View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13200_high_45 (Length: 227)
Name: NF13200_high_45
Description: NF13200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13200_high_45 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 26277195 - 26276975
Alignment:
| Q |
7 |
catataacatgggagactgcagagatcagaacctgatgagtaaatctgctacccttatcaaagcaactggacagcagattcacgccactagaattgtcca |
106 |
Q |
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| T |
26277195 |
catataacatgggagactgcagagatcagaacctgatgagtaaatctgctacccttatcaaagcaactggacagcagattcacgccactagaattgtcca |
26277096 |
T |
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| Q |
107 |
aatgttgggccacatctttcaaccaactccacaacatccctgtttccgggcagttcaggaagatatgatcagaggactccaattggcctttacagaagca |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26277095 |
aatgttgggccacatctttcaaccaactccacaacatccctgtttccgggcagttcaggaagatatgatcagaggactccaattggcctttacagaagca |
26276996 |
T |
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| Q |
207 |
gcacctagaaacaatcacgca |
227 |
Q |
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||||||||||||||||||||| |
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| T |
26276995 |
gcacctagaaacaatcacgca |
26276975 |
T |
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