View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13200_low_38 (Length: 251)
Name: NF13200_low_38
Description: NF13200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13200_low_38 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 3 - 251
Target Start/End: Original strand, 53639386 - 53639634
Alignment:
| Q |
3 |
ctgggtaaattatactgcaatagtaaaaataacaatacaatagaacgcttttggacattataaaaacaacttattttaattttatttgacaagtttcgtt |
102 |
Q |
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| T |
53639386 |
ctggttaaatttcactgcaatagaaaaaataacaatacaatagaacgctattggacattataaaaacaacttattttaattttatttgacaagtttcgtt |
53639485 |
T |
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| Q |
103 |
aagtgcaacataaaaatggacaaacagacacattaatgatcatctttttaccaatactatataatggatatagtctgtaatatttaactcacataaaaaa |
202 |
Q |
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| T |
53639486 |
aagtgcaacataaaaatggacaaacagacacattaatgatcatctttttaccaatactatataatggatatagtctgtaatatttaactcacataaaaaa |
53639585 |
T |
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| Q |
203 |
gtcaatactgtgtgtggattttgtaaaactactctcaatcattttttga |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53639586 |
gtcaatactgtgtgtggattttgtaaaactactctcaatcattttttga |
53639634 |
T |
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