View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13203_low_21 (Length: 293)
Name: NF13203_low_21
Description: NF13203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13203_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 55370696 - 55370959
Alignment:
| Q |
19 |
attattctctcatacttcaagctttaaaattcttagaccaattttgactcaaaaaccatcaacctagtatctgttcatgcattcatctctaaattctaat |
118 |
Q |
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| T |
55370696 |
attattctctcatacttcaagctttaaaattcttagaccacttttgactcaaaaaccatcaacctagtatctgttcatgcattcatctctaaattctaat |
55370795 |
T |
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| Q |
119 |
gatgagtttccatctaattatcacnnnnnnnnnnnnnccaatcttattactatcaataattcaactcatttacttattctccattctcacaaaatctcaa |
218 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55370796 |
gatgagtttccatctaattatcacaaaaaaacaaaaaccaatcttattactatcaataattcaactcatttacttattctccattctcacaaaatctcaa |
55370895 |
T |
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| Q |
219 |
tccaccctttgtagaacttcatgtggttccattccaatccaatatcctttttccattgatgatg |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55370896 |
tccaccctttgtagaacttcatgtggttccattccaatccaatatcctttttccattgatgatg |
55370959 |
T |
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