View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13204_low_2 (Length: 702)

Name: NF13204_low_2
Description: NF13204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13204_low_2
NF13204_low_2
[»] chr6 (28 HSPs)
chr6 (358-693)||(6162214-6162549)
chr6 (391-693)||(33106931-33107222)
chr6 (384-693)||(15147713-15148010)
chr6 (390-693)||(20824165-20824456)
chr6 (390-693)||(14257148-14257439)
chr6 (18-132)||(6161864-6161978)
chr6 (536-693)||(20227809-20227966)
chr6 (536-693)||(22121793-22121950)
chr6 (576-693)||(34984291-34984408)
chr6 (390-526)||(20228187-20228323)
chr6 (390-526)||(22122171-22122307)
chr6 (387-488)||(6162678-6162779)
chr6 (385-488)||(33107351-33107454)
chr6 (385-488)||(34984535-34984637)
chr6 (382-479)||(20824594-20824691)
chr6 (185-267)||(6162030-6162123)
chr6 (390-488)||(14257568-14257666)
chr6 (390-479)||(15148148-15148237)
chr6 (390-486)||(20522148-20522244)
chr6 (415-487)||(20227083-20227155)
chr6 (415-487)||(22121067-22121139)
chr6 (387-520)||(7645940-7646074)
chr6 (390-471)||(14712831-14712913)
chr6 (430-487)||(20521227-20521284)
chr6 (390-477)||(8710341-8710429)
chr6 (384-477)||(19595650-19595744)
chr6 (390-477)||(5974012-5974100)
chr6 (390-465)||(21113203-21113279)
[»] chr2 (34 HSPs)
chr2 (390-693)||(34038037-34038340)
chr2 (390-693)||(3854067-3854359)
chr2 (390-693)||(12089695-12089987)
chr2 (383-693)||(11450984-11451282)
chr2 (390-693)||(26525463-26525756)
chr2 (390-693)||(1804460-1804751)
chr2 (390-693)||(6476088-6476379)
chr2 (411-693)||(22701534-22701805)
chr2 (390-693)||(27377650-27377941)
chr2 (390-693)||(39096752-39097045)
chr2 (385-509)||(10708019-10708144)
chr2 (382-479)||(1804225-1804322)
chr2 (451-652)||(38110246-38110435)
chr2 (390-488)||(3854488-3854586)
chr2 (390-488)||(26525885-26525983)
chr2 (390-479)||(6476517-6476606)
chr2 (390-488)||(12090116-12090214)
chr2 (390-488)||(39096525-39096623)
chr2 (385-479)||(11450752-11450846)
chr2 (390-479)||(27378079-27378168)
chr2 (384-488)||(34037804-34037908)
chr2 (390-513)||(44934648-44934772)
chr2 (381-479)||(10709467-10709566)
chr2 (382-512)||(44929976-44930107)
chr2 (385-520)||(18107383-18107519)
chr2 (396-498)||(18105723-18105826)
chr2 (385-479)||(39947085-39947180)
chr2 (379-487)||(23221824-23221933)
chr2 (390-438)||(22704425-22704473)
chr2 (444-479)||(10710829-10710864)
chr2 (390-471)||(32861047-32861129)
chr2 (385-489)||(39945838-39945943)
chr2 (390-467)||(21182308-21182386)
chr2 (390-466)||(2191218-2191295)
[»] chr7 (23 HSPs)
chr7 (390-693)||(29784163-29784467)
chr7 (383-693)||(884676-884975)
chr7 (390-693)||(28898257-28898549)
chr7 (383-693)||(1244005-1244304)
chr7 (390-693)||(41298245-41298537)
chr7 (390-693)||(18443177-18443470)
chr7 (385-693)||(33847862-33848158)
chr7 (576-693)||(22954274-22954391)
chr7 (390-488)||(29783936-29784034)
chr7 (390-488)||(1244433-1244531)
chr7 (390-488)||(18443599-18443697)
chr7 (390-488)||(28898030-28898128)
chr7 (390-488)||(41298666-41298764)
chr7 (390-488)||(33848287-33848385)
chr7 (390-479)||(22954047-22954136)
chr7 (389-474)||(11974894-11974976)
chr7 (390-479)||(30939563-30939653)
chr7 (390-466)||(28838526-28838603)
chr7 (391-466)||(20544322-20544398)
chr7 (430-478)||(27311048-27311096)
chr7 (390-468)||(49053717-49053796)
chr7 (390-471)||(23548841-23548923)
chr7 (197-241)||(33310239-33310283)
[»] chr1 (26 HSPs)
chr1 (390-693)||(45230130-45230422)
chr1 (390-693)||(30427674-30427966)
chr1 (390-693)||(17968265-17968557)
chr1 (390-693)||(47410651-47410942)
chr1 (390-693)||(32266484-32266775)
chr1 (390-693)||(40124077-40124368)
chr1 (390-693)||(9122686-9122977)
chr1 (390-693)||(46802323-46802614)
chr1 (385-488)||(17968033-17968136)
chr1 (390-488)||(30428095-30428193)
chr1 (390-488)||(45230551-45230649)
chr1 (390-479)||(32266913-32267002)
chr1 (390-479)||(8997341-8997431)
chr1 (390-479)||(9123115-9123204)
chr1 (390-479)||(40124506-40124595)
chr1 (384-488)||(46802743-46802847)
chr1 (449-520)||(8998193-8998264)
chr1 (390-488)||(47410424-47410522)
chr1 (390-488)||(36793564-36793663)
chr1 (390-479)||(1500980-1501070)
chr1 (390-466)||(37717808-37717884)
chr1 (390-471)||(3591171-3591253)
chr1 (444-513)||(12868489-12868558)
chr1 (390-488)||(36792241-36792339)
chr1 (390-447)||(42723124-42723182)
chr1 (390-487)||(45664688-45664786)
[»] chr4 (46 HSPs)
chr4 (390-693)||(43979558-43979850)
chr4 (385-693)||(12922870-12923167)
chr4 (390-693)||(790123-790415)
chr4 (390-693)||(46262863-46263155)
chr4 (382-693)||(30545706-30546007)
chr4 (390-693)||(1317061-1317353)
chr4 (390-693)||(28957539-28957830)
chr4 (390-693)||(28505210-28505502)
chr4 (390-693)||(31228107-31228398)
chr4 (390-693)||(40841463-40841754)
chr4 (390-693)||(21235029-21235322)
chr4 (390-693)||(2669235-2669526)
chr4 (390-693)||(38025904-38026195)
chr4 (391-693)||(55347563-55347853)
chr4 (389-525)||(12108242-12108378)
chr4 (385-488)||(43979979-43980082)
chr4 (390-488)||(12922643-12922741)
chr4 (390-488)||(21235451-21235548)
chr4 (385-479)||(28957307-28957401)
chr4 (390-488)||(30546136-30546234)
chr4 (390-479)||(31227880-31227969)
chr4 (390-513)||(47053762-47053886)
chr4 (385-512)||(47058473-47058601)
chr4 (381-488)||(54167486-54167594)
chr4 (385-476)||(1317494-1317585)
chr4 (390-488)||(789896-789994)
chr4 (390-488)||(40841883-40841981)
chr4 (390-488)||(46262636-46262734)
chr4 (385-488)||(2669003-2669106)
chr4 (390-488)||(38025677-38025775)
chr4 (382-487)||(49426343-49426449)
chr4 (396-477)||(55347970-55348051)
chr4 (390-477)||(54142326-54142414)
chr4 (385-487)||(17287483-17287586)
chr4 (391-477)||(12107708-12107794)
chr4 (387-487)||(49424452-49424553)
chr4 (390-477)||(17288374-17288462)
chr4 (390-477)||(54143502-54143590)
chr4 (390-464)||(1791389-1791464)
chr4 (186-237)||(19893744-19893795)
chr4 (390-466)||(10580041-10580118)
chr4 (390-471)||(29691746-29691828)
chr4 (391-464)||(35166708-35166782)
chr4 (391-464)||(48554071-48554145)
chr4 (390-466)||(7118005-7118081)
chr4 (385-468)||(7118174-7118258)
[»] chr3 (31 HSPs)
chr3 (390-693)||(27475526-27475818)
chr3 (385-693)||(22406838-22407135)
chr3 (390-693)||(34949984-34950276)
chr3 (390-693)||(42606281-42606572)
chr3 (385-693)||(45539437-45539733)
chr3 (390-693)||(4199454-4199747)
chr3 (393-693)||(2388636-2388924)
chr3 (390-693)||(36899255-36899546)
chr3 (385-693)||(46689678-46689974)
chr3 (390-488)||(4199876-4199974)
chr3 (390-488)||(34949757-34949855)
chr3 (390-479)||(46690112-46690201)
chr3 (390-474)||(27475391-27475475)
chr3 (384-488)||(45539204-45539308)
chr3 (385-488)||(22407264-22407367)
chr3 (384-513)||(20826723-20826853)
chr3 (444-520)||(35300800-35300876)
chr3 (390-488)||(42606701-42606799)
chr3 (432-512)||(20831067-20831147)
chr3 (390-488)||(2389053-2389151)
chr3 (390-488)||(36899675-36899773)
chr3 (384-477)||(48868588-48868682)
chr3 (430-486)||(54588499-54588555)
chr3 (390-471)||(25770495-25770577)
chr3 (440-513)||(35301858-35301931)
chr3 (430-478)||(51587571-51587619)
chr3 (384-466)||(132071-132154)
chr3 (444-499)||(7248468-7248523)
chr3 (192-251)||(22909075-22909134)
chr3 (389-463)||(27013582-27013657)
chr3 (390-466)||(44504398-44504475)
[»] chr5 (35 HSPs)
chr5 (390-693)||(3878773-3879065)
chr5 (390-693)||(31092996-31093288)
chr5 (390-693)||(21949401-21949692)
chr5 (390-693)||(5746989-5747280)
chr5 (390-693)||(28641389-28641680)
chr5 (390-693)||(6543416-6543707)
chr5 (390-693)||(31162422-31162713)
chr5 (390-693)||(3191799-3192092)
chr5 (390-693)||(39402440-39402733)
chr5 (385-488)||(39402208-39402311)
chr5 (385-488)||(3192221-3192324)
chr5 (390-479)||(31162851-31162940)
chr5 (390-512)||(19352300-19352423)
chr5 (385-479)||(28641157-28641251)
chr5 (390-488)||(31093417-31093515)
chr5 (383-479)||(5746755-5746851)
chr5 (390-512)||(119924-120047)
chr5 (385-519)||(14625118-14625252)
chr5 (390-479)||(21949830-21949919)
chr5 (383-479)||(6543845-6543940)
chr5 (390-512)||(119011-119134)
chr5 (390-488)||(3879194-3879292)
chr5 (384-489)||(718213-718319)
chr5 (430-513)||(30351669-30351752)
chr5 (381-476)||(119176-119272)
chr5 (432-500)||(19353216-19353284)
chr5 (381-479)||(19353068-19353167)
chr5 (390-487)||(4186755-4186853)
chr5 (390-503)||(14626064-14626178)
chr5 (430-479)||(19352513-19352562)
chr5 (389-479)||(37813375-37813466)
chr5 (430-476)||(119786-119832)
chr5 (390-471)||(3406692-3406774)
chr5 (389-466)||(16284274-16284352)
chr5 (390-466)||(18999367-18999444)
[»] chr8 (20 HSPs)
chr8 (392-693)||(12734401-12734691)
chr8 (390-693)||(29917333-29917626)
chr8 (537-692)||(42253366-42253521)
chr8 (379-488)||(29917095-29917204)
chr8 (390-486)||(24845964-24846060)
chr8 (390-488)||(12734174-12734272)
chr8 (379-512)||(4624350-4624484)
chr8 (390-478)||(4624534-4624623)
chr8 (430-478)||(16682573-16682621)
chr8 (387-488)||(20682914-20683016)
chr8 (390-471)||(21005956-21006038)
chr8 (424-477)||(22601534-22601587)
chr8 (396-466)||(6297874-6297945)
chr8 (388-502)||(44148576-44148691)
chr8 (390-471)||(6297636-6297718)
chr8 (390-471)||(44024399-44024481)
chr8 (391-471)||(10047653-10047734)
chr8 (378-478)||(26720310-26720411)
chr8 (186-246)||(9040341-9040401)
chr8 (390-501)||(36155272-36155384)
[»] scaffold0085 (2 HSPs)
scaffold0085 (390-693)||(39649-39940)
scaffold0085 (390-479)||(39422-39511)
[»] scaffold0148 (2 HSPs)
scaffold0148 (390-513)||(29275-29399)
scaffold0148 (390-512)||(32960-33083)
[»] scaffold0009 (1 HSPs)
scaffold0009 (390-466)||(107896-107973)


Alignment Details
Target: chr6 (Bit Score: 288; Significance: 1e-161; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 358 - 693
Target Start/End: Original strand, 6162214 - 6162549
Alignment:
Q  358 gggaacacacgataacccttttattttaaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgt 457  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  6162214 gggaacacacgataacccttttattttaaagagttaaatatgttttttgtccctacgttttgcacaattttgagaatagtcattacatttcaataaatgt 6162313  T
Q  458 ttttaaaattcctacatttttcgtccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaac 557  Q
    ||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6162314 ttttaaaatccctacatttttcctccgttagcgtaaatagtccatgttgtcaaatttctaacgtgatgccaatattggcggtttaatcttgccggaaaac 6162413  T
Q  558 ggcagagaactttcctatgaacttcaccacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtt 657  Q
    |||||||||||| | |||||||||||||||||| |||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6162414 ggcagagaacttccttatgaacttcaccacgatctttctccgcagcgtcgtagatgcggatcgtcggtgttcgtcacgcttccagtgaaatatgttggtt 6162513  T
Q  658 tagagggaaagatttggaggccgaaagtgatgatgt 693  Q
    ||||||||||||||||||||||||||||||||||||    
T  6162514 tagagggaaagatttggaggccgaaagtgatgatgt 6162549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 391 - 693
Target Start/End: Original strand, 33106931 - 33107222
Alignment:
Q  391 ttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |  |||||     
T  33106931 ttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagt 33107030  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  ||            ||||||||||||||    
T  33107031 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggtgga------------gaacttcaccacga 33107118  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  33107119 tctttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgatg 33107218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 384 - 693
Target Start/End: Original strand, 15147713 - 15148010
Alignment:
Q  384 taaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtcc 483  Q
    ||||| ||||||||||||||| |||||||| |||| | |||||| ||||||| ||  || ||||||||||||||||||||||| |||||||||||| |||    
T  15147713 taaagggttaaatatgtttttggtccctacattttacgcgatttagagaataatccctacatttcaataaatgtttttaaaatccctacatttttcctcc 15147812  T
Q  484 gttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttca 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| | |||||||            |    
T  15147813 gttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcggggaacttt------------a 15147900  T
Q  584 ccacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaa 683  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  15147901 ccacgatctttctccgcagcatcgtagatgcggatcgccggtgttcgtcagatttccagtgaaatatgttggtttagaggggaagattttgaggccgaaa 15148000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 20824165 - 20824456
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| |||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  20824165 gttaaatatgtttttggtccctacattttacacgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 20824264  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||| |             |||||||||||||     
T  20824265 gtaaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggtggttcaatctcgccggaaaacggcgg------------ggaacttcaccacgg 20824352  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || |||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  20824353 tctttctccgcaacgtcgtagatgcggatcgccggtgttcgtgacatttccagtgaaatatgttggtttagatggaaagatttggaggccgaaagcgatg 20824452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 14257148 - 14257439
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||  |||||||||    
T  14257148 gttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttagc 14257247  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| |||||||| |             ||||||||||||||    
T  14257248 gtaaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggcggttcaatctcgccgaaaaacggcgg------------ggaacttcaccacga 14257335  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||||| || |||||||||||||||  |||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  14257336 tctttctccgcagcgtcgtagatgcggatcgccactgtttgtcacatttccagtgaaatatgttggtttagaggggaagatttggaggccgaaagcgatg 14257435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 6161864 - 6161978
Alignment:
Q  18 tgatttaatgaacttgagcgcgtttgaaatcctacttgattggttttccaacatttattttaagaaggtttaaatgcacttttgatttcaacttgatcga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6161864 tgatttaatgaacttgagcgcgtttgaaatcctacttgattggttttccaacatttattttaagaaggtttaaatgcacttttgatctcaacttgatcga 6161963  T
Q  118 aatttaagtactcat 132  Q
    |||||||||||||||    
T  6161964 aatttaagtactcat 6161978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 536 - 693
Target Start/End: Complemental strand, 20227966 - 20227809
Alignment:
Q  536 cggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacg 635  Q
    ||||| |||||| ||||||||||||||||||||| ||||||| |||||||| ||| |||||| ||||| |||||||  | ||||||||||||||||||||    
T  20227966 cggttcaatctcaccggaaaacggcagagaacttccctatgagcttcaccatgatctttctctgcagcgtcatagacacagatcgccggtgttcgtcacg 20227867  T
Q  636 cttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatgatgt 693  Q
    ||||||||||||| ||||||||||||||| | ||||||||| || |||| ||||||||    
T  20227866 cttccagtgaaatttgttggtttagaggggaggatttggagtccaaaagcgatgatgt 20227809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 536 - 693
Target Start/End: Complemental strand, 22121950 - 22121793
Alignment:
Q  536 cggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacg 635  Q
    ||||| |||||| ||||||||||||||||||||| ||||||| |||||||| ||| |||||| ||||| |||||||  | ||||||||||||||||||||    
T  22121950 cggttcaatctcaccggaaaacggcagagaacttccctatgagcttcaccatgatctttctctgcagcgtcatagacacagatcgccggtgttcgtcacg 22121851  T
Q  636 cttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatgatgt 693  Q
    ||||||||||||| ||||||||||||||| | ||||||||| || |||| ||||||||    
T  22121850 cttccagtgaaatttgttggtttagaggggaggatttggagtccaaaagcgatgatgt 22121793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 576 - 693
Target Start/End: Original strand, 34984291 - 34984408
Alignment:
Q  576 gaacttcaccacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttgga 675  Q
    ||||||||||| ||| |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  34984291 gaacttcaccatgatctttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttgga 34984390  T
Q  676 ggccgaaagtgatgatgt 693  Q
    ||||||||| ||||||||    
T  34984391 ggccgaaagcgatgatgt 34984408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 390 - 526
Target Start/End: Complemental strand, 20228323 - 20228187
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    |||||||||||| || |||||| |  ||| ||| ||||||||||||||   || |||| |||||||||||||||||| |||||||||||| || ||||||    
T  20228323 gttaaatatgttattggtccctgcaattttcacaattttgagaatagttcctacattttaataaatgtttttaaaatccctacatttttcctctgttagc 20228224  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgc 526  Q
    |||||||||||||| |||||||||||||||| |||||    
T  20228223 gtaaatagtccctgctgtcaaatttctaacgggatgc 20228187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 390 - 526
Target Start/End: Complemental strand, 22122307 - 22122171
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    |||||||||||| || |||||| |  ||| ||| ||||||||||||||   || |||| |||||||||||||||||| |||||||||||| || ||||||    
T  22122307 gttaaatatgttattggtccctgcaattttcacaattttgagaatagttcctacattttaataaatgtttttaaaatccctacatttttcctctgttagc 22122208  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgc 526  Q
    |||||||||||||| |||||||||||||||| |||||    
T  22122207 gtaaatagtccctgctgtcaaatttctaacgggatgc 22122171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 387 - 488
Target Start/End: Complemental strand, 6162779 - 6162678
Alignment:
Q  387 agagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgtt 486  Q
    |||||||||||||||||| |||||||| |||||| |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||  ||||||    
T  6162779 agagttaaatatgtttttggtccctacattttgcgcgattttgagaatagtctctacatttcaataaatgtttttaaaatccctacattttttctccgtt 6162680  T
Q  487 ag 488  Q
    ||    
T  6162679 ag 6162678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 385 - 488
Target Start/End: Complemental strand, 33107454 - 33107351
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccg 484  Q
    |||| ||||||||||||||| |||||||| |||||| |||||||||||||||||  || |||||||| |||||||||||||| |||||||||||  ||||    
T  33107454 aaagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccg 33107355  T
Q  485 ttag 488  Q
    ||||    
T  33107354 ttag 33107351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 385 - 488
Target Start/End: Complemental strand, 34984637 - 34984535
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccg 484  Q
    |||| ||||||||||||||| |||||||| |||||| |||||||||||||||||  || |||||||||||||||||||||| ||||||||||||  ||||    
T  34984637 aaagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaataaatgtttttaaaa-tcctacattttttctccg 34984539  T
Q  485 ttag 488  Q
    ||||    
T  34984538 ttag 34984535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 382 - 479
Target Start/End: Complemental strand, 20824691 - 20824594
Alignment:
Q  382 tttaaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||| ||||||||||||||| |||||||| |||| | |||||||||||||| ||  || ||||||||||||||||||||||| ||||||||||||    
T  20824691 tttaaagggttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 20824594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 6162030 - 6162123
Alignment:
Q  185 cttagtcccacatcaattttagagatttgtcactctcttt-----------aatgatgtgacatgtgtgtgttggttttttcattttccatgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  6162030 cttagtcccacatcaattttagagatttgtcactctctttaatgatgtggcaatgatgtgacatgtgtgtgttggttttttcattttccatgtc 6162123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 14257666 - 14257568
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||  ||||   | |||||||||||||||  || ||||||||||||||||||||||| |||||||||||| | ||||||    
T  14257666 gttaaatatgtttttggtccctatattttatgcaattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttccttcgttag 14257568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 390 - 479
Target Start/End: Complemental strand, 15148237 - 15148148
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||||||||| |||||||  |||| | | ||||||| |||||||  || ||||||||||||| ||||||||| ||||||||||||    
T  15148237 gttaaatatgtttttggtccctatattttacgcaattttgataatagtccctacatttcaataaatgattttaaaatccctacatttttc 15148148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 390 - 486
Target Start/End: Complemental strand, 20522244 - 20522148
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgtt 486  Q
    ||||||||||||||| || ||||| ||||| |||||||||| ||||||||  || |||||||||||||||||||||||  ||||||||| | ||||||    
T  20522244 gttaaatatgtttttggttcctacattttg-acgattttgaagaatagtccctacatttcaataaatgtttttaaaatcactacattttacctccgtt 20522148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 415 - 487
Target Start/End: Original strand, 20227083 - 20227155
Alignment:
Q  415 ttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgtta 487  Q
    |||||| ||||||||||||||||   ||||||||||||||| ||||||||||||||| ||||||  |||||||    
T  20227083 ttttgcgcgattttgagaatagttcctatatttcaataaatatttttaaaattcctatattttttctccgtta 20227155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 415 - 487
Target Start/End: Original strand, 22121067 - 22121139
Alignment:
Q  415 ttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgtta 487  Q
    |||||| ||||||||||||||||   ||||||||||||||| ||||||||||||||| ||||||  |||||||    
T  22121067 ttttgcgcgattttgagaatagttcctatatttcaataaatatttttaaaattcctatattttttctccgtta 22121139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 520
Target Start/End: Complemental strand, 7646074 - 7645940
Alignment:
Q  387 agagttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgt 485  Q
    |||||||||||||||||| |||| ||| |||||  |   ||||| |||||||| ||| ||||||||||||||||| |||||||  |||||||   |||||    
T  7646074 agagttaaatatgtttttagtccttacattttgtgctcctttgaagaatagtccttacatttcaataaatgttttaaaaattctcacattttatctccgt 7645975  T
Q  486 tagcgtaaatagtccctgttgtcaaatttctaacg 520  Q
    || |  || ||||||||| ||| || |||||||||    
T  7645974 tatcaaaattagtccctgctgttaattttctaacg 7645940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 471
Target Start/End: Original strand, 14712831 - 14712913
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttg-agaatagtcattatatttcaataaatgtttttaaaattccta 471  Q
    ||||||||||||||| |||||||| ||||||   | |||| | ||||||| ||| ||||||||||||||||||||||| ||||    
T  14712831 gttaaatatgtttttggtccctacattttgcgtcactttgaaaaatagtccttacatttcaataaatgtttttaaaatcccta 14712913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 430 - 487
Target Start/End: Original strand, 20521227 - 20521284
Alignment:
Q  430 agaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgtta 487  Q
    |||||||||  |||||||||| ||||||||||||||| |||||| ||||| |||||||    
T  20521227 agaatagtccctatatttcaaaaaatgtttttaaaatccctacaattttcctccgtta 20521284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 477
Target Start/End: Complemental strand, 8710429 - 8710341
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttt 477  Q
    ||||||||||||||| |||| ||  ||||||||   ||||| |||||||| ||| |||||| |||||||||||||||| || |||||||    
T  8710429 gttaaatatgtttttagtccttatattttgcacccctttgaagaatagtccttacatttcattaaatgtttttaaaatccccacatttt 8710341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 384 - 477
Target Start/End: Complemental strand, 19595744 - 19595650
Alignment:
Q  384 taaagagttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttt 477  Q
    ||||| |||||||||||| || |||| ||| ||||||||  |||| | ||||||||  || |||||||||||| |||||||||| |||| |||||    
T  19595744 taaagggttaaatatgttattagtccatacattttgcacctttttaaagaatagtccctacatttcaataaatatttttaaaatccctatatttt 19595650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 390 - 477
Target Start/End: Original strand, 5974012 - 5974100
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttt 477  Q
    ||||||||||||||| |||| ||  ||||||||   ||||| ||||||||  || |||||| |||||||||||||||| || |||||||    
T  5974012 gttaaatatgtttttagtccttatattttgcacccctttgaagaatagtccctacatttcattaaatgtttttaaaatccccacatttt 5974100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 390 - 465
Target Start/End: Original strand, 21113203 - 21113279
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaaa 465  Q
    ||||||||||| |||  ||||||||||||||  || ||||| || ||||||||  |||||||||||| |||||||||    
T  21113203 gttaaatatgtctttgatccctacgttttgcgtgactttgaaaaatagtcattgcatttcaataaatatttttaaaa 21113279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 208; Significance: 1e-113; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 34038340 - 34038037
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    |||||||| || ||| ||||||||||||||||||||||||||||||||  ||| |||||||||||| ||||||||||||||||||||||| || |||||     
T  34038340 gttaaatacgtatttggtccctacgttttgcacgattttgagaatagtttttacatttcaataaatatttttaaaattcctacatttttcctcagttagt 34038241  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||    
T  34038240 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcggagaacttccctatgaacttcaccgcga 34038141  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||||| || |||||||||||| |||||||||||| | ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  34038140 tctttctccgcagcgtcgtagatgcggatcaccggtgttcgtcgcacttccggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgatg 34038041  T
Q  690 atgt 693  Q
    ||||    
T  34038040 atgt 34038037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 3854067 - 3854359
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |  |||||    
T  3854067 gttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttag 3854166  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||            |||||||||||||    
T  3854167 tgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcgga------------gaacttcaccacg 3854254  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    || |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  3854255 atctttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgat 3854354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 12089695 - 12089987
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||| |||  ||| ||||||||||||||||||||||| |||||||||||| |  |||||    
T  12089695 gttaaatatgtttttggtccctacgttttgcacaattttgagaattagttcttacatttcaataaatgtttttaaaatccctacatttttcctgagttag 12089794  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||            |||||||||||||    
T  12089795 tgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctccccggaaaacggcgga------------gaacttcaccacg 12089882  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    ||||||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  12089883 atttttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgat 12089982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 383 - 693
Target Start/End: Complemental strand, 11451282 - 11450984
Alignment:
Q  383 ttaaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtc 482  Q
    |||||| ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| ||    
T  11451282 ttaaagggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctc 11451183  T
Q  483 cgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttc 582  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||| |             |||||||    
T  11451182 cgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggtggttcaatctcgccggaaaacggcgg------------ggaacttc 11451095  T
Q  583 accacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaa 682  Q
    |||||| | |||||||||| | || |||||||||||||||||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  11451094 accacggtctttctccgcaacgtcgtagatgcggatcgccggtgttcgtgacatttccagtgaaatatgttggtttagatggaaagatttggaggccgaa 11450995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 26525463 - 26525756
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||  ||| |||||||||||| |||||||||| |||||||||||| ||  ||||     
T  26525463 gttaaatatgtttttggtccctacgttttgcacgattttgagagtagttcttacatttcaataaatatttttaaaatccctacatttttcctcaattagt 26525562  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||          ||||| |||||||||||||||||||    
T  26525563 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcagttcaatctcgccggaa----------aacttccctatgaacttcaccacga 26525652  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||||| || |||||| ||||||||| |||||||||| |||||  |||||||||||||||||||||| || |||||||||||||||| ||||    
T  26525653 tctttctccgcagcgtcgtagatgtggatcgccgctgttcgtcacacttccgatgaaatatgttggtttagaggggaatatttggaggccgaaagcgatg 26525752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 1804751 - 1804460
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  1804751 gttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 1804652  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||| |             |||||||||||||     
T  1804651 gtaaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggtggttcaatctcgccggaaaacggcgg------------ggaacttcaccacgg 1804564  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || |||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  1804563 tctttctccgcaacgtcgtagatgcggatcgccggtgttcgtgacatttccagtgaaatatgttggtttagatggaaagatttggaggccgaaagcgatg 1804464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 6476088 - 6476379
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  6476088 gttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 6476187  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||| |             |||||||||||||     
T  6476188 gtaaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggtggttcaatctcgccggaaaacggcgg------------ggaacttcaccacgg 6476275  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || |||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  6476276 tctttctccgcaacgtcgtagatgcggatcgccggtgttcgtgacatttccagtgaaatatgttggtttagatggaaagatttggaggccgaaagcgatg 6476375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 411 - 693
Target Start/End: Original strand, 22701534 - 22701805
Alignment:
Q  411 tacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagcgtaaatagtccctgttgtca 509  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |  ||||  ||||||||||||||||||||    
T  22701534 tacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttaatgtaaatagtccctgttgtca 22701633  T
Q  510 aatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacgatttttctccgcagcatcata 609  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||            |||||||| |||||| |||||||||||| || ||    
T  22701634 aatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcgga------------gaacttcagcacgatctttctccgcagcttcgta 22701721  T
Q  610 gatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatgatgt 693  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  22701722 gatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgatgatgt 22701805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 27377650 - 27377941
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  27377650 gttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 27377749  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||| |||| ||||||||||||||||||| |             |||||||||||||     
T  27377750 gtaaatagtccctgttatcaaatttctaacgtgatgtcaatgttggtggttcaatctcgccggaaaacggcgg------------ggaacttcaccacgg 27377837  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || |||||||||||||||||||||||| ||  ||||| ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  27377838 tctttctccgcaacgtcgtagatgcggatcgccggtgttcgtgacatttccaatgaaatatgttggtttagatggaaagatttggaggccgaaagcgatg 27377937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 39097045 - 39096752
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||| |||||||||    
T  39097045 gttaaatatgtttttggtccctacattttgcacgattttgagaataatccttacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 39096946  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||| |||||||||  |||| ||||||| || ||||||||| |||||          |||| ||||||||  |||||| |||||||||||    
T  39096945 gtaaatagtccctgctgtcaaattattaacttgatgccgatgttggcggttcaatct----------cggcggagaacttctctatgagcttcaccacga 39096856  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | ||||| |||||| || ||||   ||||||| |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  39096855 tctttcttcgcagcgtcgtagacatggatcgctggtgttcgtcacgcttccggtgaaaaatgttggtttagaggggaagatttggaggccgaaagcgatg 39096756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 385 - 509
Target Start/End: Original strand, 10708019 - 10708144
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaaattcctacatttttcgtcc 483  Q
    |||| ||||||||||||||| |||||||| |||||| |  |||||| || ||||| ||| |||||||||||||||||||||||||||||||||||| |||    
T  10708019 aaagggttaaatatgtttttggtccctacattttgccctcttttgacaaatagtccttacatttcaataaatgtttttaaaattcctacatttttcatcc 10708118  T
Q  484 gttagcgtaaatagtccctgttgtca 509  Q
    ||||||  ||||||||| ||||||||    
T  10708119 gttagcacaaatagtccatgttgtca 10708144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 382 - 479
Target Start/End: Original strand, 1804225 - 1804322
Alignment:
Q  382 tttaaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||| ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||    
T  1804225 tttaaagggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 1804322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 451 - 652
Target Start/End: Complemental strand, 38110435 - 38110246
Alignment:
Q  451 taaatgtttttaaaattcctacatttttcgtccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgcc 550  Q
    |||||||||| ||||| |||||||||||| ||||||||| |||||||||| ||||||||||| | ||||||||||||||| ||||||  | |||||| ||    
T  38110435 taaatgttttcaaaatccctacatttttcctccgttagcttaaatagtccatgttgtcaaatatttaacgtgatgccaatgttggcgaatcaatctcacc 38110336  T
Q  551 ggaaaacggcagagaactttcctatgaacttcaccacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatat 650  Q
    | ||||||||||             ||| |||| |||||| ||| |||||| | || |||||||||||| |||||||| |||||  ||||||||||||||    
T  38110335 gaaaaacggcag------------ggaatttcatcacgatctttttccgcatcgtcgtagatgcggatcaccggtgtttgtcacatttccagtgaaatat 38110248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 3854586 - 3854488
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||  || |||||||| |||||||||||||| |||||||||||  ||||||||    
T  3854586 gttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 3854488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 26525983 - 26525885
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| ||||||||| |||||||  |||||||||||||||||||||||||| |||||| ||||  ||||||||    
T  26525983 gttaaatatgtttttggtccctacattttgcgcgattttgataatagtccctatatttcaataaatgtttttaaaatccctacaatttttctccgttag 26525885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 390 - 479
Target Start/End: Complemental strand, 6476606 - 6476517
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||    
T  6476606 gttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 6476517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 12090214 - 12090116
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||| | |||||| |||||||||||||||||  || |||||||| |||||||||||||| |||||||||||  ||||||||    
T  12090214 gttaaatatgtttttggtccctgcattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 12090116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 39096525 - 39096623
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||  |||||  ||||||||||||||||| ||| ||||||||||||||||||||||| | |||||||||  ||||||||    
T  39096525 gttaaatatgtttttggtccctatattttgtgcgattttgagaatagtccttacatttcaataaatgtttttaaaatccatacattttttctccgttag 39096623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 385 - 479
Target Start/End: Original strand, 11450752 - 11450846
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    |||| ||||||||||||||| |||||||| |||| | |||||||||||||| ||  || ||||||||||||||||| ||||| ||||||||||||    
T  11450752 aaagggttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgttttaaaaatccctacatttttc 11450846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 390 - 479
Target Start/End: Complemental strand, 27378168 - 27378079
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||| ||  || ||||||||||||||||| ||||| ||||||||||||    
T  27378168 gttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgttttaaaaatccctacatttttc 27378079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 384 - 488
Target Start/End: Original strand, 34037804 - 34037908
Alignment:
Q  384 taaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtcc 483  Q
    ||||| |||||||| |||||| ||| |||  |||||| |||||||||||||||||  || |||||||| |||||||||||||| |||||||||||  |||    
T  34037804 taaagggttaaatacgtttttggtctctatattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctcc 34037903  T
Q  484 gttag 488  Q
    |||||    
T  34037904 gttag 34037908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 390 - 513
Target Start/End: Complemental strand, 44934772 - 44934648
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||| |   ||||| |  ||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||| ||    
T  44934772 gttaaatatgtttttggtccctacatttttcctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacatttttcatccgtcag 44934673  T
Q  489 cgtaaatagtccctgttgtcaaatt 513  Q
    |  ||||||||||||  ||||||||    
T  44934672 cacaaatagtccctgccgtcaaatt 44934648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 479
Target Start/End: Original strand, 10709467 - 10709566
Alignment:
Q  381 ttttaaagagttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    |||| ||| ||||||||||||||| |||  ||  ||||||  |||||||| |||||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  10709467 tttttaagggttaaatatgtttttggtctttagattttgcgtgattttgaagaatagtccttacatttcaataaatgtttttaaaatccctacatttttc 10709566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 44929976 - 44930107
Alignment:
Q  382 tttaaagagttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttttcg 480  Q
    ||||||| ||||||||||||||| |||||||| ||||     ||||| |  ||||||| ||| |||||||||||| |||||||||| |||||||||||      
T  44929976 tttaaagggttaaatatgtttttggtccctacattttttctcattttaattaatagtccttacatttcaataaatatttttaaaatccctacatttttta 44930075  T
Q  481 tccgttagcgtaaatagtccctgttgtcaaat 512  Q
    |||||||||  ||||||||||||  |||||||    
T  44930076 tccgttagcacaaatagtccctgccgtcaaat 44930107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 385 - 520
Target Start/End: Complemental strand, 18107519 - 18107383
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtcc 483  Q
    |||| ||||||||||||||| |||||| | ||||||  || ||| | ||||| || ||| |||| |||||||||||||||||| |||| ||||||| |||    
T  18107519 aaagggttaaatatgtttttagtccctgcattttgcgtgactttaaagaataatccttacattttaataaatgtttttaaaatccctaaatttttcctcc 18107420  T
Q  484 gttagcgtaaatagtccctgttgtcaaatttctaacg 520  Q
    |||| | ||||| || |||| | |||| |||||||||    
T  18107419 gttatcataaatggttcctgctatcaattttctaacg 18107383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 396 - 498
Target Start/End: Original strand, 18105723 - 18105826
Alignment:
Q  396 tatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagcgtaaa 494  Q
    ||||||||| |||||||  ||||   ||||||||| ||||| ||  || ||||||||||| |||||||||||||||||||||||| || |||||| ||||    
T  18105723 tatgtttttggtccctaaattttatgcgattttgaagaatattccctacatttcaataaaggtttttaaaattcctacatttttcctctgttagcataaa 18105822  T
Q  495 tagt 498  Q
    ||||    
T  18105823 tagt 18105826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 385 - 479
Target Start/End: Complemental strand, 39947180 - 39947085
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    |||| ||||||||||||||| |||||||| |||||   || |||||  ||||||| ||| ||||||||||||||||||||||| | ||||||||||    
T  39947180 aaagggttaaatatgtttttggtccctacattttgagtgactttgaacaatagtccttacatttcaataaatgtttttaaaatccgtacatttttc 39947085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 379 - 487
Target Start/End: Original strand, 23221824 - 23221933
Alignment:
Q  379 tattttaaagagttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttt 477  Q
    ||||| |||| |||||||||||| ||  ||||||| ||| |||||| ||||| |||||||   || |||||||||||||||||||| || ||||||||||    
T  23221824 tatttaaaagggttaaatatgttattgatccctacatttagcacgactttgaagaatagtacctacatttcaataaatgtttttaatatccctacatttt 23221923  T
Q  478 tcgtccgtta 487  Q
    |  |||||||    
T  23221924 tgctccgtta 23221933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 22704473 - 22704425
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtc 438  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||    
T  22704473 gttaaatatgtttttggtccctacattttgcgcgattttgagaatagtc 22704425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 444 - 479
Target Start/End: Complemental strand, 10710864 - 10710829
Alignment:
Q  444 atttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||||||||||||||||||||||||||||||    
T  10710864 atttcaataaatgtttttaaaattcctacatttttc 10710829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 471
Target Start/End: Complemental strand, 32861129 - 32861047
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaaattccta 471  Q
    ||||||||||||||| |||||| | |||||   || ||||| || ||||| ||||||||||||||||||||||||||| ||||    
T  32861129 gttaaatatgtttttggtccctgcattttgtgtgactttgaaaaatagtccttatatttcaataaatgtttttaaaatcccta 32861047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 385 - 489
Target Start/End: Original strand, 39945838 - 39945943
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtcc 483  Q
    |||| ||||||||||||||| ||||| || |||||   || |||||  ||||||| ||| ||||||||||||||||||||||| | || |||||||  ||    
T  39945838 aaagggttaaatatgtttttggtcccaacattttgagtgactttgaacaatagtccttacatttcaataaatgtttttaaaatccttatatttttccacc 39945937  T
Q  484 gttagc 489  Q
    ||||||    
T  39945938 gttagc 39945943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 467
Target Start/End: Original strand, 21182308 - 21182386
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaatt 467  Q
    ||||||||||||||| |||| ||| |||||| |   ||||| |||||||| ||| |||||| |||||||||||||||||    
T  21182308 gttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccttacatttcattaaatgtttttaaaatt 21182386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 466
Target Start/End: Original strand, 2191218 - 2191295
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaat 466  Q
    ||||||||||||||| |||| ||| |||||| |   ||||| |||||||| ||| |||||| ||||||||||||||||    
T  2191218 gttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccttacatttcattaaatgtttttaaaat 2191295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 201; Significance: 1e-109; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 29784467 - 29784163
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| |||||||||||| || ||||||    
T  29784467 gttaaatatgtttttggtccctacgttttgcacgattttgagaatagtctttacatttcaataaatatttttaaaatccctacatttttcctctgttagc 29784368  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgcc-ggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||| |||||| || | |||||||| |||||||| | ||||||||||||||||    
T  29784367 gtaaatagtctctgttgtcaagtttctaacgtgatgccaatgttggcggttcaatctcaccagaaaaacggcggagaacttccttatgaacttcaccacg 29784268  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    || |||||||||||| || |||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  29784267 atctttctccgcagcgtcgtagatgcggatcgccgttgttcgtcatgcttccggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgat 29784168  T
Q  689 gatgt 693  Q
    |||||    
T  29784167 gatgt 29784163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 383 - 693
Target Start/End: Original strand, 884676 - 884975
Alignment:
Q  383 ttaaagagttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgt 481  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |    
T  884676 ttaaagggttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 884775  T
Q  482 ccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaactt 581  Q
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||            ||||||    
T  884776 gagttagtgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcgga------------gaactt 884863  T
Q  582 caccacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccga 681  Q
    ||||||||| |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  884864 caccacgatctttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaggccga 884963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 28898549 - 28898257
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |  |||||    
T  28898549 gttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttag 28898450  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||            |||||||||||||    
T  28898449 tgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcgga------------gaacttcaccacg 28898362  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    || |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  28898361 atctttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgat 28898262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 383 - 693
Target Start/End: Original strand, 1244005 - 1244304
Alignment:
Q  383 ttaaagagttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgt 481  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |    
T  1244005 ttaaagggttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 1244104  T
Q  482 ccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaactt 581  Q
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||            ||||||    
T  1244105 gagttagtgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcgga------------gaactt 1244192  T
Q  582 caccacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccga 681  Q
    ||||||||| |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  1244193 caccacgatctttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttgatttagaggggaagatttggaggccga 1244292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 41298245 - 41298537
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |  |||||    
T  41298245 gttaaatatgtttttggtccctacattttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttag 41298344  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
     ||||||||||| |||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||   |||         |||||||||||||    
T  41298345 tgtaaatagtccttgttgttaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggc---gaa---------gaacttcaccacg 41298432  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    || |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||| |||    
T  41298433 atctttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaagccgaaagcgat 41298532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 18443177 - 18443470
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||||    
T  18443177 gttaaatatgtttttggtccctacattttgcacgattttgagaatagtccttacatttcaataaatgtttttaaaatccctacatttttcatccgttagc 18443276  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||| |||||||||  |||| ||||||| || ||||||||| |||||          |||| ||||||||  |||||| |||||||||||    
T  18443277 gtaaatagtccctgctgtcaaattattaacttgatgccgatgttggcggttcaatct----------cggcggagaacttctctatgagcttcaccacga 18443366  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||||| || ||||  | |||||| |||||||||||||||||| |||||| || ||||||||||||| ||||||||||||||||||| ||||    
T  18443367 tctttctccgcagcgtcgtagacacagatcgctggtgttcgtcacgcttccggtgaaaaatattggtttagaggggaagatttggaggccgaaagcgatg 18443466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 385 - 693
Target Start/End: Original strand, 33847862 - 33848158
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccg 484  Q
    |||| ||||||||||||||| |||||||  |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||  ||||    
T  33847862 aaagggttaaatatgtttttggtccctatattttacgcgattttgagaatagtctctacatttcaataaatgtttttaaaatccctacattttttctccg 33847961  T
Q  485 ttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcac 584  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||  ||| |||||| ||| |||||||| |             |||||||||    
T  33847962 ttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggttgttcaatctccccgaaaaacggcgg------------ggaacttcac 33848049  T
Q  585 cacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaag 684  Q
    |||||| |||||||||||| |  |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||| ||||||||||    
T  33848050 cacgatctttctccgcagcgttgtagatgcggatcgccggtgttcgtcacatttctagtgaaatatgttggtttagaggggaagatttgaaggccgaaag 33848149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 576 - 693
Target Start/End: Complemental strand, 22954391 - 22954274
Alignment:
Q  576 gaacttcaccacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttgga 675  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||  ||||||||||  |||||||||||||||||||||||||||| ||||||||||    
T  22954391 gaacttcaccacgatctttctccgcagcgtcgtagatgcggatcgccactgttcgtcacatttccagtgaaatatgttggtttagaggggaagatttgga 22954292  T
Q  676 ggccgaaagtgatgatgt 693  Q
    ||||||||| ||||||||    
T  22954291 ggccgaaagcgatgatgt 22954274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 29783936 - 29784034
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||  |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  29783936 gttaaatatgtttttagtccctacattttgtgcgattttgagaatagtccctatatttcaataaatgtttttaaaattcctacattttttctccgttag 29784034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 1244531 - 1244433
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||  || |||||||| |||||||||||||| |||||||||||  ||||||||    
T  1244531 gttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 1244433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 18443697 - 18443599
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||| ||| |||||| |||||||||||||||||  || ||||||||||||||||||||||| |||| ||||||| ||||||||    
T  18443697 gttaaatatgtttttggtccttacattttgcgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctatatttttcctccgttag 18443599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 28898030 - 28898128
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||  || |||||||| |||||||||||||| |||||||||||  ||||||||    
T  28898030 gttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 28898128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 41298764 - 41298666
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||  || |||||||| |||||||||||||| |||||||||||  ||||||||    
T  41298764 gttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 41298666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 33848385 - 33848287
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||| |||||||||  ||||||| |||| | ||||||| |||||||||  || |||||||||||||||||||||||||||||||||||| | ||||||    
T  33848385 gttaattatgtttttgttccctacattttacgcgattttaagaatagtccctacatttcaataaatgtttttaaaattcctacatttttcattcgttag 33848287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 390 - 479
Target Start/End: Original strand, 22954047 - 22954136
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||||||||| |||||||  ||||   | |||||||||||||||  || |||| |||||||||||||||||| ||||||||||||    
T  22954047 gttaaatatgtttttagtccctatattttatgcaattttgagaatagtccctacattttaataaatgtttttaaaatccctacatttttc 22954136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 389 - 474
Target Start/End: Complemental strand, 11974976 - 11974894
Alignment:
Q  389 agttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacat 474  Q
    |||||||||||||||| |||||||| ||||||  || ||    ||||||| ||  |||||||||||||||||||||||||||||||    
T  11974976 agttaaatatgtttttggtccctacattttgcgtgactta---aatagtctttgcatttcaataaatgtttttaaaattcctacat 11974894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 479
Target Start/End: Complemental strand, 30939653 - 30939563
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||||||||| |||||||| |||| | | |||| || ||||||||  || |||||| ||||| |||||||||| ||||||||||||    
T  30939653 gttaaatatgtttttagtccctacattttacgccatttcgaagaatagtccctacatttcattaaatatttttaaaatccctacatttttc 30939563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 466
Target Start/End: Original strand, 28838526 - 28838603
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttg-agaatagtcattatatttcaataaatgtttttaaaat 466  Q
    ||||||||||||||| |||||||| |||||||  |||||| | |||| || ||| |||| ||||||||||||||||||    
T  28838526 gttaaatatgtttttggtccctacattttgcatcattttgaaaaataatccttacattttaataaatgtttttaaaat 28838603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 20544398 - 20544322
Alignment:
Q  391 ttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaat 466  Q
    |||||||||||||| |||| ||  ||||||||  |||||| |||||||| ||| |||||| ||||||||||||||||    
T  20544398 ttaaatatgtttttagtccttatattttgcacctttttgaagaatagtccttacatttcattaaatgtttttaaaat 20544322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 478
Target Start/End: Complemental strand, 27311096 - 27311048
Alignment:
Q  430 agaatagtcattatatttcaataaatgtttttaaaattcctacattttt 478  Q
    |||||||||  || |||||| ||||||||||||||||||||||||||||    
T  27311096 agaatagtccctacatttcattaaatgtttttaaaattcctacattttt 27311048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 468
Target Start/End: Complemental strand, 49053796 - 49053717
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaaattc 468  Q
    ||||||||||||||| |||| ||| |||||   || ||||| || ||||||||  |||||||||||||||||||||||||    
T  49053796 gttaaatatgtttttggtccatacattttgggtgactttgaaaaatagtcattgcatttcaataaatgtttttaaaattc 49053717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 471
Target Start/End: Complemental strand, 23548923 - 23548841
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgatttt-gagaatagtcattatatttcaataaatgtttttaaaattccta 471  Q
    ||||||||| ||||| |||||||| ||||||  || ||| || ||||||  ||||||||||||||||  ||||||||||||||    
T  23548923 gttaaatatatttttggtccctacattttgcgtgactttagaaaatagttcttatatttcaataaatacttttaaaattccta 23548841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 33310283 - 33310239
Alignment:
Q  197 tcaattttagagatttgtcactctctttaatgatgtgacatgtgt 241  Q
    |||||||||| |||||||| ||||| ||||||||||| |||||||    
T  33310283 tcaattttagtgatttgtctctctcattaatgatgtgtcatgtgt 33310239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 180; Significance: 8e-97; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 45230130 - 45230422
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |  |||||    
T  45230130 gttaaatatgtttttggtccctacgttttgcactattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttag 45230229  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||            |||||||||||||    
T  45230230 tgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcgga------------gaacttcaccacg 45230317  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    || |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  45230318 atctttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgat 45230417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 30427674 - 30427966
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |  |||||    
T  30427674 gttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttag 30427773  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
     |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| ||||||| ||            |||||||||||||    
T  30427774 tgtaaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggcggttcaatctcgccgggaaacggcgga------------gaacttcaccacg 30427861  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    || |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  30427862 atctttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgat 30427961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 17968557 - 17968265
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |  |||||    
T  17968557 gttaaatatgtttttggtccatacgttttgcacgattttgagaattagtctttacatttcaataaatgtttttaaaatccctacatttttcctgagttag 17968458  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||| ||||| ||||||||||||||||||| ||            |||||||||||||    
T  17968457 cgtaaataatccctgttgtcaaatttctaacgtgatgtcaatgttgacggttcaatctcgccggaaaacggcgga------------gaacttcaccacg 17968370  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    || |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  17968369 atctttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgat 17968270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 47410942 - 47410651
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||  |||||||||    
T  47410942 gttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttagc 47410843  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||| |             ||||||||||||||    
T  47410842 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccgaaaaacggcgg------------ggaacttcaccacga 47410755  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || |||||||||||||||  ||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  47410754 tctttctccgcaacgtcgtagatgcggatcgccactgttcgtcacatttccagtgaaatatgttggtttagaggggaagatttggaggccgaaagcgatg 47410655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 32266484 - 32266775
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  32266484 gttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 32266583  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||| |||| |||||||| |||||||||| |             |||||||||||||     
T  32266584 gtaaatagtccttgttgtcaaatttctaacgtgatgtcaatgttggtggttcaatctcgctggaaaacggcgg------------ggaacttcaccacgg 32266671  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || ||||||||||||||| |||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  32266672 tctttctccgcaacgtcgtagatgcggatcgccagtgttcgtgacatttccagtgaaatatgttggtttagatggaaagatttggaggccgaaagcgatg 32266771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 40124077 - 40124368
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||| ||| |||| |  ||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  40124077 gttaaatatgtttttggtccttacattttacttgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 40124176  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||| |             |||||||||||||     
T  40124177 gtaaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggtggttcaatctcgccggaaaacggcgg------------ggaacttcaccacgg 40124264  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || ||||||| |||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  40124265 tctttctccgcaacgtcgtagatgcagatcgccggtgttcgtgacatttccagtgaaatatgttggtttagatggaaagatttggaggccgaaagcgatg 40124364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 9122686 - 9122977
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| ||||| || |||| | ||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||  |||||||||    
T  9122686 gttaaatatgtttttggtccccacattttacgcgattttgagaatagtccttacatttcaataaatgtttttaaaatccctacattttttctccgttagc 9122785  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| | |             ||||||||||||||    
T  9122786 gtaaatagtcactgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccgaaaaacgacgg------------ggaacttcaccacga 9122873  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | ||||||  |||| || |||||| ||||||||  ||||||||||  |||||||||||||||||||||||||||| |||||||||||||| |||| ||||    
T  9122874 tctttctctacagcgtcgtagatgtggatcgccactgttcgtcacatttccagtgaaatatgttggtttagaggggaagatttggaggccaaaagcgatg 9122973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 46802323 - 46802614
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| ||||| || |||| | |||||||||||||||||  || ||||||||||| ||||||||||| |||||||||||| || ||||||    
T  46802323 gttaaatatgtttttggtccccacattttacgcgattttgagaatagtccctacatttcaataaaagtttttaaaatccctacatttttcctctgttagc 46802422  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||| |             |||||||||||||     
T  46802423 gtaaatagtccctgttgtcaaatttttaacgtgatgccaatgttggcggttcaatctcgccggaaaatggcgg------------ggaacttcaccacgg 46802510  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || |||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||   ||||||||||||||||||| ||||    
T  46802511 tctttctccgcatcgtcgtagatgcggatcgccggttttcgtcacatttccactgaaatatgttggtttagagatgaagatttggaggccgaaagcgatg 46802610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 385 - 488
Target Start/End: Original strand, 17968033 - 17968136
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccg 484  Q
    |||| ||||||||||||||| |||||||| |||||| |||||||||||||||||  || |||||||| |||||||||||||| |||||||||||  ||||    
T  17968033 aaagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccg 17968132  T
Q  485 ttag 488  Q
    ||||    
T  17968133 ttag 17968136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 30428193 - 30428095
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||||   || |||||||| |||||||||||||| |||||||||||  ||||||||    
T  30428193 gttaaatatgtttttggtccctacattttgcgcgattttgagaatagttcctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 30428095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 45230649 - 45230551
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||  || |||||||| |||||||||||||| |||| ||||||  ||||||||    
T  45230649 gttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctatattttttctccgttag 45230551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 390 - 479
Target Start/End: Complemental strand, 32267002 - 32266913
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||| ||  || ||||||||||||||||||||||| ||||||||||||    
T  32267002 gttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 32266913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 390 - 479
Target Start/End: Original strand, 8997341 - 8997431
Alignment:
Q  390 gttaaatatgtttt-ttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    |||||||||||||| |||||||||  |||||  |||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||    
T  8997341 gttaaatatgtttttttgtccctatattttgtgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 8997431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 390 - 479
Target Start/End: Complemental strand, 9123204 - 9123115
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||||||||| |||||||| ||||   | |||||||||||||||  || ||||||||||||||||||||||| ||||||||||||    
T  9123204 gttaaatatgtttttggtccctacattttatgcaattttgagaatagtctctacatttcaataaatgtttttaaaatccctacatttttc 9123115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 390 - 479
Target Start/End: Complemental strand, 40124595 - 40124506
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||| ||||| |||||||| |||| | |||||||||||||| ||  || ||||||||||||||||||||||| ||||||||||||    
T  40124595 gttaaatatatttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 40124506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 384 - 488
Target Start/End: Complemental strand, 46802847 - 46802743
Alignment:
Q  384 taaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtcc 483  Q
    ||||| ||||||||||||||| |||||||| ||||  || ||||||| |||||||  || |||| |||||||||||||||||| |||||||||||| | |    
T  46802847 taaagggttaaatatgtttttggtccctacattttatacaattttgaaaatagtccctacattttaataaatgtttttaaaatccctacatttttccttc 46802748  T
Q  484 gttag 488  Q
    |||||    
T  46802747 gttag 46802743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 449 - 520
Target Start/End: Complemental strand, 8998264 - 8998193
Alignment:
Q  449 aataaatgtttttaaaattcctacatttttcgtccgttagcgtaaatagtccctgttgtcaaatttctaacg 520  Q
    |||||||||||||||||| |||||| ||||| | ||||||||||||||||| ||| ||||||||||||||||    
T  8998264 aataaatgtttttaaaatccctacagttttccttcgttagcgtaaatagtctctgctgtcaaatttctaacg 8998193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 47410424 - 47410522
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||  ||||   | |||||||||||||||  || ||||||||||||||||||||||| |||||||||||| | ||||||    
T  47410424 gttaaatatgtttttggtccctatattttatgcaattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttccttcgttag 47410522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 36793663 - 36793564
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||  ||||||  || ||||| ||||||||  || |||| |||||||||||||||||| |||||||||||  ||||||||    
T  36793663 gttaaatatgtttttagtccctatattttgcgtgactttgaagaatagtctctacattttaataaatgtttttaaaatccctacatttttattccgttag 36793564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 390 - 479
Target Start/End: Complemental strand, 1501070 - 1500980
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||||||||| |||||||  |||||| |  |||||| ||||||||  || |||||| |||||||||||||||| ||||||||||||    
T  1501070 gttaaatatgtttttagtccctatattttgcgctcttttgaagaatagtccctacatttcattaaatgtttttaaaatccctacatttttc 1500980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 37717884 - 37717808
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaat 466  Q
    ||||||||||||||| |||||||| |||| | | | ||||| ||||||| ||| ||||||||||| |||||||||||    
T  37717884 gttaaatatgtttttagtccctacattttacgcaactttgaaaatagtccttacatttcaataaaggtttttaaaat 37717808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 471
Target Start/End: Complemental strand, 3591253 - 3591171
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaaattccta 471  Q
    ||||||||||||||| |||||||| || |||  || ||||| || ||||| ||| ||||||||||||||||||||||| ||||    
T  3591253 gttaaatatgtttttggtccctacattgtgcgtgactttgaaaaatagtccttacatttcaataaatgtttttaaaatcccta 3591171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 444 - 513
Target Start/End: Original strand, 12868489 - 12868558
Alignment:
Q  444 atttcaataaatgtttttaaaattcctacatttttcgtccgttagcgtaaatagtccctgttgtcaaatt 513  Q
    |||||||||||| |||||||||| ||||||||| |  |||||||| |||||||||| ||| ||| |||||    
T  12868489 atttcaataaatatttttaaaatccctacatttatattccgttagggtaaatagtctctgctgttaaatt 12868558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 36792241 - 36792339
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||  || ||||| ||||||  |||||| | ||||| ||  |||||||||||||||| ||||||||| |||||||||||  ||||||||    
T  36792241 gttaaatatgttttaagttcctacattttgcgtgattttcaagaataatccctatatttcaataaatg-ttttaaaatccctacatttttactccgttag 36792339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 447
Target Start/End: Original strand, 42723124 - 42723182
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttg-agaatagtcattatattt 447  Q
    |||||||||||||||||||||||| ||||||  || |||| ||||||||| ||||||||    
T  42723124 gttaaatatgttttttgtccctacattttgcttgactttgaagaatagtctttatattt 42723182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 487
Target Start/End: Original strand, 45664688 - 45664786
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcac-gattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgtta 487  Q
    ||||||||||||||| |||||||| |||| | |  ||||  |||||||||  || |||| |||||||||||||||||| || ||||||||  |||||||    
T  45664688 gttaaatatgtttttagtccctacattttacgctcatttgaagaatagtctctacattttaataaatgtttttaaaatccccacatttttactccgtta 45664786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 176; Significance: 2e-94; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 43979558 - 43979850
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |  |||||    
T  43979558 gttaaatatgtttttggtccctatgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttag 43979657  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||            |||||||||||||    
T  43979658 tgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcgga------------gaacttcaccacg 43979745  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    || |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||  |||    
T  43979746 atctttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaggccgaaaacgat 43979845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 385 - 693
Target Start/End: Complemental strand, 12923167 - 12922870
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtcc 483  Q
    |||| ||| ||||||||||| |||||||| ||||| |||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |      
T  12923167 aaagggttcaatatgtttttggtccctacattttgtacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctga 12923068  T
Q  484 gttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttca 583  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||            ||||||||    
T  12923067 gttagtgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcgga------------gaacttca 12922980  T
Q  584 ccacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaa 683  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  12922979 ccacgatctttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaggccgaaa 12922880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 790415 - 790123
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||| |  |||||    
T  790415 gttaaatatgtttttggtccctaagttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaattcctacatttttcctgagttag 790316  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| ||            |||||||||||||    
T  790315 tgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaatggcgga------------gaacttcaccacg 790228  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    |  |||||||||||| || ||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  790227 aactttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttctggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgat 790128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 46263155 - 46262863
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |  |||||    
T  46263155 gttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttag 46263056  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| ||            |||||||||||||    
T  46263055 tgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaatggcgga------------gaacttcaccacg 46262968  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    |  |||||||||||| || ||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  46262967 aactttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttctggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgat 46262868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 382 - 693
Target Start/End: Original strand, 30545706 - 30546007
Alignment:
Q  382 tttaaagagttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcg 480  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||     
T  30545706 tttaaagggttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcc 30545805  T
Q  481 tcc-gttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaac 579  Q
    |   ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  ||            ||||    
T  30545806 ttgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggtgga------------gaac 30545893  T
Q  580 ttcaccacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggcc 679  Q
    ||||||||||| |||||| ||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| |    
T  30545894 ttcaccacgatctttctctgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaggtc 30545993  T
Q  680 gaaagtgatgatgt 693  Q
    ||||| ||||||||    
T  30545994 gaaagcgatgatgt 30546007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 1317061 - 1317353
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |  |||||    
T  1317061 gttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttag 1317160  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
     ||||||||||| | ||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||   |||         |||||||||||||    
T  1317161 tgtaaatagtccatattgtcaaatttctaacgtgatgccaatgttgacggttcaatctcgccggaaaacggc---gaa---------gaacttcaccacg 1317248  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    |  |||||||||||| || |||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  1317249 aactttctccgcagcttcgtagatgcggatcgccggtgttcctcacacttccggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgat 1317348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 28957830 - 28957539
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  28957830 gttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 28957731  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||| |             |||||||||||||     
T  28957730 gtaaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggtggttcaatctcgccggaaaacggcgg------------ggaacttcaccacgg 28957643  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || |||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  28957642 tctttctccgcaacgtcgtagatgcggatcgccggtgttcgtgacatttccagtgaaatatgttggtttagatggaaagatttggaggccgaaagcgatg 28957543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 28505210 - 28505502
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||||    
T  28505210 gttaaatatgtttttggtccctacattttgcacgattttgagaatagtccttacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 28505309  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||| |||||||||  |||| ||||||| || ||||||||| |||||          |||| ||||||||  |||| |||||||||||||    
T  28505310 gtaaatagtccctgctgtcaaattattaacttgatgccgatgttggcggttcaatct----------cggcggagaacttctctat-aacttcaccacga 28505398  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | ||||||||||||||| ||||  |||||||| |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  28505399 tctttctccgcagcatcgtagacacggatcgctggtgttcgtcacgcttccggtgaaaaatgttggtttagaggggaagatttggaggccgaaagcgatg 28505498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 31228398 - 31228107
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    |||||||||||||||  ||||||| |||| | ||||||||||||||||   || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  31228398 gttaaatatgtttttgatccctacattttacgcgattttgagaatagttcctacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 31228299  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||| |             |||||||||||||     
T  31228298 gtaaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggtggttcaatctcgccggaaaacggcgg------------ggaacttcaccacgg 31228211  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || |||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  31228210 tctttctccgcaacgtcgtagatgcggatcgccggtgttcgtgacatttccagtgaaatatgttggtttagatggaaagatttggaggccgaaagcgatg 31228111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 40841463 - 40841754
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| | ||||||| |||||||||  || ||||||||||||||||||||||| |||||||||||  |||||||||    
T  40841463 gttaaatatgtttttggtccctacattttacgcgattttaagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttagc 40841562  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||  |||||||||||||             ||||||| ||||||    
T  40841563 gtaaatagtccctgttgtcaagtttctaacgtgatgccaatgttggcggttcaatctcctcggaaaacggcag------------ggaacttcgccacga 40841650  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||||| || |||||||||||||||| ||||||||||  ||| |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  40841651 tctttctccgcagcgtcgtagatgcggatcgccgttgttcgtcacatttctagtgaaatatgttggtttagaggggaagatttggaggccgaaagcgatg 40841750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 21235029 - 21235322
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||||    
T  21235029 gttaaatatgtttttggtccctacattttgcacgattttgataatagtccttacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 21235128  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||| ||||| ||| ||||||||| ||||| ||||| | || ||||||||| |||||          |||| ||||||||  |||||| |||||||||||    
T  21235129 gtaagtagtctctgctgtcaaattactaacttgatgtcgatgttggcggttcaatct----------cggcggagaacttctctatgagcttcaccacga 21235218  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | ||||||||||| ||| ||||  | ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  21235219 tctttctccgcagtatcgtagacacagatcgtcggtgttcgtcacgcttccagtgaaatatgttggtttagaggggaagatttgagggccgaaagtgatg 21235318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 2669526 - 2669235
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||  |||||||||    
T  2669526 gttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttagc 2669427  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||  |||||||| |             ||||||||||||||    
T  2669426 gtaaatagtccatgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccaaaaaacggcgg------------ggaacttcaccacga 2669339  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||||| || || |||||||| |||  ||||||||||  |||||||||||||||||||||||||||| |||||||||||||| |||| ||||    
T  2669338 tctttctccgcagcgtcgtatatgcggattgccactgttcgtcacatttccagtgaaatatgttggtttagaggggaagatttggaggccaaaagcgatg 2669239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 38026195 - 38025904
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| || ||||| |||| | | |||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  38026195 gttaaatatgtttttggttcctacattttacgcaattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 38026096  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| |||||||| | |             ||||||||||||||    
T  38026095 gtaaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggcggttcaatctcgcaggaaaacgacgg------------ggaacttcaccacga 38026008  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||||  || ||||||| ||||||||||||| || ||  |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  38026007 tctttctccgcagtgtcgtagatgcagatcgccggtgtttgttacatttccagtgaaatatgttggtttagtggggaagatttggaggccgaaagcgatg 38025908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 391 - 693
Target Start/End: Original strand, 55347563 - 55347853
Alignment:
Q  391 ttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagcg 490  Q
    |||||||| ||||| |||||||| |||| | | |||||||||||||||  || |||| |||||||||||||||||| |||||||||||| ||| ||||||    
T  55347563 ttaaatatatttttggtccctacattttacgcaattttgagaatagtccctacattttaataaatgtttttaaaatccctacatttttcctccattagcg 55347662  T
Q  491 taaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacgat 590  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||| ||| |||||||| |             |||||||||||||||    
T  55347663 taaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggcggttcaatctccccgaaaaacggcgg------------ggaacttcaccacgat 55347750  T
Q  591 ttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatga 690  Q
     |||||||||||  || |||||||||||||||||||||||||||  ||| |||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  55347751 ctttctccgcagggtcgtagatgcggatcgccggtgttcgtcacatttctagtgaaatatcttggtttagaggggaagatttggaggccgaaagcgatga 55347850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 389 - 525
Target Start/End: Complemental strand, 12108378 - 12108242
Alignment:
Q  389 agttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||| || |||||||  ||||  ||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||  || |||||    
T  12108378 agttaaatatgttattggtccctaaattttatacgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctctgttag 12108279  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatg 525  Q
     ||||||||||| || |||||||||||||||| ||||    
T  12108278 tgtaaatagtccttgctgtcaaatttctaacgggatg 12108242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 385 - 488
Target Start/End: Complemental strand, 43980082 - 43979979
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccg 484  Q
    |||| ||||||||||||||| |||||||| |||||| |||||||||||||||||  || |||||||| |||||||||||||| |||||||||||  ||||    
T  43980082 aaagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccg 43979983  T
Q  485 ttag 488  Q
    ||||    
T  43979982 ttag 43979979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 12922643 - 12922741
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| | |||||||||||||||  || ||||||||||||||||||||||| |||||||||||  ||||||||    
T  12922643 gttaaatatgtttttggtccctacattttgcgcaattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttag 12922741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 21235548 - 21235451
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    |||||||||||||||  ||||||| |||||||||||||||| |||||||  || |||||||||||||||||||||||  ||||||||||| ||||||||    
T  21235548 gttaaatatgtttttc-tccctacattttgcacgattttgataatagtccctacatttcaataaatgtttttaaaatctctacatttttcctccgttag 21235451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 385 - 479
Target Start/End: Original strand, 28957307 - 28957401
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    |||| ||||||||||||||| |||||||| |||| | |||||||||||||| ||  || ||||||||||||||||||||||| ||||||||||||    
T  28957307 aaagggttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 28957401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 30546234 - 30546136
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||  || |||||||| ||| |||||||||| |||||||||||  ||||||||    
T  30546234 gttaaatatgtttttggtccctacattttgcgcgattttgagaatagtctctacatttcaatgaatatttttaaaatccctacattttttctccgttag 30546136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 390 - 479
Target Start/End: Original strand, 31227880 - 31227969
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||| ||  || ||||||||||||||||||||||| ||||||||||||    
T  31227880 gttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 31227969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 390 - 513
Target Start/End: Original strand, 47053762 - 47053886
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    |||||||||||| || |||||||| ||||||   ||||| |  ||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||||||    
T  47053762 gttaaatatgttattggtccctacattttgcctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacatttttcatccgttag 47053861  T
Q  489 cgtaaatagtccctgttgtcaaatt 513  Q
    |  ||||||||||||  ||||||||    
T  47053862 cacaaatagtccctgccgtcaaatt 47053886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 385 - 512
Target Start/End: Complemental strand, 47058601 - 47058473
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtcc 483  Q
    |||| ||||||||||||||| |||||||| ||||||   ||||| |  ||||||| ||| ||||||||||||||||||||||| |||||||||||  |||    
T  47058601 aaagggttaaatatgtttttggtccctacattttgcctcattttaattaatagtctttacatttcaataaatgtttttaaaatccctacattttttatcc 47058502  T
Q  484 gttagcgtaaatagtccctgttgtcaaat 512  Q
    ||||||  ||||||||||||  |||||||    
T  47058501 gttagcacaaatagtccctgccgtcaaat 47058473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 381 - 488
Target Start/End: Original strand, 54167486 - 54167594
Alignment:
Q  381 ttttaaagagttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    |||| ||| ||||||||||||||  |||||||| ||||||  |||||| | |||||||| ||||||||||||||||||||||||||| |||||||||||     
T  54167486 tttttaagggttaaatatgttttaagtccctacattttgcgtgattttcaagaatagtccttatatttcaataaatgtttttaaaatccctacattttta 54167585  T
Q  480 gtccgttag 488  Q
     ||||||||    
T  54167586 ctccgttag 54167594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 385 - 476
Target Start/End: Complemental strand, 1317585 - 1317494
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacattt 476  Q
    |||| ||||||||||||||| || ||||| |||||| ||||||||| |||||||  || |||||||| ||||||||||||||||||||||||    
T  1317585 aaagggttaaatatgtttttggttcctacattttgcgcgattttgaaaatagtccctacatttcaatgaatgtttttaaaattcctacattt 1317494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 789896 - 789994
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| | ||||||| |||||||  || |||||||| |||||||||||||| |||||||||||  ||||||||    
T  789896 gttaaatatgtttttggtccctacattttgcgcaattttgaaaatagtccatacatttcaatgaatgtttttaaaatccctacattttttctccgttag 789994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 40841981 - 40841883
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||| ||||||||| |||||||| |||| | ||||||| |||||||||  || ||||||||||||||||||||||| |||||||||||| | ||||||    
T  40841981 gttaattatgtttttggtccctacattttacgcgattttaagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcattcgttag 40841883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 46262636 - 46262734
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| | ||||||| |||||||  || |||||||| ||||||||||||||| ||||||||||  ||||||||    
T  46262636 gttaaatatgtttttggtccctacattttgcgcaattttgaaaatagtccctacatttcaatgaatgtttttaaaatttctacattttttctccgttag 46262734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 385 - 488
Target Start/End: Original strand, 2669003 - 2669106
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccg 484  Q
    |||| ||||||||||||||| |||| ||  ||||   | |||||||||||||||  || ||||||||||||||||||||||| |||||||||||| | ||    
T  2669003 aaagggttaaatatgtttttggtccttatattttatgcaattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttccttcg 2669102  T
Q  485 ttag 488  Q
    ||||    
T  2669103 ttag 2669106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 38025677 - 38025775
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||| ||| |||||||| |||| | | ||||||||||||||| ||| |||||||||||   ||||||||| |||||||||||| | ||||||    
T  38025677 gttaaatatgtctttggtccctacattttacgcaattttgagaatagtccttacatttcaataaaaaattttaaaatccctacatttttccttcgttag 38025775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 487
Target Start/End: Complemental strand, 49426449 - 49426343
Alignment:
Q  382 tttaaagagttaaatatgttttttgtccctacgttttgcacga-ttttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcg 480  Q
    ||||||| |||||||||||||||||||||||| |||||| | | |||  | ||||||| ||| |||||||||||| |||||||||| | |||||||| |     
T  49426449 tttaaagggttaaatatgttttttgtccctacattttgctctactttaaataatagtccttacatttcaataaatatttttaaaatccttacattttact 49426350  T
Q  481 tccgtta 487  Q
    |||||||    
T  49426349 tccgtta 49426343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 477
Target Start/End: Complemental strand, 55348051 - 55347970
Alignment:
Q  396 tatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttt 477  Q
    ||||||||| ||||| || |||| | ||||||| |||||||||  || ||||||||||||||||||||||| ||||||||||    
T  55348051 tatgtttttggtcccaacattttacgcgattttaagaatagtccctacatttcaataaatgtttttaaaatccctacatttt 55347970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 390 - 477
Target Start/End: Original strand, 54142326 - 54142414
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttt 477  Q
    |||||||||||| || |||||||| |||||| ||| ||||| ||||||||  || ||||||||||||||||||||||| | ||||||||    
T  54142326 gttaaatatgttattagtccctacattttgcgcgactttgaagaatagtccatacatttcaataaatgtttttaaaatccttacatttt 54142414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 385 - 487
Target Start/End: Original strand, 17287483 - 17287586
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtcc 483  Q
    |||| |||||||||||| || |||||||| |||||| | | ||| |  ||||||| ||| |||||||||||| ||||||||||||||||||||| | |||    
T  17287483 aaagggttaaatatgttattagtccctacattttgcgctactttaaataatagtccttacatttcaataaatatttttaaaattcctacattttacttcc 17287582  T
Q  484 gtta 487  Q
    ||||    
T  17287583 gtta 17287586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 477
Target Start/End: Original strand, 12107708 - 12107794
Alignment:
Q  391 ttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttt 477  Q
    |||||||||||||| |||||||| |||| | |||||||||||||| |   || |||| ||||||||||| |||||| ||||||||||    
T  12107708 ttaaatatgtttttggtccctacattttacgcgattttgagaataatacctacattttaataaatgtttctaaaatccctacatttt 12107794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 487
Target Start/End: Original strand, 49424452 - 49424553
Alignment:
Q  387 agagttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgt 485  Q
    |||||||||||| |||||| ||||||  |||||| | | |||||  ||||||| ||| || |||||||||||||||||||| |||||||||| | |||||    
T  49424452 agagttaaatatattttttatccctatattttgcgctactttgaataatagtctttacatatcaataaatgtttttaaaatccctacattttacttccgt 49424551  T
Q  486 ta 487  Q
    ||    
T  49424552 ta 49424553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 477
Target Start/End: Complemental strand, 17288462 - 17288374
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttt 477  Q
    |||||||||||| || |||||||| |||||| | | |||||  |||||||  || ||||||||||||||||||||||| ||||||||||    
T  17288462 gttaaatatgttattagtccctacattttgcgctactttgaataatagtccctacatttcaataaatgtttttaaaatccctacatttt 17288374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 477
Target Start/End: Complemental strand, 54143590 - 54143502
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttt 477  Q
    |||||||||||| || |||||||  |||||||||| ||||| ||||||||  || |||| |||||||||||||||||| | ||||||||    
T  54143590 gttaaatatgttattagtccctatattttgcacgactttgaagaatagtccctacattttaataaatgtttttaaaatccttacatttt 54143502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 390 - 464
Target Start/End: Complemental strand, 1791464 - 1791389
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaa 464  Q
    ||||||||||||||| | |||||||||||||  || ||||| || ||||| ||| |||||||||||||||||||||    
T  1791464 gttaaatatgtttttggcccctacgttttgcgtgactttgaaaaatagtccttacatttcaataaatgtttttaaa 1791389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 19893744 - 19893795
Alignment:
Q  186 ttagtcccacatcaattttagagatttgtcactctctttaatgatgtgacat 237  Q
    |||||||| |||||||||| | ||||||||||||||||||||| ||||||||    
T  19893744 ttagtcccccatcaattttggtgatttgtcactctctttaatgttgtgacat 19893795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 466
Target Start/End: Original strand, 10580041 - 10580118
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaaat 466  Q
    ||||||||||||||| |||| ||| ||||||  || ||||| || ||||| ||| |||||||||||||||||||||||    
T  10580041 gttaaatatgtttttggtccatacattttgcgtgactttgaaaaatagtccttacatttcaataaatgtttttaaaat 10580118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 471
Target Start/End: Complemental strand, 29691828 - 29691746
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacga-ttttgagaatagtcattatatttcaataaatgtttttaaaattccta 471  Q
    ||||||||||||||| |||| ||| ||||||  || |||  | ||||||| ||| ||||||||||||||||||||||| ||||    
T  29691828 gttaaatatgtttttggtccttacattttgcgtgactttaaaaaatagtctttacatttcaataaatgtttttaaaatcccta 29691746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 464
Target Start/End: Complemental strand, 35166782 - 35166708
Alignment:
Q  391 ttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaa 464  Q
    |||||||||| ||| |||||||| ||||  |||| ||||| |||||||| ||| |||| ||||||||||||||||    
T  35166782 ttaaatatgtctttcgtccctacattttatacgactttgaagaatagtccttacattttaataaatgtttttaaa 35166708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 464
Target Start/End: Original strand, 48554071 - 48554145
Alignment:
Q  391 ttaaatatgttttttgtccctacgttttgcacgattttg-agaatagtcattatatttcaataaatgtttttaaa 464  Q
    |||||||||||||| |||||||| ||||||  || |||| ||||||||| ||| |||| |||||||| |||||||    
T  48554071 ttaaatatgtttttggtccctacattttgcgtgactttgaagaatagtccttacattttaataaatgcttttaaa 48554145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 7118081 - 7118005
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaaat 466  Q
    ||||||||||||||| |||| ||| |||||| ||| ||||| || ||||| ||| ||||||||| |||||||||||||    
T  7118081 gttaaatatgtttttggtcc-tacattttgcgcgactttgaaaaatagtccttaaatttcaatacatgtttttaaaat 7118005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 385 - 468
Target Start/End: Complemental strand, 7118258 - 7118174
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattc 468  Q
    |||| ||||||||||||||| |||| ||| |||||| |   ||||| ||||||||  || |||||| ||||||||||||||||||    
T  7118258 aaagggttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccatacatttcattaaatgtttttaaaattc 7118174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 2e-94; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 27475818 - 27475526
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |  |||||    
T  27475818 gttaaatatgtttttggtccctaagttttacacgattttgagaattagtccttatatttcaataaatgtttttaaaatccctacatttttcctgagttag 27475719  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||            |||||||||||||    
T  27475718 tgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcgga------------gaacttcaccacg 27475631  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    || |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||||||||||||||||| |||    
T  27475630 atctttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttgatttagaggggaagatttggaggccgaaagcgat 27475531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 385 - 693
Target Start/End: Original strand, 22406838 - 22407135
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtcc 483  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |      
T  22406838 aaagggttaaatatgtttttggtccttacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctga 22406937  T
Q  484 gttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttca 583  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| ||            ||||||||    
T  22406938 gttagtgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaatggcgga------------gaacttca 22407025  T
Q  584 ccacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaa 683  Q
    ||||||  |||||||||||| || ||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  22407026 ccacgaactttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttctggtgaaatatgttggtttagaggggaagatttggaggccgaaa 22407125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 34950276 - 34949984
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |  |||||    
T  34950276 gttaaatatgtttttggtccctacgttttgcacaattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttag 34950177  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
     |||||||||||||||||||||||||||||| |||||||||| ||||||||  |||||| |||||||||||| ||            |||||||||||||    
T  34950176 tgtaaatagtccctgttgtcaaatttctaacatgatgccaatgttggcggtccaatctccccggaaaacggcgga------------gaacttcaccacg 34950089  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    || |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  34950088 atctttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgat 34949989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 42606281 - 42606572
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||| ||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||  |||||||||    
T  42606281 gttaaatttgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttagc 42606380  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |             ||||||||||||||    
T  42606381 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcgg------------ggaacttcaccacga 42606468  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||||| || |||||||||||||||  ||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  42606469 tctttctccgcagcgtcgtagatgcggatcgccactgttcgtcacatttccagtgaaatatgttggtttagaggggaagatttggaggccgaaagcgatg 42606568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 385 - 693
Target Start/End: Complemental strand, 45539733 - 45539437
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccg 484  Q
    |||| ||||||||||||||| |||||||| |||| | ||||||| |||||||||  || ||||||||||||||||||||||| |||||||||||  ||||    
T  45539733 aaagggttaaatatgtttttggtccctacattttacgcgattttaagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccg 45539634  T
Q  485 ttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcac 584  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||             |||||||||    
T  45539633 ttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctccccggaaaacggcag------------ggaacttcac 45539546  T
Q  585 cacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaag 684  Q
    |||||| |||||||||||| || |||||||||||||||| ||||||||||  ||| |||||||||||||||||||||||| |||||||||||||||||||    
T  45539545 cacgatctttctccgcagcgtcgtagatgcggatcgccgttgttcgtcacatttctagtgaaatatgttggtttagaggggaagatttggaggccgaaag 45539446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 4199454 - 4199747
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  4199454 gttaaatatgtttttggtccctacattttgcacgattttgagaatagtccttatatttcaataaatgtttttaaaatccctacatttttcatccgttagc 4199553  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||| |||||||||  |||| ||||||| || ||||||||| |||||          |||| ||||||||  |||||| |||||||||||    
T  4199554 gtaaatagtccctgctgtcaaattattaacttgatgccgatgttggcggttcaatct----------cggcggagaacttctctatgagcttcaccacga 4199643  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||||| || ||||  | |||||| |||||||||||||||||| |||||| || ||||||||||||| ||||||||||||||||||| ||||    
T  4199644 tctttctccgcagcgtcgtagacacagatcgctggtgttcgtcacgcttccggtgaaaaatattggtttagaggggaagatttggaggccgaaagcgatg 4199743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 393 - 693
Target Start/End: Original strand, 2388636 - 2388924
Alignment:
Q  393 aaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagcgta 492  Q
    |||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||  ||||||||| ||    
T  2388636 aaatatgtttttggtccctacattttacgcgattttgagaatagtctctacatttcaataaatgtttttaaaatccctacattttttctccgttagctta 2388735  T
Q  493 aatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacgattt 592  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||| |             ||||||||||||||| |    
T  2388736 aatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccgaaaaacggcgg------------ggaacttcaccacgatct 2388823  T
Q  593 ttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatgatg 692  Q
    ||||||||||| || |||||||||||||||   |||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  2388824 ttctccgcagcgtcgtagatgcggatcgccaccgttcgtcacatttccagtgaaatatgttggtttagaggggaagatttggaggccgaaagcgatgatg 2388923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 36899255 - 36899546
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||  ||||||||     
T  36899255 gttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttagt 36899354  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| |||||||| ||            ||| ||||||||||    
T  36899355 gtaaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggcggttcaatctcgccgaaaaacggcgga------------gaatttcaccacga 36899442  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | ||||||| |||| || |||||||||||| ||  ||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  36899443 tctttctcctcagcgtcgtagatgcggatcaccactgttcgtcacatttccagtgaaatatgttggtttagaggggaagatttggaggccgaaagcgatg 36899542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 385 - 693
Target Start/End: Original strand, 46689678 - 46689974
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccg 484  Q
    |||| ||||||||||||||| || ||||| ||||   |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| ||||    
T  46689678 aaagggttaaatatgtttttggttcctacattttatgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccg 46689777  T
Q  485 ttagcgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcac 584  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||| |             |||||||||    
T  46689778 ttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggtggttcaatctcgccggaaaacggcgg------------ggaacttcac 46689865  T
Q  585 cacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaag 684  Q
    |||| | ||||||||||   || |||||||||||||||||||||||| ||  ||||| ||||||||||||||||||| ||||||||||||||| ||||||    
T  46689866 cacggtctttctccgcaatgtcgtagatgcggatcgccggtgttcgtgacatttccaatgaaatatgttggtttagatggaaagatttggaggtcgaaag 46689965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 4199974 - 4199876
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||  || ||||||||||||||||||||||| |||| ||||||| ||||||||    
T  4199974 gttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctatatttttcctccgttag 4199876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 34949757 - 34949855
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||  || |||||||| |||||||||||||| |||||||||||  ||||||||    
T  34949757 gttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 34949855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 390 - 479
Target Start/End: Complemental strand, 46690201 - 46690112
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||| ||  || ||||||||||||||||||||||| ||||||||||||    
T  46690201 gttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 46690112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 390 - 474
Target Start/End: Original strand, 27475391 - 27475475
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacat 474  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||  || |||||||| |||||||||||||| |||||||    
T  27475391 gttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacat 27475475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 384 - 488
Target Start/End: Original strand, 45539204 - 45539308
Alignment:
Q  384 taaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtcc 483  Q
    ||||| ||||| ||||||||| |||||||| |||| | ||||||| |||||||||  || ||||||||||||||||||||||| |||||||||||| | |    
T  45539204 taaagggttaattatgtttttggtccctacattttacgcgattttaagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcattc 45539303  T
Q  484 gttag 488  Q
    |||||    
T  45539304 gttag 45539308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 385 - 488
Target Start/End: Complemental strand, 22407367 - 22407264
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccg 484  Q
    |||| ||||||||||||||| |||||||| |||||| | ||||||| |||||||  || |||||||| |||||||||||||| |||||||||||  ||||    
T  22407367 aaagggttaaatatgtttttggtccctacattttgcgcaattttgaaaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccg 22407268  T
Q  485 ttag 488  Q
    ||||    
T  22407267 ttag 22407264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 20826723 - 20826853
Alignment:
Q  384 taaagagttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtc 482  Q
    ||||| ||||||||||||||| |||||||| |||| |   ||||| |  ||||||| ||| ||||||||||||||||||||||| |||||||||||| ||    
T  20826723 taaagggttaaatatgtttttggtccctacatttttcctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacatttttcatc 20826822  T
Q  483 cgttagcgtaaatagtccctgttgtcaaatt 513  Q
    ||| |||  ||||||||||||  ||||||||    
T  20826823 cgtcagcacaaatagtccctgccgtcaaatt 20826853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 444 - 520
Target Start/End: Original strand, 35300800 - 35300876
Alignment:
Q  444 atttcaataaatgtttttaaaattcctacatttttcgtccgttagcgtaaatagtccctgttgtcaaatttctaacg 520  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||  |||| ||||||| |||||| |||||||||    
T  35300800 atttcaataaatgtttttaaaatccctacatttttcatccgttagcacaaatggtccctggtgtcaattttctaacg 35300876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 42606799 - 42606701
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| ||||   | |||||||||||||||  || |||||||||||| |||||||||| |||||||||||| | ||||||    
T  42606799 gttaaatatgtttttggtccctacattttatgcaattttgagaatagtccctacatttcaataaatatttttaaaatccctacatttttccttcgttag 42606701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 432 - 512
Target Start/End: Complemental strand, 20831147 - 20831067
Alignment:
Q  432 aatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagcgtaaatagtccctgttgtcaaat 512  Q
    ||||||| ||| ||||||||||||||||||||||| |||||||||||  |||||||||  ||||||||||||  |||||||    
T  20831147 aatagtccttacatttcaataaatgtttttaaaatccctacattttttatccgttagcacaaatagtccctgccgtcaaat 20831067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 2389151 - 2389053
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||  ||||   | |||||||||||||||  || |||| |||||||||||||||||| |||||||||||| | ||||||    
T  2389151 gttaaatatgtttttggtccctatattttatgcaattttgagaatagtccctacattttaataaatgtttttaaaatccctacatttttccttcgttag 2389053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 36899773 - 36899675
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||  ||||   | |||||||||||||||  || ||||||||||||||||||||||| |||| ||||||| | ||||||    
T  36899773 gttaaatatgtttttggtccctatattttatgcaattttgagaatagtccctacatttcaataaatgtttttaaaatccctatatttttccttcgttag 36899675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 384 - 477
Target Start/End: Complemental strand, 48868682 - 48868588
Alignment:
Q  384 taaagagttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttt 477  Q
    ||||| |||||||||||| || |||||||| |||||| | | |||||  |||||||  || ||||||||||||||||||||||| ||||||||||    
T  48868682 taaagggttaaatatgttattagtccctacattttgcgctactttgaataatagtccctacatttcaataaatgtttttaaaatccctacatttt 48868588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 430 - 486
Target Start/End: Original strand, 54588499 - 54588555
Alignment:
Q  430 agaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgtt 486  Q
    |||||||||  || |||||||||||||||||||||||||||||||||| | ||||||    
T  54588499 agaatagtccatacatttcaataaatgtttttaaaattcctacattttacctccgtt 54588555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 471
Target Start/End: Original strand, 25770495 - 25770577
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaaattccta 471  Q
    |||||||||||||||  ||| ||| ||||||  |||||||| || ||||| ||| ||||||||||||||||||||||| ||||    
T  25770495 gttaaatatgtttttaatccttacattttgcgtgattttgaaaaatagtctttacatttcaataaatgtttttaaaatcccta 25770577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 513
Target Start/End: Complemental strand, 35301931 - 35301858
Alignment:
Q  440 ttatatttcaataaatgtttttaaaattcctacatttttcgtccgttagcgtaaatagtccctgttgtcaaatt 513  Q
    ||||||||| |||||| ||||||||||||||| ||||||  || ||||||  ||||||||||||  ||||||||    
T  35301931 ttatatttcgataaatatttttaaaattcctatattttttctcagttagcacaaatagtccctgccgtcaaatt 35301858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 478
Target Start/End: Original strand, 51587571 - 51587619
Alignment:
Q  430 agaatagtcattatatttcaataaatgtttttaaaattcctacattttt 478  Q
    ||||||||||||| |||||||||||| |||||||||| |||| ||||||    
T  51587571 agaatagtcattacatttcaataaatatttttaaaatccctatattttt 51587619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 132154 - 132071
Alignment:
Q  384 taaagagttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaat 466  Q
    ||||| ||||||||||| ||| |||| ||| ||||||||   ||||| |||||||| ||| |||||| ||||||||||||||||    
T  132154 taaagggttaaatatgtatttagtccttacattttgcactcctttgaagaatagtccttacatttcattaaatgtttttaaaat 132071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 7248523 - 7248468
Alignment:
Q  444 atttcaataaatgtttttaaaattcctacatttttcgtccgttagcgtaaatagtc 499  Q
    |||| ||||||| |||||||||| ||||||||||||  |||||||| |||||||||    
T  7248523 attttaataaatatttttaaaatccctacatttttctgccgttagcataaatagtc 7248468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 22909134 - 22909075
Alignment:
Q  192 ccacatcaattttagagatttgtcactctctttaatgatgtgacatgtgtgtgttggttt 251  Q
    |||||||||||||   |||||||||||||  |||||||| |||||| |||||||||||||    
T  22909134 ccacatcaattttgatgatttgtcactcttattaatgatatgacatatgtgtgttggttt 22909075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 463
Target Start/End: Original strand, 27013582 - 27013657
Alignment:
Q  389 agttaaatatgttttttgtccctacgttttgcacgattttg-agaatagtcattatatttcaataaatgtttttaa 463  Q
    |||||||||||||||| |||| ||| ||||||  ||||||| ||||||||| ||| |||| |||| ||||||||||    
T  27013582 agttaaatatgtttttggtccttacattttgcgtgattttgaagaatagtccttacattttaatatatgtttttaa 27013657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 44504475 - 44504398
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaat 466  Q
    ||||||| ||||||| |||| ||| ||||||||   ||||| |||||||| ||| |||||| ||||||||||||||||    
T  44504475 gttaaatgtgtttttagtccttacattttgcacccctttgaagaatagtccttacatttcattaaatgtttttaaaat 44504398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 172; Significance: 5e-92; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 3878773 - 3879065
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||| ||||||| |  |||||    
T  3878773 gttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctatatttttcctgagttag 3878872  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||            |||||||||||||    
T  3878873 tgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcgga------------gaacttcaccacg 3878960  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    || |||||||||||| || |||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  3878961 atctttctccgcagcttcgtagatgcggatcgccggtgttcatcacacttccggtgaaatatgttgatttagaggggaagatttggaggctgaaagtgat 3879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 31092996 - 31093288
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| |||| ||| ||||||||| ||||||||||||| |||||||||||| |  |||||    
T  31092996 gttaaatatgtttttggtcccaacgttttgcacgattttgagaattagtccttacatttcaatagatgtttttaaaatccctacatttttcttgagttag 31093095  T
Q  489 cgtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacg 588  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||            |||||||||||||    
T  31093096 tgtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcgga------------gaacttcaccacg 31093183  T
Q  589 atttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgat 688  Q
    |  |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||| |||    
T  31093184 aactttctccgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttgaaggccgaaagcgat 31093283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 21949401 - 21949692
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  21949401 gttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 21949500  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| |             ||||||||||||||    
T  21949501 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatgttggcggttcaatctccccggaaaacggcgg------------ggaacttcaccacga 21949588  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||||| || |||||||| ||||||| ||||||||||  ||| |||||||||||||||||||||||| |||||||||||| |||||| ||||    
T  21949589 tctttctccgcagcgtcgtagatgcgaatcgccgctgttcgtcacatttctagtgaaatatgttggtttagaggggaagatttggaggtcgaaagcgatg 21949688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 5747280 - 5746989
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  5747280 gttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 5747181  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||| |||| ||||||||||||||||||| |             |||||||||||||     
T  5747180 gtaaatagtccctgttatcaaatttctaacgtgatgtcaatgttggtggttcaatctcgccggaaaacggcgg------------ggaacttcaccacgg 5747093  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || |||||||||||||||||||||||| ||  ||||| ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  5747092 tctttctccgcaacgtcgtagatgcggatcgccggtgttcgtgacatttccaatgaaatatgttggtttagatggaaagatttggaggccgaaagcgatg 5746993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 28641680 - 28641389
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||| ||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  28641680 gttaaatatgtgtttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 28641581  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||| |||| ||||||||||||||||||| |             |||||||||||||     
T  28641580 gtaaatagtccctgttgtcaaatttctaatgtgatgtcaatgttggtggttcaatctcgccggaaaacggcgg------------ggaacttcaccacgg 28641493  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || |||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  28641492 tctttctccgcaacgtcgtagatgcggatcgccggtgttcgtgacatttccagtgaaatatgttggtttagatggaaagatttggaggccgaaagcgatg 28641393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 6543416 - 6543707
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  6543416 gttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 6543515  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||| |||| |||||||| |||||||||| |             |||||||||||||     
T  6543516 gtaaatagtccttgttgtcaaatttctaacgtgatgtcaatgttggtggttcaatctcgctggaaaacggcgg------------ggaacttcaccacgg 6543603  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || ||||||||||||||| |||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  6543604 tctttctccgcaacgtcgtagatgcggatcgccagtgttcgtgacatttccagtgaaatatgttggtttagatggaaagatttggaggccgaaagcgatg 6543703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 31162422 - 31162713
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| |  ||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  31162422 gttaaatatgtttttggtccctacattttacgtgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 31162521  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||| |             |||||||||||||     
T  31162522 gtaaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggtggttcaatctcgccggaaaacggcgg------------ggaacttcaccacgg 31162609  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || ||||||| ||||| |||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  31162610 tctttctccgcaacgtcgtagatgcagatcgtcggtgttcgtgacatttccagtgaaatatgttggtttagatggaaagatttggaggccgaaagcgatg 31162709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 390 - 693
Target Start/End: Original strand, 3191799 - 3192092
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||||    
T  3191799 gttaaatatgtttttagtccctacattttgcacgattttgagaatagtccttacatttcaataaatgtttttaaaatccctacatttttcctccgttagc 3191898  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||| |||||||||  |||| ||||||| || ||||||||| |||||          |||| ||||||||  |||||| ||| ||||| |    
T  3191899 gtaaatagtccctgctgtcaaattattaacttgatgccgatgttggcggttcaatct----------cggcggagaacttctctatgagctttaccacaa 3191988  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | ||||| |||||| || ||||   |||||||||||||| ||||||||||| |||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  3191989 tctttcttcgcagcgtcgtagacatggatcgccggtgtttgtcacgcttccggtgaaaaatgttggtttagaggggaagatttggaggccgaaagcgatg 3192088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 39402733 - 39402440
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||| ||| |||||||||||| |||||||||| |||||||||||| |||| ||||    
T  39402733 gttaaatatgtttttggtccctacattttacacgattttgagaatagtccttacatttcaataaatatttttaaaatccctacatttttcctccggtagc 39402634  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||| ||||||||| ||||| ||||||| || ||||||||| |||||          |||| ||||||||  |||||| |||||||||||    
T  39402633 gtaaatagtccctgctgtcaaattactaacttgatgccgatgttggcggttcaatct----------cggcggagaacttcactatgagcttcaccacga 39402544  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||| |||   || ||||  ||||||| ||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  39402543 tctttctctgcaatgtcgtagacacggatcgtcggtgttcgtcacgctttcggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgatg 39402444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 385 - 488
Target Start/End: Original strand, 39402208 - 39402311
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccg 484  Q
    |||| ||||||||||||||| |||||||| |||||| |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| ||||    
T  39402208 aaagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccg 39402307  T
Q  485 ttag 488  Q
    ||||    
T  39402308 ttag 39402311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 385 - 488
Target Start/End: Complemental strand, 3192324 - 3192221
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccg 484  Q
    |||| ||||||||||||||| |||||||  |||||  ||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||  ||||    
T  3192324 aaagggttaaatatgtttttggtccctatattttgtgcgattttgagaatagtccttacatttcaataaatgtttttaaaatccctacattttttctccg 3192225  T
Q  485 ttag 488  Q
    ||||    
T  3192224 ttag 3192221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 390 - 479
Target Start/End: Complemental strand, 31162940 - 31162851
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||    
T  31162940 gttaaatatgtttttggtccctacattttacgcgattttgagaataatccttacatttcaataaatgtttttaaaatccctacatttttc 31162851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 390 - 512
Target Start/End: Original strand, 19352300 - 19352423
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| || ||||| |||| | |  |||||| || ||||| ||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  19352300 gttaaatatgtttttggttcctacattttacccttttttgacaaatagtccttacatttcaataaatgtttttaaaattcttacatttttcctccgttag 19352399  T
Q  489 cgtaaatagtccctgttgtcaaat 512  Q
    |  |||||||||||| ||||||||    
T  19352400 cacaaatagtccctgctgtcaaat 19352423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 385 - 479
Target Start/End: Original strand, 28641157 - 28641251
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    |||| ||||||||||||||| |||||||| |||| | |||||||||||||| ||  || ||||||||||||||||||||||| ||||||||||||    
T  28641157 aaagggttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 28641251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 31093515 - 31093417
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| ||||||||| |||||||  || |||||||| |||||||||||||| |||||||||||  ||||||||    
T  31093515 gttaaatatgtttttggtccctacattttgcgcgattttgaaaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 31093417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 383 - 479
Target Start/End: Original strand, 5746755 - 5746851
Alignment:
Q  383 ttaaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    |||||| ||||||||||||||| |||||||| |||| | |||||||||||||| ||  || ||||||||||||||||| ||||| ||||||||||||    
T  5746755 ttaaagggttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgttttaaaaatccctacatttttc 5746851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 390 - 512
Target Start/End: Complemental strand, 120047 - 119924
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| |   |||||  ||||||| ||| ||||||||||||||||||||||| | |||||||||| ||||||||    
T  120047 gttaaatatgtttttggtccctacattttgcccttctttgacaaatagtccttacatttcaataaatgtttttaaaatccttacatttttcctccgttag 119948  T
Q  489 cgtaaatagtccctgttgtcaaat 512  Q
    |  |||||||| ||| ||||||||    
T  119947 cacaaatagtctctgctgtcaaat 119924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 385 - 519
Target Start/End: Original strand, 14625118 - 14625252
Alignment:
Q  385 aaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccg 484  Q
    |||| ||||||||||||||| |||||||| |||| | | ||||| |  ||||||  || |||| |||||||||||||||||| |||||||||||| ||||    
T  14625118 aaagggttaaatatgtttttggtccctacattttacgcaattttaaatatagtccataaattttaataaatgtttttaaaatccctacatttttcctccg 14625217  T
Q  485 ttagcgtaaatagtccctgttgtcaaatttctaac 519  Q
    ||| | ||||||||| | | |||||| ||||||||    
T  14625218 ttatcataaatagtctccggtgtcaattttctaac 14625252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 390 - 479
Target Start/End: Complemental strand, 21949919 - 21949830
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||| ||||||||| |||||||| |||| | ||||||| |||||||||  || ||||||||||||||||||||||| ||||||||||||    
T  21949919 gttaattatgtttttggtccctacattttacgcgattttaagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 21949830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 479
Target Start/End: Complemental strand, 6543940 - 6543845
Alignment:
Q  383 ttaaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    |||||| ||||||||||||||| |||| ||| |||| | |||||||||||||| ||  || ||||||||||||||||||||||| ||||||||||||    
T  6543940 ttaaagggttaaatatgtttttggtcc-tacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 6543845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 390 - 512
Target Start/End: Original strand, 119011 - 119134
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| |   ||| | || ||||| ||| ||||||||||||||||||||||| |||||||||||| |||| |||    
T  119011 gttaaatatgtttttggtccctacattttgccctcctttaataaatagtccttacatttcaataaatgtttttaaaatccctacatttttcctccgatag 119110  T
Q  489 cgtaaatagtccctgttgtcaaat 512  Q
    |  |||||||| ||| ||||||||    
T  119111 cacaaatagtctctgctgtcaaat 119134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 3879292 - 3879194
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||| ||||| |||||||| |||||| |||||||||||||| ||  || |||||||| |||||||||||||| |||| ||||||  ||||||||    
T  3879292 gttaaatatatttttggtccctacattttgcgcgattttgagaataatccctacatttcaatgaatgtttttaaaatccctatattttttctccgttag 3879194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 384 - 489
Target Start/End: Complemental strand, 718319 - 718213
Alignment:
Q  384 taaagagttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtc 482  Q
    ||||| ||||||||||||||| || ||||| |||||||  |||||||  ||||||  ||| ||||||||||||||||||||||| ||| |||||||  ||    
T  718319 taaagggttaaatatgtttttggttcctacattttgcataattttgaataatagttcttacatttcaataaatgtttttaaaatccctgcatttttgctc 718220  T
Q  483 cgttagc 489  Q
    |||||||    
T  718219 cgttagc 718213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 430 - 513
Target Start/End: Complemental strand, 30351752 - 30351669
Alignment:
Q  430 agaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagcgtaaatagtccctgttgtcaaatt 513  Q
    |||||||||  || |||||||||||| ||||||||||||||||||||||  |  |||||| ||||||||||||| ||| |||||    
T  30351752 agaatagtccctacatttcaataaatatttttaaaattcctacatttttattttgttagcataaatagtccctgctgttaaatt 30351669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 381 - 476
Target Start/End: Original strand, 119176 - 119272
Alignment:
Q  381 ttttaaagagttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacattt 476  Q
    |||| ||| ||||||||||||||| |||| ||  ||||||  || ||| | |||||||| ||| ||||||||||||||||||||||| |||||||||    
T  119176 tttttaagggttaaatatgtttttggtccttagattttgcgtgactttaaagaatagtccttacatttcaataaatgtttttaaaatccctacattt 119272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 432 - 500
Target Start/End: Complemental strand, 19353284 - 19353216
Alignment:
Q  432 aatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagcgtaaatagtcc 500  Q
    ||||||| ||| ||||||||||| ||||||||||| | |||||||||| |||||||||  |||||||||    
T  19353284 aatagtccttacatttcaataaacgtttttaaaatccatacatttttcctccgttagcacaaatagtcc 19353216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 381 - 479
Target Start/End: Complemental strand, 19353167 - 19353068
Alignment:
Q  381 ttttaaagagttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    |||| ||| ||||||||||||||| |||| ||  |||||   || ||||| |||||||| | | ||||||||||||||||||||||| ||||||||||||    
T  19353167 tttttaagggttaaatatgtttttggtccttagattttgtgtgactttgaagaatagtcctcacatttcaataaatgtttttaaaatccctacatttttc 19353068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 487
Target Start/End: Original strand, 4186755 - 4186853
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgtta 487  Q
    |||||||||||| ||  ||||||| ||| |||||| ||||| |||||||   || |||||||||||||||||||| || |||||||||||  |||||||    
T  4186755 gttaaatatgttattgatccctacatttagcacgactttgaagaatagtacctacatttcaataaatgtttttaatatccctacatttttgctccgtta 4186853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 503
Target Start/End: Complemental strand, 14626178 - 14626064
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||   ||||| ||| ||| | || |||||  || ||||||||||||||||||||||| |||||||||||  || ||||     
T  14626178 gttaaatatgtttttggtccctatactttgcgcgactttaaaaaatagtccctacatttcaataaatgtttttaaaatccctacattttttatctgttat 14626079  T
Q  489 cgtaaatagtccctg 503  Q
    | ||||| |||||||    
T  14626078 cataaatggtccctg 14626064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 430 - 479
Target Start/End: Original strand, 19352513 - 19352562
Alignment:
Q  430 agaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||| ||  ||||||||||||||||||||||| ||||||||||||    
T  19352513 agaatagtccttgcatttcaataaatgtttttaaaatccctacatttttc 19352562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 479
Target Start/End: Original strand, 37813375 - 37813466
Alignment:
Q  389 agttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    |||||||||| ||||| ||||||||  ||| | | ||||||| ||||||||  || |||||| ||| ||||||||||||||||| |||||||    
T  37813375 agttaaatatatttttagtccctacagtttacgccattttgaagaatagtccatacatttcattaagtgtttttaaaattcctaaatttttc 37813466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 476
Target Start/End: Complemental strand, 119832 - 119786
Alignment:
Q  430 agaatagtcattatatttcaataaatgtttttaaaattcctacattt 476  Q
    ||||||||| ||  ||||||||||||||||||||||| |||||||||    
T  119832 agaatagtccttgcatttcaataaatgtttttaaaatccctacattt 119786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 471
Target Start/End: Complemental strand, 3406774 - 3406692
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacga-ttttgagaatagtcattatatttcaataaatgtttttaaaattccta 471  Q
    ||||||||||||||| || || || ||||||  || |||| | ||||||| ||| ||||||||||||||||||||||| ||||    
T  3406774 gttaaatatgtttttcgttccgacattttgcgtgacttttaaaaatagtccttacatttcaataaatgtttttaaaatcccta 3406692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 466
Target Start/End: Original strand, 16284274 - 16284352
Alignment:
Q  389 agttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaat 466  Q
    |||||||||||||||| |||| ||| ||||||    |||||| |||||||| |||||||| | ||||||||||||||||    
T  16284274 agttaaatatgtttttagtccttacattttgcgtttttttgaagaatagtctttatattttattaaatgtttttaaaat 16284352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 466
Target Start/End: Original strand, 18999367 - 18999444
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttg-agaatagtcattatatttcaataaatgtttttaaaat 466  Q
    ||||||||||||||| |||| ||| ||||||||  ||||| |||||||||  || |||||| ||||| ||||||||||    
T  18999367 gttaaatatgtttttagtccttacattttgcactcttttgaagaatagtccatacatttcattaaatatttttaaaat 18999444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 7e-91; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 392 - 693
Target Start/End: Complemental strand, 12734691 - 12734401
Alignment:
Q  392 taaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagcg 490  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||  ||| ||||||||||||||||||||||| |||||||||||| |  ||||| |    
T  12734691 taaatatgtttttggtccctacgttttgcacgattttgagaattagttcttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtg 12734592  T
Q  491 taaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacgat 590  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||            |||||||||||||||    
T  12734591 taaatagtccctgctgtcaaatttctaacgtgatgccaatgttggcggttcaatctcgccggaaaacggcgga------------gaacttcaccacgat 12734504  T
Q  591 ttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatga 690  Q
     |||||| ||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  12734503 ctttctctgcagcttcgtagatgcggatcgccggtgttcgtcacacttccggtgaaatatgttggtttagaggggaagatttggaggccgaaagcgatga 12734404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 29917626 - 29917333
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||  |||||||||    
T  29917626 gttaaatatgtttttggtccctacattttgcacgattttgagaatagtccttacatttcaataaatgtttttaaaatccctacattttttctccgttagc 29917527  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    ||||||||||| || |||||||||  |||| ||||||  || ||||||||| |||||          |||| ||||||||  |||||| |||||||||||    
T  29917526 gtaaatagtccttgctgtcaaattattaacttgatgctgatgttggcggttcaatct----------cggcggagaacttctctatgagcttcaccacga 29917437  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | ||||||| |||| || ||||  |||||||| |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  29917436 tctttctcctcagcgtcgtagacacggatcgctggtgttcgtcacgcttccggtgaaaaatgttggtttagaggggaagatttggaggccgaaagcgatg 29917337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 537 - 692
Target Start/End: Complemental strand, 42253521 - 42253366
Alignment:
Q  537 ggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacgatttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgc 636  Q
    |||| ||||||||||||||||||| ||||| || ||||||| |||||||||||| ||||||| |||| || ||||  |||||||||||| || || ||||    
T  42253521 ggttcaatctcgccggaaaacggcggagaagttccctatgagcttcaccacgatctttctccacagcgtcgtagactcggatcgccggtatttgtgacgc 42253422  T
Q  637 ttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatgatg 692  Q
    |||| || |||| ||||||||||||||| ||||||||||||||||||| |||||||    
T  42253421 ttccggttaaatctgttggtttagaggggaagatttggaggccgaaagcgatgatg 42253366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 379 - 488
Target Start/End: Original strand, 29917095 - 29917204
Alignment:
Q  379 tattttaaagagttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacattttt 478  Q
    |||||| ||| |||||||||||||||  |||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||    
T  29917095 tatttttaagggttaaatatgtttttgatccctacgttttgcgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttt 29917194  T
Q  479 cgtccgttag 488  Q
      ||||||||    
T  29917195 tctccgttag 29917204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 390 - 486
Target Start/End: Original strand, 24845964 - 24846060
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgtt 486  Q
    ||||||| ||||||| ||| |||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||||||    
T  24845964 gttaaatctgtttttagtctctacattttgcacaattttgagaatagtccttacatttcaataaatgtttttaaaattcctatatttttcctccgtt 24846060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 12734174 - 12734272
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||  || |||||||| ||| |||||||||| |||||||||||  ||||||||    
T  12734174 gttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatatttttaaaatccctacattttttctccgttag 12734272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 379 - 512
Target Start/End: Original strand, 4624350 - 4624484
Alignment:
Q  379 tattttaaagagttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaaattcctacatttt 477  Q
    ||||||| || ||||||||||||||| || ||||| |||| | |   ||||| || | ||| ||| ||||||||||||||||||||||| ||||||||||    
T  4624350 tattttatagggttaaatatgtttttggtgcctacatttttccctcctttgacaaatcgtctttacatttcaataaatgtttttaaaatccctacatttt 4624449  T
Q  478 tcgtccgttagcgtaaatagtccctgttgtcaaat 512  Q
    || |||||||||  |||||||||||| ||||||||    
T  4624450 tcctccgttagcacaaatagtccctgctgtcaaat 4624484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 390 - 478
Target Start/End: Original strand, 4624534 - 4624623
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacattttt 478  Q
    ||||||||||||||| |||| ||  ||||||| || ||||| |||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  4624534 gttaaatatgtttttggtccttatattttgcatgactttgaagaatagtctttacatttcaataaatgtttttaaaatccctacattttt 4624623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 430 - 478
Target Start/End: Original strand, 16682573 - 16682621
Alignment:
Q  430 agaatagtcattatatttcaataaatgtttttaaaattcctacattttt 478  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  16682573 agaatagtcattacatttcaaaaaatgtttttaaaattcttacattttt 16682621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 488
Target Start/End: Complemental strand, 20683016 - 20682914
Alignment:
Q  387 agagttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgt 485  Q
    ||||||||||||||| || |||||||| ||| || ||||||| | |||| ||| ||| |||| ||||||||||||||||||  | ||||||||  |||||    
T  20683016 agagttaaatatgttattggtccctacatttagcgcgattttaaagaatggtccttacattttaataaatgtttttaaaatctccacatttttactccgt 20682917  T
Q  486 tag 488  Q
    |||    
T  20682916 tag 20682914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 471
Target Start/End: Complemental strand, 21006038 - 21005956
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttg-agaatagtcattatatttcaataaatgtttttaaaattccta 471  Q
    ||||||||||||||| |||||||| ||||||  |  |||| | ||||||| ||| ||||||||||||||||||||||| ||||    
T  21006038 gttaaatatgtttttggtccctacattttgcgtggctttgaaaaatagtccttacatttcaataaatgtttttaaaatcccta 21005956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 22601534 - 22601587
Alignment:
Q  424 attttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttt 477  Q
    |||||||||||||||  || |||| |||||||||||||||||||| ||||||||    
T  22601534 attttgagaatagtccctacatttaaataaatgtttttaaaattcttacatttt 22601587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 466
Target Start/End: Complemental strand, 6297945 - 6297874
Alignment:
Q  396 tatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaat 466  Q
    ||||||||| |||||||| ||||||  || ||||| |||||||| ||| |||||| ||||||||||||||||    
T  6297945 tatgtttttcgtccctacattttgcgtgactttgaagaatagtccttacatttcattaaatgtttttaaaat 6297874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 502
Target Start/End: Original strand, 44148576 - 44148691
Alignment:
Q  388 gagttaaatatgttttttgtccctacgttttgcacgattttg-agaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgtt 486  Q
    ||||||||||||||||| |||||||| |||| | |  ||||| |||||||||  || |||| |||||| ||||||||||| |  ||||||||  ||||||    
T  44148576 gagttaaatatgtttttagtccctacattttacgctcttttgaagaatagtccctacattttaataaacgtttttaaaatcctcacatttttactccgtt 44148675  T
Q  487 agcgtaaatagtccct 502  Q
    | |  |||||||||||    
T  44148676 atcaaaaatagtccct 44148691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 471
Target Start/End: Original strand, 6297636 - 6297718
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaat-agtcattatatttcaataaatgtttttaaaattccta 471  Q
    |||||||||||||||||||  ||| ||||||  || ||||| ||| |||  ||| ||||||||||||||||||||||| ||||    
T  6297636 gttaaatatgttttttgtctgtacattttgcgtgactttgaaaattagtttttacatttcaataaatgtttttaaaatcccta 6297718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 471
Target Start/End: Original strand, 44024399 - 44024481
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaaattccta 471  Q
    ||||||||||||||| |||| ||| ||||||  || ||||| || ||||| ||| |||||||||||| |||||||||| ||||    
T  44024399 gttaaatatgtttttggtccttacattttgcgtgactttgaaaaatagtccttacatttcaataaatatttttaaaatcccta 44024481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 471
Target Start/End: Original strand, 10047653 - 10047734
Alignment:
Q  391 ttaaatatgttttttgtccctacgttttgcacgattttg-agaatagtcattatatttcaataaatgtttttaaaattccta 471  Q
    |||||||||||||| ||| |||| ||||||| |||| || | ||||||| ||  |||||| |||||||||||||||| ||||    
T  10047653 ttaaatatgtttttggtctctacattttgcatgattctgaaaaatagtccttgcatttcactaaatgtttttaaaatcccta 10047734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 478
Target Start/End: Original strand, 26720310 - 26720411
Alignment:
Q  378 ttattttaaagagttaaatatgttttttgtccctacgttttgcacgattttga-gaatagtcattatatttcaataaatgtttttaaaattcctacattt 476  Q
    ||||||| |||  |||||||| ||||| |||||||| |||||| |   ||||| ||||||||  || |||||| ||||| |||||||||| |||||||||    
T  26720310 ttatttttaaggattaaatatatttttagtccctacattttgcgctcctttgaagaatagtccctacatttcattaaatatttttaaaatccctacattt 26720409  T
Q  477 tt 478  Q
    ||    
T  26720410 tt 26720411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 9040401 - 9040341
Alignment:
Q  186 ttagtcccacatcaattttagagatttgtcactctctttaatgatgtgacatgtgtgtgtt 246  Q
    ||||||||  |||||| || | |||||||||||||| ||||||||||| ||||| ||||||    
T  9040401 ttagtcccctatcaatgttggtgatttgtcactctcattaatgatgtggcatgtatgtgtt 9040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 390 - 501
Target Start/End: Original strand, 36155272 - 36155384
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    |||||||||| | || |||||||| |||||  ||| |||||  |||||||  || |||| |||||||||||||||||| | |||||||||  |||||||     
T  36155272 gttaaatatgctattggtccctacattttgtgcgactttgaataatagtccctacattttaataaatgtttttaaaatccttacatttttactccgttat 36155371  T
Q  489 cgtaaatagtccc 501  Q
    | | |||||||||    
T  36155372 cattaatagtccc 36155384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 147; Significance: 4e-77; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 390 - 693
Target Start/End: Complemental strand, 39940 - 39649
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttagc 489  Q
    ||||||||||||||| |||||||| |||| | |||||||||||||||||  || ||||||||||||||||||||||| | |||||||||| |||||||||    
T  39940 gttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccttacatttttcctccgttagc 39841  T
Q  490 gtaaatagtccctgttgtcaaatttctaacgtgatgccaatattggcggtttaatctcgccggaaaacggcagagaactttcctatgaacttcaccacga 589  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| |||| |||||||| |||||||||| |             |||||||||||||     
T  39840 gtaaatagtccctgttgtcaaatttctaacgtgatgtcaatgttggtggttcaatctcgctggaaaacggcgg------------ggaacttcaccacgg 39753  T
Q  590 tttttctccgcagcatcatagatgcggatcgccggtgttcgtcacgcttccagtgaaatatgttggtttagagggaaagatttggaggccgaaagtgatg 689  Q
    | |||||||||| | || ||||||| ||||||| |||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  39752 tctttctccgcaacgtcgtagatgcagatcgccagtgttcgtgacatttccagtgaaatatgttggtttagatggaaagatttggaggccgaaagcgatg 39653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 390 - 479
Target Start/End: Original strand, 39422 - 39511
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaatagtcattatatttcaataaatgtttttaaaattcctacatttttc 479  Q
    ||||||||||||||| |||||||| ||||   |||||||||||||| ||  || ||||||||||||||||||||||| ||||||||||||    
T  39422 gttaaatatgtttttggtccctacattttatgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 39511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 53; Significance: 5e-21; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 390 - 513
Target Start/End: Original strand, 29275 - 29399
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    |||||||||||| || |||||||| ||||||   ||||| |  ||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||||||    
T  29275 gttaaatatgttattggtccctacattttgcctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacatttttcatccgttag 29374  T
Q  489 cgtaaatagtccctgttgtcaaatt 513  Q
    |  ||||||||||||  ||||||||    
T  29375 cacaaatagtccctgccgtcaaatt 29399  T

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Target: scaffold0148; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 390 - 512
Target Start/End: Complemental strand, 33083 - 32960
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgag-aatagtcattatatttcaataaatgtttttaaaattcctacatttttcgtccgttag 488  Q
    ||||||||||||||| |||||||| ||||||   ||||| |  ||||||| ||| ||||||||||||||||||||||| |||||||||||  ||||||||    
T  33083 gttaaatatgtttttggtccctacattttgcctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacattttttatccgttag 32984  T
Q  489 cgtaaatagtccctgttgtcaaat 512  Q
    |  ||||||||||||  |||||||    
T  32983 cacaaatagtccctgccgtcaaat 32960  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 390 - 466
Target Start/End: Original strand, 107896 - 107973
Alignment:
Q  390 gttaaatatgttttttgtccctacgttttgcacgattttgagaa-tagtcattatatttcaataaatgtttttaaaat 466  Q
    ||||||||||||||| |||||||| |||| |  |||||||| || ||||| ||| |||||||||||||||||||||||    
T  107896 gttaaatatgtttttggtccctacattttccgtgattttgaaaaatagtccttacatttcaataaatgtttttaaaat 107973  T

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