagagtattgtatccacgtatattgttgtttcgtctaaacaattcgcgtta 30900852  T
Q  125 ctta 128  Q
    ||||    
T  30900851 ctta 30900848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 17889929 - 17890034
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||  |||||||||||||| | |||| || ||||| |||| ||||||| | ||| ||| |||| |||||||| |||||  ||||||||||||||||    
T  17889929 cggattatacaagtgtaccaaatcgtttactaaataatacagtg-taagtagggtatcatattcatagggattgtcgtttcgatcaaacaatttgcgtta 17890027  T
Q  125 cttattt 131  Q
     ||||||    
T  17890028 attattt 17890034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 25535398 - 25535482
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||||||| ||||||||||    | ||||| || ||||||||||| ||||||||||||||||| | |||||||||||    
T  25535398 agttgcaatttttatctatttgcaacagcgtgaatttacctg-ttttggttgcaaaaaagtaagcagcggttgggattcttcgaat 25535482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 45553260 - 45553348
Alignment:
Q  163 ttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||| ||| ||||||||||||||||||||| | |||| |||| || |||||||||||| || || |||||||||||| |||||| ||||    
T  45553260 ttagagatttgcaatttttatctgtttgcaacatagcaag-ttacctg-ttttggttgcag-aacgttagcagcggttaggattctttgaat 45553348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 20173405 - 20173352
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagag 78  Q
    |||||||||| ||||||||||||| | ||||||||| ||||||||||||| ||||    
T  20173405 gcggattaggaaagtgtaccaaatcg-ttaccaagttataaagtgataagcagag 20173352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 21078685 - 21078627
Alignment:
Q  73 gtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    |||||| |||| ||||| | |||||||| ||||||||||||||||| |||| |||||||    
T  21078685 gtagagtatcgcatccacaaggattgtcgtttcgtccaaacaatttacgttgcttattt 21078627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 12557811 - 12557743
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattg 98  Q
    |||||||||||||||||||   |||||||||||||||||| ||||||||  |||| ||||| | ||||||    
T  12557811 ttaggcaagtgtaccaaatcttttaccaagtaataaagtg-taagtagaatatcgaatccacaaggattg 12557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 17890074 - 17890137
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagca 234  Q
    ||||| ||||||||| ||||||||||||| |||| |||| || ||||||||||||||| |||||||    
T  17890074 agttgcaatttttatatgtttgcaacagagcaag-ttacctg-ttttggttgcagaaatgtaagca 17890137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 5792823 - 5792926
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    |||||||||||||| |||||| | |||  ||||||||| ||| ||||||  | |||||||| | | ||||| || |||||||||||| |||  |||||||    
T  5792823 gattaggcaagtgtgccaaatcgtttattaagtaataacgtg-taagtatggtatcgtatctacatggattatcatttcgtccaaaccattcacgttact 5792921  T
Q  127 tattt 131  Q
    |||||    
T  5792922 tattt 5792926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 25939180 - 25939251
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||||||||||||| |||||| || |||||||||||| ||||| || ||||  ||||||||||  ||||||||    
T  25939180 caagtaataaagtg-taagtaaagtatcgtatccataaggattttcgtttcaaccaaacaattcacgttactt 25939251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 32440095 - 32440040
Alignment:
Q  33 gcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatcca 89  Q
    ||||||||||||||||| |||||||| ||||||||| ||| || || ||||||||||    
T  32440095 gcaagtgtaccaaattgtttaccaagaaataaagtg-taaataaagtatcgtatcca 32440040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 5e-68; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 24 - 254
Target Start/End: Complemental strand, 13315099 - 13314870
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||| |||||||||| ||   ||||||||||||||||||||||||| || |||||||||| | ||||| |  |||||||||||||||| |||||    
T  13315099 gcggattagg-aagtgtaccagatcatttaccaagtaataaagtgataagtatagtatcgtatccacatggatttttgtttcgtccaaacaattcgcgtt 13315001  T
Q  124 acttattttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||| ||||||||| |||||||||| |||||| ||||| |||||||||||||||    
T  13315000 acttattttataagttgacgatataataaaagataaacgttagagagttgcaatttttatatgtttgcaactgaacaaatttacctgtttttggttgcag 13314901  T
Q  224 aaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||| ||||||  |||||||||||    
T  13314900 aaaagtaagcaacggttaagattcttcgaat 13314870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 24 - 254
Target Start/End: Complemental strand, 24114390 - 24114162
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||  | |||||||| |||||||||||||| |||||||    
T  24114390 gcggattaggcaagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtatccgcagggattgtcgtttcgtccaaacaacttgcgtt 24114291  T
Q  124 actta-ttttgtaagttgacgatataataaaagataagggttagaga-gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    ||||| |||||||||||||||||   ||||||||||||||||| | | |||| |||||||||||||||||| |||| ||||||||| || |||||||  |    
T  24114290 acttatttttgtaagttgacgat---ataaaagataagggttataaaggttgcaatttttatctgtttgcagcagagcaagtttacctg-ttttggtatc 24114195  T
Q  222 agaaaagtaagcagcggttagaattcttcgaat 254  Q
     |||||||||||||||||||| |||||||||||    
T  24114194 tgaaaagtaagcagcggttaggattcttcgaat 24114162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 26 - 250
Target Start/End: Complemental strand, 29382467 - 29382243
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| | |||||||| |||| |||||||||||||||||||    
T  29382467 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaatttgcgttac 29382368  T
Q  126 tta-ttttgtaag-ttgacgatataataaaagataagggttagagag-ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    ||| ||||||||| ||||||||   ||||||| ||| ||||||| || ||| ||||||||||||||||||||| | ||||| ||| | ||||||||||||    
T  29382367 ttatttttgtaagtttgacgat---ataaaagttaatggttagaaagcttgcaatttttatctgtttgcaacatagcaagtgtacctatttttggttgca 29382271  T
Q  223 gaaaagtaagcagcggttagaattcttc 250  Q
    ||||||||||||| |||||| |||||||    
T  29382270 gaaaagtaagcagtggttaggattcttc 29382243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 254
Target Start/End: Original strand, 24269592 - 24269817
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||||||||| | |||||||| ||||||||||||||||  | ||| |    
T  24269592 gattaggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacagggattgtcgtttcgtccaaacaattcacattatt 24269690  T
Q  127 ta-ttttgtaag-ttgacgatataataaaagataagggttag-agagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    || ||||||||| |||||| |   |||||| ||||| ||| | | ||||| ||| |||||||||||||||||| |  ||||||| |||||||||||||||    
T  24269691 tatttttgtaagtttgacggt---ataaaaaataagagtttgaatagttgcaatctttatctgtttgcaacag-agtagtttacctgtttttggttgcag 24269786  T
Q  224 aaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||| |||||||||||    
T  24269787 aaaagtaagcagcggttaggattcttcgaat 24269817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 242
Target Start/End: Complemental strand, 25182535 - 25182318
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| |||||| ||||||||  ||||||| ||||||||||| |||||||| ||||||| || | |||||||| ||||||| ||||   ||||||||    
T  25182535 cggattagacaagtggaccaaattatttaccaaataataaagtgacaagtagagtatcgtattcacatggattgtcatttcgtctaaactgcttgcgtta 25182436  T
Q  125 cttattttgtaagttgacgatat--aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  ||||||||||||||  ||||||  |||||||||||||||| ||| ||||||||||| ||||||||||| |||| |||| ||||||||||||    
T  25182435 cttattt--taagttgacgatataaaataaaagagataagggttagaga-ttgcaatttttatctatttgcaacagagcaag-ttacctgtttttggttg 25182340  T
Q  221 cagaaaagtaagcagcggttag 242  Q
    |||||||| || ||| ||||||    
T  25182339 cagaaaaggaaacagtggttag 25182318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 245
Target Start/End: Original strand, 14528141 - 14528360
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||| |||||| |||||||||| |  ||||||| |||||||||||||| |  |||||    
T  14528141 cggattaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagtatcgtatccacatagattgtcgtttcgtccaaacaactcacgtta 14528240  T
Q  125 cttattttgtaagttgacgatat--aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  |||  |||||||||  ||||||  || ||||||||||||| ||| |||||||| |||||||||||| | ||||||  || |  ||||||||    
T  14528241 cttattt--taaactgacgatataaaataaaatagttaagggttagaga-ttgcaatttttagctgtttgcaacaaagcaagttacctgg--tttggttg 14528335  T
Q  221 cagaaaagtaagcagcggttagaat 245  Q
    |||||||||||||||||||| ||||    
T  14528336 cagaaaagtaagcagcggtttgaat 14528360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 84 - 248
Target Start/End: Original strand, 14626081 - 14626244
Alignment:
Q  84 tatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacgatataataaaagataagggttagagagttgaaatttttat 183  Q
    |||||||| |||||| | |||||||||||||| ||| |||||||||||| || ||||| |||||||||||| |||||||||||||||||| |||||||||    
T  14626081 tatccatagggattgacttttcgtccaaacaacttgtgttacttatttttta-gttgaagatataataaaatataagggttagagagttgcaatttttat 14626179  T
Q  184 ctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattct 248  Q
     |||||| |  ||| || |||||| | |||||||||||||||||||||||||| ||||| |||||    
T  14626180 gtgtttggattagagcatgtttacctttttttggttgcagaaaagtaagcagcagttaggattct 14626244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 247
Target Start/End: Complemental strand, 17101990 - 17101790
Alignment:
Q  35 aagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttat-tttg 133  Q
    ||||||| ||||| | |||||||||||||||||||||||||||| |||||||||||| |||||||| |||| |||||||||| || ||||||||| ||||    
T  17101990 aagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaaacaatatgtgttacttatatttg 17101891  T
Q  134 taagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagc 233  Q
    |||||||||| |   ||||||||||           |||  ||||||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||||    
T  17101890 taagttgacggt---ataaaagata----------ggttccaatttttatctgtttgcaacagagcaagtttacctgtttttgattgcaaaaaagtaagc 17101804  T
Q  234 agcggttagaattc 247  Q
    || |||||| ||||    
T  17101803 agtggttaggattc 17101790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 231
Target Start/End: Original strand, 6884945 - 6885155
Alignment:
Q  20 gtgggcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttg 119  Q
    |||| |||||||||||||||||| |||| |  |||| |||||||||||||||||| ||| |||||||| | | |||||||| |||||||||||||| |||    
T  6884945 gtggtcggattaggcaagtgtactaaatcgtgtacccagtaataaagtgataagt-gagtatcgtatctacatggattgtcgtttcgtccaaacaacttg 6885043  T
Q  120 cgttacttattttgtaag-ttgacgatataataaa-agataaggg-ttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttg 216  Q
    || |||||||||  |||| ||||||||| |||||| ||||||||| ||||||| ||| |||||||||||||||| || |||  ||| |||| ||||||||    
T  6885044 cgctacttattt--taagtttgacgataaaataaagagataagggtttagagatttgcaatttttatctgtttgtaatagagtaag-ttacctgtttttg 6885140  T
Q  217 gttgcagaaaagtaa 231  Q
    |||||||||| ||||    
T  6885141 gttgcagaaatgtaa 6885155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 35 - 241
Target Start/End: Complemental strand, 18448639 - 18448433
Alignment:
Q  35 aagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg- 133  Q
    |||||||||||||   ||||||||||||||||| |||| ||||| |||||||| |||  ||||||| ||| ||||||||||||  |||||||||||||      
T  18448639 aagtgtaccaaatcatttaccaagtaataaagtaataattagagcatcgtatcaatagagattgtcgttttgtccaaacaattctcgttacttattttta 18448540  T
Q  134 taagttgacgatataataaaagataag-ggttagagagt--tgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagta 230  Q
    ||||||||||||||||   |||||||  ||||||| |||  || | ||||||||||||||||||||| |||||| || |||||||||||||| |||||||    
T  18448539 taagttgacgatataa---aagataaatggttagaaagtcttgcagtttttatctgtttgcaacagagcaagtt-acctgtttttggttgcataaaagta 18448444  T
Q  231 agcagcggtta 241  Q
    |||| ||||||    
T  18448443 agcaacggtta 18448433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 34497109 - 34497329
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    |||||||||||| || ||||| | |||||||||||||||||||| ||||||| ||||||||||||  || |||| |||||||||||||||   |||||||    
T  34497109 gattaggcaagtctatcaaatcgtttaccaagtaataaagtgattagtagagtatcgtatccatagagactgtcgtttcgtccaaacaatccacgttact 34497208  T
Q  127 tattttgtaagttgacgatat--aataaaaga---taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    |||||  ||| ||||||||||  |||||||||    |||||||||||| ||| ||||||||||| ||||||||| | || |||  || |  |||| ||||    
T  34497209 tattt--taaattgacgatataaaataaaagagttaaagggttagaga-ttgcaatttttatctttttgcaacatagcatgttacctgg--tttgcttgc 34497303  T
Q  222 agaaaagtaagcagcggttagaattc 247  Q
    ||||||||||||||||||||| ||||    
T  34497304 agaaaagtaagcagcggttaggattc 34497329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 235
Target Start/End: Original strand, 13697857 - 13698055
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||||||||||||||||||| | ||||||| |||||||||       |||| |||||||||| | ||||| || ||||||||||||||  ||||||||||    
T  13697857 attaggcaagtgtaccaaatcgtttaccaattaataaagt-------agagtatcgtatccacaaggattttcgtttcgtccaaacaacctgcgttactt 13697949  T
Q  128 attttgtaagttgacgatata----ataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    ||||  |||||||||||||||    | || |||||||||||||||| ||| ||||||||||| ||||||||||| |||| |||| ||  |||||||||||    
T  13697950 attt--taagttgacgatataaaatacaagagataagggttagaga-ttgcaatttttatctctttgcaacagagcaag-ttacctg--tttggttgcag 13698043  T

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Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 228
Target Start/End: Original strand, 19786723 - 19786926
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| ||||| |||||||| | ||||||||||||||||||| ||||| || ||| |||||||| ||| |||| |||||||||||||| | | ||||    
T  19786723 cggattagacaagtataccaaatcgtttaccaagtaataaagtgacaagtaaagtatcatatccatagggactgtcgtttcgtccaaacaactcgtgtta 19786822  T
Q  125 cttattttgtaagttgacgatat--aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    ||| |||  |||||||| |||||  ||||||  ||||||  |||||||| ||| ||||||||||||||||||||||| |||| |||| |||||||| |||    
T  19786823 cttgttt--taagttgatgatataaaataaaagagataaaagttagaga-ttgtaatttttatctgtttgcaacagagcaag-ttacatgtttttgattg 19786918  T
Q  221 cagaaaag 228  Q
     |||||||    
T  19786919 tagaaaag 19786926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 56 - 240
Target Start/End: Original strand, 27659468 - 27659642
Alignment:
Q  56 aagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaagttgacgatataataaaa 154  Q
    ||||||||||||||||||||||| |||||||| | | |||||||| ||||||||||||| |  | |||||||| |||||||||||||||||   ||||||    
T  27659468 aagtaataaagtgataagtagagtatcgtatctacaaggattgtcgtttcgtccaaacattccgagttacttatttttgtaagttgacgat---ataaaa 27659564  T
Q  155 gataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggtt 240  Q
    |||||||        |||| |||||| |||| ||||||| ||| ||||||||| ||||||| ||||||||||| ||||||||||||    
T  27659565 gataagg--------gttgcaattttaatctatttgcaaaagagcaagtttacctgttttttgttgcagaaaattaagcagcggtt 27659642  T

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Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 53 - 236
Target Start/End: Original strand, 17509266 - 17509447
Alignment:
Q  53 accaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg-taagttgacgatataata 151  Q
    |||||||||||||||||||||||||| ||| |||||| | ||||||| |||||||||||||||||  | |||||||||||  |||||||||| ||||| |    
T  17509266 accaagtaataaagtgataagtagagtatcatatccacatggattgttctttcgtccaaacaattctctttacttatttttataagttgacggtataaaa 17509365  T
Q  152 aaagataagggttaga-gagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagc 236  Q
    |    ||||||||| | || ||| |||||| | |||||||||| ||| ||||||||| |||||||| ||||| |||||||||||||    
T  17509366 at---taagggttaaaagacttgcaattttcacctgtttgcaatagagcaagtttacctgtttttg-ttgcaaaaaagtaagcagc 17509447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 254
Target Start/End: Complemental strand, 24110763 - 24110548
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||| ||||||||| |||||   ||||||||||||||| |||||||||||| |||||||||| |  |||| || ||| |||||||||| ||         
T  24110763 gcggattatgcaagtgtatcaaatcatttaccaagtaataaaatgataagtagagtatcgtatccacaacgattttcattttgtccaaacaagtt----- 24110669  T
Q  124 acttattttgtaagttgacgatataataaaagataagggttagaga-gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
          ||||||||||||||||||||   || |||||||||||| | |||| |||||| ||||||||||||||||  |||||||  |||||| |||||||    
T  24110668 ------tttgtaagttgacgatataa---aacataagggttagaaaagttgcaatttt-atctgtttgcaacagaggaagtttatctgtttt-ggttgca 24110580  T
Q  223 gaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||| |||||| ||| |||||||    
T  24110579 gaaaagtaagcaggggttaggattattcgaat 24110548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 30806604 - 30806436
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgta-----tccatacggattgtcctttcgtccaaacaatttg 119  Q
    ||||||||||||||||| ||||| | |||  ||||||||||||||||||||||| ||||||     |||| | |||||||| |||| |||||||||||||    
T  30806604 cggattaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatccaaacaatttg 30806505  T
Q  120 cgttacttattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgt 187  Q
    ||||||||||||  ||  ||||||||||  |||||||||  ||||||||||||| ||| |||||||||||||    
T  30806504 cgttacttattt--tagtttgacgatataaaataaaagagttaagggttagaga-ttgcaatttttatctgt 30806436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 15238794 - 15238896
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||||||||||||| ||||||| ||||||||||| ||| |||||||||||  |||||||||| | | |||||| ||||||| |||||||| |||||||||    
T  15238794 attaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagtagattatcgtatccacatgaattgtcgtttcgtctaaacaattcgcgttactt 15238893  T
Q  128 att 130  Q
    |||    
T  15238894 att 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 30122261 - 30122156
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||||||||||||||  ||| ||||||||||||||| ||||||||| ||| |||||| | |||||||| ||| |||||||||||| || |||    
T  30122261 cggattaggcaagtgtaccaaatcactttccaagtaataaagtg-taagtagagtatcatatccacatggattgtcattttgtccaaacaattcgcatta 30122163  T
Q  125 cttattt 131  Q
    |||||||    
T  30122162 cttattt 30122156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 132
Target Start/End: Original strand, 2637603 - 2637697
Alignment:
Q  38 tgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    |||| ||||||| ||| |||||||||||||||||||||||| |||||||||| | |||||||| ||||||| |||||| |  |||||||||||||    
T  2637603 tgtatcaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacaactcccgttacttatttt 2637697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 5850933 - 5851039
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| |||||||||| ||| | |||||||||||||||||||||||||||| |||||||||| |  ||||||| ||||  |||||||||  | ||||    
T  5850933 cggattagtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaatccgtgtta 5851032  T
Q  125 cttattt 131  Q
    |||||||    
T  5851033 cttattt 5851039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 14075590 - 14075692
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    ||||| || ||||||||||   ||||||||||| |||||||||||||||  |||||||||| | |||||||| ||||  ||||||||| |||||||||||    
T  14075590 ttaggaaattgtaccaaatcttttaccaagtaagaaagtgataagtagactatcgtatccacatggattgtcgtttcaaccaaacaatgtgcgttactta 14075689  T
Q  129 ttt 131  Q
    |||    
T  14075690 ttt 14075692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 253
Target Start/End: Complemental strand, 44011116 - 44010903
Alignment:
Q  39 gtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagt 138  Q
    ||||||||| | |||| ||||||||||||| ||||||||| |||||||||| | |||||||| ||||||| |||  |||  |||||| ||||| ||   |    
T  44011116 gtaccaaatcgtttacgaagtaataaagtg-taagtagagtatcgtatccacatggattgtcgtttcgtcaaaatgattcacgttacatatttggt---t 44011021  T
Q  139 tgacgatat---aataaaagataagggttagagag-ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagca 234  Q
    | || | ||   ||||||||||  |  | | |||| ||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| |||||| |    
T  44011020 taacaaaataaaaataaaagatttgaatgatagagattgcaatttttatatgtttgcaacagaacaag-ttacatgtttttggttgcagaagagtaagta 44010922  T
Q  235 gcggttagaattcttcgaa 253  Q
    |||||||  ||||||||||    
T  44010921 gcggttaagattcttcgaa 44010903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 18569198 - 18569262
Alignment:
Q  176 atttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggtta 241  Q
    |||||||||||||||||||| | | |||||||||||||| ||||||||||||||||||||||||||    
T  18569198 atttttatctgtttgcaacatagcgagtttacttgtttt-ggttgcagaaaagtaagcagcggtta 18569262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 24904630 - 24904731
Alignment:
Q  30 taggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttat 129  Q
    ||||||||||||||||||   ||||||| |||||||||||||||||||| ||| |||||| |  ||||||| ||||||| ||||||||  | ||||||||    
T  24904630 taggcaagtgtaccaaatcatttaccaaataataaagtgataagtagagtatcatatccacagtgattgtcgtttcgtctaaacaattcacattacttat 24904729  T
Q  130 tt 131  Q
    ||    
T  24904730 tt 24904731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 242
Target Start/End: Original strand, 21314641 - 21314832
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacgatataat 150  Q
    |||||||||||||||||||||||||| | |||||||| | | ||||| || |||||| ||||||||   ||||||||||||  | ||||  | |||||||    
T  21314641 ttaccaagtaataaagtgataagtagtgtatcgtatctacagggattttcgtttcgtgcaaacaatactcgttacttattt--ttagttaccaatataat 21314738  T
Q  151 aaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttag 242  Q
    | ||||  ||| |||||||   ||| ||| |||||||| || ||| ||| ||||||| | ||||||| ||| || ||||||||| |||||||||    
T  21314739 agaagagttaaaggttagaagtttgcaatatttatctgcttacaatagagcaagtttgcctgtttttagttacataaaagtaagtagcggttag 21314832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 17976611 - 17976717
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||||||| ||||||   ||| |||||||||||||||||||||||| |||||||||| |  |||| || ||||||| | ||| || || |||    
T  17976611 cggattaggcaagtgtgccaaatcatttatcaagtaataaagtgataagtagagtatcgtatccacaaagattttcgtttcgtctacacatttcgcatta 17976710  T
Q  125 cttattt 131  Q
    |||||||    
T  17976711 cttattt 17976717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 231
Target Start/End: Complemental strand, 28276864 - 28276660
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||| ||||| | ||||||| ||| |||||||||||| ||| |||||||||||| ||||| |  ||| ||||||| || |    |||    
T  28276864 cggattaggcaagtgtatcaaatcgtttaccaaataaaaaagtgataagt-gagtatcgtatccatagggattatagttttgtccaaataactcctctta 28276766  T
Q  125 cttattttgtaagttgacgatataataaa-agataagggtt-agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||||   |||||||| ||| |||||| |||||||| || ||||| ||| ||||||||||| |||  |||||| |||| |||||||||||  | || |    
T  28276765 cttattt--gaagttgacaataaaataaagagataaggattaagagatttgcaatttttatctatttaaaacagagcaag-ttacttgttttaagctgta 28276669  T
Q  223 gaaaagtaa 231  Q
    |||||||||    
T  28276668 gaaaagtaa 28276660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 31288354 - 31288454
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    ||||| ||||||||||||| | |||||||||||||||||| |||||| || |||||||||||| |||||||| ||||  |||||  ||| |||||| |||    
T  31288354 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtg-taagtaaagtatcgtatccatagggattgtcttttcaaccaaatcattcgcgttaatta 31288452  T
Q  129 tt 130  Q
    ||    
T  31288453 tt 31288454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 26394644 - 26394577
Alignment:
Q  186 gtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||| | ||||||||| |||||| ||||||||||||||||||| ||||||| |||||||||||    
T  26394644 gtttgcaacaaagcaagtttacctgtttt-ggttgcagaaaagtaagcaacggttaggattcttcgaat 26394577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 26008019 - 26008090
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtc 100  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||| || ||||| | | ||||||||    
T  26008019 ttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatggtatcaagagggattgtc 26008090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 30783835 - 30783784
Alignment:
Q  38 tgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatcca 89  Q
    |||||||||| | |||||||||||||||||||||||||||| ||||||||||    
T  30783835 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatcca 30783784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 16404036 - 16404121
Alignment:
Q  168 gagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||| ||||||||| ||||||||||||| | | ||||| | |||| || ||||||||| |||||||||||||| |||||||||||    
T  16404036 gagttgcaatttttatttgtttgcaacagagcgaatttacctatttt-ggctgcagaaaaataagcagcggttaggattcttcgaat 16404121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 24644984 - 24645042
Alignment:
Q  177 tttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcag 235  Q
    ||||||||| ||||||||| |||||  |||| |||||||||||||||||||||||||||    
T  24644984 tttttatctatttgcaacataacaaagttacctgtttttggttgcagaaaagtaagcag 24645042  T

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Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 25226137 - 25226235
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    ||||||||| |||| | ||| |||||||||||||||||||| ||| |||||||  | | ||||| |  |||| ||||||||||||||||||| ||||||    
T  25226137 caagtgtactaaatcgtttatcaagtaataaagtgataagttgagtatcgtatatacagggattattgtttcctccaaacaatttgcgttacatatttt 25226235  T

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Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 30235370 - 30235419
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagta 75  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||||||    
T  30235370 ggattaggcaagtgtacaaaatcgtttaccaagtaataaagtgataagta 30235419  T

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Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 24644832 - 24644935
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||| |||||||| |||||||  |||||||||||||||||| ||||||||| || ||||||| | ||||| || |||  |||||| |||| || |||||    
T  24644832 gattatgcaagtgtgccaaattatttaccaagtaataaagtg-taagtagagtattgtatccacatggattatcgttttttccaaataattcgcattact 24644930  T
Q  127 tattt 131  Q
    |||||    
T  24644931 tattt 24644935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 5053026 - 5052964
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatcca 89  Q
    ||||||||||||||||||||| | |||||  ||||||||||| ||||||||| || |||||||    
T  5053026 gattaggcaagtgtaccaaatcgtttaccgggtaataaagtgctaagtagagtattgtatcca 5052964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 19264167 - 19264237
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggt 239  Q
    ||||| ||||||||||| ||||||||||| ||||||||  | |||||||||| | ||| ||||||||||||    
T  19264167 agttgtaatttttatctttttgcaacagagcaagtttatctatttttggttgaaaaaaggtaagcagcggt 19264237  T

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Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 23893176 - 23893115
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaa 231  Q
    ||||| ||||||||||||||||||||| | ||| ||||| || ||||||||||||||||||||    
T  23893176 agttgcaatttttatctgtttgcaacaaagcaaatttacctg-ttttggttgcagaaaagtaa 23893115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 9642021 - 9642098
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||||| |||||||||| ||| || ||||||||| | ||||||||| || ||||||||||| ||||||| ||||    
T  9642021 aatttttatctgcttgcaacagagcaaatt-acttgttttag-ttgcagaaatgttagcagcggttaaaattctttgaat 9642098  T

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Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 16403952 - 16404011
Alignment:
Q  73 gtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    |||||| |||||||||| | ||||||||||||||||| |||||||   ||||||||||||    
T  16403952 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttt 16404011  T

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Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 26615339 - 26615269
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttc 105  Q
    |||||||| ||||| | ||||||| |||||||||||||||||||| || ||||||||| | |||||| ||||    
T  26615339 caagtgtatcaaatcg-ttaccaactaataaagtgataagtagagtattgtatccatatgaattgtcgtttc 26615269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 19264064 - 19264149
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaagtt 139  Q
    ||||||||||||||||||||  || ||||||| |||| ||||||| ||||| || ||  ||||  ||||||||| |||||||||||    
T  19264064 caagtaataaagtgataagttaagtatcgtattcatatggattgttctttcatcaaattaattctcgttacttatttttgtaagtt 19264149  T

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Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 26394693 - 26394646
Alignment:
Q  121 gttacttattttgtaagttgacgatataataaaaga--taagggttaga 167  Q
    |||||||||||| |||||||||||||||||||||||  |||||||||||    
T  26394693 gttacttatttt-taagttgacgatataataaaagagttaagggttaga 26394646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 7983724 - 7983801
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||| ||| | ||||||  || ||||  ||||||||||||||||||| ||| ||| |||||| ||||    
T  7983724 aatttttatctgtttgcgacatagcaagttgcctggttt--ggttgcagaaaagtaagcaacgggtaggattctttgaat 7983801  T

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Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 24723520 - 24723484
Alignment:
Q  53 accaagtaataaagtgataagtagagaatcgtatcca 89  Q
    ||||||||||||||||||||||| || ||||||||||    
T  24723520 accaagtaataaagtgataagtaaagtatcgtatcca 24723484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 28 - 253
Target Start/End: Complemental strand, 13128978 - 13128753
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||||||||||||||||||| | ||||||||||||||| |||||||||||| || ||||||||| |||||||| |||||||||||||| | |||||||||    
T  13128978 attaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaactcgcgttactt 13128879  T
Q  128 attttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgttttt-ggttgcagaaa 226  Q
    ||||| | ||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| ||||||  |||||| | ||||||| |||||||||||    
T  13128878 atttttttagttgaccatataataaaagataagggttagagagttgcaatttttatttgtttggaacagagtaagtttgcctgtttttcggttgcagaaa 13128779  T
Q  227 agtaagcagcggttagaattcttcgaa 253  Q
    |||||||||| ||||| ||||||||||    
T  13128778 agtaagcagc-gttagcattcttcgaa 13128753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 32 - 242
Target Start/End: Original strand, 17216816 - 17217028
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttat-t 130  Q
    ||||| |||||||||| | |||||||| ||||||||||||||||||| ||| |||||| | |||||||| ||||||||||||||||  |||||||||| |    
T  17216816 ggcaaatgtaccaaatcgtttaccaagcaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattctcgttacttatat 17216915  T
Q  131 ttgtaagttgacgatataataaaagat--aagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaag 228  Q
    ||||||||||| ||||||||| |||||  |||||||||| ||||| ||||||||||||||||||||||| ||||||||| || ||||||||| |||||||    
T  17216916 ttgtaagttgatgatataatacaagataaaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtttacatg-ttttggttgtagaaaag 17217014  T
Q  229 taagcagcggttag 242  Q
    |||||| |||||||    
T  17217015 taagcaacggttag 17217028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 24 - 254
Target Start/End: Complemental strand, 19562286 - 19562053
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||| |||||||||||||||   ||||||||||||||||||||||||| || ||||| |||| | | |||||| |||| |||||||||||||  ||    
T  19562286 gcggattaagcaagtgtaccaaatcatttaccaagtaataaagtgataagtaaagtatcgtgtccacaagtattgtcgtttcatccaaacaatttgtatt 19562187  T
Q  124 acttattttgtaagtt-gacgatataataaaagataa--gggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    ||||||||| |||||| |||  |||||||||||||||  ||||||   | ||| ||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  19562186 acttattttttaagtttgacattataataaaagataaaagggttatttaattgcaatttttatctctttgcaacagagcaagtttacctgtttttggttg 19562087  T
Q  221 cagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||| ||||||||||||||||||||||    
T  19562086 cagaaaagtaatcagcggttagaattcttcgaat 19562053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 33 - 254
Target Start/End: Original strand, 13908854 - 13909075
Alignment:
Q  33 gcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttt 131  Q
    ||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| | |||||||| |||||||||||||||| | |||||||| |||    
T  13908854 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttatttt 13908953  T
Q  132 tgtaa-gttgacgatataataaaagataagggttagagag--ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaag 228  Q
    |||||  ||||||||   ||||||| ||| ||||||| ||  ||| ||||||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  13908954 tgtaattttgacgat---ataaaag-taaaggttagaaagtcttgcaatttttatctgtttgcaacagagcaagtttacctgtttttggttgcaaaaaag 13909049  T
Q  229 taagcagcggttagaattcttcgaat 254  Q
    |||||||||||||| |||||| ||||    
T  13909050 taagcagcggttaggattctttgaat 13909075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 34 - 254
Target Start/End: Original strand, 15164768 - 15164986
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tttt 132  Q
    |||||||||||||| | |||||||||||| || | ||||| |||| |||||||||| | |||||||| ||||||||||||||||||||||||||| ||||    
T  15164768 caagtgtaccaaatcgtttaccaagtaatcaattaataagcagagtatcgtatccacagggattgtcatttcgtccaaacaatttgcgttacttattttt 15164867  T
Q  133 gtaag-ttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaa 231  Q
    ||||| ||||||||   ||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||||||||| || ||||||||||||||||||||    
T  15164868 gtaagtttgacgat---ataaaagttaagggttagagagttgcaatttttatttgtttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaa 15164963  T
Q  232 gcagcggttagaattcttcgaat 254  Q
    |  | ||||||  ||||||||||    
T  15164964 gtggaggttagttttcttcgaat 15164986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 51 - 254
Target Start/End: Complemental strand, 17337216 - 17337013
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacgatataat 150  Q
    ||||| |||||||| ||||||||||||| |||||||||| |  ||||||| ||||||||||||||||||||||||||||||  | |||||||||||||||    
T  17337216 ttaccgagtaataacgtgataagtagagtatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttattt--ttagttgacgatataat 17337119  T
Q  151 aaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattct 248  Q
    ||||||   ||||||| |||| ||| ||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||| | |||  |||||    
T  17337118 aaaagagtaaagggtttgagatttgcaatttttatctgtttacaacagagcaagtttacctgtttttggttgcataaaagtaagcagagattatgattct 17337019  T
Q  249 tcgaat 254  Q
    ||||||    
T  17337018 tcgaat 17337013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 35 - 254
Target Start/End: Original strand, 7582299 - 7582518
Alignment:
Q  35 aagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt-g 133  Q
    |||||||||||||   |||||||||||||||||||||||||||| ||| |||||| | |||||||  ||||||||||||||| ||| ||||||||||| |    
T  7582299 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaatctgcattacttattttgg 7582398  T
Q  134 taag-ttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaag 232  Q
    |||| |||||||||||| || | | |||| |||| || ||| |||||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  7582399 taagtttgacgatataa-aagataaaaggcttag-gatttgcaattttcatctgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataag 7582496  T
Q  233 cagcggttagaattcttcgaat 254  Q
    ||| |||||| |||||| ||||    
T  7582497 cagtggttaggattctttgaat 7582518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 242
Target Start/End: Original strand, 17671994 - 17672210
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| || ||||||| | |||||||  ||||||| |||||| | ||||||    
T  17671994 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacatggattgttgtttcgtctaaacaactcgcgtta 17672093  T
Q  125 cttattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  |||||| |||||||  |||||||||  ||| ||||||||| ||| ||||||||||||||||||||||| ||||||  || |  ||||||||    
T  17672094 cttattt--taagttaacgatataaaataaaagagttaaaggttagaga-ttgcaatttttatctgtttgcaacagagcaagttacctgg--tttggttg 17672188  T
Q  221 cagaaaagtaagcagcggttag 242  Q
    |||||||||||| ||| |||||    
T  17672189 cagaaaagtaagaagcagttag 17672210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 33 - 254
Target Start/End: Original strand, 17709757 - 17709974
Alignment:
Q  33 gcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttt 131  Q
    ||||||||||||||| | |||||||||||||||||||||||||||| || ||||||||| ||||||| |||| |||   ||||||  ||||||||| |||    
T  17709757 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccatagggattgttcttttgtc---acaattctcgttacttatttt 17709853  T
Q  132 tgtaagttgacgatataataaaagataagggtt--agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagt 229  Q
    | ||| ||||||||   ||||||||||||||||  | ||| ||||||||||||| ||||||||||||| ||||||||| || ||||||||||| ||||||    
T  17709854 tataatttgacgat---ataaaagataagggttaaaaagacttgaaatttttatatgtttgcaacagagcaagtttacctg-ttttggttgcaaaaaagt 17709949  T
Q  230 aagcagcggttagaattcttcgaat 254  Q
    ||| ||| ||||| |||||||||||    
T  17709950 aagtagctgttaggattcttcgaat 17709974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 242
Target Start/End: Original strand, 14648889 - 14649103
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| | |||||||| |||| || ||| |  | | ||||||    
T  14648889 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttcttctaaatagctcgtgttact 14648987  T
Q  127 tattttgtaagttgacgatat--aataaaag--ataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||  ||||||||||||||  ||||||||  |||||||||||||| ||  ||||||||||||||||||||||| |||| ||||||||||||||||| |    
T  14648988 tattt--taagttgacgatataaaataaaagacataagggttagaga-tttcaatttttatctgtttgcaacagagcaag-ttacttgtttttggttgta 14649083  T
Q  223 gaaaagtaagcagcggttag 242  Q
    |||||| || || |||||||    
T  14649084 gaaaaggaaacaacggttag 14649103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 204
Target Start/End: Complemental strand, 12578372 - 12578193
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    ||||||||||||||||||||||   ||||||| |||||||||||||| ||||| |||||||||| | |||||||| ||| |||||||||||||||||| |    
T  12578372 ggattaggcaagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtatccacatggattgtcgttttgtccaaacaatttgcgtttc 12578273  T
Q  126 ttattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtt 204  Q
    ||||||  ||||||||||||||  |||||||||   |||||||||||| ||  ||||||||||||||||||||||| ||||||    
T  12578272 ttattt--taagttgacgatataaaataaaagagtaaagggttagaga-ttacaatttttatctgtttgcaacagagcaagtt 12578193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 216
Target Start/End: Complemental strand, 16730499 - 16730316
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    |||| |||||| |||| |||||| ||| || |||||||||||||||| |||||||||| | ||||| || |||||||||||||| | |||||||||| ||    
T  16730499 ggcatgtgtactaaatcgcttacgaagaaagaaagtgataagtagagtatcgtatccaaaaggattttcgtttcgtccaaacaactcgcgttacttattt 16730400  T
Q  131 ttgtaag-ttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttg 216  Q
    ||||||| ||||| ||   ||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||||    
T  16730399 ttgtaagtttgacaat---ataaaagttaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtttacctgtttttg 16730316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 34 - 254
Target Start/End: Complemental strand, 19492798 - 19492590
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tttt 132  Q
    |||||||||||||| | |||||||||||||||| ||||||||||| |||||||||| | | |||||| |||| ||||||||||| |||||||||| ||||    
T  19492798 caagtgtaccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttattttt 19492699  T
Q  133 gtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaag 232  Q
    ||| |||||| |||||| |          |||||   |||| ||| ||||| ||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  19492698 gtaggttgacaatataaaa----------gttag---gttgcaatatttatttgtttgcaacacagcaagtttacatgtttttggttgcagaaaagtaag 19492612  T
Q  233 cagcggttagaattcttcgaat 254  Q
    | |||||||| |||||||||||    
T  19492611 cggcggttaggattcttcgaat 19492590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 25 - 231
Target Start/End: Complemental strand, 20829845 - 20829640
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||| | ||| || ||||||| | |||||||  |||||| |||| ||||||| |||    
T  20829845 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataact-gagtattgtatccacaaggattgttgtttcgttcaaaaaatttgcatta 20829747  T
Q  125 cttattttgtaagtt-gacgatataat-aaaagataagggtt-agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    |||||||  |||||| ||||||| ||| |||||||||||||| ||||| ||  ||||||||||||||||| ||| | |||| ||||||||||||||||||    
T  20829746 cttattt--taagttcgacgataaaataaaaagataagggttaagagatttacaatttttatctgtttgcgacatagcaag-ttacttgtttttggttgc 20829650  T
Q  222 agaaaagtaa 231  Q
    ||||| ||||    
T  20829649 agaaatgtaa 20829640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 51 - 254
Target Start/End: Complemental strand, 24639535 - 24639339
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacgatataat 150  Q
    |||||||||||||||||||||||||||| |||||||||| | ||||| || ||| ||||||||||||||  | |||| |      |||||||||||||||    
T  24639535 ttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgttttgtccaaacaatttg--taactttt------agttgacgatataat 24639444  T
Q  151 aaaagat--aagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattct 248  Q
    |||| |   |||||||||||| ||| |||||| || ||||||||||||| ||||||||| |||||| |||||||||||||||||||| |||||| |||||    
T  24639443 aaaatagtaaagggttagagatttgtaatttt-atttgtttgcaacagagcaagtttacctgttttcggttgcagaaaagtaagcagtggttaggattct 24639345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 11490524 - 11490694
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||| |||||||||| | |||||||  |||| ||||||||||| ||||||    
T  11490524 cggattaggaaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttccaaacaattcgcgtta 11490623  T
Q  125 cttattttgtaagttgacgatat--aataaaaga-taagggttagagagttgaaatttttatctgtttgcaaca 195  Q
    |||||||  ||  ||||||||||  ||||||||| | || |||||||| ||| ||||||||||||||| |||||    
T  11490624 cttattt--tagtttgacgatataaaataaaagagttagtgttagaga-ttgcaatttttatctgttttcaaca 11490694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 27 - 254
Target Start/End: Complemental strand, 13692774 - 13692559
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||| |||||| | |||||||| ||||| |||||||||| | ||||||    
T  13692774 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgaccaaacaattcgtgttact 13692675  T
Q  127 ta-ttttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaa 225  Q
    || ||||||| ||||| | |   |||||| |||           |||| |||||||||  ||||| || ||| ||||||||| |||||||||||||||||    
T  13692674 tatttttgtaggttgaaggt---ataaaatata----------ggttgcaatttttattagtttgtaaaagagcaagtttacctgtttttggttgcagaa 13692588  T
Q  226 aagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||  ||||| |||||||||||    
T  13692587 aagtaagcagtagttaggattcttcgaat 13692559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 242
Target Start/End: Original strand, 19092289 - 19092503
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||| |||| |||| || || | |||||||| |||||||||||||| |  |||| ||    
T  19092289 gattaggcaagtgtaccaaattgtttatcaagtaataaagtgataagaagagtatcgcattcacatggattgtcgtttcgtccaaacaactcacgttgct 19092388  T
Q  127 tattttgtaagttgacgatat--aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||  ||||||||||||||  ||||||  ||||||| |||||||| ||| ||||||||||||||| |||||||  ||  |||| || |||||||| ||    
T  19092389 tattt--taagttgacgatattaaataaaagagataagagttagaga-ttgcaatttttatctgtttacaacagagtaa-attacctg-ttttggttaca 19092483  T
Q  223 gaaaagtaagcagcggttag 242  Q
    |||||||||  |||||||||    
T  19092484 gaaaagtaaatagcggttag 19092503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 249
Target Start/End: Original strand, 40227770 - 40227992
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||  | | | ||||||||| | |||||  |||| ||||||||||| |||||||    
T  40227770 ggattaggcaagtgtaccaaatcg-ttaccaagtaataaagtgataagttaatatt-gtatccataggaattgtagtttcatccaaacaattcgcgttac 40227867  T
Q  126 ttattttgtaagttgacgatataataaaagat--aagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    ||||||| ||  |||||||||  ||||||||   ||||| |||||  ||  |||||||||||||||||||| ||  |||||||| | ||||| ||||| |    
T  40227868 ttatttt-tagtttgacgataatataaaagagtaaagggctagaggtttacaatttttatctgtttgcaacggagtaagtttacctattttttgttgccg 40227966  T
Q  224 aaaagtaagcagcggttagaattctt 249  Q
    |||| |||||||||||||| ||||||    
T  40227967 aaaaataagcagcggttaggattctt 40227992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 240
Target Start/End: Complemental strand, 17951403 - 17951189
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| |||||||||||||| | |||||||||| |||||||||||||| || |||||||||||  |  ||||| ||||||| ||  |  | ||||||    
T  17951403 cggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatccattggatttgtcgtttcgtctaactagctcgcgtta 17951304  T
Q  125 cttattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  ||||||||||||||  |||||||||   | |||||||||| ||| ||||||||||||||||||||||| |||| |||| ||  ||||||||    
T  17951303 cttattt--taagttgacgatataaaataaaagagtgacgggttagaga-ttgcaatttttatctgtttgcaacagagcaag-ttacctg-atttggttg 17951209  T
Q  221 cagaaaagtaagcagcggtt 240  Q
    |||||||| |||||||||||    
T  17951208 cagaaaagcaagcagcggtt 17951189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 204
Target Start/End: Original strand, 5679200 - 5679377
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    ||||| |||||||||||||| | |||||||||||||||||||| ||||||| |||||||| | | | | | |  |||||||||||||||| |||||||||    
T  5679200 attagacaagtgtaccaaatcgtttaccaagtaataaagtgattagtagagtatcgtatctacatgaacttttgtttcgtccaaacaattcgcgttactt 5679299  T
Q  128 attttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtt 204  Q
    ||||  |||||| |||||||  |||||||||  ||||||||||| | ||| |||||||||||||||| |||||| ||||||    
T  5679300 attt--taagttaacgatataaaataaaagagttaagggttagaca-ttgcaatttttatctgtttgtaacagagcaagtt 5679377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 17955255 - 17955044
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| |||||||||||||| | |||||||||| |||||||||||||| || |||||||||||  |  ||||| ||||||| ||  |  | ||||||    
T  17955255 cggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatccattggatttgtcgtttcgtctaactagctcgcgtta 17955156  T
Q  125 cttattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  ||||||||||||||  |||||||||   | |||||||||| ||| ||||||||||||||||||||||| |||| |||| ||  ||||||||    
T  17955155 cttattt--taagttgacgatataaaataaaagagtgatgggttagaga-ttgcaatttttatctgtttgcaacagagcaag-ttacctg-atttggttg 17955061  T
Q  221 cagaaaagtaagcagcg 237  Q
    |||||||| ||||||||    
T  17955060 cagaaaagcaagcagcg 17955044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 19882632 - 19882738
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||||||||| |||| | ||| |||||||||||||||| ||||||| |||||||| | | |||||||| |||||||||||||||| ||||||    
T  19882632 cggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaattcgcgtta 19882731  T
Q  125 cttattt 131  Q
    |||||||    
T  19882732 cttattt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 20315000 - 20315098
Alignment:
Q  33 gcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||  ||| |||||| | |||||||| ||||||||||||||||||||||||||||||    
T  20315000 gcaagtgtaccaaatcgtttaccaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 30 - 228
Target Start/End: Complemental strand, 19929777 - 19929579
Alignment:
Q  30 taggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttat 129  Q
    ||||||||||||||||||   ||||||||||| |||||||||| ||||| |||||||||| | |||||||| ||||||| ||| |    | |||||||||    
T  19929777 taggcaagtgtaccaaatcatttaccaagtaacaaagtgataaatagagtatcgtatccacatggattgtcgtttcgtctaaatagcccgtgttacttat 19929678  T
Q  130 tttgtaagttgacgatat--aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaa 225  Q
    ||  ||||||||| ||||  ||||||  |||||||||||| ||| ||  ||||||||||||||||||||||| |||  |||| |||||||||||||||||    
T  19929677 tt--taagttgacaatataaaataaaagagataagggttaaaga-tttcaatttttatctgtttgcaacagagcaa-attacatgtttttggttgcagaa 19929582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 21323982 - 21323875
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||||||||| |||| | ||||||| |||||| ||||| ||||||| |||||||||| |  ||||||| |||||||||||||||| ||||||    
T  21323982 cggattaggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattcgcgtta 21323883  T
Q  125 cttatttt 132  Q
    ||||||||    
T  21323882 cttatttt 21323875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 13992984 - 13992879
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||| ||| ||||||||||||||| |||||||||||||||||| ||||||||| |||||||||| | ||||| || ||| |||||||||||| | |||    
T  13992984 gcggatgaggtaagtgtaccaaattgtttaccaagtaataaagtggtaagtagagtatcgtatccacatggattttcgttttgtccaaacaattcgtgtt 13992885  T
Q  124 acttat 129  Q
    ||||||    
T  13992884 acttat 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 22176064 - 22175904
Alignment:
Q  30 taggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttat 129  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||| || |||||||||  ||||||| |||  ||||||||||| ||| || ||||    
T  22176064 taggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtattgtatccatagagattgtcattttctccaaacaattcgcg-taattat 22175966  T
Q  130 tttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttg 190  Q
    ||||  |||||| |||||  |||||||||  ||||||||||||| ||| ||||||||| ||||||    
T  22175965 tttg--agttgatgatataaaataaaagagttaagggttagaga-ttgcaatttttatttgtttg 22175904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 204
Target Start/End: Complemental strand, 8969825 - 8969655
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    ||||| |||||||||||||||  |||| ||||||||||||| ||||||||| | |||||| |    ||||||| |||||||||||||||| | |||||||    
T  8969825 attagacaagtgtaccaaattatttacaaagtaataaagtg-taagtagagcaacgtatctactgagattgtcgtttcgtccaaacaattcgtgttactt 8969727  T
Q  128 attttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtt 204  Q
    |||||||   ||||||||||||||||   ||||||||||||| ||| ||||| ||||| | ||||||||| ||||||    
T  8969726 attttgt--tttgacgatataataaa--ttaagggttagaga-ttgcaatttatatctatatgcaacagagcaagtt 8969655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 17026308 - 17026222
Alignment:
Q  168 gagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||| | |||||||||||||||||||||  || ||||| |||||||||||||||| ||||||||||||||||| |||||||||||    
T  17026308 gagttgcagtttttatctgtttgcaacagagtaaatttacctgtttttggttgcagacaagtaagcagcggttaggattcttcgaat 17026222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 25121332 - 25121227
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||| |||||| |||||| | |||||||||||||||||| |||||| || |||||||||| | |||||||  |||||||||||||||| ||||||    
T  25121332 cggattaggaaagtgttccaaatcgtttaccaagtaataaagtg-taagtatagtatcgtatccacaaggattgtggtttcgtccaaacaattcgcgtta 25121234  T
Q  125 cttattt 131  Q
    |||||||    
T  25121233 cttattt 25121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 9737616 - 9737512
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgat-----aagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttg 119  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||     |||||||| |||||||||| | |||||||  ||||||| ||||||||||    
T  9737616 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagtaaagtagagtatcgtatccacatggattgtagtttcgtctaaacaatttg 9737517  T
Q  120 cgtta 124  Q
    |||||    
T  9737516 cgtta 9737512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 22357640 - 22357430
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagag---aatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    ||||||| |||||||| ||||   ||||||||||||||||||||||||| ||    |||||||||| | |||||||| |||| |  ||||| || | |||    
T  22357640 gattaggtaagtgtactaaatcatttaccaagtaataaagtgataagtaaagtactatcgtatccacatggattgtcgtttcatttaaacagttcgtgtt 22357541  T
Q  124 acttattttgtaagttgacgatat----aataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggtt 219  Q
    ||||||||   |||||||||||||    ||||| ||||||| |||||||| ||| ||||||||| ||||||||| | | |||| ||||||||||||| ||    
T  22357540 acttattt--aaagttgacgatataaaaaataagagataagagttagaga-ttgcaatttttatttgtttgcaatatagcaag-ttacttgtttttgatt 22357445  T
Q  220 gcagaaaagtaagca 234  Q
    ||||||||| |||||    
T  22357444 gcagaaaaggaagca 22357430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 11700675 - 11700571
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||| ||||| |||||||||| |  ||||||| ||||||  |||||||||| |||||    
T  11700675 ggattagacaagtgtaccaaattgtttaccaagtaataaaatgataaatagagtatcgtatccaca-agattgtcttttcgtttaaacaatttgtgttac 11700577  T
Q  126 ttattt 131  Q
     |||||    
T  11700576 ctattt 11700571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 237
Target Start/End: Complemental strand, 19636682 - 19636483
Alignment:
Q  35 aagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgt 134  Q
    ||||||||||||| | |||| ||||||||||||| ||||||||| || ||||| ||| |||||||| |||| |||||||||||   |||||||||||  |    
T  19636682 aagtgtaccaaatcg-ttacaaagtaataaagtggtaagtagagtattgtatctatagggattgtcgtttcatccaaacaattcatgttacttattt--t 19636586  T
Q  135 aag-ttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaa 231  Q
    ||| ||||||||| |||||||||  ||||||||||||| |    |||||||| |||||| | |||| |||| |||||   |||| |||| ||||||||||    
T  19636585 aagtttgacgataaaataaaagagttaagggttagagattcactatttttatatgtttgtagcagagcaag-ttact--atttttgttgtagaaaagtaa 19636489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 15047121 - 15047219
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| |||||| |||||| | |||||||||||||||||||||||||||| |||||||| | | ||||| || ||||||| |||||| ||| ||||    
T  15047121 ggattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtctaaacaacttgtgtta 15047219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 15107303 - 15107205
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| |||||| |||||| | |||||||||||||||||||||||||||| |||||||| | | ||||| || ||||||| |||||| ||| ||||    
T  15107303 ggattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtctaaacaacttgtgtta 15107205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 25097957 - 25098042
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| |||||||||||||| |||||| | ||| ||||| ||||||||||||  |||||||| ||||||||||| |||||||||||    
T  25097957 agttgcaatttttatctgttggcaacaaagcaaatttacctgtttttggttgttgaaaagtatgcagcggttaggattcttcgaat 25098042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 11933414 - 11933517
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    ||||||||||||| || ||| | |||||||||||| ||||||||||| ||| |||||  ||| | |||||||| |||||||||||||| | |||||||||    
T  11933414 attaggcaagtgttcctaatcgtttaccaagtaatgaagtgataagt-gagtatcgtgaccacatggattgtcgtttcgtccaaacaactcgcgttactt 11933512  T
Q  128 atttt 132  Q
    |||||    
T  11933513 atttt 11933517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 250
Target Start/End: Complemental strand, 26116001 - 26115788
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg 133  Q
    |||||||||||||| | ||| |||||||||| ||| ||| || || |||||||||||| ||||||||  ||| ||||||||||| |  |||||||||||     
T  26116001 caagtgtaccaaatcgtttatcaagtaataacgtg-taattaaagtatcgtatccataaggattgtcgattcttccaaacaattcgttttacttatttta 26115903  T
Q  134 taagttgacgatataataaaagataagggtt-agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaag 232  Q
     ||    |  |||||| || || | |||||| ||||| ||| |||||||||||||||||||||||  ||| |||| || ||||||||||| ||| || ||    
T  26115902 aaataaaataatataa-aagagtttagggttaagagatttgcaatttttatctgtttgcaacagagtaag-ttacctg-ttttggttgcataaatgttag 26115806  T
Q  233 cagcggttagaattcttc 250  Q
    |||||||||| |||||||    
T  26115805 cagcggttaggattcttc 26115788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 9052666 - 9052773
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||||||||||||||   ||||||||||||||| || ||||||||| |||||||||  |  ||||||  ||||  ||||||||||  |||||    
T  9052666 cggattaggcaagtgtaccaaatcatttaccaagtaataaaatg-taagtagagtatcgtatccgcaaagattgttgtttcaaccaaacaattcacgtta 9052764  T
Q  125 cttattttg 133  Q
    |||||||||    
T  9052765 cttattttg 9052773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 254
Target Start/End: Complemental strand, 13992079 - 13991968
Alignment:
Q  132 tgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaa 231  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||||||          |||| |||||||||||||| |||| |||  ||||||||||    
T  13992079 tgtaagttgacgatataagaaaagataaggtttagagagttgcaattttt----------aacataacaagtttacttg-ttttagttatagaaaagtaa 13991991  T
Q  232 gcagcggttagaattcttcgaat 254  Q
    ||| | ||||| |||||||||||    
T  13991990 gcatcagttagtattcttcgaat 13991968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 25121182 - 25121105
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||||||||||||| |||||| ||  ||||| | ||||||||||||||||||||||||| |||||||||||    
T  25121182 aatttctatctgtttgcaacagagcaagtt-acccgtttt-gattgcagaaaagtaagcagcggttaggattcttcgaat 25121105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 12318425 - 12318478
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagag 78  Q
    |||||||||||||||||||||||   | ||||||||||||||||||||||||||    
T  12318425 cggattaggcaagtgtaccaaatcattaaccaagtaataaagtgataagtagag 12318478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 254
Target Start/End: Complemental strand, 12406650 - 12406581
Alignment:
Q  185 tgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||| ||| | | ||||| ||||||||||||||| ||||||| |||||||||| |||||||||||    
T  12406650 tgtttgcaatagagcgaatttacctgtttttggttgcaggaaagtaaacagcggttaggattcttcgaat 12406581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 19900576 - 19900624
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagag 78  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  19900576 ttaggcaagtgtaccaaattgtttaccaagtaataaagtg-taagtagag 19900624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 22526369 - 22526462
Alignment:
Q  38 tgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    |||||||||| | ||| ||| |||||||||||||||||||| |||||||||| | | |||||| ||||  |||||| || || |||||||||||    
T  22526369 tgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatccacatgaattgtcgtttcaaccaaaccatctgtgttacttattt 22526462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 23080334 - 23080439
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    |||||||  |||||||| ||||   ||||||| |||||| ||||||||||||  || |||| || | |||||||| ||||  ||||||||||||||||||    
T  23080334 ggattagataagtgtactaaataatttaccaaataataaggtgataagtagaatattgtattcacatggattgtcgtttcaaccaaacaatttgcgttac 23080433  T
Q  126 ttattt 131  Q
    ||||||    
T  23080434 ttattt 23080439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 3774817 - 3774923
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggat--tgtcctttcgtccaaacaatttgcgt 122  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||  |||||||| ||| |||||| | | ||  |||| |||| |||||||||||  |||    
T  3774817 cggattaggcaagtgtatcaaattgtttactaagtaataaagtg-caagtagagtatcatatccacatgaattgtgtcgtttcatccaaacaattcacgt 3774915  T
Q  123 tacttatt 130  Q
    ||||||||    
T  3774916 tacttatt 3774923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 11521288 - 11521192
Alignment:
Q  35 aagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    ||||||||||||| | ||| ||| |||||||||||||||||||| ||||||| || | |||||||| |||| || |||| |||  | ||||||||||    
T  11521288 aagtgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatacacatggattgtcgtttcttctaaactattcacattacttattt 11521192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 19374909 - 19374827
Alignment:
Q  35 aagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaattt 118  Q
    ||||||||||||| | ||| ||||||||||| || ||||||||| ||||||||||    ||||||| ||| |||||||||||||    
T  19374909 aagtgtaccaaatcgtttatcaagtaataaaatg-taagtagagtatcgtatccactgagattgtcgttttgtccaaacaattt 19374827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 25094589 - 25094652
Alignment:
Q  55 caagtaataaagtga-taagtagagaatcgtatccatacggattgtcctttcgtccaaacaatt 117  Q
    ||||||||||||| | ||||||||| ||| |||||| | ||||||| |||||||||||||||||    
T  25094589 caagtaataaagttagtaagtagagtatcatatccacatggattgttctttcgtccaaacaatt 25094652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 22218703 - 22218642
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccata 91  Q
    ||||| || ||||| |||||| ||| |||||||||||||| ||||||||| ||||||||||||    
T  22218703 ttaggtaactgtacaaaattgtttatcaagtaataaagtg-taagtagagtatcgtatccata 22218642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 11935237 - 11935278
Alignment:
Q  213 tttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||| ||| |||||| |||||||||||    
T  11935237 tttggttgcagaaaagtaatcagtggttaggattcttcgaat 11935278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 25094690 - 25094775
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||||||||||||||||| | | | ||||| |  |||||| || ||||||  ||||||||||||| |||||| ||||    
T  25094690 agttgcaatttttatctgtttgcaacaaagcgaatttacctagttttggatgtagaaaatcaagcagcggttaggattcttagaat 25094775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 1833696 - 1833648
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtaga 77  Q
    ||||||||||  | ||||| | |||||||||||||||||||||||||||    
T  1833696 ttaggcaagtacatcaaatcgtttaccaagtaataaagtgataagtaga 1833648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 5e-68; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 24 - 254
Target Start/End: Original strand, 17359153 - 17359382
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||| ||||||||  ||||||| ||||||||||| ||||  ||||    
T  17359153 gcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagttgagtatcatatccataaagattgtcgtttcgtccaaataattctcgtt 17359252  T
Q  124 acttattttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||| | ||| ||||| ||||||||||||||     
T  17359253 acttatttt-taggttgacgatataataaaagataagggttagagagttgcaatttttatctgctggcaacatagcaaatttacctgtttttggttgcat 17359351  T
Q  224 aaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||  |||||||| |||||||||||    
T  17359352 aaaagtaagatgcggttaggattcttcgaat 17359382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 34 - 249
Target Start/End: Complemental strand, 17610354 - 17610139
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tttt 132  Q
    |||||||||||||| | ||||||||||||||||| |||||||||| |||||||||| | |||||||| ||||||||||||||||  ||||||||| ||||    
T  17610354 caagtgtaccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaattcacgttacttattttt 17610255  T
Q  133 gtaag-ttgacgatataataaaagataagggttagagag-ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagta 230  Q
    ||||| ||||||||   ||||||| ||| ||||||| || ||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  17610254 gtaagtttgacgat---ataaaagttaaaggttagaaagcttgtaatttttatatgtttgcaacagagcaagtttacctgtttttggttgcagaaaagta 17610158  T
Q  231 agcagcggttagaattctt 249  Q
    |||||||||||| ||||||    
T  17610157 agcagcggttaggattctt 17610139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 26 - 254
Target Start/End: Original strand, 9401502 - 9401726
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    |||||||||| ||||||||||| | |||||| ||||||||||   |||||||| |||||||||| | | |||||| |||||||||||||||| |||||||    
T  9401502 ggattaggca-gtgtaccaaatagtttaccaggtaataaagt---aagtagagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttac 9401597  T
Q  126 ttatttt-gtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcaga 224  Q
    ||||||| ||||||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||  |||||||| || |||||||| || |    
T  9401598 ttatttttgtaagttgttgatataataaaagataacggttagagagttgcaatttttatctgtttgcaacagagtaagtttacctg-ttttggttacaaa 9401696  T
Q  225 aaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||| ||||||||| |||||||||||    
T  9401697 aaagtaagtagcggttaggattcttcgaat 9401726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 35 - 254
Target Start/End: Complemental strand, 31236145 - 31235927
Alignment:
Q  35 aagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgt 134  Q
    ||||||||| ||| | |||| |||||||||||||||||| |||| ||  |||| | |  ||||||| ||| ||||||| |||| |||||||||||||| |    
T  31236145 aagtgtaccgaatcgtttactaagtaataaagtgataagcagagtattatatctacaaagattgtcgttttgtccaaataattcgcgttacttatttt-t 31236047  T
Q  135 aagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagca 234  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||    
T  31236046 aagttgacgatataataaaatataagggttagagagttgcaatttttatctctttgcaacagagcaagtttacttgtttttggttgcataaaagtaagca 31235947  T
Q  235 gcggttagaattcttcgaat 254  Q
     ||||||  |||||| ||||    
T  31235946 acggttaagattctttgaat 31235927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 32 - 247
Target Start/End: Complemental strand, 25405730 - 25405516
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    |||||||||||||| | | ||||||||||||||||||||||||| || |||||||||| | |||||||| ||||||||||||| ||  ||||||||||||    
T  25405730 ggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaacagttcacgttacttattt 25405631  T
Q  132 t-gtaagttgacgatataataaaagataagggttagagag-ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagt 229  Q
    | |||||||||||||||||  ||   ||||||||||| || ||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||    
T  25405630 ttgtaagttgacgatataa--aagtttaagggttagaaagcttgcaatttttatttgtttgcaacagagcaagtttacttgtttttggttgcag-aaagt 25405534  T
Q  230 aagcagcggttagaattc 247  Q
    ||||||||||||| ||||    
T  25405533 aagcagcggttaggattc 25405516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 15544066 - 15543845
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||     |||||| |||||||||||||||| | |||||||||||    
T  15544066 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttattt 15543967  T
Q  132 tgt-aagttgacgatataataaaagataagggttaga-gagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagt 229  Q
    | | || ||||||||||||   ||||||||||||| | |||||| ||||||||| ||||||||||| |  |||||||| ||||||| |||||||||||||    
T  15543966 ttttaatttgacgatataa---aagataagggttaaaagagttgcaatttttatttgtttgcaacatagtaagtttacctgttttttgttgcagaaaagt 15543870  T
Q  230 aagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||| |||||||||||    
T  15543869 aagcaacggttaggattcttcgaat 15543845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 254
Target Start/End: Original strand, 12208600 - 12208822
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||  ||| |||||| | |||||||| |||||||||||||||| |||||||||||||    
T  12208600 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaattcgcgttacttattt 12208699  T
Q  132 t-gtaagttgacgatataataaaagataagggttagagag-ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagt 229  Q
    | ||||||||||||||||| || | | |||||||||| || ||  | |||| |||||||||||||||| ||||||||| |||||| | | ||||||||||    
T  12208700 ttgtaagttgacgatataa-aagataaaagggttagaaaggtttcagttttaatctgtttgcaacagagcaagtttacctgttttagct-gcagaaaagt 12208797  T
Q  230 aagcagcggttagaattcttcgaat 254  Q
    ||||||||||||| |||||||||||    
T  12208798 aagcagcggttaggattcttcgaat 12208822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 36 - 247
Target Start/End: Original strand, 16179010 - 16179220
Alignment:
Q  36 agtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt-gt 134  Q
    |||||||||||| | ||| ||||||||||| |||||||||||| |||||||||| | |||  ||| ||||||||||||||||   |||||||||||| ||    
T  16179010 agtgtaccaaatcgtttaacaagtaataaactgataagtagagtatcgtatccaaaaggaaagtcgtttcgtccaaacaattcttgttacttatttttgt 16179109  T
Q  135 aagttgacgatataataaaagataagggttaga-gagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagc 233  Q
    |||||||||||||||   || |||||||||||| |  ||| |||||||||||| |||||||||| ||||||||| | |||||||||||||||||||||||    
T  16179110 aagttgacgatataa---aatataagggttagatgtcttgcaatttttatctgattgcaacagagcaagtttacctatttttggttgcagaaaagtaagc 16179206  T
Q  234 agcggttagaattc 247  Q
    ||||||||| ||||    
T  16179207 agcggttaggattc 16179220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 53 - 254
Target Start/End: Complemental strand, 21666687 - 21666487
Alignment:
Q  53 accaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg-taagttgacgatataata 151  Q
    |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||      
T  21666687 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccaaacaattctcgttacttatttttataagttgacgatataa-- 21666590  T
Q  152 aaagataagggttagagag--ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattctt 249  Q
     ||||||||||||| | ||  | | ||||||||||||||||||| | ||||||||||| || ||||||||| |||||||||||||  |||||| ||||||    
T  21666589 -aagataagggttaaaaagactagtaatttttatctgtttgcaagacaacaagtttacctg-ttttggttgtagaaaagtaagcaatggttaggattctt 21666492  T
Q  250 cgaat 254  Q
    |||||    
T  21666491 cgaat 21666487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 254
Target Start/End: Original strand, 21449080 - 21449298
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtt 123  Q
    |||||| ||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| | |||||||| ||||| |||||||||||  |||    
T  21449080 gcggatcaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcggccaaacaatttatgtt 21449179  T
Q  124 actta-ttttgtaag-ttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    ||||| ||||||||| |||||| |   ||||||||||  ||||          ||||||||||||||||||||| | ||||||||  ||||||||| |||    
T  21449180 acttatttttgtaagtttgacggt---ataaaagata--ggtt---------caatttttatctgtttgcaacatagcaagtttaactgtttttggatgc 21449265  T
Q  222 agaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||||| |||||||||||    
T  21449266 agaaaagtaagcagcggttaggattcttcgaat 21449298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 32 - 242
Target Start/End: Original strand, 29242518 - 29242715
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||  ||||||| |||| ||||||||||| ||||||| || ||    
T  29242518 ggcaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaattcgcgttacatattt 29242617  T
Q  131 ttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagta 230  Q
    ||||||||||||||||||| |          |||||   |||| ||||||||||||||||||||||| ||||||||| || ||||||||||| |||||||    
T  29242618 ttgtaagttgacgatataaaa----------gttag---gttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttggttgcaaaaaagta 29242703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 14779564 - 14779766
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    ||||||||||||||||   |||||||||||||| ||||||| ||||| ||| |||||| | |||||||| |||||||||||||  | |||||| ||| ||    
T  14779564 ggcaagtgtaccaaatcatttaccaagtaataatgtgataattagagtatcatatccacagggattgtcgtttcgtccaaacatatcgcgttatttattt 14779663  T
Q  131 ttgtaagttgacgatataataaaagataagggttag-agagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagt 229  Q
    ||||||||||||||||||| |||||| || |||||| || |||| ||||||||| ||||| ||||| | |||||||||||| ||||||||| ||||||||    
T  14779664 ttgtaagttgacgatataa-aaaagaaaaaggttagaagggttgcaatttttatttgtttacaacatatcaagtttacttg-ttttggttgaagaaaagt 14779761  T
Q  230 aagca 234  Q
    |||||    
T  14779762 aagca 14779766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 242
Target Start/End: Original strand, 22664201 - 22664415
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||| ||||||   ||||| || ||||||| |||||| | ||||| |||    
T  22664201 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatccactgggattttcatttcgtctaaacaactcgcgttgctt 22664300  T
Q  128 attttgtaagttgacgatat--aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    ||||  ||||||||||||||  ||||||  |||||||||||||  | ||| ||||||||| |||||| |||||| |||| |||| || ||||||||||||    
T  22664301 attt--taagttgacgatataaaataaaagagataagggttagtaaattgcaatttttatttgtttgtaacagagcaag-ttacatg-ttttggttgcag 22664396  T
Q  224 aaaagtaagcagcggttag 242  Q
    ||||||||| |||||||||    
T  22664397 aaaagtaagtagcggttag 22664415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 18736340 - 18736130
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    |||||||||||||||| | ||| |||||||||||||||||||||| | |||||||||| | |||||||| |||||| |||||||||| ||||||||| ||    
T  18736340 ggcaagtgtaccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagggattgtcgtttcgttcaaacaatttccgttacttattt 18736241  T
Q  131 ttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagta 230  Q
    ||||| ||||||| ||||| |           ||||   |||| || |||||||||||||||| ||| ||||||||| | ||||||||||||||||||||    
T  18736240 ttgtaggttgacggtataaaa----------tttag---gttgcaaattttatctgtttgcaatagagcaagtttacctatttttggttgcagaaaagta 18736154  T
Q  231 agcagcggttagaattcttcgaat 254  Q
     |||||||| || |||||||||||    
T  18736153 ggcagcggtaaggattcttcgaat 18736130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 254
Target Start/End: Complemental strand, 13345442 - 13345216
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| | |||||||| ||| |||||||||||| |||||||    
T  13345442 ggattgggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 13345343  T
Q  126 ttattttgtaagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    ||| ||| ||  ||||||||| |||||||||  ||| ||||| ||| ||| | ||||||||| |||  |||| | ||   |||| || ||||||||  ||    
T  13345342 tta-tttatagtttgacgataaaataaaagagttaaaggttaaagatttgcagtttttatctatttaaaacatagca--gttacctg-ttttggtttaag 13345247  T
Q  224 aaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||| |||||||||| ||| |||||||    
T  13345246 aaaagtaaacagcggttaggatttttcgaat 13345216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 254
Target Start/End: Complemental strand, 9787986 - 9787757
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||||||||||||||   ||| |||||||||||||||||||||||| ||||||||||||   |||||| ||||||| |||||| |    |||    
T  9787986 cggattaggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtatccatataaattgtcgtttcgtctaaacaactccaatta 9787887  T
Q  125 cttattttgtaagttgacgatata----ataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  |||||| | ||||||    | || ||| |||||||||||| ||| |||||| | |||||||||||||| |||| | || ||||||||||||    
T  9787886 cttattt--taagtttatgatataaaatagaagagaaaagggttagaga-ttgcaattttgaactgtttgcaacagagcaag-tgacctgtttttggttg 9787791  T
Q  221 cagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||  |||||||||| |||| ||||    
T  9787790 cagaaaagtaagttgcggttagaactctttgaat 9787757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 254
Target Start/End: Complemental strand, 23038117 - 23037889
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| ||| |||||||||| | |||||||| ||||||| |||||| |  ||||||    
T  23038117 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt-gagtatcgtatccacatggattgtcgtttcgtcaaaacaactctcgttac 23038019  T
Q  126 ttattttgtaag-ttgacgatataataaa--agataagggtt-agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    ||||||  |||| |||| |||| ||||||  |||||| |||| ||| | ||  ||||||| ||||||||||||| | |||| ||||||||||||||||||    
T  23038018 ttattt--taagtttgatgataaaataaaagagataatggttgaga-aattacaatttttttctgtttgcaacatagcaag-ttacttgtttttggttgc 23037923  T
Q  222 agaaaagtaagcagcggttaga--attcttcgaat 254  Q
    ||||| |||| ||| |||||||  |||||||||||    
T  23037922 agaaatgtaa-cagtggttagaggattcttcgaat 23037889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 229
Target Start/End: Complemental strand, 51473978 - 51473780
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||||| || |||||||||| | |||||  ||||||||||||||||||||| |||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  51473978 attaggaaaatgtaccaaatcgtttacc--gtaataaagtgataagtagagtatcgtatccatatggattgtcgttttgtccaaacaatttgcgttactt 51473881  T
Q  128 attttgtaagttgacgatataataaaaga---taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcaga 224  Q
     |||  | ||| ||| ||| |||||||||    || ||||||||| ||| ||||||||||||||||||||| | ||||||  ||   |||||||||||||    
T  51473880 gttt--ttagtcgacaataaaataaaagagttaaaaggttagagatttgcaatttttatctgtttgcaacatatcaagttatct--attttggttgcaga 51473785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 17837509 - 17837615
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||| | |||||||| ||| ||| |||||||| ||||||    
T  17837509 cggattaggcaagtgtaccaaattgtttaccaagtaataaagttataagtagagtatcatatccacaaggattgtcattttgtctaaacaattcgcgtta 17837608  T
Q  125 cttattt 131  Q
    |||||||    
T  17837609 cttattt 17837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 21988082 - 21987872
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    ||||||||||||||||   ||||||| |||||||||||||||||||| |||||||||     ||||||| |||||||||| ||||| |||||||||| ||    
T  21988082 ggcaagtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatcctcggagattgtcatttcgtccaatcaattcgcgttacttattt 21987983  T
Q  131 ttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagta 230  Q
    ||||||| ||||| ||||| |          |||||   |||| ||||||||| ||||||||||||| ||| ||||| |||||||||||||| |||||||    
T  21987982 ttgtaagctgacggtataaaa----------gttag---gttgcaatttttatatgtttgcaacagagcaactttacctgtttttggttgcataaaagta 21987896  T
Q  231 agcagcggttagaattcttcgaat 254  Q
    ||||||||| || |||||| ||||    
T  21987895 agcagcggtaaggattctttgaat 21987872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 242
Target Start/End: Original strand, 24281272 - 24281484
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||||||  ||| |||||| | ||||| || |||  ||| |||||||||||||||||    
T  24281272 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagattatcatatccacatggattatcgttttttccgaacaatttgcgttactt 24281371  T
Q  128 attttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcag 223  Q
    ||||  ||||||||| ||||  |||||||||   |||||||||||| ||| ||||| |||||||||| ||||||  ||| |||| ||  |||||||| ||    
T  24281372 attt--taagttgacaatataaaataaaagagtaaagggttagaga-ttgcaatttctatctgtttgaaacagagaaag-ttacatg--tttggttgtag 24281465  T
Q  224 aaaagtaagcagcggttag 242  Q
    ||||||| ||||| |||||    
T  24281466 aaaagtatgcagcagttag 24281484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 254
Target Start/End: Complemental strand, 15813261 - 15813033
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||||| | ||| || ||||||||||||||||| ||  |||||||||| | ||||| || || ||||||||||| |  |||||    
T  15813261 cggattaggcaagtgtaccaaatcgtttatcatgtaataaagtgataagt-gactatcgtatccacaaggattttcgttgcgtccaaacaactctcgtta 15813163  T
Q  125 cttattttgtaagttgacgatataataaa-agataagggtt-agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||||  ||| ||||||||| |||||| ||||||||||| ||||  ||| ||||||||| ||||| ||||| | |||| |||| ||| |||| |||||    
T  15813162 cttattt--taatttgacgataaaataaagagataagggttaagaggtttgcaatttttatatgtttccaacatagcaag-ttacctgtctttgcttgca 15813066  T
Q  223 gaaaagtaagcagcggttaga--attcttcgaat 254  Q
     |||||||| ||||||| |||  |||||||||||    
T  15813065 aaaaagtaa-cagcggtcagatgattcttcgaat 15813033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 254
Target Start/End: Complemental strand, 16917011 - 16916824
Alignment:
Q  55 caagtaataaagtga-taagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg-taagttgacgatataataa 152  Q
    ||||||||||||| | ||||||||| |||||||||| | ||||||||||||||||| |||||||  |||||||||||||  || ||||||| ||||| |     
T  16917011 caagtaataaagttagtaagtagagtatcgtatccacagggattgtcctttcgtccgaacaattctcgttacttatttttataggttgacggtataaaa- 16916913  T
Q  153 aagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcga 252  Q
             |||||    ||| ||||||||||| ||||||||||| | | ||||| |||||||||||||||||||||||||||||| ||| |||||||||    
T  16916912 ---------gttag----ttgcaatttttatctctttgcaacagagcgaatttacctgtttttggttgcagaaaagtaagcagcgggtaggattcttcga 16916826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 22622910 - 22623107
Alignment:
Q  53 accaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta--ttttgtaagttgacgatataat 150  Q
    |||||||||||||||||| ||||||| ||| |||||  | |||||||||||||||||||| |||| ||||||||||  |||  |||||||| | |   ||    
T  22622910 accaagtaataaagtgattagtagagtatcatatcctaagggattgtcctttcgtccaaaaaattcgcgttacttaattttattaagttgatggt---at 22623006  T
Q  151 aaaagataagggtt--agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattct 248  Q
     |||| ||| ||||  | ||| |||  |||||||| | ||||||||||| ||||||||| || ||||||||||||||||||||||||| ||||| |||||    
T  22623007 taaagttaacggttaaaaagacttgccatttttatatatttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaagcagctgttaggattct 22623105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 249
Target Start/End: Original strand, 33190669 - 33190892
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| || ||||||||||| | ||| ||||||||||| |||||||||||| ||  |||||| |   |||||| |||| || |||||| | | ||||    
T  33190669 cggattagacaggtgtaccaaatcgtttatcaagtaataaaatgataagtagagtataatatccacaacaattgtcgtttcatctaaacaactcgtgtta 33190768  T
Q  125 cttattttgtaagttgacgatat--aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  ||||||||||||||  ||||||  || ||||| ||||||| ||| ||||||||| ||||||||||||  ||||||  || |  |||| |||    
T  33190769 cttattt--taagttgacgatataaaataaaatagttaaggtttagaga-ttgtaatttttatttgtttgcaacagtgcaagttacctgg--tttgattg 33190863  T
Q  221 cagaaaagtaagcagcggttagaattctt 249  Q
    |||||||||||||||||||||| ||||||    
T  33190864 cagaaaagtaagcagcggttaggattctt 33190892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 3591760 - 3591654
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||||||||| |||| | ||| |||||||||||||||||| ||||| |||||||||| |  ||||||| ||| |||||||||||| || |||    
T  3591760 cggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagagtatcgtatccacatagattgtcgttttgtccaaacaattcgcctta 3591661  T
Q  125 cttattt 131  Q
    |||||||    
T  3591660 cttattt 3591654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 21847629 - 21847729
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||||||||||||||||||| | |||||||||||||||||  ||||||||| || ||||||| | |||||||| ||||||||||||||||  ||||||||    
T  21847629 attaggcaagtgtaccaaatcgtttaccaagtaataaagt-ctaagtagagtattgtatccacatggattgtcgtttcgtccaaacaattcacgttactt 21847727  T
Q  128 at 129  Q
    ||    
T  21847728 at 21847729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 27117825 - 27117720
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||||||||| |||||||| | |||||||||||||||||||||||||||| || |||| || | | |||||| ||||  ||||||||| |||||||    
T  27117825 cggattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtattgtattcacatgaattgtcgtttcaaccaaacaatctgcgtta 27117726  T
Q  125 cttatt 130  Q
    ||||||    
T  27117725 cttatt 27117720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 254
Target Start/End: Complemental strand, 21334796 - 21334596
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaagttgacgatataataaa 153  Q
    ||||||||||||||||||||| || |||||||||  | | |||||| |||| |||||||||||  ||||||||| |||| ||||||||||||   |||||    
T  21334796 caagtaataaagtgataagtatagtatcgtatccggaggaattgtcatttcttccaaacaattctcgttacttatttttttaagttgacgat---ataaa 21334700  T
Q  154 agat-aagggttagagag---ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattctt 249  Q
    |||| || |||| || ||   |  || ||||||||||||||||| | | |||| |||| | |||||||||| |||||||||| |||||||||| ||||||    
T  21334699 agataaatggtttgaaagtcttacaattttttatctgtttgcaaaatagcaag-ttacctatttttggttgaagaaaagtaaacagcggttaggattctt 21334601  T
Q  250 cgaat 254  Q
    |||||    
T  21334600 cgaat 21334596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 204
Target Start/End: Original strand, 147625 - 147801
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    |||||| |||||||| ||||| | ||  |||||||||||||||||||| ||| ||| ||| || | |||||||| ||||||| |||||  | ||||||||    
T  147625 gattagacaagtgtatcaaatcgtttcacaagtaataaagtgataagtggagtatcatattcacatggattgtcatttcgtctaaacagctcgcgttact 147724  T
Q  127 tattttgtaagttgacgatat-aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtt 204  Q
    |||||  ||| |||||||||| ||||||  |||||||||||||||| || ||  |||||||| ||||||||||| ||||||    
T  147725 tattt--taatttgacgatataaataaaagagataagggttagagatttcaa--ttttatctatttgcaacagagcaagtt 147801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 16787833 - 16787726
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||| | | ||||| | ||| |||||||||||||||||||||||| ||||||| || |  ||||||| ||| | |||||||||||||||||    
T  16787833 cggattaggcaagggaatcaaatcgtttatcaagtaataaagtgataagtagagtatcgtattcacatagattgtcgttttgcccaaacaatttgcgtta 16787734  T
Q  125 cttatttt 132  Q
    ||||||||    
T  16787733 cttatttt 16787726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 22620255 - 22620361
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    |||||||||||||||| ||||||  |||  ||||||||||||||||| ||||| |||||||||||| | |||||| ||||||| ||| ||||  ||||||    
T  22620255 ggattaggcaagtgtatcaaattctttaaaaagtaataaagtgataactagagtatcgtatccataggaattgtcttttcgtctaaataattcacgttac 22620354  T
Q  126 ttatttt 132  Q
    |||||||    
T  22620355 ttatttt 22620361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 24306412 - 24306307
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||| |||||||||||||| | | |||||||||||||||||||||||||||| |||||||||| | |||||| | ||||  ||||| |||| ||||||    
T  24306412 cggatttggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattg-cgtttcaaccaaataattcgcgtta 24306314  T
Q  125 cttattt 131  Q
    |||||||    
T  24306313 cttattt 24306307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 16069519 - 16069440
Alignment:
Q  174 aaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||| |||||||||| ||||||||| |||||| ||||| ||||||||||||||| ||||| |||||||||||    
T  16069519 aaatttttatctgcttgcaacagagcaagtttacctgtttt-ggttgtagaaaagtaagcagcagttaggattcttcgaat 16069440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 21973162 - 21973083
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttaga--attcttcgaat 254  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||||  |||||||||||    
T  21973162 aatttttatctgtttgcaacataacaag-ttacctgtttttggttgcagaaaagtaa-cagcggttagaggattcttcgaat 21973083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 26540892 - 26540993
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||| | ||||| || || |  | | |||||||||||||||||    
T  26540892 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattccaactagacaatttgcgttactta 26540990  T
Q  129 ttt 131  Q
    |||    
T  26540991 ttt 26540993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 14781829 - 14781744
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||||| |||||||| |||| ||| ||||| ||||||||||||||||||||| | |||| ||||| |||||||||||    
T  14781829 agttgcaatttttatatgtttgcatcagagcaaatttacctgtttttggttgcagaaaagtgatcagcagttaggattcttcgaat 14781744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 28008184 - 28008325
Alignment:
Q  112 acaatttgcgttacttattttgtaagttgacgatataa--taaaagat--aagggttagagagttgaaatttttatctgtttgcaacagaacaagtttac 207  Q
    |||||| | ||||||||||||  |||||||||||||||  |||||||   |||| ||||||| ||| ||||||||||||||| ||| ||| ||| || ||    
T  28008184 acaattcgtgttacttatttt--aagttgacgatataaaataaaagagtaaaggattagaga-ttgcaatttttatctgtttccaatagagcaaatt-ac 28008279  T
Q  208 ttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  28008280 ttgtttt-ggttgcagaaaagtaagcagcggttaggattctttgaat 28008325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 254
Target Start/End: Original strand, 44795361 - 44795590
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtcc-aaacaatttgcgtt 123  Q
    |||||||| |||||||||| ||    |||||||||||||||| ||||||| ||| |||||||||| | |||||||| |||||||| ||| || | |  ||    
T  44795361 cggattagacaagtgtaccgaagcatttaccaagtaataaagagataagt-gagtatcgtatccacatggattgtcgtttcgtccaaaaaaactcgactt 44795459  T
Q  124 acttattttgtaagttgacgatataat-aaaagataagggtt-agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    ||||||||  || ||||| |||| ||| |||||||||||||| ||||| ||| ||||||||| |||||||| || | | || |||  |||||||||||||    
T  44795460 acttattt--tatgttgatgataaaataaaaagataagggttaagagatttgcaatttttatatgtttgcagcaaagcgag-ttatctgtttttggttgc 44795556  T
Q  222 agaaaagtaagcagcggttaga--attcttcgaat 254  Q
    ||||| |||| || ||||||||  |||||||||||    
T  44795557 agaaatgtaa-caacggttagaggattcttcgaat 44795590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 254
Target Start/End: Original strand, 18825655 - 18825864
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt-att 130  Q
    |||||||||||||| | | | ||||||||||||||||||||||| || |||||||||| | || ||||||||| || | |||||||| |||||||| |||    
T  18825655 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtaaagtatcgtatccacaagggttgtcctttagttcgaacaattttcgttacttaatt 18825753  T
Q  131 ttgtaag-ttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagt 229  Q
    || |||| ||||||||   | ||||| ||          ||||| ||||||||||||||| ||||| | ||| |||||||| ||||||||| ||||||||    
T  18825754 ttataagtttgacgat---acaaaagtta----------agttgcaatttttatctgtttacaacaaagcaaatttacttg-ttttggttgtagaaaagt 18825839  T
Q  230 aagcagcggttagaattcttcgaat 254  Q
    |||||||| | || |||||| ||||    
T  18825840 aagcagcgataaggattctttgaat 18825864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 254
Target Start/End: Complemental strand, 17121446 - 17121379
Alignment:
Q  185 tgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  17121446 tgtttgcaatagagcaagtt-acttgtttt-ggttgcagaaaagtaagcagcggttaggattcttcgaat 17121379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 18100986 - 18100905
Alignment:
Q  157 taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggtta 241  Q
    ||||||||||| | ||| ||||||||||||||||||||| | |||||| || |||||| ||||||||||||||||||||||||||    
T  18100986 taagggttagaaa-ttgcaatttttatctgtttgcaacatagcaagtt-acatgtttt-ggttgcagaaaagtaagcagcggtta 18100905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 188
Target Start/End: Original strand, 24214562 - 24214700
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacgatat--a 148  Q
    ||||||||||||||||||||||||| || |  ||||||| | |||||||  ||||||| |||||| || ||||||||||||  ||||| ||||||||  |    
T  24214562 ttaccaagtaataaagtgataagtacagtactgtatccacatggattgttgtttcgtctaaacaacttacgttacttattt--taagtggacgatataaa 24214659  T
Q  149 ataaaaga--taagggttagagagttgaaatttttatctgtt 188  Q
    ||||||||  |||||||| || | ||| ||||||||||||||    
T  24214660 ataaaagaattaagggtttga-aattggaatttttatctgtt 24214700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 12012906 - 12012803
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    |||||||||||||||| ||||| | ||| |||||| ||||||||||||||||| || ||||||| | | |||||| |||  || |||| ||| |||||||    
T  12012906 ggattaggcaagtgtatcaaatcgtttatcaagtattaaagtgataagtagagtattgtatccacatgaattgtcgttttatctaaactattcgcgttac 12012807  T
Q  126 ttat 129  Q
    ||||    
T  12012806 ttat 12012803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 32383102 - 32383047
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcg 83  Q
    |||||||||||||||||||| | |||||||||||||||||||||| ||||| ||||    
T  32383102 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataaatagagtatcg 32383047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 25404036 - 25403974
Alignment:
Q  187 tttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattctt 249  Q
    ||||||||||| ||| ||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  25404036 tttgcaacagagcaactttacctgtttttggttccagaaaagtaagtagcggttaggattctt 25403974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 15813633 - 15813524
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgat-aagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgt 122  Q
    ||||||||| |||||||||||||| | ||| |||  ||||||||||| |||||||| || ||||||| | |||||||| |||| |  |||||||| | ||    
T  15813633 gcggattagacaagtgtaccaaatcgtttatcaaaaaataaagtgataaagtagagtattgtatccacaaggattgtcgtttctttgaaacaattcgtgt 15813534  T
Q  123 tacttatttt 132  Q
    ||||||||||    
T  15813533 tacttatttt 15813524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 23179921 - 23180005
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||||||||||| ||| | ||||| ||||| | |||||||||| |||||||||||||||||| || ||| |||||||    
T  23179921 agttgcaatttttatctgtttacaaaataacaattttacct-tttttggttggagaaaagtaagcagcggtaaggattattcgaat 23180005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 24054001 - 24054085
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt-tgtaagtt 139  Q
    ||||||||||||| |||||||||| ||| |||||| | ||||||||||||||||  ||||||||  ||||||||||| ||||||||    
T  24054001 caagtaataaagtaataagtagagtatc-tatccacagggattgtcctttcgtctcaacaatttttgttacttatttatgtaagtt 24054085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 26649075 - 26648971
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    |||||| |||||||| ||||| | ||||||||||||||| |||||||| ||  || ||||||| | ||||| || |||||||||||||| | |||||| |    
T  26649075 gattagacaagtgtatcaaatcgtttaccaagtaataaaatgataagt-gaatattgtatccacatggattatcgtttcgtccaaacaactcgcgttatt 26648977  T
Q  127 tatttt 132  Q
    ||||||    
T  26648976 tatttt 26648971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 17121584 - 17121509
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctt 103  Q
    |||||| |||||||| ||||||| ||| |||||||||||||| ||||||||| ||| |||||||| ||||| |||||    
T  17121584 gattagacaagtgtatcaaattgtttatcaagtaataaagtg-taagtagagtatcatatccataaggattctcctt 17121509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 18529148 - 18529082
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttag 242  Q
    ||||||||||  ||||||||||| ||||||||| || ||||||||| |||||||||||||| ||||||    
T  18529148 aatttttatcaatttgcaacagagcaagtttacctg-ttttggttgtagaaaagtaagcagtggttag 18529082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 24267889 - 24267783
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| |||||||| |||||   ||| ||||||||||| ||||||||| || ||| ||||||||  ||||||  ||||||| || |||||  |||||    
T  24267889 cggattagacaagtgtatcaaatcatttatcaagtaataaaatgataagtatagtatcatatccatatagattgttgtttcgtctaatcaattcacgtta 24267790  T
Q  125 cttattt 131  Q
    |||||||    
T  24267789 cttattt 24267783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 727489 - 727566
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    |||||||||||||||||||||||| |||| ||||| | |||||   ||||||||| |||||||   ||||||||||||    
T  727489 caagtaataaagtgataagtagagtatcgcatccacaaggattactctttcgtccgaacaattcttgttacttatttt 727566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 18830481 - 18830565
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatt 117  Q
    |||||||||||||| | | | ||||||||| |||||||||  || |  |||||||||| | |||||||||||||||||||||||||    
T  18830481 ggcaagtgtaccaa-tggttgaccaagtaacaaagtgatacttaaattatcgtatccacagggattgtcctttcgtccaaacaatt 18830565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 254
Target Start/End: Complemental strand, 12012799 - 12012692
Alignment:
Q  146 ataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttaga 243  Q
    |||||||||||  ||||||||||||| ||| ||||||||| ||||||||||| | | || |||| || ||||||||||| |||||||| || || ||||     
T  12012799 ataataaaagagttaagggttagaga-ttgcaatttttatttgtttgcaacatagcgag-ttacctg-ttttggttgcacaaaagtaaacaacgattagg 12012703  T
Q  244 attcttcgaat 254  Q
    |||||||||||    
T  12012702 attcttcgaat 12012692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 24054109 - 24054187
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||  |||||| ||||  | ||||| |||||||||||    
T  24054109 aatttttatctgtttgcaacagagcgaatttacttg-ttttggttgttgaaaagaaagcgacagttaggattcttcgaat 24054187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 32382964 - 32382887
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||||||| ||| || || |||||| ||||||||||| || |||||| ||||| |||||| ||||    
T  32382964 aatttttatctgtttgcaacagagcaaatt-acctgtttt-ggttgcagaaatgttagcagccgttaggattctttgaat 32382887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 14781930 - 14781876
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtcc 109  Q
    |||||||||||||  ||||||||| |||||||||| | | |||||||||||||||    
T  14781930 caagtaataaagtagtaagtagagtatcgtatccacaagaattgtcctttcgtcc 14781876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 15813463 - 15813421
Alignment:
Q  212 ttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||    
T  15813463 ttttggttgcagaaaagtaagcagcagttagtattcttagaat 15813421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 16359865 - 16359903
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaa 65  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  16359865 gattaggcaagtgtaccaaatcgtttaccaagtaataaa 16359903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 23179819 - 23179897
Alignment:
Q  55 caagtaataaagtga-taagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    ||||||||||||| | ||| ||||| ||| |||||| | ||||||||||||||||| |||||||  ||||| |||||||    
T  23179819 caagtaataaagttagtaaatagagtatcatatccacagggattgtcctttcgtccgaacaattctcgttatttatttt 23179897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 18830606 - 18830670
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagca 234  Q
    ||||| ||||| |||||||||||||||||  || ||||| || ||||||||||| |||||||||||    
T  18830606 agttgcaatttctatctgtttgcaacagagaaattttacctg-ttttggttgcataaaagtaagca 18830670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 34480964 - 34481013
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtaga 77  Q
    ||||| ||| ||||| |||| | |||||||||||||||||||||||||||    
T  34480964 attagacaaatgtacaaaatcgtttaccaagtaataaagtgataagtaga 34481013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 727593 - 727676
Alignment:
Q  170 gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||| ||||||||| ||||||||||| |  || ||||| |||||| |||||||||||   ||||||||||||  |||||||||||    
T  727593 gttgcaatttttatttgtttgcaacatagaaaatttacctgtttt-ggttgcagaaagtaaagcagcggttaagattcttcgaat 727676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 24 - 254
Target Start/End: Original strand, 69073 - 69301
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtc-ctttcgtccaaacaatttgcgt 122  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| | |||||||| ||||| |||||||||||||| |    
T  69073 gcggattaggcaagtgtaccaaatca-ttaccaagtaataaagtgataagttgagaatcgtatccacaaggattgtcactttc-tccaaacaatttgcat 69170  T
Q  123 tacttattttgtaagttgacgatataataaaaga-taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    | |||||||  | ||||||| |||||||||| || ||||||||| ||| ||| |||||||||||||||||||||||  |||||||| |||| ||   |||    
T  69171 tgcttattt--ttagttgacaatataataaacgagtaagggttatagaattgcaatttttatctgtttgcaacagagaaagtttacctgttcttacatgc 69268  T
Q  222 agaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||| |||||||||||||| |||||| ||||    
T  69269 agaaaaataagcagcggttaggattcttagaat 69301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 81475 - 81570
Alignment:
Q  21 tgggcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatt 117  Q
    |||| ||||||||||||| ||| |||| | ||||||| |||||||||||||||||| | || ||||||| | |||||||  ||||||| ||| ||||    
T  81475 tgggtggattaggcaagtttacgaaatcgtttaccaaataataaagtgataagtag-gtattgtatccacatggattgtggtttcgtcaaaataatt 81570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 31 - 250
Target Start/End: Original strand, 69911 - 70129
Alignment:
Q  31 aggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-t 129  Q
    |||||||||||||||||   ||||||||||||||||||| ||||| || ||||||| || | |||||||| ||||||||||||||||  ||||||||| |    
T  69911 aggcaagtgtaccaaatcatttaccaagtaataaagtgacaagtaaagtatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttatt 70010  T
Q  130 tttgtaagttgacgatataataaaagataagggttagaga-gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaag 228  Q
    |||||| ||||| |||   ||||||||||| ||||||| | |||| ||||||||| ||||||||| ||| ||||||||| |||||||||||| |||||||    
T  70011 tttgtatgttgatgat---ataaaagataaaggttagaaaggttgcaatttttatttgtttgcaatagagcaagtttacctgtttttggttgtagaaaag 70107  T
Q  229 taagcagcggttagaattcttc 250  Q
    |||||||| ||||| |||||||    
T  70108 taagcagcagttaggattcttc 70129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 51 - 253
Target Start/End: Complemental strand, 904 - 701
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg-taagtt-gacgatata 148  Q
    |||||||||||||||||||||||||||| |||||||||||   ||||||| |||||||||||||||   |||||||||||||  |||||| |||||||||    
T  904 ttaccaagtaataaagtgataagtagagtatcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttatttttataagtttgacgatata 805  T
Q  149 ataaaagataagggtt-agagag-ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaatt 246  Q
    |   |||||||||||| ||| || ||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||||||| ||||||||  |||    
T  804 a---aagataagggtttagaaagattgcaatttttatctgtttgcaacagagaaagtttacctgtttttggttgcagaaaagtaagaagcggttaagatt 708  T
Q  247 cttcgaa 253  Q
    |||||||    
T  707 cttcgaa 701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 34 - 254
Target Start/End: Original strand, 17431884 - 17432103
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg 133  Q
    ||||||||| |||| | ||||||||||||||||||  |||||||| |||||||||| |  ||||||| |||| ||||||||| |  || ||||||||||     
T  17431884 caagtgtactaaatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacagagattgtcgtttcatccaaacaactcacgctacttattttt 17431983  T
Q  134 -taagtt--gacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagta 230  Q
     ||||||  | ||||||||   || |||||||||| ||||||| ||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  17431984 ataagttttggcgatataa---aatataagggttaaagagttgtaatttttttctgtttgcaacagagcaagtttacttg-ttttggttgcagaaaagta 17432079  T
Q  231 agcagcggttagaattcttcgaat 254  Q
    |||||||||||| |||||||||||    
T  17432080 agcagcggttaggattcttcgaat 17432103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 206
Target Start/End: Complemental strand, 19004326 - 19004153
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    ||||||||||| |||| | |||||||||||||||||||||||| ||| |||||||||| | |||||||| ||| ||||||||||||  ||||||||| ||    
T  19004326 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtggagtatcgtatccacatggattgtcattttgtccaaacaattcacgttacttattt 19004227  T
Q  131 ttgtaag-ttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagttta 206  Q
    ||||||| ||||||||   ||||||||||||||||| | ||||| ||||||||||||||||||||||  ||||||||    
T  19004226 ttgtaagtttgacgat---ataaaagataagggttaaatagttgcaatttttatctgtttgcaacagggcaagttta 19004153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 34 - 254
Target Start/End: Complemental strand, 24245642 - 24245422
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tttt 132  Q
    |||||||  ||||| |||||||| ||||||||||||||||||||| |||||||||| | |||||||| |||||||||||||| | |||||||||| ||||    
T  24245642 caagtgtcacaaatcgcttaccatgtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaactcgcgttacttattttt 24245543  T
Q  133 gtaagttgacgatataataaaagataagggttagaga-gttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaa 231  Q
    |||||||||  |||||| || | | |||||||||| | |||   |||||||| ||||| ||||| | ||||||||| || |||| |||||||||||||||    
T  24245542 gtaagttgagaatataa-aagataaaagggttagaaaggtttcgatttttatttgtttccaacaaagcaagtttacctg-ttttagttgcagaaaagtaa 24245445  T
Q  232 gcagcggttagaattcttcgaat 254  Q
    ||| ||||||| |||||||||||    
T  24245444 gcaacggttaggattcttcgaat 24245422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 25 - 254
Target Start/End: Complemental strand, 18208355 - 18208129
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||||| | |||| ||||||||||||| ||||||||| |||||||||| | |||||||||||||||||||||||||   ||||    
T  18208355 cggattaggcaagtgtaccaaatcgtttacaaagtaataaagtg-taagtagagtatcgtatccacatggattgtcctttcgtccaaacaattcatgtta 18208257  T
Q  125 cttattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    ||||||||||   |||| |||||  |||||||||  |||||||| ||| |||| ||||||||||||||||||  ||| |||| |||| ||  ||||||||    
T  18208256 cttattttgt--tttgatgatataaaataaaagagttaagggttggag-gttgcaatttttatctgtttgcagtagagcaag-ttacctg--tttggttg 18208163  T
Q  221 cagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||||| ||| |||| || |||||||||    
T  18208162 cagaaaagtaagtagcagttacaactcttcgaat 18208129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 25550609 - 25550487
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||||| ||| |||||| | |||||||| ||||||||||||||||   ||||||    
T  25550609 gattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcatttcgtccaaacaattcttgttact 25550510  T
Q  127 tattttgtaagttgacgatataa 149  Q
    |||||||||||||||||||||||    
T  25550509 tattttgtaagttgacgatataa 25550487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 229
Target Start/End: Original strand, 34487640 - 34487832
Alignment:
Q  35 aagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgt 134  Q
    ||||||||||||||| |||||||||||||||||| ||||||||  ||| |||||| | |||||||| ||||||| |||||||| ||||||||||||||||    
T  34487640 aagtgtaccaaattgtttaccaagtaataaagtg-taagtagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttattttgt 34487738  T
Q  135 aagttgacgatataat-----aaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagt 229  Q
       |||||||||||||     ||||||||||||||||||| ||| ||||||||||||||| ||||||| ||| ||||| ||  |||||||||||||||||    
T  34487739 --tttgacgatataataataaaaaagataagggttagaga-ttgcaatttttatctgttttcaacagagcaa-tttacatg--tttggttgcagaaaagt 34487832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 102 - 254
Target Start/End: Complemental strand, 20744698 - 20744548
Alignment:
Q  102 tttcgtccaaacaatttgcgttacttatttt-gtaagtt-gacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaac 199  Q
    ||||||||||||| ||  ||||||||||||| ||||||| ||||||||||   ||| ||||||||||||||||| ||||||||||||||||||||| | |    
T  20744698 tttcgtccaaacatttcacgttacttatttttgtaagtttgacgatataa---aagttaagggttagagagttgcaatttttatctgtttgcaacatagc 20744602  T
Q  200 aagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||| || ||||||||| ||||||||||||||||||||| |||||||||||    
T  20744601 aagtttacctg-ttttggttgtagaaaagtaagcagcggttaggattcttcgaat 20744548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 20315529 - 20315308
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    |||||||||||||| | | |||||||||||||| ||||||||||||| |||||||||| | ||||| ||||||||||||||||||| |||| ||||||||    
T  20315529 ggcaagtgtaccaa-tcgtttaccaagtaataatgtgataagtagagtatcgtatccacatggattatcctttcgtccaaacaattcgcgtaacttattt 20315431  T
Q  132 t--gtaagttgacgatataataaaagataagggtt--agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaa 227  Q
    |   ||||||||||||   ||||||  |||||| |  ||| | ||| ||||||||||||||||||||| | ||||||||| || ||||||||||| || |    
T  20315430 ttattaagttgacgat---ataaaatttaagggataaagaaacttgcaatttttatctgtttgcaacaaagcaagtttacatg-ttttggttgcaaaata 20315335  T
Q  228 gtaagcagcggttagaattcttcgaat 254  Q
    ||||| |||| ||||  ||||||||||    
T  20315334 gtaagaagcgattagggttcttcgaat 20315308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 254
Target Start/End: Original strand, 34128636 - 34128856
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    |||||||||||||| | | | |||||||||||||||||||||||||  |||||||||| | | |||||||||||||||||| ||||  |||| |||||||    
T  34128636 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtagaatatcgtatccacaggaattgtcctttcgtccaaaaaattctcgtttcttattt 34128734  T
Q  132 tg-taagttgacgatataataaaagataagggttagagag--ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaag 228  Q
    |  |||||||| | |||||   ||| ||||||||| | ||  |||||||||| |  ||||||||| ||| ||||||||| |||||| |||||||||||||    
T  34128735 ttataagttgaaggtataa---aagttaagggttaaaaagacttgaaattttgacttgtttgcaatagagcaagtttacctgtttt-ggttgcagaaaag 34128830  T
Q  229 taagcagcggttagaattcttcgaat 254  Q
    |||||| ||||||| |||||||||||    
T  34128831 taagcaacggttaggattcttcgaat 34128856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 34 - 254
Target Start/End: Original strand, 39434464 - 39434675
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt- 132  Q
    |||||||||||| | | ||||||||||||||| ||||||||||| ||||||||||| | |||||||||||| |||||||||||| ||||||||||||||     
T  39434464 caagtgtaccaa-tcgtttaccaagtaataaattgataagtagaaaatcgtatccacatggattgtccttttgtccaaacaattcgcgttacttattttt 39434562  T
Q  133 -gtaagttgacgatataataaaagataagggtt--agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagt 229  Q
      ||| ||||||||   ||||||| ||||||||  | ||| ||| ||||||||||||||||        ||||||||| || ||||| ||||||||||||    
T  39434563 attaacttgacgat---ataaaagttaagggttaaaaagaattgcaatttttatctgtttg--------caagtttacctg-ttttgtttgcagaaaagt 39434650  T
Q  230 aagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||| |||||||||||    
T  39434651 aagcaacggttaggattcttcgaat 39434675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 22755513 - 22755694
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||| |||||||||| ||| | |||||||||||| ||| ||||||||||| |||||||||||| |||||||| |||| ||||||||||| || |||    
T  22755513 cggattagacaagtgtaccgaatcgtttaccaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtttcttccaaacaattggcatta 22755612  T
Q  125 cttattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtt 204  Q
     ||||||  ||  || |||||||  |||||||||  ||||||||||||| ||  ||||||||||||||||||||||| ||||||    
T  22755613 tttattt--tagttttacgatataaaataaaagagttaagggttagagatttacaatttttatctgtttgcaacagagcaagtt 22755694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 18937740 - 18937945
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||||| | |||  |||||||||||||||||||| || ||||||| || | |||||||  ||||||||||||||||  |||||    
T  18937740 cggattaggcaagtgtaccaaatcgtttattaagtaataaagtgataagta-agtatcgtattcagagggattgttgtttcgtccaaacaattcacgtta 18937838  T
Q  125 cttattttgtaagttgacgatat--aataaa-agataagggtt-agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  |||||| | |||||  |||||| || |||||||| ||||| ||  ||||||||||||||||||||||| |||| |||| ||||||||||||    
T  18937839 cttattt--taagttaatgatataaaataaagagttaagggttgagaga-tttcaatttttatctgtttgcaacagagcaag-ttacatgtttttggttg 18937934  T
Q  221 cagaaaagtaa 231  Q
    |||||| ||||    
T  18937935 cagaaatgtaa 18937945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 254
Target Start/End: Complemental strand, 24267058 - 24266837
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||| | ||||| || ||| |||||||||||| | |||||||    
T  24267058 attaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttactt 24266960  T
Q  128 attttgtaagttgacgatataataa---aaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||||   |||||||||||||||   ||||  ||||||||||| | ||| |||||||||||||||| |||| | ||||   || ||  ||||||| ||    
T  24266959 attttgtt--ttgacgatataataataaaagagttaagggttagata-ttgcaatttttatctgtttgtaacaaagcaag---acctg--tttggttaca 24266868  T
Q  223 gaaaagtaagcagcggttagaattcttcgaat 254  Q
    | |||||||||||||||||| | |||||||||    
T  24266867 g-aaagtaagcagcggttaggactcttcgaat 24266837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 254
Target Start/End: Complemental strand, 24343689 - 24343468
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||| | ||||| || ||| |||||||||||| | |||||||    
T  24343689 attaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttactt 24343591  T
Q  128 attttgtaagttgacgatataataa---aaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||||   |||||||||||||||   ||||  ||||||||||| | ||| |||||||||||||||| |||| | ||||   || ||  ||||||| ||    
T  24343590 attttgtt--ttgacgatataataataaaagagttaagggttagata-ttgcaatttttatctgtttgtaacaaagcaag---acctg--tttggttaca 24343499  T
Q  223 gaaaagtaagcagcggttagaattcttcgaat 254  Q
    | |||||||||||||||||| | |||||||||    
T  24343498 g-aaagtaagcagcggttaggactcttcgaat 24343468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 250
Target Start/End: Original strand, 24140442 - 24140652
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    |||||||||||||| | | |||||||||||||||||||||||||||| || |||||||   ||||||||||||||||||||||||| ||||||| |||||    
T  24140442 ggcaagtgtaccaa-tcgtttaccaagtaataaagtgataagtagagtattgtatccactgggattgtcctttcgtccaaacaattcgcgttacatattt 24140540  T
Q  132 t--gtaagttgacgatataataaaagataagggtt--agagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaa 227  Q
    |   |||||| |||||          |||||||||  ||||| ||  ||||||||||||| ||| ||||| ||||||||| |  ||||||||||||||||    
T  24140541 ttattaagttaacgat----------ataagggttaaagagacttccaatttttatctgtgtgcgacagagcaagtttacct-attttggttgcagaaaa 24140629  T
Q  228 gtaagcagcggttagaattcttc 250  Q
    ||||||| ||||||| |||||||    
T  24140630 gtaagcaacggttaggattcttc 24140652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 15375982 - 15375773
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    |||||||||||||||| | ||||||| ||||||| |||||||||||| ||| |||||| | |||||||| ||||||||||| ||||||| ||||||| ||    
T  15375982 ggcaagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatcctatccacagggattgtcgtttcgtccaaaaaatttgcattacttattt 15375883  T
Q  131 ttgtaagttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagta 230  Q
    ||| ||||||||| ||||| |           |||||   ||| ||||||||| ||||||||||||| ||||||  | | |||||||||||| |||||||    
T  15375882 ttgcaagttgacggtataaaa-----------ttaga---ttgcaatttttatttgtttgcaacagagcaagttcgcctatttttggttgcataaaagta 15375797  T
Q  231 agcagcggttagaattcttcgaat 254  Q
    || | ||||||| |||||||||||    
T  15375796 agtaacggttaggattcttcgaat 15375773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 25402441 - 25402278
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||||||||||||||||||||| || ||||||||  ||||||||||||||| || ||||||| | |||||||| |||||||| ||  ||| |||||||||    
T  25402441 attaggcaagtgtaccaaattgtttgccaagtaaggaagtgataagtagagtattgtatccacagggattgtcgtttcgtcctaatgattcgcgttactt 25402342  T
Q  128 attttgtaag-ttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttg 190  Q
    ||||  |||| ||||| ||| |||||||||   |||||||||||| ||| ||||||||||||||||    
T  25402341 attt--taagtttgacaataaaataaaagagtgaagggttagagatttgcaatttttatctgtttg 25402278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 20564056 - 20563970
Alignment:
Q  168 gagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||||    
T  20564056 gagttgcaatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagaaaagtaagaagcagttaggattcttcgaat 20563970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 254
Target Start/End: Original strand, 15690771 - 15690996
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    |||||||| |||| |||||||| | ||||||| |||||||||||||||||||| ||||||||||   | |||||| |||||||||| |||||  ||||||    
T  15690771 ggattaggtaagtttaccaaatcgtttaccaa-taataaagtgataagtagagtatcgtatccacgagaattgtcgtttcgtccaaccaattctcgttac 15690869  T
Q  126 ttattttgtaagttgacgatataataaaaga---taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    ||||||  | ||||||| |   |||||||||    |||||||||||| ||| ||||||||| |||| | |||||| |||  |||| || |||||||||||    
T  15690870 ttattt--ttagttgacaaataaataaaagagttaaagggttagagatttgcaatttttatttgttcgtaacagagcaa-attacctg-ttttggttgca 15690965  T
Q  223 gaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||||||  ||||| |||||||||||    
T  15690966 gaaaagtaagcag-tgttaggattcttcgaat 15690996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 254
Target Start/End: Original strand, 36175126 - 36175353
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    |||||||  |||||||||||||| | |||||||||||||||||| |  |||||| |||||||||||| |||||||| ||||||||||||||  |||||||    
T  36175126 cggattaaacaagtgtaccaaatcgtttaccaagtaataaagtgttt-gtagagtatcgtatccataaggattgtcgtttcgtccaaacaacatgcgtta 36175224  T
Q  125 ctta-ttttgtaagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    |||| ||||| |   | |  ||| |||||||||  | ||||||||||| ||| ||||||||||||||| ||||| | |||| |||| || |||||||||     
T  36175225 cttatttttgaacaattaaaata-aataaaagagttgagggttagaga-ttgcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgt 36175320  T
Q  222 agaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||| ||||||||  |||||| ||||    
T  36175321 agaaaagtaagaagcggttatgattctttgaat 36175353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 241
Target Start/End: Complemental strand, 19283962 - 19283748
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||| ||||| || |||| | ||||||| |||||||||||||||||||| || ||||||| | | |||  | ||||||||||||||||||| | |    
T  19283962 cggattaggaaagtgcactaaatcgtttaccaaataataaagtgataagtagagtattgtatccacaagaattaacgtttcgtccaaacaatttgcttaa 19283863  T
Q  125 cttattttgtaagttgacgatataa--taaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttg 220  Q
    |||||||  ||||||||||||||||  |||||||  ||||||||||||| ||  |||||| |||| ||||||| |||  ||| |||| ||  ||||||||    
T  19283862 cttattt--taagttgacgatataaagtaaaagagttaagggttagaga-ttacaattttaatctatttgcaatagagaaag-ttacctg--tttggttg 19283769  T
Q  221 cagaaaagtaagcagcggtta 241  Q
     |||||| |||||||||||||    
T  19283768 tagaaaattaagcagcggtta 19283748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 17171660 - 17171553
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||| |||||||||||||   ||| |||||||||||||||||||||||| |||||||||| | |||||||| ||||||| || ||||| ||||||    
T  17171660 cggattaggtaagtgtaccaaatcttttatcaagtaataaagtgataagtagagcatcgtatccacatggattgtcgtttcgtctaagcaattcgcgtta 17171561  T
Q  125 cttatttt 132  Q
     |||||||    
T  17171560 attatttt 17171553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 23388935 - 23388838
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    |||||||||||| ||| | |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| |||||||   ||||||||||||    
T  23388935 caagtgtaccaa-ttgttaaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttt 23388838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 15469928 - 15470020
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatt 117  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||| || ||| |||||||||| | | |||||| ||||||| ||||||||    
T  15469928 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataggtcgagtatcgtatccacatgaattgtcgtttcgtctaaacaatt 15470020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 254
Target Start/End: Original strand, 26120860 - 26121083
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||||| ||||||||||||||| |||||| ||||||||||  ||||||||| ||| ||| || | |||||||| |||||||||||||||| || ||||||    
T  26120860 attaggaaagtgtaccaaattgtttaccatgtaataaagtt-taagtagagtatcatattcaaaaggattgtcgtttcgtccaaacaattagcattactt 26120958  T
Q  128 attttgtaagttgacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaa 225  Q
    |||||  ||    |  ||| |||||||||  | ||||||||| | ||  |||||||||||||||||| || |  |||  ||| ||||||  |||||||||    
T  26120959 atttttgaacaataaaataaaataaaagagttgagggttagata-ttttaatttttatctgtttgcagcatagaaag-atacctgtttt--gttgcagaa 26121054  T
Q  226 aagtaagcagcggttagaattcttcgaat 254  Q
    | |||||||| ||||||||||||||||||    
T  26121055 atgtaagcagtggttagaattcttcgaat 26121083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 24852278 - 24852173
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    ||||||||||||| ||| |||| | ||||||||||||||| ||||||||| || |||||||||| | |||||||  ||||||| ||||||||  ||||||    
T  24852278 ggattaggcaagtctactaaatcgattaccaagtaataaaatgataagtatagtatcgtatccacatggattgttgtttcgtctaaacaattcacgttac 24852179  T
Q  126 ttattt 131  Q
    ||||||    
T  24852178 ttattt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 23380360 - 23380258
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||| |  ||||||| |||| |||||||| ||||  | | |||| ||||| ||||||    
T  23380360 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtattcatatggattgtcatttcaacaagacaacttgcgctactta 23380261  T
Q  129 ttt 131  Q
    |||    
T  23380260 ttt 23380258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 16523766 - 16523681
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||||||||||||||||||| | | ||||| ||||||| |||  ||||||||||||||||||||| |||||| ||||    
T  16523766 agttgcaatttttatctgtttgcaacagagcgaatttacctgttttttgttatagaaaagtaagcagcggttaggattctttgaat 16523681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 28664796 - 28664873
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    |||||||||||||||||||||||| ||||||| |||| ||| ||||||||||| | |||||||  |||||||||||||    
T  28664796 caagtaataaagtgataagtagagtatcgtattcatagggactgtcctttcgtgcgaacaattctcgttacttatttt 28664873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 17315177 - 17315100
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    ||||||||||||||||||||| || |||||||||| | ||||||||||||| ||| |||||||   ||||||||||||    
T  17315177 caagtaataaagtgataagtaaagtatcgtatccacatggattgtcctttcttccgaacaattctagttacttatttt 17315100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 20549681 - 20549597
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaa 253  Q
    ||||| |||||||| |||||| |||||||   | ||||| |||||||||||||||  ||||||||||||||||| ||||||||||    
T  20549681 agttgcaatttttacctgtttacaacagagtgattttacctgtttttggttgcaggcaagtaagcagcggttaggattcttcgaa 20549597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 28664904 - 28664982
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||||||| | | ||||| |||||| |||||||||||| |||||| ||||||  |||||||||||    
T  28664904 aatttttatctgtttgcaacagagcgaatttacctgtttt-ggttgcagaaaaataagcaacggttaagattcttcgaat 28664982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 17185459 - 17185561
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    |||| ||||||||| ||||   ||||||| |||||||||||||||||||| |||||||| | | |||||||| ||||  ||||||||||  |||||| ||    
T  17185459 ttagacaagtgtactaaatcatttaccaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttcaaccaaacaattcacgttacgta 17185558  T
Q  129 ttt 131  Q
    |||    
T  17185559 ttt 17185561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 19086286 - 19086233
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagag 78  Q
    ||||||||  ||||||||||||| | ||||||||||||||||||||||||||||    
T  19086286 cggattagataagtgtaccaaatcgtttaccaagtaataaagtgataagtagag 19086233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 24656958 - 24656854
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    |||||||||||||||||| || | || |||| ||||||| | ||||||||||||||  ||| | | |||||||  ||||||| |||||||| | ||||||    
T  24656958 gattaggcaagtgtaccagatagtttcccaattaataaaattataagtagagaatcaaatcaacatggattgttgtttcgtctaaacaattcgtgttact 24656859  T
Q  127 tattt 131  Q
    |||||    
T  24656858 tattt 24656854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 26835796 - 26835869
Alignment:
Q  179 tttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||| | | ||||| ||||||  |||||||||||||| ||||| ||||| |||||||||||    
T  26835796 tttatctgtttgcaacagagcgaatttacctgtttt--gttgcagaaaagtatgcagcagttaggattcttcgaat 26835869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 24260643 - 24260723
Alignment:
Q  159 agggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggtta 241  Q
    ||||||||||| ||| ||||||||||||||||||||||| ||||||  ||   ||||||||||||||| || || ||||||||    
T  24260643 agggttagagatttgcaatttttatctgtttgcaacagagcaagttacct--attttggttgcagaaatgttaggagcggtta 24260723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 26121430 - 26121328
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||||||| | ||| ||||||||||| || ||||||||| || ||||||| | ||||| |  |||| |||||  |||||| ||||    
T  26121430 cggattaggcaagtgtaccaaatcgtttagcaagtaataaaatg-taagtagagtatagtatccacagggatttttgtttcatccaataaatttgtgtta 26121332  T
Q  125 ctta 128  Q
    ||||    
T  26121331 ctta 26121328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 20549766 - 20549704
Alignment:
Q  70 taagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    ||||||||| |||||||||| | ||||||||||||||||| |||||||   ||||||||||||    
T  20549766 taagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttatttt 20549704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 20858707 - 20858784
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    ||||||||||| |||||||||||| ||||||||||    ||||||||||| |||| |||||||   ||||||||||||    
T  20858707 caagtaataaaatgataagtagagtatcgtatccacggagattgtccttttgtccgaacaattcttgttacttatttt 20858784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 15544047 - 15544114
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggatt 97  Q
    ||||||||||||||||||| | ||||||||||||||| || | ||||||| ||||||| |||| |||||    
T  15544047 ttaggcaagtgtaccaaatcgtttaccaagtaataaactg-tcagtagagtatcgtatacatagggatt 15544114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 19051540 - 19051604
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatcc 88  Q
    |||||||||  ||||||||||||| | |||| ||||||||||||||||||| |||  ||||||||    
T  19051540 gcggattagaaaagtgtaccaaatcgtttacaaagtaataaagtgataagttgagtgtcgtatcc 19051604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 20419951 - 20419995
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataa 72  Q
    |||||| ||||||||||||| | ||||||||||||||||||||||    
T  20419951 attaggtaagtgtaccaaatcgtttaccaagtaataaagtgataa 20419995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 23265176 - 23265252
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt 131  Q
    ||||| ||||||||||||||| |  |||||||||||| ||||| || ||||  ||||||||||  ||||||||||||    
T  23265176 caagtgataaagtgataagtaaaatatcgtatccatatggattttcatttcaaccaaacaattcacgttacttattt 23265252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 20564158 - 20564099
Alignment:
Q  55 caagtaataaagtga-taagtagagaatcgtatccatacggattgtcctttcgtccaaac 113  Q
    ||||||||||||| | ||||||||| |||||||||| | ||||||| |||||||||||||    
T  20564158 caagtaataaagttagtaagtagagtatcgtatccacatggattgttctttcgtccaaac 20564099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 20858815 - 20858893
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||||||| |||||||||| | | | ||||| | |||| ||||||| ||||||||||||||||||| |||| ||||||    
T  20858815 aatttttatcggtttgcaacaaagcgaatttacctatttt-ggttgcataaaagtaagcagcggttaggattcgtcgaat 20858893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 24167691 - 24167600
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaat 116  Q
    ||||||||| |||||||  |||| | |||||||||||||||||  ||||||||| ||| |||  | | |||||||| |||| ||||||||||    
T  24167691 cggattaggtaagtgtattaaatcgtttaccaagtaataaagtagtaagtagagtatcatatatacatggattgtcgtttcttccaaacaat 24167600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 26110568 - 26110462
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgtta 124  Q
    ||||||||||||||||||| ||| | ||| ||||||||||| || ||||||||| ||  |||||| | ||||| |  |||| ||||| ||||||| ||||    
T  26110568 cggattaggcaagtgtaccgaatcgtttatcaagtaataaaatg-taagtagagtataatatccacagggatttttgtttcatccaatcaatttgtgtta 26110470  T
Q  125 cttatttt 132  Q
    | ||||||    
T  26110469 catatttt 26110462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 26121280 - 26121202
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||| ||| ||||||  ||  ||||||||| |||||||||||| || |||||| |||||| ||||    
T  26121280 aatttttatctgtttgcaagagagcaagttatcta-tttttggttacagaaaagtaagtagtggttaggattctttgaat 26121202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 15470062 - 15470111
Alignment:
Q  156 ataagggtt-agagagttgaaatttttatctgtttgcaacagaacaagtt 204  Q
    ||||||||| ||||| |||||||||| |||||||||||||||| ||||||    
T  15470062 ataagggtttagagatttgaaattttgatctgtttgcaacagagcaagtt 15470111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 20744911 - 20744866
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtaga 77  Q
    ||||||||||||||||   ||||||||||||||||||||| |||||    
T  20744911 ggcaagtgtaccaaatcatttaccaagtaataaagtgatatgtaga 20744866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 24662257 - 24662212
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgat 70  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  24662257 cggattaggtaagtgtaccaaatcgtttatcaagtaataaagtgat 24662212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 23014711 - 23014637
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttc 105  Q
    ||||||||||||| ||||| | ||| ||| |||||||||||||||||||| || |||||| || |||||||| ||||    
T  23014711 ttaggcaagtgtatcaaat-gattatcaaataataaagtgataagtagagtattgtatcc-taaggattgtcgtttc 23014637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 24260563 - 24260615
Alignment:
Q  80 atcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    |||||||||| | |||||||| ||||||||||| |||  ||||||||||||||    
T  24260563 atcgtatccacaaggattgtcatttcgtccaaaaaatccgcgttacttatttt 24260615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 168403 - 168189
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttact 126  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| | |||||||| |||| || ||| |  | | ||||||    
T  168403 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttcttctaaatagctcgtgttact 168305  T
Q  127 tattttgtaagttgacgatat--aataaaag--ataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgca 222  Q
    |||||  ||||||||||||||  ||||||||  |||||||||||||| ||  ||||||||||||||||||||||| |||| ||||||||||||||||| |    
T  168304 tattt--taagttgacgatataaaataaaagacataagggttagaga-tttcaatttttatctgtttgcaacagagcaag-ttacttgtttttggttgta 168209  T
Q  223 gaaaagtaagcagcggttag 242  Q
    |||||| || || |||||||    
T  168208 gaaaaggaaacaacggttag 168189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 241
Target Start/End: Original strand, 39576 - 39792
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtcc-aaacaatttgcgtt 123  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||| |  ||||||  ||| |||| ||| || |  | ||    
T  39576 cggattaggcaagtgtacaaaattatttaccaagtaataaagtgataagtagagcatcgtatccacattgattgttgttttgtccaaaaaaactcacttt 39675  T
Q  124 acttattttgtaagttgacgatat--aataaa--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggtt 219  Q
    ||||||||  ||||||||||||||  ||||||  |||||||  ||||||| ||| ||||||||||||||||||||||| |||| |||| || ||||||||    
T  39676 acttattt--taagttgacgatataaaataaaagagataagaattagaga-ttgcaatttttatctgtttgcaacagagcaag-ttacctg-ttttggtt 39770  T
Q  220 gcagaaaagtaagcagcggtta 241  Q
    ||||||||||||||||||||||    
T  39771 gcagaaaagtaagcagcggtta 39792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 242
Target Start/End: Original strand, 722 - 936
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttg-cgttac 125  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | | |||||||| |||||||||||||||  | ||||||    
T  722 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatcaacaaggattgtcgtttcgtccaaacaatccgacgttac 821  T
Q  126 ttattttgtaagttgacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgc 221  Q
    ||||||  |||||||| |||||  |||||||||  ||||||||||||| ||  |||||||| ||||||||||||||  |||  ||| ||  ||||||||     
T  822 ttattt--taagttgaagatataaaataaaagagttaagggttagaga-tttcaatttttacctgtttgcaacagagtaag-atacctg--tttggttgt 915  T
Q  222 agaaaagtaagcagcggttag 242  Q
    |||||| ||||||||||||||    
T  916 agaaaactaagcagcggttag 936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 254
Target Start/End: Complemental strand, 36076 - 35872
Alignment:
Q  51 ttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaag-ttgacgatataa 149  Q
    |||| ||||||||||||||||||||||| |||||||||| | | |||||| |||| |||||| |||| | |||||||||||  |||| ||||||||| ||    
T  36076 ttactaagtaataaagtgataagtagagtatcgtatccacatgaattgtcgtttcatccaaataattcgtgttacttattt--taagtttgacgataaaa 35979  T
Q  150 taaaaga---taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaatt 246  Q
    || ||||    |||||||||||| ||| ||||||||||| |||| |||| || ||  |||| || ||||||||||||||||||||||||||||||| |||    
T  35978 tataagagttaaagggttagagatttgcaatttttatctatttggaaca-aagaaagttacctgattttggttgcagaaaagtaagcagcggttaggatt 35880  T
Q  247 cttcgaat 254  Q
    ||| ||||    
T  35879 cttagaat 35872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 69; Significance: 5e-31; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 25 - 228
Target Start/End: Original strand, 54852 - 55056
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtc-ctttcgtccaaacaatttgcgtt 123  Q
    ||||||||| ||||||||||||| | |||||||||||||||||||||||||||| || ||||||| | ||||||||  ||||||| ||| |  |||||||    
T  54852 cggattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacagggattgtcgttttcgtctaaatagcttgcgtt 54951  T
Q  124 acttattttgtaagttgacgatata----ataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggtt 219  Q
    ||||||||  |||||| ||||||||    | ||||||||||||||||||| ||  ||||||||| ||||||| ||| | |||| |||| |||||||||||    
T  54952 acttattt--taagttaacgatataaaataaaaaagataagggttagaga-ttccaatttttatttgtttgcgacatagcaag-ttacctgtttttggtt 55047  T
Q  220 gcagaaaag 228  Q
    ||| |||||    
T  55048 gcacaaaag 55056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 48290 - 48162
Alignment:
Q  32 ggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-tt 130  Q
    ||||| |||| ||||| | |||||||||||||||||||||||||||| ||||||||  || ||||||||  |||||||||||||||  | ||||||| ||    
T  48290 ggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatc--tatggattgtcaattcgtccaaacaattctc-ttacttattt 48194  T
Q  131 ttgtaagttgacgatataataaaagataagggtta 165  Q
    |||||||||||||||    ||||||||||||||||    
T  48193 ttgtaagttgacgat---gtaaaagataagggtta 48162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 234362 - 234425
Alignment:
Q  54 ccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatt 117  Q
    |||||||||||||||||||||| || |||||| ||| |  |||||||||||||||| |||||||    
T  234362 ccaagtaataaagtgataagtatagtatcgtacccacagagattgtcctttcgtccgaacaatt 234425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 55 - 227
Target Start/End: Complemental strand, 43304 - 43132
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacgatat--aataa 152  Q
    ||||||||||||||||||||| || | |||||||| | |||||||| ||||||| |||||  | | |||||||||||  ||| ||||||||||  |||||    
T  43304 caagtaataaagtgataagtaaagtaacgtatccacaaggattgtcgtttcgtctaaacagctcgtgttacttattt--taaattgacgatataaaataa 43207  T
Q  153 a--agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaa 227  Q
    |  |||||||||||||||| ||| ||||||||||||||||||||||| |||| |||| ||||||||||| |||||||    
T  43206 aagagataagggttagaga-ttgcaatttttatctgtttgcaacagagcaag-ttacctgtttttggttacagaaaa 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 250
Target Start/End: Original strand, 35559 - 35754
Alignment:
Q  55 caagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaag-ttgacgatataataaa 153  Q
    |||||||||||||||||| ||||| || ||||||| | ||||| || |||||||||||||||| || ||||||||||  |||| |||| |||| ||||||    
T  35559 caagtaataaagtgataaatagagtattgtatccacatggattttcgtttcgtccaaacaattcgccttacttattt--taagtttgatgataaaataaa 35656  T
Q  154 aga---taagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttc 250  Q
    |||    |||||||||||| ||| ||||||||| ||| ||||||| | |||| |||| || ||||||||||||||| ||||||||||||||  |||||||    
T  35657 agagttaaagggttagagatttgcaatttttatttgtctgcaacaaagcaag-ttacctg-ttttggttgcagaaaggtaagcagcggttaagattcttc 35754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 254
Target Start/End: Complemental strand, 488 - 267
Alignment:
Q  33 gcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattt- 131  Q
    ||||||||| || || | |||| |||||||||||||||| |||||| |||||||| | | |||||||| ||||||||||||||||  |||||  |||||     
T  488 gcaagtgtatcatatcgtttacaaagtaataaagtgatacgtagagtatcgtatcaacagggattgtcatttcgtccaaacaattctcgttagatattta 389  T
Q  132 tgtaagttgacgatataataaaagat-aagggttagagag--ttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaag 228  Q
    | ||||||||||||   ||||||||| |||||||||| ||  ||| |||||||||||| |||||| ||| |||| | || |||||||||||  |||||      
T  388 tataagttgacgat---ataaaagataaagggttagaaagtcttgcaatttttatctgcttgcaatagagcaag-taacctgtttttggttttagaaata 293  T
Q  229 taagcagcggttagaattcttcgaat 254  Q
    |||||||| ||||| |||||||||||    
T  292 taagcagccgttaggattcttcgaat 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 3144 - 3238
Alignment:
Q  24 gcggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttg 119  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| || |||||| |||||||||| |||||||||| |||| |||||| ||||||    
T  3144 gcggattaggcaagtgtacaaaattgtttaccaagtaataaagtg-tatgtagagtatcgtatccacacggattgtcatttcatccaaaaaatttg 3238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 3281 - 3352
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggtta 241  Q
    ||||| ||||||||| |||||| || ||| ||| ||||| |||||||||||  ||||||||||||||||||||    
T  3281 agttgcaatttttatttgtttgtaatagagcaa-tttacctgtttttggttatagaaaagtaagcagcggtta 3352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 3749 - 3851
Alignment:
Q  148 aataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattc 247  Q
    ||||||| |||||||||||||||||| |||||||||||| | |||||| |  |||||||| | |||||| |||||||||||||||| |||||||| ||||    
T  3749 aataaaatataagggttagagagttgcaatttttatctgctcgcaacatagaaagtttacctatttttgtttgcagaaaagtaagctgcggttaggattc 3848  T
Q  248 ttc 250  Q
    |||    
T  3849 ttc 3851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 3533 - 3630
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    |||||||||||| ||| | |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| |||||||   ||||||||||||    
T  3533 caagtgtaccaa-ttgttaaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttt 3630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 12105 - 12207
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||| |  ||||||| |||| |||||||| ||||  | | |||| ||||| ||||||    
T  12105 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtattcatatggattgtcatttcaacaagacaacttgcgctactta 12204  T
Q  129 ttt 131  Q
    |||    
T  12205 ttt 12207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 567 - 651
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| ||||||||||||||||||||||| | | ||||| |||||| ||||||||||||||||||||||||||| |||||||||||    
T  567 agttgcaatttttatctgtttgcaacagagcgaatttacctgtttt-ggttgcagaaaagtaagcagcggttaggattcttcgaat 651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 482 - 526
Alignment:
Q  73 gtagagaatcgtatccatacggattgtcctttcgtccaaacaatt 117  Q
    |||||| |||||||||| | ||||||||||||||||| |||||||    
T  482 gtagagtatcgtatccacatggattgtcctttcgtccgaacaatt 526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 242
Target Start/End: Complemental strand, 89957 - 89744
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    ||||| |||||||| ||||| | |||||||||||||||||| ||||||||| ||| |||| | | | |||||| ||||||| |||||| | |||||||||    
T  89957 attagacaagtgtatcaaatcgtttaccaagtaataaagtg-taagtagagtatcatatctacaagtattgtcgtttcgtctaaacaactcgcgttactt 89859  T
Q  128 attttgtaa--gttgacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaa 225  Q
    |||||  ||  ||  |    |||| || || ||||||||||||| ||  ||||| |||||||||||||| ||||||| |||| || ||||||||||||||    
T  89858 attttaaaacagtaaagtgaataaaaagagttaagggttagagatttttaatttctatctgtttgcaaccgaacaag-ttacctg-ttttggttgcagaa 89761  T
Q  226 aagtaagcagcggttag 242  Q
    || ||||||||||||||    
T  89760 aaataagcagcggttag 89744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 2371 - 2470
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg 133  Q
    |||||||||||||| | ||||||| |||||||| ||||||||||| |||||||||| | |||||| | |||| ||||||||||| |||||| ||||||||    
T  2371 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattattttg 2470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 2402 - 2501
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg 133  Q
    |||||||||||||| | ||||||| |||||||| ||||||||||| |||||||||| | |||||| | |||| ||||||||||| |||||| ||||||||    
T  2402 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattattttg 2501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 6282 - 6385
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    |||||||||||||| ||||| | |||| |||||||||||| ||||||| || |||||||||| | |||||||  |||||||||||||||| || ||||||    
T  6282 attaggcaagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagtatcgtatccacatggattgttgtttcgtccaaacaattcgcattactt 6381  T
Q  128 attt 131  Q
    ||||    
T  6382 attt 6385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 15708 - 15867
Alignment:
Q  95 attgtcctttcgtccaaacaatttgcgttacttattttg-taagttgacgatataataaaagataag-ggttagagagt--tgaaatttttatctgtttg 190  Q
    |||||| ||||||||||||||||  |||||  ||||||  |||||||| |||||||   |||||||  ||||||| |||  || ||||||||||  ||||    
T  15708 attgtcatttcgtccaaacaattctcgttagatatttttataagttgatgatataa---aagataaacggttagaaagtcttgcaatttttatcaatttg 15804  T
Q  191 caacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||| |||||| || ||||||||||||| |||||||||||||||||||| |||||||||||    
T  15805 caacagagcaagtt-acctgtttttggttgcggaaaagtaagcagcggttagtattcttcgaat 15867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 254
Target Start/End: Original strand, 21299 - 21485
Alignment:
Q  56 aagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta-ttttgtaag-ttgacgatataataaa 153  Q
    ||||||||||||||||||||||| ||| |||||| | ||||||||||||||||| |||||||   ||||| || ||||||||| |||||| |   |||||    
T  21299 aagtaataaagtgataagtagagtatcatatccacagggattgtcctttcgtccgaacaattcttgttacatatttttgtaagtttgacggt---ataaa 21395  T
Q  154 agataagggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaa 253  Q
    || ||          ||||| ||||||||| |||||||||||||  |||||||| || |||||||| |||||||||||| |||| |||| ||||||||||    
T  21396 agtta----------agttgcaatttttatttgtttgcaacagaggaagtttacctg-ttttggtttcagaaaagtaagtagcgattaggattcttcgaa 21484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 25111 - 25191
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttc 250  Q
    ||||| ||||||| ||| ||||||||||| ||||||||| |||||| ||||||||||||||||||| ||||||| |||||||    
T  25111 agttgcaatttttctctatttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagcaacggttaggattcttc 25191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 72152 - 72231
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||||||| ||||||||| | ||||| |||||||||||||||||||  || || |||||||||||    
T  72152 aatttttatctgtttgcaacagagcaagtttacgtatttttagttgcagaaaagtaagcagtagtaaggattcttcgaat 72231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 72065 - 72117
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagag 78  Q
    ||||| || ||||||||||||||| | ||||||||||||||||||||||||||    
T  72065 ggatttggtaagtgtaccaaattgttaaccaagtaataaagtgataagtagag 72117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 6069 - 5983
Alignment:
Q  168 gagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||| ||||||||||||||||||| ||| | | |||||||||||||||||| ||||||||||| | |||| || |||||||||||    
T  6069 gagttgcaatttttatctgtttgcaatagagcgaatttacttgtttttggttgtagaaaagtaagtaacggtcaggattcttcgaat 5983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 6679 - 6593
Alignment:
Q  168 gagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    |||||| ||||||||||||||||||| |||   | ||||||||||||||||| || |||||||||||||||| || |||||||||||    
T  6679 gagttgcaatttttatctgtttgcaatagagtgaatttacttgtttttggtttcaaaaaagtaagcagcggtcaggattcttcgaat 6593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 1726 - 1790
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatcca 89  Q
    ||||||||| |||||||||||| || ||||||||||| |||||||||||||||| ||||||||||    
T  1726 cggattaggtaagtgtaccaaactgtttaccaagtaaaaaagtgataagtagagtatcgtatcca 1790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 78589 - 78692
Alignment:
Q  28 attaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactt 127  Q
    ||||||||||||||||| || | ||||||||||||||| ||||||||  || |||||||||||| |||||||| ||||  | || ||||  |||||||||    
T  78589 attaggcaagtgtaccatatcgtttaccaagtaataaactgataagttaagcatcgtatccataaggattgtcgtttcaacaaaccaatccgcgttactt 78688  T
Q  128 attt 131  Q
    ||||    
T  78689 attt 78692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 11236 - 11338
Alignment:
Q  29 ttaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttactta 128  Q
    |||| ||||||||| |||||| ||| ||| |||||||||||||||||||| ||| |||| | | |||||||  ||||  ||||||||||||| |||||||    
T  11236 ttagacaagtgtactaaattgtttatcaaataataaagtgataagtagagtatcatatctacatggattgttgtttcaaccaaacaatttgcattactta 11335  T
Q  129 ttt 131  Q
    |||    
T  11336 ttt 11338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 204
Target Start/End: Complemental strand, 181803 - 181633
Alignment:
Q  34 caagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttg 133  Q
    ||||||||||||||   |||||||||||||||||||||| | ||| |||||||||| |  ||||||| ||| ||||||| || | | ||||||||||||     
T  181803 caagtgtaccaaatcaattaccaagtaataaagtgataaat-gagtatcgtatccacatagattgtcgttttgtccaaataagtcgtgttacttatttta 181705  T
Q  134 taagttgacgatataat-aaaagataagggtt-agagagttgaaatttttatctgtttgcaacagaacaagtt 204  Q
    |   ||||||||  ||| ||||||||| |||| ||| | ||| ||| ||||| ||||||||||||| ||||||    
T  181704 t-gtttgacgatgaaataaaaagataaaggttaagatatttgcaatatttatttgtttgcaacagagcaagtt 181633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 4589 - 4484
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttac 125  Q
    ||||||||||| |||||| ||| | ||||||||||| ||| || |||| |||| |||||||||| | |||||||| ||||||  |||||||| | |||||    
T  4589 ggattaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttac 4490  T
Q  126 ttattt 131  Q
    ||||||    
T  4489 ttattt 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 29909 - 30005
Alignment:
Q  35 aagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    ||||||||||||| | |||||||||||||||||| ||||||||| || |||||||||  ||||||| | ||   |||||||||| |||||||||||||    
T  29909 aagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatggtatccatagagattgtcgtatctgtcaaacaatttacgttacttatttt 30005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 15572 - 15497
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgtatccatacggattgtc 100  Q
    ||||||||||||||||| |||||   ||||||||||||||||| ||| |||||| |||||||||| | ||||||||    
T  15572 cggattaggcaagtgtatcaaatcatttaccaagtaataaagtaatatgtagagtatcgtatccacatggattgtc 15497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 51115 - 51162
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataa 72  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  51115 cggattaggcaagtgaaccaaattgtttaccaagtaataaagtgataa 51162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 76540 - 76625
Alignment:
Q  169 agttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||| || |||||| ||||| ||||| | ||| ||||| |||||||||||| ||||||||||||| || |||| |||||||||||    
T  76540 agttgcaaattttatatgtttacaacatagcaaatttacctgtttttggttgtagaaaagtaagcaccgattaggattcttcgaat 76625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 76439 - 76517
Alignment:
Q  55 caagtaataaagtga-taagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttatttt 132  Q
    ||||||||||||| | ||||||||| ||| |||||| | ||||||| ||||||||| |||||||   ||||||||||||    
T  76439 caagtaataaagttagtaagtagagtatcatatccacagggattgttctttcgtccgaacaattcttgttacttatttt 76517  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 114618 - 114697
Alignment:
Q  161 ggttagagagttgaaatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttag 242  Q
    ||||||||| ||| ||||||||||||||||||||||| |||  |||| |||||||||||||||||||| || || |||||||    
T  114618 ggttagaga-ttgtaatttttatctgtttgcaacagaccaa-attacctgtttttggttgcagaaaaggaaacaacggttag 114697  T

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Target: scaffold0427 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 2881 - 2744
Alignment:
Q  69 ataagtagagaatcgtatccatacggattgtcctttcgtccaaacaatttgcgttacttattttgtaagttgacgat---ataataaaaga--taagggt 163  Q
    |||||| ||| |||||||||| | | |||||| |||||||||||||||| | ||||||||||||||   ||||| ||   |||||||||||  |||||||    
T  2881 ataagttgagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgtgttacttattttgt--tttgacaatataataataaaagagttaagggt 2784  T
Q  164 tagagagttgaaatttttatctgtttgcaacagaacaagtt 204  Q
    |||||| ||| ||||||||| | ||||||||| | ||||||    
T  2783 tagaga-ttgcaatttttatttatttgcaacatagcaagtt 2744  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 18851 - 18793
Alignment:
Q  26 ggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgt 84  Q
    |||||||||||||||||||||||  ||| ||||||||||| | |||||||||| |||||    
T  18851 ggattaggcaagtgtaccaaattatttatcaagtaataaaatcataagtagagtatcgt 18793  T

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Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 223135 - 223078
Alignment:
Q  27 gattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtagagaatcgt 84  Q
    |||||||||||||| |||||||  ||| ||||||||||| | |||||||||| |||||    
T  223135 gattaggcaagtgtgccaaattatttatcaagtaataaaatcataagtagagtatcgt 223078  T

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Target: scaffold0128 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 37465 - 37413
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagtaga 77  Q
    |||||||| ||| ||||| |||||| ||||||||||||||||||||| |||||    
T  37465 cggattagacaaatgtactaaattgtttaccaagtaataaagtgatatgtaga 37413  T

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Target: scaffold0351 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 5720 - 5642
Alignment:
Q  175 aatttttatctgtttgcaacagaacaagtttacttgtttttggttgcagaaaagtaagcagcggttagaattcttcgaat 254  Q
    ||||||||||||||||||| ||| ||| || || |||||||||||| ||||||| || || ||||||| |||||| ||||    
T  5720 aatttttatctgtttgcaatagaccaaatt-acctgtttttggttgtagaaaaggaaacaacggttaggattctttgaat 5642  T

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Target: scaffold0238 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 19103 - 19152
Alignment:
Q  25 cggattaggcaagtgtaccaaattgcttaccaagtaataaagtgataagta 75  Q
    ||||||||||||||||||||||||| ||  ||||||||||| |||||||||    
T  19103 cggattaggcaagtgtaccaaattg-ttttcaagtaataaaatgataagta 19152  T

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