View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13204_high_13 (Length: 251)

Name: NF13204_high_13
Description: NF13204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13204_high_13
NF13204_high_13
[»] chr5 (35 HSPs)
chr5 (167-251)||(7543963-7544046)
chr5 (17-86)||(9856888-9856957)
chr5 (17-95)||(7544125-7544213)
chr5 (23-84)||(22023542-22023603)
chr5 (52-87)||(13634708-13634743)
chr5 (52-87)||(14245085-14245120)
chr5 (52-87)||(15986836-15986871)
chr5 (55-90)||(40305880-40305915)
chr5 (22-80)||(13839742-13839800)
chr5 (52-86)||(20147082-20147116)
chr5 (27-84)||(19177273-19177330)
chr5 (27-80)||(29002220-29002273)
chr5 (27-84)||(39965995-39966052)
chr5 (52-84)||(5688602-5688634)
chr5 (52-84)||(14245258-14245290)
chr5 (52-92)||(14681462-14681502)
chr5 (52-84)||(16938479-16938511)
chr5 (55-87)||(26414890-26414922)
chr5 (52-87)||(10204573-10204608)
chr5 (52-83)||(13634923-13634954)
chr5 (26-84)||(40305670-40305733)
chr5 (28-86)||(10072655-10072713)
chr5 (52-86)||(10476024-10476058)
chr5 (52-86)||(11436937-11436971)
chr5 (52-82)||(22022849-22022879)
chr5 (52-86)||(36392361-36392395)
chr5 (51-80)||(11756882-11756911)
chr5 (52-80)||(2550564-2550592)
chr5 (52-84)||(4373778-4373810)
chr5 (52-84)||(10476240-10476272)
chr5 (52-92)||(12035928-12035968)
chr5 (54-82)||(16502006-16502034)
chr5 (57-85)||(20513654-20513682)
chr5 (51-79)||(37551178-37551206)
chr5 (51-79)||(37654008-37654036)
[»] chr3 (28 HSPs)
chr3 (17-86)||(46556151-46556220)
chr3 (17-84)||(37102316-37102383)
chr3 (22-83)||(40858737-40858798)
chr3 (22-87)||(54985700-54985765)
chr3 (22-86)||(37102157-37102221)
chr3 (17-87)||(651737-651808)
chr3 (25-84)||(34641002-34641061)
chr3 (17-87)||(2387927-2387997)
chr3 (22-84)||(30200098-30200160)
chr3 (22-86)||(220406-220469)
chr3 (25-84)||(48683788-48683848)
chr3 (25-84)||(40858575-40858634)
chr3 (17-86)||(9312641-9312715)
chr3 (54-87)||(24253718-24253751)
chr3 (26-83)||(49815433-49815490)
chr3 (25-84)||(21773957-21774016)
chr3 (52-87)||(24560214-24560249)
chr3 (52-87)||(34641202-34641237)
chr3 (33-84)||(41414262-41414313)
chr3 (52-87)||(44412358-44412393)
chr3 (25-80)||(46978441-46978496)
chr3 (25-87)||(48683619-48683681)
chr3 (22-83)||(25179905-25179966)
chr3 (22-59)||(34641162-34641199)
chr3 (19-59)||(220566-220606)
chr3 (52-84)||(24560429-24560461)
chr3 (52-84)||(54574568-54574600)
chr3 (52-80)||(55428591-55428619)
[»] chr6 (18 HSPs)
chr6 (23-90)||(21606848-21606915)
chr6 (17-84)||(1300629-1300696)
chr6 (22-84)||(5381198-5381260)
chr6 (52-87)||(4097232-4097267)
chr6 (52-87)||(14515470-14515505)
chr6 (52-86)||(10818227-10818261)
chr6 (52-84)||(15323225-15323257)
chr6 (52-84)||(15353364-15353396)
chr6 (22-89)||(31849282-31849349)
chr6 (52-86)||(9051744-9051778)
chr6 (52-86)||(9719029-9719063)
chr6 (52-86)||(9721136-9721170)
chr6 (52-86)||(23090993-23091027)
chr6 (52-86)||(30487304-30487338)
chr6 (52-81)||(21607056-21607085)
chr6 (55-84)||(31798918-31798947)
chr6 (52-84)||(12811192-12811224)
chr6 (52-84)||(14515683-14515715)
[»] chr4 (36 HSPs)
chr4 (17-84)||(41174356-41174422)
chr4 (27-84)||(56135908-56135965)
chr4 (25-87)||(55080754-55080816)
chr4 (25-90)||(34110979-34111044)
chr4 (27-84)||(43961587-43961644)
chr4 (52-89)||(49735463-49735500)
chr4 (17-86)||(1968526-1968605)
chr4 (27-83)||(41227494-41227550)
chr4 (52-88)||(56135745-56135781)
chr4 (27-86)||(22921134-22921193)
chr4 (27-86)||(22970606-22970665)
chr4 (52-86)||(37711136-37711170)
chr4 (52-86)||(54935065-54935099)
chr4 (27-84)||(4437601-4437658)
chr4 (52-84)||(26166937-26166969)
chr4 (27-87)||(35543314-35543374)
chr4 (52-84)||(45741890-45741922)
chr4 (26-78)||(46007715-46007767)
chr4 (52-84)||(49735704-49735736)
chr4 (54-86)||(54320433-54320465)
chr4 (52-84)||(54320646-54320678)
chr4 (22-81)||(22186891-22186950)
chr4 (52-87)||(31348533-31348568)
chr4 (52-87)||(51329793-51329828)
chr4 (56-90)||(5825112-5825146)
chr4 (52-86)||(7977709-7977743)
chr4 (23-84)||(27775583-27775649)
chr4 (52-86)||(29798286-29798320)
chr4 (52-86)||(41174557-41174591)
chr4 (52-86)||(53260716-53260750)
chr4 (52-81)||(46007913-46007942)
chr4 (22-86)||(47433716-47433781)
chr4 (28-84)||(2916969-2917025)
chr4 (52-84)||(17182697-17182729)
chr4 (52-84)||(37711335-37711367)
chr4 (52-84)||(54935281-54935313)
[»] chr2 (26 HSPs)
chr2 (17-84)||(23748105-23748172)
chr2 (22-83)||(39821841-39821902)
chr2 (17-92)||(12541762-12541842)
chr2 (25-78)||(14196844-14196897)
chr2 (17-80)||(9592002-9592065)
chr2 (22-84)||(1583249-1583311)
chr2 (52-86)||(17380053-17380087)
chr2 (17-86)||(19566988-19567062)
chr2 (17-84)||(36347708-36347785)
chr2 (52-84)||(17379846-17379878)
chr2 (52-84)||(35736175-35736207)
chr2 (52-86)||(23748307-23748341)
chr2 (52-86)||(31061357-31061391)
chr2 (25-87)||(39732736-39732798)
chr2 (54-84)||(40022363-40022393)
chr2 (52-86)||(45257305-45257339)
chr2 (17-82)||(7681260-7681325)
chr2 (27-76)||(14187092-14187141)
chr2 (52-81)||(36567064-36567093)
chr2 (54-87)||(41778770-41778803)
chr2 (23-59)||(887283-887319)
chr2 (52-96)||(9426973-9427017)
chr2 (54-86)||(9631774-9631806)
chr2 (52-84)||(22356216-22356248)
chr2 (55-87)||(35736402-35736434)
chr2 (52-84)||(42296515-42296547)
[»] chr8 (32 HSPs)
chr8 (17-86)||(16652956-16653026)
chr8 (17-86)||(37032388-37032456)
chr8 (22-86)||(9718487-9718551)
chr8 (17-83)||(11785537-11785603)
chr8 (52-87)||(12022355-12022390)
chr8 (25-84)||(39449314-39449373)
chr8 (52-87)||(43732676-43732711)
chr8 (22-80)||(1026863-1026921)
chr8 (26-84)||(20472702-20472760)
chr8 (55-92)||(6315058-6315095)
chr8 (53-86)||(8815354-8815387)
chr8 (26-86)||(7502962-7503022)
chr8 (17-84)||(33922525-33922597)
chr8 (26-82)||(35694742-35694798)
chr8 (17-59)||(7979175-7979217)
chr8 (52-86)||(41103502-41103536)
chr8 (52-85)||(7394673-7394706)
chr8 (55-84)||(9718694-9718723)
chr8 (55-84)||(30365130-30365159)
chr8 (22-59)||(30581985-30582022)
chr8 (27-76)||(44114250-44114299)
chr8 (52-84)||(2248452-2248484)
chr8 (52-84)||(3726863-3726895)
chr8 (52-84)||(4247732-4247764)
chr8 (52-84)||(8815141-8815173)
chr8 (54-86)||(9434513-9434545)
chr8 (52-84)||(13404976-13405008)
chr8 (52-84)||(31543284-31543316)
chr8 (52-84)||(31738635-31738667)
chr8 (56-84)||(37032596-37032624)
chr8 (52-88)||(40633200-40633236)
chr8 (52-84)||(43732899-43732931)
[»] chr7 (40 HSPs)
chr7 (17-87)||(37417800-37417870)
chr7 (23-84)||(17852881-17852942)
chr7 (25-86)||(17853045-17853106)
chr7 (26-84)||(23116269-23116327)
chr7 (17-86)||(42306342-42306411)
chr7 (29-86)||(48013682-48013739)
chr7 (52-92)||(37925833-37925873)
chr7 (52-87)||(1051710-1051745)
chr7 (17-84)||(10315623-10315690)
chr7 (27-78)||(37561838-37561889)
chr7 (22-80)||(39646641-39646699)
chr7 (52-86)||(39856077-39856111)
chr7 (17-87)||(40196699-40196768)
chr7 (52-86)||(48881761-48881795)
chr7 (52-92)||(33519260-33519300)
chr7 (52-84)||(36267765-36267797)
chr7 (52-87)||(28074100-28074135)
chr7 (52-83)||(31571682-31571713)
chr7 (23-82)||(40572247-40572306)
chr7 (25-84)||(48094068-48094127)
chr7 (21-87)||(1013931-1013997)
chr7 (52-86)||(13425118-13425152)
chr7 (52-86)||(13771158-13771192)
chr7 (52-90)||(41496951-41496989)
chr7 (17-59)||(41497124-41497166)
chr7 (22-59)||(31364080-31364117)
chr7 (52-81)||(31364256-31364285)
chr7 (17-58)||(31571637-31571678)
chr7 (52-81)||(33655320-33655349)
chr7 (52-81)||(42306542-42306571)
chr7 (52-84)||(13770948-13770980)
chr7 (54-82)||(24970379-24970407)
chr7 (52-84)||(25887192-25887224)
chr7 (53-81)||(26365770-26365798)
chr7 (56-84)||(28074324-28074352)
chr7 (52-84)||(36267553-36267585)
chr7 (23-59)||(36267588-36267624)
chr7 (52-84)||(40282197-40282229)
chr7 (52-84)||(47390855-47390887)
chr7 (52-84)||(48881558-48881590)
[»] chr1 (28 HSPs)
chr1 (17-84)||(8529809-8529876)
chr1 (17-80)||(50744448-50744511)
chr1 (23-84)||(26941016-26941077)
chr1 (17-86)||(12234008-12234087)
chr1 (22-85)||(1344720-1344783)
chr1 (51-88)||(51303380-51303417)
chr1 (27-82)||(33643445-33643499)
chr1 (19-82)||(40287427-40287490)
chr1 (52-91)||(41498397-41498436)
chr1 (27-81)||(2470912-2470966)
chr1 (52-85)||(26324013-26324046)
chr1 (52-84)||(30010332-30010364)
chr1 (22-86)||(47071223-47071287)
chr1 (53-92)||(1085481-1085520)
chr1 (52-86)||(20607429-20607463)
chr1 (52-86)||(35927812-35927846)
chr1 (17-59)||(51597703-51597745)
chr1 (22-87)||(525109-525173)
chr1 (18-59)||(32951486-32951527)
chr1 (52-84)||(525312-525344)
chr1 (52-84)||(1085702-1085734)
chr1 (52-84)||(2470730-2470762)
chr1 (52-84)||(20607223-20607255)
chr1 (52-84)||(38509894-38509926)
chr1 (52-88)||(38510106-38510142)
chr1 (52-84)||(40094933-40094965)
chr1 (59-87)||(40095153-40095181)
chr1 (28-84)||(49832722-49832778)
[»] scaffold0012 (1 HSPs)
scaffold0012 (17-84)||(184611-184678)
[»] scaffold0096 (1 HSPs)
scaffold0096 (25-85)||(6758-6818)
[»] scaffold0095 (1 HSPs)
scaffold0095 (25-84)||(8157-8216)
[»] scaffold0026 (2 HSPs)
scaffold0026 (19-58)||(1208-1247)
scaffold0026 (52-81)||(1175-1204)
[»] scaffold0071 (1 HSPs)
scaffold0071 (26-84)||(52896-52954)
[»] scaffold0067 (2 HSPs)
scaffold0067 (19-86)||(39359-39436)
scaffold0067 (52-84)||(39186-39218)


Alignment Details
Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 7544046 - 7543963
Alignment:
Q  167 tgagtggcagttgagatgtttcgtctatatacggcgcatgtgtatcttcttgcttagcctaatatatgggttgtcttgtacgggt 251  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||| |||||||    
T  7544046 tgagtggcagttgagatgtttcgtctatatacagcgc-tgtgtatcttcttgcttagcctaatatatgtgttgtcttctacgggt 7543963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 9856957 - 9856888
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  9856957 atatagtccttaatttaaaaaagaaaactaaactctcccctcctaaaccctcaatccaaacacaccctta 9856888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 7544213 - 7544125
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcc----------taaaccctcaatccaaacacacccttagggtttagg 95  Q
    ||||||||||||||||||||||||||||| ||| |||||||||          ||||||||||||||||||||||||||||||||||||    
T  7544213 atatagtccgtaatttaaaaaagaaaatttagccctcccctcccttcccttcctaaaccctcaatccaaacacacccttagggtttagg 7544125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 22023542 - 22023603
Alignment:
Q  23 tccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||| ||| ||||| ||| | |||||||||||||||||| |||||||||||||||    
T  22023542 tccgtaatttataaatgaaaagtaaaccctcccctcctaaaccctccatccaaacacaccct 22023603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 13634743 - 13634708
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||||||||||||||||||||||||||    
T  13634743 tcccctcctaaaccctcaatccaaacacacccttag 13634708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 14245120 - 14245085
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||||||||||||||||||||||||||    
T  14245120 tcccctcctaaaccctcaatccaaacacacccttag 14245085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 15986836 - 15986871
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||||||||||||||||||||||||||    
T  15986836 tcccctcctaaaccctcaatccaaacacacccttag 15986871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 40305880 - 40305915
Alignment:
Q  55 cctcctaaaccctcaatccaaacacacccttagggt 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  40305880 cctcctaaaccctcaatccaaacacacccttagggt 40305915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 13839800 - 13839742
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacaca 80  Q
    |||| ||||||||||||||||| |||||||||| ||||| |||||||  ||||||||||    
T  13839800 gtccataatttaaaaaagaaaagtaagctctcctctcctcaaccctccgtccaaacaca 13839742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 20147082 - 20147116
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||||||||||||||||||||||    
T  20147082 tcccctcctaaaccctcaatccaaacacaccctta 20147116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 19177273 - 19177330
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||| |||||||||| ||| | ||||||||| |||||||||||||||||| |||||    
T  19177273 taatttgaaaaagaaaactaaaccctcccctccaaaaccctcaatccaaacataccct 19177330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 29002273 - 29002220
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacaca 80  Q
    ||||||||||| ||||| ||| | |||||||||||||||||| |||||||||||    
T  29002273 taatttaaaaatgaaaagtaaaccctcccctcctaaaccctccatccaaacaca 29002220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 39966052 - 39965995
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||  |||| ||| |||||||||||||||||||| ||| |||||||||||    
T  39966052 taatttaaaaataaaaagtaaactctcccctcctaaaccctctatctaaacacaccct 39965995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 5688602 - 5688634
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||||||    
T  5688602 tcccctcctaaaccctcaatccaaacacaccct 5688634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 14245258 - 14245290
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||||||    
T  14245258 tcccctcctaaaccctcaatccaaacacaccct 14245290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 14681502 - 14681462
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttagggttt 92  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  14681502 tcccctcctaaaccctcaatccaaacacacacttaaggttt 14681462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 16938511 - 16938479
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||||||    
T  16938511 tcccctcctaaaccctcaatccaaacacaccct 16938479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 26414922 - 26414890
Alignment:
Q  55 cctcctaaaccctcaatccaaacacacccttag 87  Q
    |||||||||||||||||||||||||||||||||    
T  26414922 cctcctaaaccctcaatccaaacacacccttag 26414890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 10204608 - 10204573
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||||||| ||||||||||||||||||    
T  10204608 tcccctcctaaaccctcgatccaaacacacccttag 10204573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 83
Target Start/End: Original strand, 13634923 - 13634954
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccc 83  Q
    ||||||||||||||||||||||||||||||||    
T  13634923 tcccctcctaaaccctcaatccaaacacaccc 13634954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 40305733 - 40305670
Alignment:
Q  26 gtaatttaaaaaagaaaattaagctc-----tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||| ||||| |     ||||||||||||||||| |||||||||||||||    
T  40305733 gtaatttaaaaaagaaaactaagccctcccttcccctcctaaaccctccatccaaacacaccct 40305670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 10072713 - 10072655
Alignment:
Q  28 aatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||| | ||||| ||| | |||||||| ||||||||| |||||||||||||||||    
T  10072713 aatttaaatatgaaaagtaaaccctcccctcttaaaccctccatccaaacacaccctta 10072655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 10476058 - 10476024
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||||||| ||||||||||||||    
T  10476058 tcccctcctaaaccctcaattcaaacacaccctta 10476024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 11436971 - 11436937
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||||||||||||||| ||||||    
T  11436971 tcccctcctaaaccctcaatccaaacacgccctta 11436937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 82
Target Start/End: Complemental strand, 22022879 - 22022849
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacc 82  Q
    |||||||||||||||||||||||||||||||    
T  22022879 tcccctcctaaaccctcaatccaaacacacc 22022849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 36392361 - 36392395
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||||||||||||||| ||||||    
T  36392361 tcccctcctaaaccctcaatccaaacacgccctta 36392395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 80
Target Start/End: Complemental strand, 11756911 - 11756882
Alignment:
Q  51 ctcccctcctaaaccctcaatccaaacaca 80  Q
    ||||||||||||||||||||||||||||||    
T  11756911 ctcccctcctaaaccctcaatccaaacaca 11756882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 80
Target Start/End: Original strand, 2550564 - 2550592
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacaca 80  Q
    |||||||||||||||||||||||||||||    
T  2550564 tcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 4373778 - 4373810
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||| ||||||||||||||||||||||||||||    
T  4373778 tcccttcctaaaccctcaatccaaacacaccct 4373810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 10476240 - 10476272
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  10476240 tcccctcctaaaccctccatccaaacacaccct 10476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 12035968 - 12035928
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttagggttt 92  Q
    |||||||||||||| || ||||||||||||||||| |||||    
T  12035968 tcccctcctaaaccatctatccaaacacacccttaaggttt 12035928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 82
Target Start/End: Original strand, 16502006 - 16502034
Alignment:
Q  54 ccctcctaaaccctcaatccaaacacacc 82  Q
    |||||||||||||||||||||||||||||    
T  16502006 ccctcctaaaccctcaatccaaacacacc 16502034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 85
Target Start/End: Original strand, 20513654 - 20513682
Alignment:
Q  57 tcctaaaccctcaatccaaacacaccctt 85  Q
    |||||||||||||||||||||||||||||    
T  20513654 tcctaaaccctcaatccaaacacaccctt 20513682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 79
Target Start/End: Complemental strand, 37551206 - 37551178
Alignment:
Q  51 ctcccctcctaaaccctcaatccaaacac 79  Q
    |||||||||||||||||||||||||||||    
T  37551206 ctcccctcctaaaccctcaatccaaacac 37551178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 79
Target Start/End: Complemental strand, 37654036 - 37654008
Alignment:
Q  51 ctcccctcctaaaccctcaatccaaacac 79  Q
    |||||||||||||||||||||||||||||    
T  37654036 ctcccctcctaaaccctcaatccaaacac 37654008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 46556220 - 46556151
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||    
T  46556220 atatagtctgtaatttaaaaaagaaaattaaactctcccctcctaaaccctcaatccaaacgtaccctta 46556151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 37102316 - 37102383
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||| || ||| |  |||||||||||||||||||||||||||||||||    
T  37102316 atatagtccgtaatttaaaaaagataagtaaaccttcccctcctaaaccctcaatccaaacacaccct 37102383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 40858737 - 40858798
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccc 83  Q
    |||||||||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||    
T  40858737 gtccgtaatttaaaaaagaaaactaaaccctcccctcctaaaccctccatccaaacacaccc 40858798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 54985765 - 54985700
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacccttag 87  Q
    |||||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||||||| |||||    
T  54985765 gtccgtaatttaaaaacgaaaactaagctctctccttctaaaccctcaatccaaacacactcttag 54985700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 37102221 - 37102157
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||| ||||| ||| | |||||||||||||||||| |||||||||||||||||    
T  37102221 gtccgtaatttaaaaatgaaaactaaaccctcccctcctaaaccctccatccaaacacaccctta 37102157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 651808 - 651737
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccc-tcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||  ||||||||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||    
T  651808 atatagtctataatttaaaaaagaaaagtaaaccctccccctcctaaaccctcaatccaaacacacccttag 651737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 34641061 - 34641002
Alignment:
Q  25 cgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||| |||| | ||| ||||||||||||||||||||||||||||||||||    
T  34641061 cgtaatttaaaaaataaaagtgagccctcccctcctaaaccctcaatccaaacacaccct 34641002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 2387927 - 2387997
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacccttag 87  Q
    |||||| |||| ||||| ||||||||| ||| | ||||||||| |||||||||||||||||||||||||||    
T  2387927 atatagaccgtgatttagaaaagaaaagtaaaccctcccctcccaaaccctcaatccaaacacacccttag 2387997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 30200160 - 30200098
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||| ||||| ||| | |||||||||||||||||| |||||||||||||||    
T  30200160 gtccgtaatttaaaaatgaaaactaaaccctcccctcctaaaccctccatccaaacacaccct 30200098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 220469 - 220406
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||| ||||| ||| | |||||||||||||||||| ||||||| |||||||||    
T  220469 gtccgtaatttaaaaatgaaaactaaac-ctcccctcctaaaccctccatccaaatacaccctta 220406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 48683788 - 48683848
Alignment:
Q  25 cgtaatttaaaaaagaaaat-taagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||  ||| | |||||||||||||||||| |||||||||||||||    
T  48683788 cgtaatttaaaaaagaaaaaataaaccctcccctcctaaaccctctatccaaacacaccct 48683848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 40858634 - 40858575
Alignment:
Q  25 cgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||| |||| | ||| ||||| ||||| ||||||||||||||||||||||    
T  40858634 cgtaatttaaaaaataaaagtgagccctcccatcctagaccctcaatccaaacacaccct 40858575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 9312641 - 9312715
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaa-----gctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||| ||||||||||||||||||| ||      | ||||||||||||||||||||||||||||| ||||||    
T  9312641 atatagtcggtaatttaaaaaagaaaatcaaaccctcccctcccctcctaaaccctcaatccaaacactccctta 9312715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 24253751 - 24253718
Alignment:
Q  54 ccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||||||||||||||||||||||||    
T  24253751 ccctcctaaaccctcaatccaaacacacccttag 24253718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 49815490 - 49815433
Alignment:
Q  26 gtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccc 83  Q
    |||||||||||||||||| ||||| ||||||||| |||||||| |||| |||| ||||    
T  49815490 gtaatttaaaaaagaaaagtaagccctcccctccaaaaccctccatcccaacataccc 49815433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 21773957 - 21774016
Alignment:
Q  25 cgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||  |||| ||| | |||||||||||||||||  |||||||||||||||    
T  21773957 cgtaatttaaaaataaaaagtaaaccctcccctcctaaacccttcatccaaacacaccct 21774016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 24560249 - 24560214
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    |||||||||||||||| |||||||||||||||||||    
T  24560249 tcccctcctaaacccttaatccaaacacacccttag 24560214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 34641202 - 34641237
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||||||| ||||||||||||||||||    
T  34641202 tcccctcctaaaccctccatccaaacacacccttag 34641237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 41414262 - 41414313
Alignment:
Q  33 aaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||| ||| | |||||||||||||||| | |||||||||||||||    
T  41414262 aaaaaagaaaagtaaacactcccctcctaaacccaccatccaaacacaccct 41414313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 44412393 - 44412358
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    |||||||||||||||||||| |||||||||||||||    
T  44412393 tcccctcctaaaccctcaattcaaacacacccttag 44412358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 46978496 - 46978441
Alignment:
Q  25 cgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacaca 80  Q
    |||||||||||||  |||| | | | ||||||||||||||||||||||||||||||    
T  46978496 cgtaatttaaaaattaaaagtgaaccctcccctcctaaaccctcaatccaaacaca 46978441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 48683681 - 48683619
Alignment:
Q  25 cgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacccttag 87  Q
    |||||||||| ||| |||| | ||  ||||||||||| ||||||||||||||||||| |||||    
T  48683681 cgtaatttaagaaataaaagtgagtcctcccctcctagaccctcaatccaaacacactcttag 48683619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 25179966 - 25179905
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccc 83  Q
    |||| ||||||||||| ||||| ||||  ||||||||| || ||||||||||||||| ||||    
T  25179966 gtccataatttaaaaatgaaaagtaagtcctcccctccaaagccctcaatccaaacaaaccc 25179905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 34641162 - 34641199
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcc 59  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  34641162 gtccgtaatttaaaaaagaaaagtaagccctcccctcc 34641199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 220566 - 220606
Alignment:
Q  19 atagtccgtaatttaaaaaagaaaattaagctctcccctcc 59  Q
    ||||||||||||||||||||||||| |||  ||||||||||    
T  220566 atagtccgtaatttaaaaaagaaaagtaaattctcccctcc 220606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 24560429 - 24560461
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  24560429 tcccctcctaaaccctccatccaaacacaccct 24560461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 54574568 - 54574600
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||| ||||||||||||||||||||||||||||    
T  54574568 tcccttcctaaaccctcaatccaaacacaccct 54574600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 80
Target Start/End: Original strand, 55428591 - 55428619
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacaca 80  Q
    |||||||||||||||||||||||||||||    
T  55428591 tcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 21606915 - 21606848
Alignment:
Q  23 tccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacccttagggt 90  Q
    ||||||||||||||| ||||| ||| | |||||||||||||||||| |||||||||||||||||||||    
T  21606915 tccgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccctccatccaaacacacccttagggt 21606848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 1300696 - 1300629
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||| |||||||||||||||   ||| ||| | ||||||||||||||||||||||||||||||||||    
T  1300696 atataatccgtaatttaaaaacataaagtaaaccctcccctcctaaaccctcaatccaaacacaccct 1300629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 5381260 - 5381198
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||| | || | ||||||| ||| |||||||||||||||    
T  5381260 gtccgtaatttaaaaaagaaaattaagcccacctcacctaaacactctatccaaacacaccct 5381198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 4097267 - 4097232
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||||||||||||||||||||||||||    
T  4097267 tcccctcctaaaccctcaatccaaacacacccttag 4097232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 14515505 - 14515470
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||||||||||||||||||||||||||    
T  14515505 tcccctcctaaaccctcaatccaaacacacccttag 14515470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 10818261 - 10818227
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||||||||||||||||||||||    
T  10818261 tcccctcctaaaccctcaatccaaacacaccctta 10818227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 15323257 - 15323225
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||||||    
T  15323257 tcccctcctaaaccctcaatccaaacacaccct 15323225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 15353396 - 15353364
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||||||    
T  15353396 tcccctcctaaaccctcaatccaaacacaccct 15353364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 31849282 - 31849349
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacccttaggg 89  Q
    |||||||||||||||| ||||| | | | |||||||||| ||| ||| ||| ||||||||||||||||    
T  31849282 gtccgtaatttaaaaatgaaaagtgaaccctcccctcctgaactctccatctaaacacacccttaggg 31849349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 9051744 - 9051778
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||| |||||||||||||||||||||||||||    
T  9051744 tcccctcttaaaccctcaatccaaacacaccctta 9051778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 9719063 - 9719029
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||||||||||||||||| ||||    
T  9719063 tcccctcctaaaccctcaatccaaacacacgctta 9719029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 9721170 - 9721136
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||| ||||||||||||||||||||    
T  9721170 tcccctcctaaaccttcaatccaaacacaccctta 9721136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 23091027 - 23090993
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||| ||||||||||||||||||||    
T  23091027 tcccctcctaaaccttcaatccaaacacaccctta 23090993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 30487338 - 30487304
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||||| |||||||||||||||||    
T  30487338 tcccctcctaaaccctccatccaaacacaccctta 30487304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 81
Target Start/End: Original strand, 21607056 - 21607085
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacac 81  Q
    ||||||||||||||||||||||||||||||    
T  21607056 tcccctcctaaaccctcaatccaaacacac 21607085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 84
Target Start/End: Complemental strand, 31798947 - 31798918
Alignment:
Q  55 cctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||||||||||||||||    
T  31798947 cctcctaaaccctcaatccaaacacaccct 31798918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 12811192 - 12811224
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||| ||||||||||||||||||||||||||||    
T  12811192 tcccatcctaaaccctcaatccaaacacaccct 12811224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 14515683 - 14515715
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  14515683 tcccctcctaaaccctccatccaaacacaccct 14515715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 41174422 - 41174356
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||| |||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  41174422 atatagtccctaatttaaaaaagaaa-ttaagccatcccctcctaaaccctcaatccaaacacaccct 41174356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 56135908 - 56135965
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||    
T  56135908 taatttaaaaaagaaaagtaagccctcccctcctaaaccctccatccaaacacaccct 56135965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 55080754 - 55080816
Alignment:
Q  25 cgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||||||||| ||||  ||||| |||||||||||| ||||||||||||||||||    
T  55080754 cgtaatttaaaaaagaaaagtaagtcctcccatcctaaaccctccatccaaacacacccttag 55080816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 34110979 - 34111044
Alignment:
Q  25 cgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacccttagggt 90  Q
    |||||||||||||  |||| ||| | |||||||||||||||||| ||| |||||||||||||||||    
T  34110979 cgtaatttaaaaataaaaagtaaaccctcccctcctaaaccctccatctaaacacacccttagggt 34111044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 43961587 - 43961644
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| ||||| |||||||| ||| ||||| |||||||||||||||    
T  43961587 taatttaaaaaagaaaaataagccctcccctcataatccctccatccaaacacaccct 43961644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 49735500 - 49735463
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttaggg 89  Q
    ||||||||||||||||||||||||||||||||||||||    
T  49735500 tcccctcctaaaccctcaatccaaacacacccttaggg 49735463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 1968526 - 1968605
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctct----------cccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||||||||| ||||||||| ||||          ||||||||||||||||||||||||||||||||||    
T  1968526 atatagtccgtaatttaaaaatgaaaattaaactcttccctcccttcccctcctaaaccctcaatccaaacacaccctta 1968605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 41227550 - 41227494
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccc 83  Q
    |||||||||||||| || ||||| || ||||||||||||||| ||||||||||||||    
T  41227550 taatttaaaaaagagaagtaagccctgccctcctaaaccctccatccaaacacaccc 41227494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 56135781 - 56135745
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttagg 88  Q
    |||||||||||||||||||||||||||||||||||||    
T  56135781 tcccctcctaaaccctcaatccaaacacacccttagg 56135745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 22921134 - 22921193
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||| |||||| || |||||||||| ||||| ||||||||||||| |||||||    
T  22921134 taatttaaaaatgaaaatcaaactctcccctcttaaactctcaatccaaacaaaccctta 22921193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 22970665 - 22970606
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||| |||||| || |||||||||| ||||| ||||||||||||| |||||||    
T  22970665 taatttaaaaatgaaaatcaaactctcccctcttaaactctcaatccaaacaaaccctta 22970606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 37711170 - 37711136
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||||||||||||||||||||||    
T  37711170 tcccctcctaaaccctcaatccaaacacaccctta 37711136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 54935099 - 54935065
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||||||||||||||||||||||    
T  54935099 tcccctcctaaaccctcaatccaaacacaccctta 54935065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 4437601 - 4437658
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||| |||| | | | ||||||||||||||| ||||||||||||||||||    
T  4437601 taatttaaaaaataaaaatgaaccctcccctcctaaaccttcaatccaaacacaccct 4437658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 26166969 - 26166937
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||||||    
T  26166969 tcccctcctaaaccctcaatccaaacacaccct 26166937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 35543374 - 35543314
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||||||| |||| |||||| || ||||||||| ||| |||||||| |||||    
T  35543374 taatttaaaaaagaaaaataagttctcccttcttaaaccctccatctaaacacactcttag 35543314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 45741922 - 45741890
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||||||    
T  45741922 tcccctcctaaaccctcaatccaaacacaccct 45741890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 46007767 - 46007715
Alignment:
Q  26 gtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaaca 78  Q
    |||||||||||| ||||| ||| | |||||||||||||||||| |||||||||    
T  46007767 gtaatttaaaaatgaaaagtaaaccctcccctcctaaaccctccatccaaaca 46007715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 49735704 - 49735736
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||||||    
T  49735704 tcccctcctaaaccctcaatccaaacacaccct 49735736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 54320465 - 54320433
Alignment:
Q  54 ccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||||||||||||||||||||    
T  54320465 ccctcctaaaccctcaatccaaacacaccctta 54320433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 54320646 - 54320678
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||||||    
T  54320646 tcccctcctaaaccctcaatccaaacacaccct 54320678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 22186891 - 22186950
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacac 81  Q
    |||||||||||||||||||||| | ||  |||||||  ||||||||| ||||||||||||    
T  22186891 gtccgtaatttaaaaaagaaaagtgagtcctccccttttaaaccctccatccaaacacac 22186950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 31348533 - 31348568
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||| ||||||||||||||||||||||    
T  31348533 tcccctcctaaactctcaatccaaacacacccttag 31348568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 51329828 - 51329793
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||| ||||||||||||||||||||||    
T  51329828 tcccctcctaaactctcaatccaaacacacccttag 51329793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 90
Target Start/End: Original strand, 5825112 - 5825146
Alignment:
Q  56 ctcctaaaccctcaatccaaacacacccttagggt 90  Q
    ||||||||||||| |||||||||||||||||||||    
T  5825112 ctcctaaaccctccatccaaacacacccttagggt 5825146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 7977709 - 7977743
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||| |||||||||||||||||||||||||||    
T  7977709 tcccctcataaaccctcaatccaaacacaccctta 7977743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 27775649 - 27775583
Alignment:
Q  23 tccgtaatttaaaaaagaaaattaagctct-----cccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||| ||||||||| ||||| ||     |||||||||||||||||||||||||| |||||    
T  27775649 tccgtaatttagaaaagaaaagtaagccctttcttcccctcctaaaccctcaatccaaacaaaccct 27775583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 29798320 - 29798286
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||| ||||||||||||||||||||    
T  29798320 tcccctcctaaaccatcaatccaaacacaccctta 29798286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 41174557 - 41174591
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||||| |||||||||||||||||    
T  41174557 tcccctcctaaaccctccatccaaacacaccctta 41174591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 53260750 - 53260716
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||||| |||||||||||||||||    
T  53260750 tcccctcctaaaccctccatccaaacacaccctta 53260716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 81
Target Start/End: Original strand, 46007913 - 46007942
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacac 81  Q
    ||||||||||||||||||||||||||||||    
T  46007913 tcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 47433781 - 47433716
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctct-cccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||| ||||||||||| ||||||||| | || |||||||||||||||| ||| |||| ||||||||    
T  47433781 gtccataatttaaaaacgaaaattaaacccttcccctcctaaaccctccatctaaacgcaccctta 47433716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 2917025 - 2916969
Alignment:
Q  28 aatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||| ||||||| ||| |||||||||| ||||||||  ||| |||||||||||    
T  2917025 aatttaaagaagaaaaataaactctcccctcttaaaccctacatctaaacacaccct 2916969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 17182697 - 17182729
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||| |||||||||||||||||||||||||    
T  17182697 tcccctcataaaccctcaatccaaacacaccct 17182729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 37711335 - 37711367
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  37711335 tcccctcctaaaccctccatccaaacacaccct 37711367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 54935281 - 54935313
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  54935281 tcccctcctaaaccctccatccaaacacaccct 54935313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 23748172 - 23748105
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||| |||||||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  23748172 atatagtccgtagtttaaaaaagaaaactaaaccctcccctcctaaaccctcgatccaaacacaccct 23748105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 39821841 - 39821902
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccc 83  Q
    |||||||||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||    
T  39821841 gtccgtaatttaaaaaagaaaactaaaccctcccctcctaaaccctccatccaaacacaccc 39821902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 12541842 - 12541762
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctccc-----ctcctaaaccctcaatccaaacacacccttagggttt 92  Q
    ||||||||||||||||||||||||||| ||  |||||||     |||||||||||||||||||||||||| ||||| ||||    
T  12541842 atatagtccgtaatttaaaaaagaaaagtagactctcccctcccctcctaaaccctcaatccaaacacactcttagtgttt 12541762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 14196844 - 14196897
Alignment:
Q  25 cgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaaca 78  Q
    ||||||||||||||||||| ||||| |||||||||  |||||||||||||||||    
T  14196844 cgtaatttaaaaaagaaaagtaagccctcccctccagaaccctcaatccaaaca 14196897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 9592002 - 9592065
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacaca 80  Q
    ||||||| |||||||||||||| |||| |||| ||| ||||||||||| || ||||||||||||    
T  9592002 atatagtgcgtaatttaaaaaaaaaaagtaagttcttccctcctaaactcttaatccaaacaca 9592065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 1583249 - 1583311
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||| ||||| | | | |||||||||||||||||| ||||||||| |||||    
T  1583249 gtccgtaatttaaaaatgaaaagtgaaccctcccctcctaaaccctccatccaaacaaaccct 1583311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 17380053 - 17380087
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||||||||||||||||||||||    
T  17380053 tcccctcctaaaccctcaatccaaacacaccctta 17380087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 19566988 - 19567062
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctccc-----ctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||||||||||  ||||||| | |||||     |||||||||||||||||||||||||| ||||    
T  19566988 atatagtccgtaatttaaaaaatgaaattaaaccctcccctcctctcctaaaccctcaatccaaacacactctta 19567062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 36347708 - 36347785
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctccc----------ctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||||||||||||| ||| |||||||          |||||||||||||||||||||||||||||    
T  36347708 atatagtccgtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacacaccct 36347785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 17379878 - 17379846
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||||||    
T  17379878 tcccctcctaaaccctcaatccaaacacaccct 17379846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 35736207 - 35736175
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||||||    
T  35736207 tcccctcctaaaccctcaatccaaacacaccct 35736175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 23748307 - 23748341
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||||| |||||||||||||||||    
T  23748307 tcccctcctaaaccctccatccaaacacaccctta 23748341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 31061391 - 31061357
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||| ||||||||||||||||||||    
T  31061391 tcccctcctaaaccttcaatccaaacacaccctta 31061357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 39732798 - 39732736
Alignment:
Q  25 cgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||| ||||| ||| | ||||||||||||||| || ||| |||||||| |||||    
T  39732798 cgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatctaaacacactcttag 39732736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 84
Target Start/End: Complemental strand, 40022393 - 40022363
Alignment:
Q  54 ccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||||    
T  40022393 ccctcctaaaccctcaatccaaacacaccct 40022363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 45257339 - 45257305
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||| |||||||||||||||||||||    
T  45257339 tcccctcctaaactctcaatccaaacacaccctta 45257305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 7681325 - 7681260
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacc 82  Q
    ||||| ||||||||| ||||| |||||  || |  |||||||||||||||| ||||||||||||||    
T  7681325 atataatccgtaattaaaaaatgaaaaacaaacattcccctcctaaaccctaaatccaaacacacc 7681260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 14187141 - 14187092
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaa 76  Q
    ||||||||||||||||| ||||| ||||||| | ||||| ||||||||||    
T  14187141 taatttaaaaaagaaaagtaagccctccccttcaaaaccttcaatccaaa 14187092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 81
Target Start/End: Original strand, 36567064 - 36567093
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacac 81  Q
    ||||||||||||||||||||||||||||||    
T  36567064 tcccctcctaaaccctcaatccaaacacac 36567093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 41778803 - 41778770
Alignment:
Q  54 ccctcctaaaccctcaatccaaacacacccttag 87  Q
    |||| |||||||||||||||||||||||||||||    
T  41778803 cccttctaaaccctcaatccaaacacacccttag 41778770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 887283 - 887319
Alignment:
Q  23 tccgtaatttaaaaaagaaaattaagctctcccctcc 59  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  887283 tccgtaatttaaaaaagaaaagtaagcgctcccctcc 887319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 9427017 - 9426973
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttagggtttaggt 96  Q
    |||||||||||||  |||||||||||||||| |||| ||||||||    
T  9427017 tcccctcctaaactttcaatccaaacacaccattagagtttaggt 9426973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 9631774 - 9631806
Alignment:
Q  54 ccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  9631774 ccctcctaaaccctccatccaaacacaccctta 9631806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 22356216 - 22356248
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||| ||||||||||||||||||||    
T  22356216 tcccctcctaaatcctcaatccaaacacaccct 22356248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Original strand, 35736402 - 35736434
Alignment:
Q  55 cctcctaaaccctcaatccaaacacacccttag 87  Q
    |||||||||||||| ||||||||||||||||||    
T  35736402 cctcctaaaccctccatccaaacacacccttag 35736434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 42296515 - 42296547
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||| |||||||||||||||||||||    
T  42296515 tcccctcctaatccctcaatccaaacacaccct 42296547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 16653026 - 16652956
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccc-tcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||||||||||||||| ||| | |||||| ||| ||||||||||||||||||||||||||    
T  16653026 atatagtccgtaatttaaaaaagaaaagtaaaccctccccctccaaaaccctcaatccaaacacaccctta 16652956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 37032456 - 37032388
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||| |||||||||||||||||| ||| |||| |||||||||||| |||||||||||| |||||||    
T  37032456 atatagtctgtaatttaaaaaagaaaaataaactct-ccctcctaaaccttcaatccaaacaaaccctta 37032388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 9718551 - 9718487
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||| ||||||  | | |||||||||||||||||| |||||||||||||||||    
T  9718551 gtccgtaatttaaaaatgaaaatcgaaccctcccctcctaaaccctccatccaaacacaccctta 9718487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 11785603 - 11785537
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccc 83  Q
    ||||||| | ||||||||||||||||| ||| ||||||||||||||||||  ||| |||||||||||    
T  11785603 atatagttcataatttaaaaaagaaaagtaaactctcccctcctaaacccggaattcaaacacaccc 11785537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 12022355 - 12022390
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||||||||||||||||||||||||||    
T  12022355 tcccctcctaaaccctcaatccaaacacacccttag 12022390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 39449373 - 39449314
Alignment:
Q  25 cgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||| |||| | |||||||| |||||||||||||||| ||| ||||||||    
T  39449373 cgtaatttaaaaaataaaagtgagctctcctctcctaaaccctcaattcaaccacaccct 39449314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 43732711 - 43732676
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||||||||||||||||||||||||||    
T  43732711 tcccctcctaaaccctcaatccaaacacacccttag 43732676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 1026921 - 1026863
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacaca 80  Q
    ||||| |||||||||| ||||| ||| | |||||||||||||||||| |||||||||||    
T  1026921 gtccgcaatttaaaaatgaaaagtaaaccctcccctcctaaaccctccatccaaacaca 1026863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 20472760 - 20472702
Alignment:
Q  26 gtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||| ||||| || ||||| ||| ||||| |||||||||||||||    
T  20472760 gtaatttaaaaaagaaaagtaagcccttccctcttaatccctctatccaaacacaccct 20472702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 6315095 - 6315058
Alignment:
Q  55 cctcctaaaccctcaatccaaacacacccttagggttt 92  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  6315095 cctcctaaaccctcaatccaaacacacccttagtgttt 6315058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 8815354 - 8815387
Alignment:
Q  53 cccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||||||||||||||||||||||    
T  8815354 cccctcctaaaccctcaatccaaacacaccctta 8815387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 7503022 - 7502962
Alignment:
Q  26 gtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||| | |||  || | ||||||||| ||||||||||||||||||||||||||    
T  7503022 gtaatttaaaaatggaaagcaaaccctcccctcccaaaccctcaatccaaacacaccctta 7502962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 33922597 - 33922525
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctc-----tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||| |||||||||||||||| ||| |||     |||| |||||||||||||||||||||| |||||    
T  33922597 atatagtccggaatttaaaaaagaaaagtaaactctcccttcccttcctaaaccctcaatccaaacataccct 33922525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 35694798 - 35694742
Alignment:
Q  26 gtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacc 82  Q
    |||||||||||| ||||| |||  |||||||||||||||||||||| ||||| ||||    
T  35694798 gtaatttaaaaatgaaaactaaattctcccctcctaaaccctcaattcaaacgcacc 35694742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 7979217 - 7979175
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcc 59  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||    
T  7979217 atatagtccgtaatttaaaaaagaaaagtaaactctcctctcc 7979175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 41103536 - 41103502
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||||| |||||||||||||||||    
T  41103536 tcccctcctaaaccctccatccaaacacaccctta 41103502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 85
Target Start/End: Original strand, 7394673 - 7394706
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctt 85  Q
    ||||||||||||||||||||||||||||| ||||    
T  7394673 tcccctcctaaaccctcaatccaaacacatcctt 7394706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 84
Target Start/End: Original strand, 9718694 - 9718723
Alignment:
Q  55 cctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||||||||||||||||    
T  9718694 cctcctaaaccctcaatccaaacacaccct 9718723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 84
Target Start/End: Complemental strand, 30365159 - 30365130
Alignment:
Q  55 cctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||||||||||||||||    
T  30365159 cctcctaaaccctcaatccaaacacaccct 30365130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 30581985 - 30582022
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcc 59  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  30581985 gtccgtaatttaaaaaagaaaagtaagccctcccctcc 30582022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 44114250 - 44114299
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaa 76  Q
    |||||||||||||||||| |||  |||||||||||| ||||| |||||||    
T  44114250 taatttaaaaaagaaaatgaagtcctcccctcctaacccctctatccaaa 44114299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 2248484 - 2248452
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||| |||||||||||||||||||    
T  2248484 tcccctcctaaactctcaatccaaacacaccct 2248452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 3726895 - 3726863
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  3726895 tcccctcctaaaccctccatccaaacacaccct 3726863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 4247732 - 4247764
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||| ||||||||||||||||||    
T  4247732 tcccctcctaaaccttcaatccaaacacaccct 4247764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 8815173 - 8815141
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  8815173 tcccctcctaaaccctccatccaaacacaccct 8815141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 9434513 - 9434545
Alignment:
Q  54 ccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||| |||||||||||||||||||||||||||    
T  9434513 ccctcgtaaaccctcaatccaaacacaccctta 9434545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 13405008 - 13404976
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||| ||||||||    
T  13405008 tcccctcctaaaccctcaatccaaccacaccct 13404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 31543284 - 31543316
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||||||| |||||||||||    
T  31543284 tcccctcctaaaccctcaatcgaaacacaccct 31543316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 31738635 - 31738667
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  31738635 tcccctcctaaaccctccatccaaacacaccct 31738667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 84
Target Start/End: Original strand, 37032596 - 37032624
Alignment:
Q  56 ctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||    
T  37032596 ctcctaaaccctcaatccaaacacaccct 37032624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 40633200 - 40633236
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttagg 88  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  40633200 tcccttccgaaaccctcaatccaaacacacccttagg 40633236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 43732899 - 43732931
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  43732899 tcccctcctaaaccctccatccaaacacaccct 43732931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 37417800 - 37417870
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||| ||||||||| ||||| ||| |  ||||||||||||||||||||||||||||||||||||    
T  37417800 atatagtccgttatttaaaaatgaaaagtaaaccatcccctcctaaaccctcaatccaaacacacccttag 37417870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 17852942 - 17852881
Alignment:
Q  23 tccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||    
T  17852942 tccgtaatttaaaaaagaaaagtaatccctcccctcctaaaccctcaatctaaacacaccct 17852881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 17853045 - 17853106
Alignment:
Q  25 cgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  17853045 cgtaatttaaaaatgaaaagtaagccctcccctcctaaaccctccatccaaacacaccctta 17853106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 23116327 - 23116269
Alignment:
Q  26 gtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||| ||||| ||||| |||||||||||| |||||||||||||||    
T  23116327 gtaatttaaaaaagaaaagtaagccctcccttcctaaaccctccatccaaacacaccct 23116269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 42306411 - 42306342
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||| ||||||||||||||||||| || | || |||||||||| |||||||||||||||| |||||    
T  42306411 atatagtcggtaatttaaaaaagaaaatcaaacccttccctcctaaatcctcaatccaaacacaacctta 42306342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 48013682 - 48013739
Alignment:
Q  29 atttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  48013682 atttaaaaacgaaaagtaagctctcccctcctaatccctccatccaaacacaccctta 48013739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 37925873 - 37925833
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttagggttt 92  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  37925873 tcccctcctaaaccctcaatccaaacacacccttagagttt 37925833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 1051710 - 1051745
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||||||||||||||||||||||||||||||||||    
T  1051710 tcccctcctaaaccctcaatccaaacacacccttag 1051745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 10315690 - 10315623
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||| | |||||||||||||||| |||   ||||||||||||| | ||||||||||||||||||    
T  10315690 atatagtctgaaatttaaaaaagaaaagtaaatcctcccctcctaaatcttcaatccaaacacaccct 10315623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 37561889 - 37561838
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaaca 78  Q
    ||||||||||||||||| |||| |||||| ||||||||||||||| ||||||    
T  37561889 taatttaaaaaagaaaagtaagttctcccttcctaaaccctcaattcaaaca 37561838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 39646641 - 39646699
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacaca 80  Q
    ||||||||||||||||| |||| | ||   |||||||||||||||||||||||||||||    
T  39646641 gtccgtaatttaaaaaataaaagtgagtcatcccctcctaaaccctcaatccaaacaca 39646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 39856077 - 39856111
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||||||||||||||||||||||    
T  39856077 tcccctcctaaaccctcaatccaaacacaccctta 39856111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 40196699 - 40196768
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacccttag 87  Q
    ||||| |||||||||||||||  |||| ||| | ||||||||| |||||||||||||||| ||||||||||    
T  40196699 atatattccgtaatttaaaaacaaaaagtaaac-ctcccctcccaaaccctcaatccaaatacacccttag 40196768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 48881761 - 48881795
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||||||||||||||||||||||    
T  48881761 tcccctcctaaaccctcaatccaaacacaccctta 48881795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 33519260 - 33519300
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttagggttt 92  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  33519260 tcccctcctaaaccctccatccaaacacaccctaagggttt 33519300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 36267765 - 36267797
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||||||    
T  36267765 tcccctcctaaaccctcaatccaaacacaccct 36267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 28074135 - 28074100
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttag 87  Q
    |||||||||||||| |||||||||||||||||||||    
T  28074135 tcccctcctaaaccttcaatccaaacacacccttag 28074100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 83
Target Start/End: Original strand, 31571682 - 31571713
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccc 83  Q
    ||||||||||||||||||||||||||||||||    
T  31571682 tcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 40572306 - 40572247
Alignment:
Q  23 tccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacc 82  Q
    ||||||||||||||| ||||  ||| ||||||||| ||||| |||| |||||||||||||    
T  40572306 tccgtaatttaaaaatgaaatctaaactctccccttctaaatcctccatccaaacacacc 40572247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 48094068 - 48094127
Alignment:
Q  25 cgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||||| |||   ||||||||||||| |||  |||||||||||||||    
T  48094068 cgtaatttaaaaaagaaaagtaaatcctcccctcctaaatcctacatccaaacacaccct 48094127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 1013997 - 1013931
Alignment:
Q  21 agtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacccttag 87  Q
    |||| ||||||||||| |||||| ||||  ||||||||| |||||||| ||||||||| | ||||||    
T  1013997 agtctgtaatttaaaagagaaaagtaagtcctcccctccaaaaccctccatccaaacatatccttag 1013931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 13425152 - 13425118
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||||| |||||||||||||||||    
T  13425152 tcccctcctaaaccctctatccaaacacaccctta 13425118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 13771158 - 13771192
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||||||||| |||||||||||||    
T  13771158 tcccctcctaaaccctcaatctaaacacaccctta 13771192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 41496989 - 41496951
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttagggt 90  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  41496989 tcccctcctaaaccctccatccaaacacaccctaagggt 41496951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 41497124 - 41497166
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcc 59  Q
    ||||||||||||||||||||||||||| ||| | |||||||||    
T  41497124 atatagtccgtaatttaaaaaagaaaagtaaaccctcccctcc 41497166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 31364117 - 31364080
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcc 59  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  31364117 gtccgtaatttagaaaagaaaagtaagctctcccctcc 31364080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 81
Target Start/End: Original strand, 31364256 - 31364285
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacac 81  Q
    ||||||||||||||||||||||||||||||    
T  31364256 tcccctcctaaaccctcaatccaaacacac 31364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 31571637 - 31571678
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctc 58  Q
    |||| |||||||||||||||||||||| ||| ||||||||||    
T  31571637 atatggtccgtaatttaaaaaagaaaagtaaactctcccctc 31571678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 81
Target Start/End: Original strand, 33655320 - 33655349
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacac 81  Q
    ||||||||||||||||||||||||||||||    
T  33655320 tcccctcctaaaccctcaatccaaacacac 33655349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 81
Target Start/End: Original strand, 42306542 - 42306571
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacac 81  Q
    ||||||||||||||||||||||||||||||    
T  42306542 tcccctcctaaaccctcaatccaaacacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 13770980 - 13770948
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||| ||||||||||||||||||||    
T  13770980 tcccctcctaaatcctcaatccaaacacaccct 13770948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 82
Target Start/End: Original strand, 24970379 - 24970407
Alignment:
Q  54 ccctcctaaaccctcaatccaaacacacc 82  Q
    |||||||||||||||||||||||||||||    
T  24970379 ccctcctaaaccctcaatccaaacacacc 24970407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 25887224 - 25887192
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||| |||||||||||||||||||||||||    
T  25887224 tcccctcataaaccctcaatccaaacacaccct 25887192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 81
Target Start/End: Complemental strand, 26365798 - 26365770
Alignment:
Q  53 cccctcctaaaccctcaatccaaacacac 81  Q
    |||||||||||||||||||||||||||||    
T  26365798 cccctcctaaaccctcaatccaaacacac 26365770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 84
Target Start/End: Original strand, 28074324 - 28074352
Alignment:
Q  56 ctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||    
T  28074324 ctcctaaaccctcaatccaaacacaccct 28074352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 36267585 - 36267553
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  36267585 tcccctcctaaaccctccatccaaacacaccct 36267553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 36267624 - 36267588
Alignment:
Q  23 tccgtaatttaaaaaagaaaattaagctctcccctcc 59  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  36267624 tccgtaatttaaaaaagaaaactaagccctcccctcc 36267588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 40282229 - 40282197
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||||||||||||| |||||    
T  40282229 tcccctcctaaaccctcaatccaaacataccct 40282197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 47390887 - 47390855
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||| |||||||||||||||||||||    
T  47390887 tcccctcctaacccctcaatccaaacacaccct 47390855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 48881590 - 48881558
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  48881590 tcccctcctaaaccctccatccaaacacaccct 48881558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 8529876 - 8529809
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||  |||||||||||||||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  8529876 atatagtttgtaatttaaaaaagaaaagtaaaccctcccctcctaaaccctcaatccaaacgcaccct 8529809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 50744448 - 50744511
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacaca 80  Q
    |||||||||||||||||||||||||||  || | ||||||||||||||||||||||||| ||||    
T  50744448 atatagtccgtaatttaaaaaagaaaaacaaaccctcccctcctaaaccctcaatccaagcaca 50744511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 26941016 - 26941077
Alignment:
Q  23 tccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||| |||||||||||||||| | |  |||||||||||||||||||||||||||||||||    
T  26941016 tccgtattttaaaaaagaaaattgaaccttcccctcctaaaccctcaatccaaacacaccct 26941077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 12234087 - 12234008
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctct----------cccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||||    
T  12234087 atatagtccgtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacaccctta 12234008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 1344720 - 1344783
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctt 85  Q
    |||||||||||||||||||||| |||  | ||||||||||||||||| ||||||||||| ||||    
T  1344720 gtccgtaatttaaaaaagaaaaataaattttcccctcctaaaccctccatccaaacacatcctt 1344783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 51303417 - 51303380
Alignment:
Q  51 ctcccctcctaaaccctcaatccaaacacacccttagg 88  Q
    ||||||||||||||||||||||||||||||||||||||    
T  51303417 ctcccctcctaaaccctcaatccaaacacacccttagg 51303380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 33643445 - 33643499
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacc 82  Q
    |||||||||||||||| ||||  ||||||||||||||||||| |||||||||||||    
T  33643445 taatttaaaaaagaaa-ttaaattctcccctcctaaaccctctatccaaacacacc 33643499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 40287427 - 40287490
Alignment:
Q  19 atagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacc 82  Q
    ||||| |||| ||||||||| |||| | ||||||||||||||||| |||| |||||||||||||    
T  40287427 atagttcgtagtttaaaaaataaaagtgagctctcccctcctaaatcctccatccaaacacacc 40287490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 41498436 - 41498397
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttagggtt 91  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  41498436 tcccctcctaaaccctcaatccaaacacacccttaaggtt 41498397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 2470912 - 2470966
Alignment:
Q  27 taatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacac 81  Q
    ||||||||||||||||| ||| |  |||||||||||||| |||||||||||||||    
T  2470912 taatttaaaaaagaaaagtaaaccttcccctcctaaaccatcaatccaaacacac 2470966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 85
Target Start/End: Complemental strand, 26324046 - 26324013
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctt 85  Q
    ||||||||||||||||||||||||||||||||||    
T  26324046 tcccctcctaaaccctcaatccaaacacaccctt 26324013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 30010364 - 30010332
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||||||||||||||||    
T  30010364 tcccctcctaaaccctcaatccaaacacaccct 30010332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 47071223 - 47071287
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||||||||||||| | ||   |||| |||||||||||  |||||||||||||||||    
T  47071223 gtccgtaatttaaaaaagaaaagttagtcttcccttcctaaacccttcatccaaacacaccctta 47071287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 92
Target Start/End: Complemental strand, 1085520 - 1085481
Alignment:
Q  53 cccctcctaaaccctcaatccaaacacacccttagggttt 92  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  1085520 cccctcctaaaccctccatccaaacacacccttagagttt 1085481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 20607429 - 20607463
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||||| |||||||||||||||||    
T  20607429 tcccctcctaaaccctccatccaaacacaccctta 20607463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 35927846 - 35927812
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccctta 86  Q
    |||||||||||| ||||||||||||||||||||||    
T  35927846 tcccctcctaaaacctcaatccaaacacaccctta 35927812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 51597745 - 51597703
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcc 59  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||    
T  51597745 atatagtccgtgatttaaaaaagaaaagtaaactctcccctcc 51597703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 525173 - 525109
Alignment:
Q  22 gtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacacccttag 87  Q
    |||||||||||||||||||||| ||| | ||||||||||||| ||   ||||||||||| ||||||    
T  525173 gtccgtaatttaaaaaagaaaagtaatc-ctcccctcctaaatccatcatccaaacacatccttag 525109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 32951486 - 32951527
Alignment:
Q  18 tatagtccgtaatttaaaaaagaaaattaagctctcccctcc 59  Q
    |||||||||||||||||||| ||||| ||| |||||||||||    
T  32951486 tatagtccgtaatttaaaaacgaaaagtaaactctcccctcc 32951527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 525312 - 525344
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||| ||||||||||||||||||||||||||||    
T  525312 tcccgtcctaaaccctcaatccaaacacaccct 525344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 1085702 - 1085734
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  1085702 tcccctcctaaaccctctatccaaacacaccct 1085734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 2470762 - 2470730
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  2470762 tcccctcctaaaccctccatccaaacacaccct 2470730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 20607255 - 20607223
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||||||||| ||||||||||||    
T  20607255 tcccctcctaaaccctcaattcaaacacaccct 20607223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 38509926 - 38509894
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  38509926 tcccctcctaaaccctctatccaaacacaccct 38509894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 38510106 - 38510142
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacacccttagg 88  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  38510106 tcccctcctaaacccttaatccaaacacactcttagg 38510142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 40094965 - 40094933
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  40094965 tcccctcctaaaccctccatccaaacacaccct 40094933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 40095153 - 40095181
Alignment:
Q  59 ctaaaccctcaatccaaacacacccttag 87  Q
    |||||||||||||||||||||||||||||    
T  40095153 ctaaaccctcaatccaaacacacccttag 40095181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 49832722 - 49832778
Alignment:
Q  28 aatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||| ||| ||| |  |||||||||||| |||| |||||||||||||||    
T  49832722 aatttaaaaaaggaaaataaaccttcccctcctaaatcctccatccaaacacaccct 49832778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 184678 - 184611
Alignment:
Q  17 atatagtccgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||| | |||||||||||| |||| | | | ||||||||||||||||||||||||||||||||||    
T  184678 atatagttcataatttaaaaaataaaagtgaaccctcccctcctaaaccctcaatccaaacacaccct 184611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 6758 - 6818
Alignment:
Q  25 cgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccctt 85  Q
    ||||||||||||| ||||| ||||| ||||||||||||| |||| ||||||| ||||||||    
T  6758 cgtaatttaaaaacgaaaagtaagccctcccctcctaaatcctccatccaaagacaccctt 6818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 8216 - 8157
Alignment:
Q  25 cgtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    |||||||||||||| |||| | |||||||| |||||||||||||||| ||| ||||||||    
T  8216 cgtaatttaaaaaataaaagtgagctctcctctcctaaaccctcaattcaaccacaccct 8157  T

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Target: scaffold0026 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 1247 - 1208
Alignment:
Q  19 atagtccgtaatttaaaaaagaaaattaagctctcccctc 58  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  1247 atagtccgtaatttaaaaaagaaaagtaaactctcccctc 1208  T

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Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 81
Target Start/End: Complemental strand, 1204 - 1175
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacac 81  Q
    ||||||||||||||||||||||||||||||    
T  1204 tcccctcctaaaccctcaatccaaacacac 1175  T

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Target: scaffold0071 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 52954 - 52896
Alignment:
Q  26 gtaatttaaaaaagaaaattaagctctcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||| |||| | ||   |||| ||||||||||||||||||||||||||||    
T  52954 gtaatttaaaaaataaaagtgagtcttcccatcctaaaccctcaatccaaacacaccct 52896  T

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Target: scaffold0067 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 39359 - 39436
Alignment:
Q  19 atagtccgtaatttaaaaaagaaaattaagctctcccctc----------ctaaaccctcaatccaaacacaccctta 86  Q
    ||||||||||||||||||||||||| ||| | ||||||||          ||||||||||||||||||||||||||||    
T  39359 atagtccgtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacaccctta 39436  T

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Target: scaffold0067; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 39218 - 39186
Alignment:
Q  52 tcccctcctaaaccctcaatccaaacacaccct 84  Q
    ||||||||||||||||| |||||||||||||||    
T  39218 tcccctcctaaaccctccatccaaacacaccct 39186  T

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