View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13203_high_15 (Length: 370)
Name: NF13203_high_15
Description: NF13203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13203_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 32964903 - 32965162
Alignment:
| Q |
1 |
tcatcaaatctaatgtcaatggttgttaatatagtatagtagacctttatgttaatttgggattaacattgtaacaatagtatgagtttaatatgcacca |
100 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
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| T |
32964903 |
tcatcaaatctaatgtctatggttgttaatatagtatagtagacctttatgttaatttgggattaacattgtaacaatagcatgagtttaatatgtacca |
32965002 |
T |
|
| Q |
101 |
aatatatataggaggggcctaaaaaatgagatgaagtgcaaattatattttaaaaagacacaaaatatatacaagatgttttaaagaggattcaaatata |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
32965003 |
aatatatataggaggggtctaaaaaatgagatgaagtgcaaattatattttaaaaagacacaaa----atacaagatgttttaaagaggattcaaatata |
32965098 |
T |
|
| Q |
201 |
ttcaaagctattaattatcaatgaaaaatgttaatgagtgccttatagtattgtttataagtctaaaaaa |
270 |
Q |
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|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
32965099 |
ttcaaagctattaattattaatgaaaaatgttaatgagtgc------gtattgtttataagtctaaaaaa |
32965162 |
T |
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