View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13205_low_1 (Length: 606)

Name: NF13205_low_1
Description: NF13205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13205_low_1
NF13205_low_1
[»] chr3 (66 HSPs)
chr3 (18-447)||(45206611-45207034)
chr3 (63-320)||(45203165-45203424)
chr3 (452-535)||(7459992-7460075)
chr3 (445-534)||(18659051-18659140)
chr3 (444-535)||(43137849-43137940)
chr3 (453-535)||(8559177-8559259)
chr3 (453-535)||(38833671-38833753)
chr3 (446-535)||(37832900-37832989)
chr3 (446-531)||(54840304-54840389)
chr3 (455-535)||(51062399-51062479)
chr3 (456-535)||(51392464-51392543)
chr3 (445-535)||(1327310-1327400)
chr3 (446-532)||(52668660-52668746)
chr3 (461-534)||(45167314-45167387)
chr3 (446-534)||(21906996-21907084)
chr3 (445-533)||(34827321-34827409)
chr3 (452-535)||(10571316-10571399)
chr3 (453-535)||(46483558-46483640)
chr3 (446-535)||(38492052-38492141)
chr3 (452-535)||(49057862-49057945)
chr3 (446-535)||(27848952-27849041)
chr3 (446-535)||(29728270-29728359)
chr3 (446-535)||(48707015-48707104)
chr3 (444-534)||(15503023-15503113)
chr3 (446-535)||(25097359-25097448)
chr3 (445-534)||(53066374-53066462)
chr3 (471-535)||(28690541-28690605)
chr3 (471-535)||(32285348-32285412)
chr3 (474-533)||(45093748-45093807)
chr3 (446-534)||(32951309-32951397)
chr3 (444-535)||(3547592-3547683)
chr3 (474-535)||(35718027-35718088)
chr3 (471-535)||(7671485-7671549)
chr3 (471-535)||(9145527-9145591)
chr3 (446-534)||(10435134-10435222)
chr3 (473-534)||(4238793-4238854)
chr3 (474-531)||(10437310-10437367)
chr3 (473-534)||(17052891-17052952)
chr3 (571-606)||(1327437-1327472)
chr3 (571-606)||(7459921-7459956)
chr3 (571-606)||(8559106-8559141)
chr3 (571-606)||(18659177-18659212)
chr3 (571-606)||(21907121-21907156)
chr3 (571-606)||(37833025-37833060)
chr3 (571-606)||(38833788-38833823)
chr3 (571-606)||(43137976-43138011)
chr3 (452-535)||(47638061-47638144)
chr3 (573-606)||(7671414-7671447)
chr3 (573-606)||(27849078-27849111)
chr3 (573-606)||(29728199-29728232)
chr3 (477-534)||(36665050-36665107)
chr3 (573-606)||(45167426-45167459)
chr3 (571-606)||(51062515-51062550)
chr3 (571-606)||(54840229-54840264)
chr3 (573-603)||(3547525-3547555)
chr3 (573-603)||(35717959-35717989)
chr3 (573-606)||(10437409-10437442)
chr3 (573-606)||(17052991-17053024)
chr3 (573-606)||(25097288-25097321)
chr3 (573-606)||(32285277-32285310)
chr3 (573-606)||(38492178-38492211)
chr3 (205-250)||(45211799-45211844)
chr3 (573-606)||(48690180-48690213)
chr3 (445-505)||(16365449-16365509)
chr3 (144-176)||(45211867-45211899)
chr3 (446-526)||(52550797-52550877)
[»] chr6 (31 HSPs)
chr6 (40-177)||(21466073-21466210)
chr6 (446-535)||(643603-643692)
chr6 (446-534)||(31854818-31854906)
chr6 (444-535)||(24150739-24150830)
chr6 (446-535)||(8796050-8796139)
chr6 (446-535)||(11114565-11114654)
chr6 (461-534)||(22020291-22020364)
chr6 (446-535)||(29403644-29403733)
chr6 (446-535)||(33121542-33121631)
chr6 (471-535)||(29986330-29986394)
chr6 (444-535)||(25435410-25435500)
chr6 (446-535)||(13207125-13207214)
chr6 (446-535)||(18991904-18991993)
chr6 (452-535)||(20662231-20662315)
chr6 (473-535)||(7098045-7098107)
chr6 (446-535)||(30237165-30237255)
chr6 (485-533)||(25163203-25163251)
chr6 (571-606)||(11114690-11114725)
chr6 (571-606)||(20662160-20662195)
chr6 (571-606)||(22020401-22020436)
chr6 (571-606)||(24150866-24150901)
chr6 (571-606)||(29986259-29986294)
chr6 (571-606)||(31854943-31854978)
chr6 (573-606)||(643532-643565)
chr6 (573-606)||(13207054-13207087)
chr6 (573-606)||(18992030-18992063)
chr6 (573-606)||(25435538-25435571)
chr6 (573-606)||(33121669-33121702)
chr6 (571-606)||(7097974-7098009)
chr6 (575-606)||(19788679-19788710)
chr6 (571-600)||(29403769-29403798)
[»] chr5 (66 HSPs)
chr5 (443-535)||(29627265-29627357)
chr5 (446-535)||(35448169-35448258)
chr5 (443-535)||(38697960-38698052)
chr5 (446-535)||(23988579-23988668)
chr5 (446-535)||(40512852-40512941)
chr5 (446-535)||(42148307-42148396)
chr5 (446-532)||(32334815-32334901)
chr5 (447-535)||(5364421-5364509)
chr5 (444-535)||(39894779-39894870)
chr5 (444-535)||(5213094-5213185)
chr5 (444-535)||(32002186-32002277)
chr5 (444-535)||(37843747-37843838)
chr5 (445-535)||(4925010-4925100)
chr5 (445-535)||(35290285-35290375)
chr5 (446-535)||(37516144-37516233)
chr5 (453-535)||(14475406-14475488)
chr5 (445-535)||(39036409-39036499)
chr5 (446-535)||(41411330-41411419)
chr5 (453-535)||(43517232-43517314)
chr5 (446-535)||(1830654-1830743)
chr5 (446-535)||(40316121-40316210)
chr5 (446-534)||(16048083-16048171)
chr5 (471-535)||(19889679-19889743)
chr5 (473-535)||(42421712-42421774)
chr5 (473-534)||(4300005-4300066)
chr5 (446-535)||(30779917-30780006)
chr5 (452-531)||(43067235-43067314)
chr5 (473-534)||(970165-970226)
chr5 (473-534)||(22613882-22613943)
chr5 (474-534)||(15268138-15268198)
chr5 (446-534)||(39405764-39405852)
chr5 (475-534)||(21961256-21961315)
chr5 (571-606)||(29627393-29627428)
chr5 (571-606)||(32334739-32334774)
chr5 (571-606)||(38698088-38698123)
chr5 (571-606)||(40512781-40512816)
chr5 (571-606)||(42148432-42148467)
chr5 (573-606)||(1830782-1830815)
chr5 (573-606)||(4924939-4924972)
chr5 (573-606)||(5213023-5213056)
chr5 (571-604)||(5364545-5364578)
chr5 (444-505)||(16954688-16954749)
chr5 (474-535)||(19868857-19868918)
chr5 (573-606)||(37516272-37516305)
chr5 (573-606)||(37843676-37843709)
chr5 (573-606)||(39036537-39036570)
chr5 (573-606)||(40316249-40316282)
chr5 (573-606)||(41411258-41411291)
chr5 (575-606)||(23988706-23988737)
chr5 (479-534)||(24520242-24520296)
chr5 (571-606)||(32002115-32002150)
chr5 (475-534)||(32300599-32300658)
chr5 (571-606)||(39894906-39894941)
chr5 (573-603)||(15268238-15268268)
chr5 (471-529)||(25563525-25563583)
chr5 (573-603)||(35290413-35290443)
chr5 (573-606)||(2864081-2864114)
chr5 (573-606)||(14475331-14475364)
chr5 (573-606)||(16048212-16048245)
chr5 (573-606)||(16954750-16954783)
chr5 (474-531)||(19087946-19088003)
chr5 (573-606)||(19868787-19868820)
chr5 (573-606)||(19889780-19889813)
chr5 (571-600)||(35448104-35448133)
chr5 (573-606)||(39405891-39405924)
chr5 (573-606)||(43517161-43517194)
[»] chr2 (66 HSPs)
chr2 (445-535)||(18718238-18718328)
chr2 (445-535)||(14372076-14372166)
chr2 (445-535)||(23671375-23671465)
chr2 (443-535)||(40425421-40425513)
chr2 (444-535)||(42038521-42038612)
chr2 (445-534)||(34826911-34827000)
chr2 (446-534)||(27559575-27559663)
chr2 (452-531)||(14707710-14707789)
chr2 (445-535)||(41172929-41173019)
chr2 (446-535)||(3987404-3987493)
chr2 (441-534)||(4045406-4045499)
chr2 (444-535)||(20517417-20517508)
chr2 (446-535)||(7443063-7443152)
chr2 (446-535)||(44283451-44283540)
chr2 (461-534)||(44330399-44330472)
chr2 (447-535)||(41463689-41463777)
chr2 (452-535)||(16941983-16942066)
chr2 (452-535)||(17012648-17012731)
chr2 (445-535)||(9877255-9877345)
chr2 (445-535)||(30708727-30708817)
chr2 (445-535)||(32776072-32776162)
chr2 (453-524)||(38588072-38588143)
chr2 (461-535)||(36199123-36199197)
chr2 (446-534)||(40598128-40598216)
chr2 (473-531)||(4083234-4083292)
chr2 (445-535)||(38963518-38963608)
chr2 (473-535)||(38137702-38137764)
chr2 (473-535)||(40898667-40898729)
chr2 (455-535)||(24283130-24283210)
chr2 (571-606)||(3987333-3987368)
chr2 (571-606)||(14707635-14707670)
chr2 (571-606)||(18718364-18718399)
chr2 (571-606)||(20517543-20517578)
chr2 (571-606)||(27559700-27559735)
chr2 (496-535)||(30776365-30776404)
chr2 (571-606)||(34827037-34827072)
chr2 (571-606)||(36199052-36199087)
chr2 (571-606)||(41172858-41172893)
chr2 (571-606)||(44330509-44330544)
chr2 (573-606)||(4045977-4046010)
chr2 (573-606)||(7442992-7443025)
chr2 (573-606)||(30708855-30708888)
chr2 (573-606)||(39418121-39418154)
chr2 (497-534)||(43925254-43925291)
chr2 (571-603)||(16941915-16941947)
chr2 (571-603)||(17012580-17012612)
chr2 (500-535)||(332330-332365)
chr2 (453-516)||(5030462-5030525)
chr2 (571-606)||(23671501-23671536)
chr2 (575-606)||(40425350-40425381)
chr2 (575-606)||(42020305-42020336)
chr2 (571-606)||(42038648-42038683)
chr2 (575-606)||(44283380-44283411)
chr2 (571-605)||(18734027-18734061)
chr2 (473-535)||(39418192-39418254)
chr2 (473-531)||(42951367-42951425)
chr2 (573-606)||(4045334-4045367)
chr2 (474-535)||(4045878-4045939)
chr2 (573-606)||(9877184-9877217)
chr2 (474-535)||(13399277-13399338)
chr2 (575-604)||(14372206-14372235)
chr2 (573-606)||(24283061-24283094)
chr2 (573-606)||(30776294-30776327)
chr2 (573-606)||(36931713-36931746)
chr2 (573-606)||(40598256-40598289)
chr2 (577-606)||(41463618-41463647)
[»] chr8 (56 HSPs)
chr8 (446-535)||(45081812-45081901)
chr8 (443-534)||(38845197-38845288)
chr8 (446-535)||(29790942-29791031)
chr8 (444-535)||(40013649-40013740)
chr8 (445-535)||(30289923-30290013)
chr8 (443-535)||(3293274-3293366)
chr8 (444-535)||(2805648-2805739)
chr8 (452-531)||(43066133-43066212)
chr8 (446-535)||(1580937-1581026)
chr8 (445-534)||(37709898-37709987)
chr8 (443-535)||(30380527-30380619)
chr8 (446-534)||(38739657-38739745)
chr8 (454-535)||(6470853-6470934)
chr8 (446-535)||(13138304-13138393)
chr8 (445-535)||(8351052-8351142)
chr8 (444-535)||(2986337-2986427)
chr8 (452-535)||(23248783-23248866)
chr8 (446-535)||(39361128-39361214)
chr8 (444-535)||(44123671-44123762)
chr8 (474-535)||(12893559-12893620)
chr8 (443-535)||(14522377-14522469)
chr8 (446-535)||(23764623-23764713)
chr8 (471-532)||(9302528-9302589)
chr8 (471-535)||(886239-886303)
chr8 (474-534)||(31127978-31128038)
chr8 (444-535)||(45253747-45253839)
chr8 (473-535)||(25256361-25256423)
chr8 (485-534)||(18809315-18809364)
chr8 (571-606)||(2805577-2805612)
chr8 (571-606)||(3293202-3293237)
chr8 (571-606)||(23248902-23248937)
chr8 (571-606)||(30380655-30380690)
chr8 (571-606)||(38739782-38739817)
chr8 (571-606)||(38845732-38845767)
chr8 (573-606)||(1580866-1580899)
chr8 (573-606)||(2986452-2986485)
chr8 (573-606)||(6470715-6470748)
chr8 (573-606)||(6470972-6471005)
chr8 (573-606)||(8350981-8351014)
chr8 (474-535)||(10658006-10658067)
chr8 (473-534)||(11854551-11854612)
chr8 (573-606)||(13138233-13138266)
chr8 (446-531)||(14847210-14847295)
chr8 (573-606)||(20167678-20167711)
chr8 (573-606)||(23248979-23249012)
chr8 (573-606)||(29791069-29791102)
chr8 (573-606)||(43066253-43066286)
chr8 (574-606)||(45081940-45081972)
chr8 (575-606)||(30290053-30290084)
chr8 (571-606)||(37710024-37710059)
chr8 (571-606)||(39361250-39361285)
chr8 (571-606)||(40013776-40013811)
chr8 (573-606)||(14522507-14522540)
chr8 (573-606)||(20671517-20671550)
chr8 (573-606)||(23764550-23764583)
chr8 (573-606)||(31127906-31127939)
[»] chr4 (91 HSPs)
chr4 (443-535)||(3901311-3901403)
chr4 (444-535)||(46212522-46212613)
chr4 (445-535)||(46803630-46803720)
chr4 (446-534)||(5744256-5744344)
chr4 (452-535)||(6494594-6494677)
chr4 (445-535)||(28166273-28166363)
chr4 (445-535)||(45198512-45198602)
chr4 (445-535)||(47579286-47579376)
chr4 (446-535)||(3442516-3442605)
chr4 (445-534)||(5735270-5735359)
chr4 (446-535)||(21859091-21859180)
chr4 (446-535)||(21914954-21915043)
chr4 (444-535)||(26205876-26205967)
chr4 (446-535)||(39786528-39786617)
chr4 (446-534)||(4264134-4264222)
chr4 (443-535)||(28151988-28152080)
chr4 (452-535)||(37688205-37688288)
chr4 (452-535)||(49768451-49768534)
chr4 (453-535)||(7738991-7739073)
chr4 (452-535)||(20678759-20678842)
chr4 (446-535)||(18360145-18360234)
chr4 (446-535)||(36602694-36602783)
chr4 (442-534)||(55190887-55190979)
chr4 (446-535)||(4209363-4209452)
chr4 (446-535)||(23255935-23256024)
chr4 (463-535)||(1377049-1377121)
chr4 (444-535)||(50033018-50033109)
chr4 (444-535)||(50035537-50035628)
chr4 (472-531)||(53568380-53568439)
chr4 (445-535)||(5123329-5123419)
chr4 (445-534)||(19634021-19634110)
chr4 (443-535)||(19652427-19652519)
chr4 (471-535)||(19731337-19731401)
chr4 (477-535)||(3443559-3443617)
chr4 (445-535)||(19170711-19170801)
chr4 (465-531)||(19525890-19525956)
chr4 (444-530)||(51737130-51737216)
chr4 (473-534)||(6923113-6923174)
chr4 (477-534)||(19631339-19631396)
chr4 (473-534)||(25644386-25644447)
chr4 (455-535)||(39260303-39260383)
chr4 (474-529)||(23603825-23603880)
chr4 (471-534)||(26659865-26659928)
chr4 (446-516)||(39195672-39195742)
chr4 (474-535)||(42187151-42187212)
chr4 (468-529)||(55014284-55014345)
chr4 (478-534)||(55997146-55997202)
chr4 (571-606)||(1377157-1377192)
chr4 (571-606)||(3442445-3442480)
chr4 (571-606)||(3901240-3901275)
chr4 (571-606)||(4264259-4264294)
chr4 (571-606)||(5735396-5735431)
chr4 (571-606)||(5744184-5744219)
chr4 (571-606)||(21859020-21859055)
chr4 (571-606)||(21914883-21914918)
chr4 (571-606)||(26205805-26205840)
chr4 (571-606)||(28152116-28152151)
chr4 (571-606)||(28166399-28166434)
chr4 (571-606)||(37688134-37688169)
chr4 (475-534)||(39193941-39194000)
chr4 (571-606)||(45198441-45198476)
chr4 (571-606)||(46212451-46212486)
chr4 (571-606)||(46803757-46803792)
chr4 (571-606)||(47579411-47579446)
chr4 (571-606)||(49768570-49768605)
chr4 (573-606)||(3443488-3443521)
chr4 (571-604)||(6494713-6494746)
chr4 (573-606)||(7738920-7738953)
chr4 (573-606)||(18360074-18360107)
chr4 (573-606)||(19170640-19170673)
chr4 (573-606)||(19633950-19633983)
chr4 (573-606)||(36602821-36602854)
chr4 (573-606)||(39786458-39786491)
chr4 (573-606)||(42187080-42187113)
chr4 (573-606)||(50971586-50971619)
chr4 (571-603)||(39194037-39194069)
chr4 (474-534)||(51736822-51736882)
chr4 (475-534)||(10181017-10181076)
chr4 (571-606)||(20678689-20678724)
chr4 (471-505)||(14958033-14958067)
chr4 (573-603)||(23256062-23256092)
chr4 (477-535)||(50971491-50971548)
chr4 (573-606)||(19525815-19525848)
chr4 (573-606)||(19631435-19631468)
chr4 (573-606)||(19652357-19652390)
chr4 (573-606)||(25644486-25644519)
chr4 (573-606)||(35064104-35064137)
chr4 (573-606)||(39195591-39195624)
chr4 (573-606)||(39260233-39260266)
chr4 (573-606)||(55190815-55190848)
chr4 (497-533)||(27976744-27976780)
[»] chr7 (58 HSPs)
chr7 (446-535)||(36819696-36819785)
chr7 (445-535)||(32619114-32619204)
chr7 (446-535)||(19072769-19072858)
chr7 (446-535)||(42086810-42086899)
chr7 (452-535)||(44479892-44479975)
chr7 (445-535)||(2400284-2400374)
chr7 (453-535)||(23474141-23474223)
chr7 (445-535)||(28185580-28185670)
chr7 (445-535)||(37951117-37951207)
chr7 (446-535)||(47080980-47081069)
chr7 (446-535)||(47713674-47713763)
chr7 (445-535)||(36859380-36859470)
chr7 (446-531)||(31466534-31466619)
chr7 (446-535)||(36905526-36905615)
chr7 (447-535)||(31110625-31110711)
chr7 (446-535)||(34478183-34478272)
chr7 (445-531)||(4612263-4612349)
chr7 (446-531)||(42834468-42834553)
chr7 (474-535)||(48531350-48531411)
chr7 (446-509)||(47713777-47713840)
chr7 (473-535)||(21392045-21392107)
chr7 (474-534)||(10464288-10464348)
chr7 (446-534)||(37231737-37231825)
chr7 (468-535)||(31497875-31497942)
chr7 (449-534)||(4033294-4033379)
chr7 (446-534)||(35500920-35501008)
chr7 (455-535)||(47537932-47538012)
chr7 (485-534)||(36643201-36643250)
chr7 (571-606)||(2400410-2400445)
chr7 (571-606)||(4612188-4612223)
chr7 (571-606)||(32619043-32619078)
chr7 (571-606)||(36819821-36819856)
chr7 (571-606)||(36859309-36859344)
chr7 (571-606)||(36905651-36905686)
chr7 (571-606)||(37951046-37951081)
chr7 (571-606)||(42086739-42086774)
chr7 (571-606)||(44479822-44479857)
chr7 (571-606)||(47081105-47081140)
chr7 (471-521)||(38198506-38198556)
chr7 (480-534)||(39982287-39982341)
chr7 (573-606)||(18795241-18795274)
chr7 (573-606)||(31466459-31466492)
chr7 (445-534)||(40348409-40348498)
chr7 (573-606)||(42834393-42834426)
chr7 (573-606)||(44389387-44389420)
chr7 (573-606)||(46657760-46657793)
chr7 (573-606)||(47538050-47538083)
chr7 (573-606)||(48531449-48531482)
chr7 (475-531)||(42493806-42493862)
chr7 (574-606)||(47713603-47713635)
chr7 (571-606)||(19072894-19072929)
chr7 (573-603)||(2450812-2450842)
chr7 (573-606)||(14201504-14201537)
chr7 (573-606)||(21392145-21392178)
chr7 (573-606)||(23474070-23474103)
chr7 (573-606)||(31497805-31497838)
chr7 (573-606)||(35500848-35500881)
chr7 (573-606)||(37231664-37231697)
[»] chr1 (61 HSPs)
chr1 (446-535)||(25531778-25531867)
chr1 (446-535)||(48219814-48219903)
chr1 (443-535)||(50539257-50539349)
chr1 (444-535)||(39354436-39354527)
chr1 (446-535)||(48264983-48265072)
chr1 (446-535)||(52378989-52379078)
chr1 (446-534)||(32988522-32988610)
chr1 (446-535)||(50876364-50876453)
chr1 (452-535)||(38458735-38458818)
chr1 (447-531)||(49805428-49805512)
chr1 (443-535)||(3529173-3529265)
chr1 (444-535)||(23569846-23569937)
chr1 (444-535)||(30529222-30529313)
chr1 (445-535)||(32565745-32565835)
chr1 (461-535)||(42708519-42708593)
chr1 (452-531)||(45235021-45235100)
chr1 (457-535)||(29161853-29161931)
chr1 (465-531)||(47222233-47222299)
chr1 (456-535)||(37281102-37281181)
chr1 (473-531)||(1849726-1849784)
chr1 (452-534)||(16266168-16266250)
chr1 (471-533)||(16751627-16751689)
chr1 (444-534)||(50481276-50481366)
chr1 (473-534)||(16265060-16265121)
chr1 (473-534)||(26441664-26441725)
chr1 (471-532)||(38738153-38738214)
chr1 (471-532)||(48376183-48376244)
chr1 (446-534)||(43680069-43680157)
chr1 (452-531)||(4605004-4605083)
chr1 (475-529)||(14075764-14075818)
chr1 (473-535)||(31971559-31971621)
chr1 (473-534)||(24982378-24982439)
chr1 (446-534)||(3898744-3898832)
chr1 (474-534)||(31698761-31698821)
chr1 (571-606)||(1849825-1849860)
chr1 (571-606)||(32988450-32988485)
chr1 (571-606)||(39354365-39354400)
chr1 (571-606)||(42708625-42708660)
chr1 (571-606)||(49805353-49805388)
chr1 (571-606)||(50539385-50539420)
chr1 (571-606)||(50876489-50876524)
chr1 (493-534)||(23330499-23330540)
chr1 (573-606)||(25531905-25531938)
chr1 (573-606)||(30529151-30529184)
chr1 (573-606)||(37281219-37281252)
chr1 (573-606)||(38738079-38738112)
chr1 (573-606)||(41501708-41501741)
chr1 (487-535)||(41501780-41501828)
chr1 (575-606)||(3529305-3529336)
chr1 (475-534)||(27990887-27990945)
chr1 (571-606)||(38458855-38458890)
chr1 (571-606)||(48219743-48219778)
chr1 (571-606)||(48264912-48264947)
chr1 (575-606)||(52379118-52379149)
chr1 (477-531)||(38737554-38737608)
chr1 (573-606)||(16265160-16265193)
chr1 (573-606)||(23569775-23569808)
chr1 (573-606)||(24982478-24982511)
chr1 (573-606)||(29161970-29162003)
chr1 (573-606)||(31971488-31971521)
chr1 (573-606)||(32565873-32565906)
[»] scaffold0092 (2 HSPs)
scaffold0092 (446-535)||(44280-44369)
scaffold0092 (571-606)||(44209-44244)
[»] scaffold0051 (2 HSPs)
scaffold0051 (446-535)||(41389-41478)
scaffold0051 (571-606)||(41318-41353)
[»] scaffold0459 (2 HSPs)
scaffold0459 (446-535)||(12752-12841)
scaffold0459 (571-606)||(12877-12912)
[»] scaffold0366 (4 HSPs)
scaffold0366 (446-535)||(10393-10482)
scaffold0366 (446-535)||(14059-14148)
scaffold0366 (571-606)||(10518-10553)
scaffold0366 (571-606)||(14184-14219)
[»] scaffold0027 (2 HSPs)
scaffold0027 (446-529)||(117321-117404)
scaffold0027 (571-606)||(117446-117481)
[»] scaffold0340 (1 HSPs)
scaffold0340 (446-531)||(14345-14430)
[»] scaffold0007 (2 HSPs)
scaffold0007 (446-535)||(15388-15477)
scaffold0007 (573-606)||(15317-15350)
[»] scaffold0111 (1 HSPs)
scaffold0111 (474-535)||(38532-38593)
[»] scaffold0604 (1 HSPs)
scaffold0604 (573-606)||(1241-1274)


Alignment Details
Target: chr3 (Bit Score: 345; Significance: 0; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 18 - 447
Target Start/End: Original strand, 45206611 - 45207034
Alignment:
Q  18 gatttgtcccttgctacattatattataacatatttgccgcattcagaatatgttct-aagaacttgcagggaccaaccatttattaacatgctaagtgt 116  Q
    |||||||||||||||||||||||     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45206611 gatttgtcccttgctacattata-----acatatttgccgcattcagaatatgttcttaagaacttgcagggaccaaccatttattaacatgctaagtgt 45206705  T
Q  117 tgctcttctaggccaatgtggtggcagttgacaatattgcaagtcaactgcatggtcctgtatgggttaatttgtgtgctgatgaaccaatttgcaatcg 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45206706 tgctcttctaggccaatgtggtggcagttgacaatattgcaagtcaactgcatggtcctgtatgggttaatttgtgtgttgatgaaccaatttgcaatcg 45206805  T
Q  217 aatctgttctgtttgaaattcaccctttctcaaaatcatatcaaacaatcaatcttctatgctcgattgttatgttttgtcctgtaatgatatacatttt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  45206806 aatctgttctgtttgaaattcaccctttctcaaaatcatatcaaataatcaatcttctctgctcgattgttatgttttgtcttgtaatgatatacatttt 45206905  T
Q  317 cactctgagttagtattttcatgcatttataattcatactgacagacaagtattgacttttatccatttatttgtgtgagtacaatttaatgaaaattga 416  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||  ||||||||||||||||| ||||||||    
T  45206906 cactctgagttagtattttcatgcatttataattcatac-gacagacaagtaatgacttttatgcatttatt--tgtgagtacaatttaattaaaattga 45207002  T
Q  417 tttaaaacataataacttaaa-ttgttaaata 447  Q
    ||||||||||||||| ||||| ||||||||||    
T  45207003 tttaaaacataataatttaaagttgttaaata 45207034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 63 - 320
Target Start/End: Original strand, 45203165 - 45203424
Alignment:
Q  63 agaatatgttctaagaacttgcagggaccaa----ccatttattaacatgctaagtgttgctcttctaggccaatgtggtggcagttgacaatattgcaa 158  Q
    |||||||||||| | |||||| ||||||||     ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||    
T  45203165 agaatatgttcttaaaacttggagggaccatggatccattcatttacatgctaagtgttgctcttctaggccattgtggtggcagttgacaatatagtaa 45203264  T
Q  159 gtcaactgcatggtcctgtatgggttaatttgtgtgctgatgaaccaatttgcaatcgaatctgttctgtttgaaattcaccctttctcaaaatcatatc 258  Q
    ||||||||||||||||||     |||| |||||||| |||||||||||||||||||||||| ||||| |||| ||| ||| ||||||||||| ||  |||    
T  45203265 gtcaactgcatggtcctgcgatagttagtttgtgtgttgatgaaccaatttgcaatcgaatttgttcagtttcaaaatcaacctttctcaaactc--atc 45203362  T
Q  259 aaacaatcaatcttctatgctcgattgttatgttttgtcctgtaatgatatacattttcact 320  Q
    ||    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  45203363 aatttttcaatcttctattctcgattgttatgttttgtcttgtaatgatatacattttcact 45203424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 452 - 535
Target Start/End: Complemental strand, 7460075 - 7459992
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  7460075 ctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 7459992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 534
Target Start/End: Original strand, 18659051 - 18659140
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||| |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  18659051 atactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 18659140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 444 - 535
Target Start/End: Original strand, 43137849 - 43137940
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||    
T  43137849 aatactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatattttcaattctctac 43137940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 453 - 535
Target Start/End: Complemental strand, 8559259 - 8559177
Alignment:
Q  453 tccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  8559259 tccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctctac 8559177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 453 - 535
Target Start/End: Original strand, 38833671 - 38833753
Alignment:
Q  453 tccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  38833671 tccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 38833753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 37832900 - 37832989
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||    
T  37832900 tactccctccgtccctaaataaatgacatagttgactctgacacacataccaatgcatatgttttatttttgatatcttcaattctctac 37832989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 54840389 - 54840304
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  54840389 tactccctccatccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattct 54840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 455 - 535
Target Start/End: Original strand, 51062399 - 51062479
Alignment:
Q  455 cgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  51062399 cgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 51062479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 456 - 535
Target Start/End: Complemental strand, 51392543 - 51392464
Alignment:
Q  456 gtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  51392543 gtccctaaataaatgacctagttgactcttacacacataccaatgcatatgttttatctttgatatcttcaattctctac 51392464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 1327310 - 1327400
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||||||||||| | |||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  1327310 atactccctccgtccctaaataaatgatctagttgactcttacatacataccaatgcatatgttttatctttgatatcttcaattctctac 1327400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 52668746 - 52668660
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctc 532  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  52668746 tactccctccgtccctaaataaatgacctagttggctctgacacacatatcaatgcatatattttatctttgatattttcaattctc 52668660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 461 - 534
Target Start/End: Original strand, 45167314 - 45167387
Alignment:
Q  461 taaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  45167314 taaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 45167387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 21906996 - 21907084
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| |||||||||| ||||||| | |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  21906996 tactccctccgtccctcaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattatcta 21907084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 445 - 533
Target Start/End: Original strand, 34827321 - 34827409
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctct 533  Q
    |||||| |||||||||| ||||| | ||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  34827321 atactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctct 34827409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 452 - 535
Target Start/End: Complemental strand, 10571399 - 10571316
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||  |||||| |||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  10571399 ctccgtccctcgataaatgacctagttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctac 10571316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 453 - 535
Target Start/End: Original strand, 46483558 - 46483640
Alignment:
Q  453 tccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||| |||| || ||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  46483558 tccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 46483640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 38492052 - 38492141
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| ||||| | ||||||||||||||||||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  38492052 tactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctac 38492141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 452 - 535
Target Start/End: Original strand, 49057862 - 49057945
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||| ||||||| ||||||||||||  ||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  49057862 ctccgtccctcaataaatgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 49057945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 27848952 - 27849041
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| | || || |||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  27848952 tactccctccgtccctcattagatgacctagttgactttgacatacataccaatgcatatgttttatctttgatatcttcaattctctac 27849041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 29728359 - 29728270
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||  || |||||||||||||| ||||| ||||||||||||| |||||    
T  29728359 tactccctccgtccctcaataaatgacctagttgactctgacacaagtaccaatgcatatgttttatcttagatatcttcaattttctac 29728270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 48707104 - 48707015
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||| | |  ||||||| ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  48707104 tactccctccgtccctaaataagtgatttagttgattctgacatacataccaatgcatatgttttatctttgatatcttcaattctctac 48707015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 444 - 534
Target Start/End: Original strand, 15503023 - 15503113
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||| |||||||||| |||| || ||||| ||||||| |||| || ||||||||||||||||| ||||||||||| ||||||||||||    
T  15503023 aatactccctccgtccctcaatagatgacctaattgactccgacatacgtatcaatgcatatgttttatctttgatatattcaattctcta 15503113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 25097448 - 25097359
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||| ||| |||| || || ||||||||||| |||||| || |||||||||||||| |||||||||||||||||||||||||    
T  25097448 tactccctccgtacctcaatagatgacttagttgactctaacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 25097359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 445 - 534
Target Start/End: Original strand, 53066374 - 53066462
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||| |||||||||| |||| || || |||||||||||||||||| || |||||||||||||| ||||||||||||||||||| ||||    
T  53066374 atactccctccgtccctcaatagatgac-tagttgactctgacacacttaccaatgcatatgttttatctttgatatcttcaattatcta 53066462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 471 - 535
Target Start/End: Original strand, 28690541 - 28690605
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  28690541 acctagttgactccgacacacataccaatgcatatgttttatctttgatatcttcaatgctctac 28690605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 471 - 535
Target Start/End: Complemental strand, 32285412 - 32285348
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||||||||||| || |||| ||||||||| |||||||||||||||||||||||||    
T  32285412 acctagttgactctgacacacgtaccaatacatatgttttatctttgatatcttcaattctctac 32285348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 474 - 533
Target Start/End: Original strand, 45093748 - 45093807
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctct 533  Q
    |||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  45093748 tagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctct 45093807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 446 - 534
Target Start/End: Complemental strand, 32951397 - 32951309
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| |||||||||  | ||||| | ||||||||||  |||||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  32951397 tactccctccgtcccatattaaatgatctagttgacttcgacacacataccaatgcatatgttttatctttggtatcttcaattctcta 32951309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 444 - 535
Target Start/End: Complemental strand, 3547683 - 3547592
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||||||  | || || ||||| ||||||| ||||||| || |||||||||||||| ||||||||||||||||||| |||||    
T  3547683 aatactccctccgtcccatattagatgacctaattgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattatctac 3547592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 35718088 - 35718027
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||||||| || |||||||||||||| ||| ||||||||||||||| |||||    
T  35718088 tagttgactctgacacacgtaccaatgcatatgttttatccttgatatcttcaattttctac 35718027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 471 - 535
Target Start/End: Complemental strand, 7671549 - 7671485
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||| || ||| ||  ||||||||||||||||| |||||||||||||||||||||||||    
T  7671549 acctagttgattcagacgcatgtatcaatgcatatgttttatctttgatatcttcaattctctac 7671485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 471 - 535
Target Start/End: Original strand, 9145527 - 9145591
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||| ||||||| || |||||||||||||| |||||||||||||| |||| |||||    
T  9145527 acctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttgaattttctac 9145591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 10435134 - 10435222
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||| ||||||||  | ||||| | ||||||||||  ||||||| || |||||||||||||| |||||| |||||||||||||||||    
T  10435134 tactctatccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttaatatcttcaattctcta 10435222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 534
Target Start/End: Complemental strand, 4238854 - 4238793
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||  ||||||| || |||||||||||||| |||||| |||||||||||||||||    
T  4238854 ctagttgacttcgacacacgtaccaatgcatatgttttatctttaatatcttcaattctcta 4238793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 531
Target Start/End: Original strand, 10437310 - 10437367
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    |||||||||||||||||| || ||||  |||||||| |||||||||||||||||||||    
T  10437310 tagttgactctgacacacgtaccaatttatatgttttatctttgatatcttcaattct 10437367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 534
Target Start/End: Original strand, 17052891 - 17052952
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||  ||||||| || |||||||||||||| ||||||||||||||||||| ||||    
T  17052891 ctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattttcta 17052952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 1327437 - 1327472
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  1327437 actcatcgagacgaatccaacaacatcttacatgat 1327472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 7459956 - 7459921
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  7459956 actcatcgagacgaatccaacaacatcttacatgat 7459921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 8559141 - 8559106
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  8559141 actcatcgagacgaatccaacaacatcttacatgat 8559106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 18659177 - 18659212
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  18659177 actcatcgagacgaatccaacaacatcttacatgat 18659212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 21907121 - 21907156
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  21907121 actcatcgagacgaatccaacaacatcttacatgat 21907156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 37833025 - 37833060
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  37833025 actcatcgagacgaatccaacaacatcttacatgat 37833060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 38833788 - 38833823
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  38833788 actcatcgagacgaatccaacaacatcttacatgat 38833823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 43137976 - 43138011
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  43137976 actcatcgagacgaatccaacaacatcttacatgat 43138011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 452 - 535
Target Start/End: Original strand, 47638061 - 47638144
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| || |||| || || || |||| ||||| |||| || |||||||||||||| |||||| ||||||||||||||||||    
T  47638061 ctccgtcactcaatagatgacttaattgattctgatacacgtaccaatgcatatgttttatctttaatatcttcaattctctac 47638144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 7671447 - 7671414
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  7671447 tcatcgagacgaatccaacaacatcttacatgat 7671414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 27849078 - 27849111
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  27849078 tcatcgagacgaatccaacaacatcttacatgat 27849111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 29728232 - 29728199
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  29728232 tcatcgagacgaatccaacaacatcttacatgat 29728199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 36665050 - 36665107
Alignment:
Q  477 ttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||| || |||| || |||||||||||||| |||||||||||||||| |||||||    
T  36665050 ttgactccgatacacgtaccaatgcatatgttttatctttgatatcttcatttctcta 36665107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 45167426 - 45167459
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  45167426 tcatcgagacgaatccaacaacatcttacatgat 45167459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 51062515 - 51062550
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||| |||||||||||||||||||||||||||||    
T  51062515 actcattgagacgaatccaacaacatcttacatgat 51062550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 54840264 - 54840229
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||| ||||||||||||||||||||||||    
T  54840264 actcatcgagatgaatccaacaacatcttacatgat 54840229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 573 - 603
Target Start/End: Complemental strand, 3547555 - 3547525
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacat 603  Q
    |||||||||||||||||||||||||||||||    
T  3547555 tcatcgagacgaatccaacaacatcttacat 3547525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 573 - 603
Target Start/End: Complemental strand, 35717989 - 35717959
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacat 603  Q
    |||||||||||||||||||||||||||||||    
T  35717989 tcatcgagacgaatccaacaacatcttacat 35717959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 10437409 - 10437442
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||| |||||||||||||||||||||||    
T  10437409 tcatcgagacaaatccaacaacatcttacatgat 10437442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 17052991 - 17053024
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||| |||||||||||||||||||||    
T  17052991 tcatcgagacgattccaacaacatcttacatgat 17053024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 25097321 - 25097288
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||| |||||||||||||||||    
T  25097321 tcatcgagacgaatcctacaacatcttacatgat 25097288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 32285310 - 32285277
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||| |||||||||||||||||||||||    
T  32285310 tcatcgagacaaatccaacaacatcttacatgat 32285277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 38492178 - 38492211
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||| |||||||||    
T  38492178 tcatcgagacgaatccaacaacattttacatgat 38492211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 45211844 - 45211799
Alignment:
Q  205 aatttgcaatcgaatctgttctgtttgaaattcaccctttctcaaa 250  Q
    ||||||||||||||||||||  |||| ||||||||| |||||||||    
T  45211844 aatttgcaatcgaatctgttgggtttcaaattcaccatttctcaaa 45211799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 48690180 - 48690213
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||||| |||||    
T  48690180 tcatcgagacgaatccaacaacatcttatatgat 48690213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 505
Target Start/End: Complemental strand, 16365509 - 16365449
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatat 505  Q
    |||||||||| |||||| |||| |  | ||||||||||||||||||| || ||||||||||    
T  16365509 atactctctctgtccctcaatagacgatctagttgactctgacacacgtaccaatgcatat 16365449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 176
Target Start/End: Complemental strand, 45211899 - 45211867
Alignment:
Q  144 ttgacaatattgcaagtcaactgcatggtcctg 176  Q
    |||||||||| ||||||||||||||||||||||    
T  45211899 ttgacaatatggcaagtcaactgcatggtcctg 45211867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 446 - 526
Target Start/End: Complemental strand, 52550877 - 52550797
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttca 526  Q
    |||||||||||||||  | || || || |||||||||| |||| || ||  ||||||||||||| ||||| ||||||||||    
T  52550877 tactctctccgtcccatattagatgacttagttgactccgacatacgtactaatgcatatgttttatcttcgatatcttca 52550797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 7e-60; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 21466210 - 21466073
Alignment:
Q  40 attataacatatttgccgcattcagaatatgttctaagaacttgcagggaccaaccatttattaacatgctaagtgttgctcttctaggccaatgtggtg 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||||||    
T  21466210 attataacatatttgccgcattcagaatatgttctaagaacttgcagggaccaatcatttattaacatgctaagtattgctcttctagaacaatgtggtg 21466111  T
Q  140 gcagttgacaatattgcaagtcaactgcatggtcctgt 177  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  21466110 gcagttgacaatattgcaagtcaactgcaaggtcctgt 21466073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 643692 - 643603
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  643692 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 643603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 31854818 - 31854906
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| |||||||||||||||||| ||| |||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  31854818 tactccctccgtccctaaataaatgacccagttgactctgatacacataccaatgcatatgttttatctttgatatcttcaattctcta 31854906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 444 - 535
Target Start/End: Original strand, 24150739 - 24150830
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||  ||||| ||||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  24150739 aatactccatccgttcctaaataaatgacctagttgactctgacacacataccaatgcatatattttatctttgatatcttcaattctctac 24150830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 8796050 - 8796139
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||||    
T  8796050 tactcactccgtccctaaataaatcatctagttgactctgacacacataccaatgtatatgttttatctttgatatctttaattctctac 8796139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 11114565 - 11114654
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| ||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||| |||||||||    
T  11114565 tactccctccgtccctcaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcgattctctac 11114654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 461 - 534
Target Start/End: Original strand, 22020291 - 22020364
Alignment:
Q  461 taaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  22020291 taaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 22020364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 29403644 - 29403733
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||| | ||||||| || ||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||    
T  29403644 tactctctccgtcctttaataaatgacttagttgactctgacacacataccaatgcgtatgttttatctttgatatcttcaattctctac 29403733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 33121542 - 33121631
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| ||||||| ||||||||||||  ||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  33121542 tactccctccgtcccttaataaatgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 33121631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 471 - 535
Target Start/End: Complemental strand, 29986394 - 29986330
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  29986394 acctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 29986330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 444 - 535
Target Start/End: Original strand, 25435410 - 25435500
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||| ||| ||||||| | |||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  25435410 aatactccctccgttcctcaataaatgatctagttgact-tgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 25435500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 13207214 - 13207125
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||||   | || || ||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  13207214 tactctctccgtcctacattagatgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 13207125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 18991904 - 18991993
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| ||||| | ||||||||||||||||||||| || |||||||||||||| || |||||||||||||||| |||||    
T  18991904 tactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatttttgatatcttcaattttctac 18991993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 452 - 535
Target Start/End: Complemental strand, 20662315 - 20662231
Alignment:
Q  452 ctccgtccct-aaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||| |||||||| ||||||||| |||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||    
T  20662315 ctccgtccctcaaataaatgacctagttgcctctgacatacataccaatgcatatgttttatctttaatatcttcaattctctac 20662231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 473 - 535
Target Start/End: Complemental strand, 7098107 - 7098045
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||    
T  7098107 ctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctac 7098045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 30237165 - 30237255
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatg-tttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| |||| || ||||||||||||||||||||| || ||||||||||| ||| ||||||||||||||| |||||||||    
T  30237165 tactccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatgtttttatctttgatatcttcgattctctac 30237255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 485 - 533
Target Start/End: Original strand, 25163203 - 25163251
Alignment:
Q  485 gacacacatatcaatgcatatgtttcatctttgatatcttcaattctct 533  Q
    ||||||| || |||||||||||||| |||||||||||||||||||||||    
T  25163203 gacacacgtaccaatgcatatgttttatctttgatatcttcaattctct 25163251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 11114690 - 11114725
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  11114690 actcatcgagacgaatccaacaacatcttacatgat 11114725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 20662195 - 20662160
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  20662195 actcatcgagacgaatccaacaacatcttacatgat 20662160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 22020401 - 22020436
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  22020401 actcatcgagacgaatccaacaacatcttacatgat 22020436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 24150866 - 24150901
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  24150866 actcatcgagacgaatccaacaacatcttacatgat 24150901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 29986294 - 29986259
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  29986294 actcatcgagacgaatccaacaacatcttacatgat 29986259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 31854943 - 31854978
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  31854943 actcatcgagacgaatccaacaacatcttacatgat 31854978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 643565 - 643532
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  643565 tcatcgagacgaatccaacaacatcttacatgat 643532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 13207087 - 13207054
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  13207087 tcatcgagacgaatccaacaacatcttacatgat 13207054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 18992030 - 18992063
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  18992030 tcatcgagacgaatccaacaacatcttacatgat 18992063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 25435538 - 25435571
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  25435538 tcatcgagacgaatccaacaacatcttacatgat 25435571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 33121669 - 33121702
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  33121669 tcatcgagacgaatccaacaacatcttacatgat 33121702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 7098009 - 7097974
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||| ||||||||||||||    
T  7098009 actcatcgagacgaatccaactacatcttacatgat 7097974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 575 - 606
Target Start/End: Complemental strand, 19788710 - 19788679
Alignment:
Q  575 atcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||    
T  19788710 atcgagacgaatccaacaacatcttacatgat 19788679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 600
Target Start/End: Original strand, 29403769 - 29403798
Alignment:
Q  571 actcatcgagacgaatccaacaacatctta 600  Q
    ||||||||||||||||||||||||||||||    
T  29403769 actcatcgagacgaatccaacaacatctta 29403798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 8e-38; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 443 - 535
Target Start/End: Original strand, 29627265 - 29627357
Alignment:
Q  443 aaatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29627265 aaatactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatctttgatatcttcaattctctac 29627357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 35448258 - 35448169
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  35448258 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 35448169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 443 - 535
Target Start/End: Original strand, 38697960 - 38698052
Alignment:
Q  443 aaatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||| |||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  38697960 aaatactccctccgtccctaaataaatgacctaattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 38698052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 23988579 - 23988668
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||    
T  23988579 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattatctac 23988668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 40512941 - 40512852
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  40512941 tactccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 40512852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 42148307 - 42148396
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  42148307 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 42148396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 32334901 - 32334815
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctc 532  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  32334901 tactccctctgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctc 32334815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 447 - 535
Target Start/End: Original strand, 5364421 - 5364509
Alignment:
Q  447 actctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||    
T  5364421 actccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctac 5364509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 444 - 535
Target Start/End: Original strand, 39894779 - 39894870
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||||||||||||| | | |||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  39894779 aatactccctccgtccctaaataagtgatctagttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctac 39894870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 444 - 535
Target Start/End: Complemental strand, 5213185 - 5213094
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||||||| ||||| | ||||||||||||||||||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  5213185 aatactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctac 5213094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 444 - 535
Target Start/End: Complemental strand, 32002277 - 32002186
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||||| ||||||||| | ||| |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  32002277 aatactccctccgtccttaaataaatgatctacttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctac 32002186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 444 - 535
Target Start/End: Complemental strand, 37843838 - 37843747
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||| ||||||| |||| || ||||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||||||    
T  37843838 aatactctcttcgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatgttttatatttgatatcttcaattctctac 37843747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 445 - 535
Target Start/End: Complemental strand, 4925100 - 4925010
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||| |||| || ||||||||||| ||||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  4925100 atactccctccgtccctcaatagatgacctagttgaccctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 4925010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 35290285 - 35290375
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||| |||| || ||||||||||||||||||||| || |||||||||| ||| |||||||||||||||||||||||||    
T  35290285 atactccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatattttatctttgatatcttcaattctctac 35290375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 37516144 - 37516233
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| |||| || | ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  37516144 tactccctccgtccctcaatagatgatctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 37516233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 453 - 535
Target Start/End: Complemental strand, 14475488 - 14475406
Alignment:
Q  453 tccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||| |||| || ||||||||||||| ||||||| ||  ||||||||||||| |||||||||||||||||||||||||    
T  14475488 tccgtcccttaatagatgacctagttgactccgacacacgtacaaatgcatatgttttatctttgatatcttcaattctctac 14475406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 39036409 - 39036499
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| ||||||| || |||| || || |||||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||||    
T  39036409 atactccctccgtctctcaatagatgacatagttgactctgacacacgtaccaatgtatatgttttatctttgatatcttcaattctctac 39036499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 41411419 - 41411330
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| |||| || || |||||||||  ||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  41411419 tactccctccgtccctcaatagatgacttagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 41411330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 453 - 535
Target Start/End: Complemental strand, 43517314 - 43517232
Alignment:
Q  453 tccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||| |||| |||| || ||||||||||||||||||||| ||  ||||||||||||| |||||||||||| ||||||||||||    
T  43517314 tccgcccctcaatagatgacctagttgactctgacacacgtactaatgcatatgttttatctttgatatcatcaattctctac 43517232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 1830654 - 1830743
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| |||| || || |||||||||  ||||||  || |||||||||||||| |||||||||||||||||||||||||    
T  1830654 tactccctccgtccctcaatagatgacttagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 1830743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 40316121 - 40316210
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| |||| || || |||||||||  ||||||  || |||||||||||||| |||||||||||||||||||||||||    
T  40316121 tactccctccgtccctcaatagatgacttagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 40316210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 16048083 - 16048171
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||||||||||||  |  |||| | ||||||||||  ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  16048083 tactctctccgtcccatatcaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 16048171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 471 - 535
Target Start/End: Original strand, 19889679 - 19889743
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||| || |||| || |||||||||||||| |||||||||||||||||||||||||    
T  19889679 acctagttgactccgatacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 19889743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 535
Target Start/End: Original strand, 42421712 - 42421774
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||| ||||||| || | |||||||||||| |||||||||||||||||||||||||    
T  42421712 ctagttgactccgacacacgtacctatgcatatgttttatctttgatatcttcaattctctac 42421774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 473 - 534
Target Start/End: Complemental strand, 4300066 - 4300005
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||  ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  4300066 ctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 4300005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 30780006 - 30779917
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||| ||| |||| || ||||||||||||| ||||||| || |||| ||||||||| |||||| ||||||||||||| ||||    
T  30780006 tactccctccgttcctcaatagatgacctagttgactccgacacacgtaccaatacatatgttttatctttcatatcttcaattcactac 30779917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 531
Target Start/End: Original strand, 43067235 - 43067314
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    |||||||||  | ||||| | ||||||||||  ||||||| || |||||||||||||| |||||||||||||||||||||    
T  43067235 ctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattct 43067314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 534
Target Start/End: Original strand, 970165 - 970226
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||  ||||||| || |||||||||||||| ||||||| ||||||||||||||||    
T  970165 ctagttgacttcgacacacgtaccaatgcatatgttttatctttgttatcttcaattctcta 970226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 534
Target Start/End: Complemental strand, 22613943 - 22613882
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||  ||||||| || |||||||||||||| ||||||||||||||||||| ||||    
T  22613943 ctagttgacttagacacacgtaccaatgcatatgttttatctttgatatcttcaattttcta 22613882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 534
Target Start/End: Original strand, 15268138 - 15268198
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||||||| ||||||| ||| ||||||||||||| || ||| |||||||||||||||||    
T  15268138 tagttgactccgacacacgtattaatgcatatgttttatttttaatatcttcaattctcta 15268198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 39405764 - 39405852
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| |||||||||  | ||||| | ||||||||||  || |||| || |||||||||||||| |||||| |||||||||||||||||    
T  39405764 tactccctccgtcccatattaaatgatctagttgacttcgagacacgtaccaatgcatatgttttatctttaatatcttcaattctcta 39405852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 534
Target Start/End: Original strand, 21961256 - 21961315
Alignment:
Q  475 agttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||| ||||||||||||| ||||||||| |||||| ||||||| |||| ||||    
T  21961256 agttgactctgtcacacatatcaattcatatgttttatctttaatatctttaattatcta 21961315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 29627393 - 29627428
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  29627393 actcatcgagacgaatccaacaacatcttacatgat 29627428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 32334774 - 32334739
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  32334774 actcatcgagacgaatccaacaacatcttacatgat 32334739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 38698088 - 38698123
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  38698088 actcatcgagacgaatccaacaacatcttacatgat 38698123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 40512816 - 40512781
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  40512816 actcatcgagacgaatccaacaacatcttacatgat 40512781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 42148432 - 42148467
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  42148432 actcatcgagacgaatccaacaacatcttacatgat 42148467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 1830782 - 1830815
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  1830782 tcatcgagacgaatccaacaacatcttacatgat 1830815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 4924972 - 4924939
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  4924972 tcatcgagacgaatccaacaacatcttacatgat 4924939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 5213056 - 5213023
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  5213056 tcatcgagacgaatccaacaacatcttacatgat 5213023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 571 - 604
Target Start/End: Original strand, 5364545 - 5364578
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatg 604  Q
    ||||||||||||||||||||||||||||||||||    
T  5364545 actcatcgagacgaatccaacaacatcttacatg 5364578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 505
Target Start/End: Original strand, 16954688 - 16954749
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatat 505  Q
    ||||||| |||||||||| |||| || || |||||||||||||||||| || ||||||||||    
T  16954688 aatactccctccgtccctcaatagatgacttagttgactctgacacacgtaccaatgcatat 16954749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 19868918 - 19868857
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||| ||||||| || |||||||||||||| ||||||| ||| ||||||| |||||    
T  19868918 tagttgactccgacacacgtaccaatgcatatgttttatctttgctattttcaattgtctac 19868857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 37516272 - 37516305
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  37516272 tcatcgagacgaatccaacaacatcttacatgat 37516305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 37843709 - 37843676
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  37843709 tcatcgagacgaatccaacaacatcttacatgat 37843676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 39036537 - 39036570
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  39036537 tcatcgagacgaatccaacaacatcttacatgat 39036570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 40316249 - 40316282
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  40316249 tcatcgagacgaatccaacaacatcttacatgat 40316282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 41411291 - 41411258
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  41411291 tcatcgagacgaatccaacaacatcttacatgat 41411258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 575 - 606
Target Start/End: Original strand, 23988706 - 23988737
Alignment:
Q  575 atcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||    
T  23988706 atcgagacgaatccaacaacatcttacatgat 23988737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 534
Target Start/End: Original strand, 24520242 - 24520296
Alignment:
Q  479 gactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| ||||||| |||||||| |||||||| || |||||||||||||||||||||    
T  24520242 gactccgacacacgtatcaatgtatatgttttat-tttgatatcttcaattctcta 24520296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 32002150 - 32002115
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||| |||||||||||||||||||||||    
T  32002150 actcatcgagacaaatccaacaacatcttacatgat 32002115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 534
Target Start/End: Original strand, 32300599 - 32300658
Alignment:
Q  475 agttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||| |||| |||||||||||||| ||| |||||| ||||||| |||| ||||    
T  32300599 agttgactctgtcacaaatatcaatgcatattttttatctttaatatctttaattatcta 32300658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 39894906 - 39894941
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||||||| |||||    
T  39894906 actcatcgagacgaatccaacaacatcttatatgat 39894941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 573 - 603
Target Start/End: Original strand, 15268238 - 15268268
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacat 603  Q
    |||||||||||||||||||||||||||||||    
T  15268238 tcatcgagacgaatccaacaacatcttacat 15268268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 471 - 529
Target Start/End: Original strand, 25563525 - 25563583
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaatt 529  Q
    ||||||||||||   |||||| |  |||||||||||||| |||||||||||||||||||    
T  25563525 acctagttgacttcaacacacgttccaatgcatatgttttatctttgatatcttcaatt 25563583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 573 - 603
Target Start/End: Original strand, 35290413 - 35290443
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacat 603  Q
    |||||||||||||||||||||||||||||||    
T  35290413 tcatcgagacgaatccaacaacatcttacat 35290443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 2864081 - 2864114
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||||| |||||    
T  2864081 tcatcgagacgaatccaacaacatcttatatgat 2864114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 14475364 - 14475331
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||| |||||||||||||||||||||    
T  14475364 tcatcgagacgattccaacaacatcttacatgat 14475331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 16048212 - 16048245
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||| |||||||||||||||||||||    
T  16048212 tcatcgagacgattccaacaacatcttacatgat 16048245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 16954750 - 16954783
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||| |||||||||    
T  16954750 tcatcgagacgaatccaacaacattttacatgat 16954783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 531
Target Start/End: Complemental strand, 19088003 - 19087946
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    |||||||||| ||||||| || ||||||||| |||| || | ||||||||||||||||    
T  19088003 tagttgactccgacacacgtaccaatgcataagttttatttatgatatcttcaattct 19087946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 19868820 - 19868787
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||| |||||||||||||||    
T  19868820 tcatcgagacgaatccaataacatcttacatgat 19868787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 19889780 - 19889813
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||| |||||||||||    
T  19889780 tcatcgagacgaatccaacaacgtcttacatgat 19889813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 600
Target Start/End: Complemental strand, 35448133 - 35448104
Alignment:
Q  571 actcatcgagacgaatccaacaacatctta 600  Q
    ||||||||||||||||||||||||||||||    
T  35448133 actcatcgagacgaatccaacaacatctta 35448104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 39405891 - 39405924
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||| |||||||||||||||||||||    
T  39405891 tcatcgagacgattccaacaacatcttacatgat 39405924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 43517194 - 43517161
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||| |||||||||||||||    
T  43517194 tcatcgagacgaatccaataacatcttacatgat 43517161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 1e-36; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 18718238 - 18718328
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18718238 atactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatctttgatatcttcaattctctac 18718328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 14372076 - 14372166
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  14372076 atactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 14372166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 23671375 - 23671465
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  23671375 atactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 23671465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 443 - 535
Target Start/End: Complemental strand, 40425513 - 40425421
Alignment:
Q  443 aaatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  40425513 aaatactccctccgtccctaaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 40425421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 444 - 535
Target Start/End: Original strand, 42038521 - 42038612
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  42038521 aatactccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 42038612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 534
Target Start/End: Original strand, 34826911 - 34827000
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||    
T  34826911 atactccctccgtccctaaataaatgacctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctcta 34827000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 27559575 - 27559663
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  27559575 tactccctccgtccctaaataaatgatctagttgactctgacacacatatcaatgtatatgttttatctttgatatcttcaattctcta 27559663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 452 - 531
Target Start/End: Complemental strand, 14707789 - 14707710
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  14707789 ctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattct 14707710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 445 - 535
Target Start/End: Complemental strand, 41173019 - 41172929
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||    
T  41173019 atactccctccgtccctaaataaatgacctacttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctac 41172929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 3987493 - 3987404
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  3987493 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctac 3987404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 441 - 534
Target Start/End: Complemental strand, 4045499 - 4045406
Alignment:
Q  441 ttaaatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||||||| |||||||||||||||||| |  | ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  4045499 ttaaatactccctccgtccctaaataaatgatttggttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 4045406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 444 - 535
Target Start/End: Original strand, 20517417 - 20517508
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| ||||||| |||||||||| || || |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  20517417 aatactccctccgtctctaaataaatgacataattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 20517508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 7443152 - 7443063
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| ||||| | ||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  7443152 tactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 7443063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 44283540 - 44283451
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||| ||||||||| |||||||||| ||||||||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  44283540 tactccctccgtccttaaataaatgacctagttgattctgacacacataccaatgcatatattttatctttgatatcttcaattctctac 44283451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 461 - 534
Target Start/End: Original strand, 44330399 - 44330472
Alignment:
Q  461 taaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  44330399 taaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 44330472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 447 - 535
Target Start/End: Complemental strand, 41463777 - 41463689
Alignment:
Q  447 actctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||| |||||||||| ||||||| ||||||||||||| ||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  41463777 actccctccgtccctcaataaatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 41463689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 452 - 535
Target Start/End: Complemental strand, 16942066 - 16941983
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||||||| | |||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||    
T  16942066 ctccgtcgctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctac 16941983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 452 - 535
Target Start/End: Complemental strand, 17012731 - 17012648
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||||||| | |||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||    
T  17012731 ctccgtcgctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctac 17012648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 445 - 535
Target Start/End: Complemental strand, 9877345 - 9877255
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||| |||| || ||||||||||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||||    
T  9877345 atactccctccgtccctcaatagatgacctagttgactctgacacacgtgtgaatgcatatgttttatctttgatatctttaattctctac 9877255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 30708727 - 30708817
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| ||||||| || ||||| | |||||||||||| |||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  30708727 atactccctccgtctctgaataagtgacctagttgactttgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 30708817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 445 - 535
Target Start/End: Complemental strand, 32776162 - 32776072
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||| |||| || ||||||||||||| || |||| || |||||||||||||| |||||||||||||||||||||||||    
T  32776162 atactccctccgtcccttaatagatgacctagttgactccgatacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 32776072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 453 - 524
Target Start/End: Complemental strand, 38588143 - 38588072
Alignment:
Q  453 tccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatctt 524  Q
    ||||||||||||||||| | |||||||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  38588143 tccgtccctaaataaatgatctagttgactctgatacacataccaatgcatatgttttatctttgatatctt 38588072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 461 - 535
Target Start/End: Complemental strand, 36199197 - 36199123
Alignment:
Q  461 taaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||| | ||||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||||    
T  36199197 taaataaatgatctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcgattctctac 36199123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 40598128 - 40598216
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| |||||||||  | ||||| | ||||||||||  ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  40598128 tactccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 40598216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 531
Target Start/End: Original strand, 4083234 - 4083292
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    ||||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  4083234 ctagttgactccgacacacatatcaatgcatatgttttatctttaatatctttaattct 4083292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 38963518 - 38963608
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||| ||| |||| || |||||||| |||  ||||||| || |||||||||||||| ||||||||| |||||||||||||||    
T  38963518 atactccctccgttccttaatagatgacctagttaacttcgacacacgtaccaatgcatatgttttatctttgatttcttcaattctctac 38963608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 473 - 535
Target Start/End: Complemental strand, 38137764 - 38137702
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||| ||||||| ||  ||||||||||||| |||||||||||||||||||| ||||    
T  38137764 ctagttgactccgacacacgtacaaatgcatatgttttatctttgatatcttcaattccctac 38137702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 473 - 535
Target Start/End: Original strand, 40898667 - 40898729
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||| ||||||| ||  |||| |||||||| |||||||||||||||||||||||||    
T  40898667 ctagttgactccgacacacgtactaatgtatatgttttatctttgatatcttcaattctctac 40898729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 535
Target Start/End: Complemental strand, 24283210 - 24283130
Alignment:
Q  455 cgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||| || |||||||||  || ||||||| ||   |||||||||||| |||||||||||||||||||||||||    
T  24283210 cgtccctcaatagatgacctagttgtttccgacacacgtactgatgcatatgttttatctttgatatcttcaattctctac 24283130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 3987368 - 3987333
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  3987368 actcatcgagacgaatccaacaacatcttacatgat 3987333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 14707670 - 14707635
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  14707670 actcatcgagacgaatccaacaacatcttacatgat 14707635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 18718364 - 18718399
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  18718364 actcatcgagacgaatccaacaacatcttacatgat 18718399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 20517543 - 20517578
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  20517543 actcatcgagacgaatccaacaacatcttacatgat 20517578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 27559700 - 27559735
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  27559700 actcatcgagacgaatccaacaacatcttacatgat 27559735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 496 - 535
Target Start/End: Complemental strand, 30776404 - 30776365
Alignment:
Q  496 caatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  30776404 caatgcatatgttttatctttgatatcttcaattctctac 30776365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 34827037 - 34827072
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  34827037 actcatcgagacgaatccaacaacatcttacatgat 34827072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 36199087 - 36199052
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  36199087 actcatcgagacgaatccaacaacatcttacatgat 36199052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 41172893 - 41172858
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  41172893 actcatcgagacgaatccaacaacatcttacatgat 41172858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 44330509 - 44330544
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  44330509 actcatcgagacgaatccaacaacatcttacatgat 44330544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 4045977 - 4046010
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  4045977 tcatcgagacgaatccaacaacatcttacatgat 4046010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 7443025 - 7442992
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  7443025 tcatcgagacgaatccaacaacatcttacatgat 7442992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 30708855 - 30708888
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  30708855 tcatcgagacgaatccaacaacatcttacatgat 30708888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 39418154 - 39418121
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  39418154 tcatcgagacgaatccaacaacatcttacatgat 39418121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 497 - 534
Target Start/End: Complemental strand, 43925291 - 43925254
Alignment:
Q  497 aatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  43925291 aatgcatatgttttatctttgatatcttcaattctcta 43925254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 571 - 603
Target Start/End: Complemental strand, 16941947 - 16941915
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacat 603  Q
    |||||||||||||||||||||||||||||||||    
T  16941947 actcatcgagacgaatccaacaacatcttacat 16941915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 571 - 603
Target Start/End: Complemental strand, 17012612 - 17012580
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacat 603  Q
    |||||||||||||||||||||||||||||||||    
T  17012612 actcatcgagacgaatccaacaacatcttacat 17012580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 500 - 535
Target Start/End: Original strand, 332330 - 332365
Alignment:
Q  500 gcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||| |||||||||||||||||||||||||    
T  332330 gcatatgttttatctttgatatcttcaattctctac 332365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 516
Target Start/End: Complemental strand, 5030525 - 5030462
Alignment:
Q  453 tccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatcttt 516  Q
    ||||||| | |||| || |||||||||||| ||||||||||| |||||||||| ||| ||||||    
T  5030525 tccgtccgttaatagatgacctagttgactttgacacacataccaatgcatattttttatcttt 5030462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 23671501 - 23671536
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||||||| |||||    
T  23671501 actcatcgagacgaatccaacaacatcttatatgat 23671536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 575 - 606
Target Start/End: Complemental strand, 40425381 - 40425350
Alignment:
Q  575 atcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||    
T  40425381 atcgagacgaatccaacaacatcttacatgat 40425350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 575 - 606
Target Start/End: Complemental strand, 42020336 - 42020305
Alignment:
Q  575 atcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||    
T  42020336 atcgagacgaatccaacaacatcttacatgat 42020305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 42038648 - 42038683
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||||||| |||||    
T  42038648 actcatcgagacgaatccaacaacatcttatatgat 42038683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 575 - 606
Target Start/End: Complemental strand, 44283411 - 44283380
Alignment:
Q  575 atcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||    
T  44283411 atcgagacgaatccaacaacatcttacatgat 44283380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 18734061 - 18734027
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatga 605  Q
    ||||||||||||||||| |||||||||||||||||    
T  18734061 actcatcgagacgaatcaaacaacatcttacatga 18734027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 535
Target Start/End: Complemental strand, 39418254 - 39418192
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||  ||||||| || |||| ||||| ||| ||||||||||||||||||| |||||    
T  39418254 ctagttgacttcgacacacttaccaatacatatattttatctttgatatcttcaattatctac 39418192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 531
Target Start/End: Original strand, 42951367 - 42951425
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    ||||||||||| ||||||| |||||||| |||||||| || |||||||| ||| |||||    
T  42951367 ctagttgactccgacacacgtatcaatgtatatgttttatttttgatattttctattct 42951425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 4045367 - 4045334
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||| |||||||||    
T  4045367 tcatcgagacgaatccaacaacattttacatgat 4045334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 535
Target Start/End: Original strand, 4045878 - 4045939
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| ||||||| || ||  ||||||||||||| |||||||||||||| |||| |||||    
T  4045878 tagttgattctgacatacgtactaatgcatatgttttatctttgatatctttaattttctac 4045939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 9877217 - 9877184
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||||| |||||    
T  9877217 tcatcgagacgaatccaacaacatcttatatgat 9877184  T

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Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 13399338 - 13399277
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||| |||  || ||||||||| |||| || ||| ||||||||||||||||||    
T  13399338 tagttgactctgatacatgtaccaatgcatacgttttattttttatatcttcaattctctac 13399277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 575 - 604
Target Start/End: Original strand, 14372206 - 14372235
Alignment:
Q  575 atcgagacgaatccaacaacatcttacatg 604  Q
    ||||||||||||||||||||||||||||||    
T  14372206 atcgagacgaatccaacaacatcttacatg 14372235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 24283094 - 24283061
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||| ||||||||||||||||||||||||||||    
T  24283094 tcatcaagacgaatccaacaacatcttacatgat 24283061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 30776327 - 30776294
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||| |||||||    
T  30776327 tcatcgagacgaatccaacaacatctcacatgat 30776294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 36931746 - 36931713
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||||| |||||    
T  36931746 tcatcgagacgaatccaacaacatcttatatgat 36931713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 40598256 - 40598289
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||| |||||||||||||||||||||    
T  40598256 tcatcgagacgattccaacaacatcttacatgat 40598289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 577 - 606
Target Start/End: Complemental strand, 41463647 - 41463618
Alignment:
Q  577 cgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||    
T  41463647 cgagacgaatccaacaacatcttacatgat 41463618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 5e-36; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 45081812 - 45081901
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  45081812 tactccctccgtccctaaataaataacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 45081901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 443 - 534
Target Start/End: Original strand, 38845197 - 38845288
Alignment:
Q  443 aaatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  38845197 aaatactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 38845288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 29790942 - 29791031
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  29790942 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 29791031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 444 - 535
Target Start/End: Original strand, 40013649 - 40013740
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  40013649 aatactccctccgtcccttaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 40013740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 30289923 - 30290013
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  30289923 atactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctac 30290013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 443 - 535
Target Start/End: Complemental strand, 3293366 - 3293274
Alignment:
Q  443 aaatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||| |||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  3293366 aaatactccctccgtccctaaataaatgatctagttgactctgacacatataccaatgcatatgttttatctttgatatcttcaattctctac 3293274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 444 - 535
Target Start/End: Complemental strand, 2805739 - 2805648
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  2805739 aatactccctccgtccctaaataaatgacccagttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctac 2805648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 452 - 531
Target Start/End: Original strand, 43066133 - 43066212
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  43066133 ctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattct 43066212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 1581026 - 1580937
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||    
T  1581026 tactccctccgtccctgaataaatgacctagttgactctgacacacgtatcaatgcatatattttatctttgatatcttcaattctctac 1580937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 534
Target Start/End: Original strand, 37709898 - 37709987
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||| ||||||||||||||||||||||||    
T  37709898 atactccctccgtccctaaataaatgacctagttgactctaacacacataccaatgtatatgttttatctttgatatcttcaattctcta 37709987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 443 - 535
Target Start/End: Original strand, 30380527 - 30380619
Alignment:
Q  443 aaatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||| |||||||||||||||| | | ||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  30380527 aaatactccctccgtccctaaataagtgatctaattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 30380619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 38739657 - 38739745
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||    
T  38739657 tactccctccgtccttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctcta 38739745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 535
Target Start/End: Original strand, 6470853 - 6470934
Alignment:
Q  454 ccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||| |||| || ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  6470853 ccgtccctcaatatatgacctagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctac 6470934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 13138393 - 13138304
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| ||| |||||| ||||||| ||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  13138393 tactccctctgtccctcaataaatgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 13138304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 445 - 535
Target Start/End: Complemental strand, 8351142 - 8351052
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||||||||| | | ||||||||||||||||||| || || ||||||||||| |||||||||||||||||||||||||    
T  8351142 atactccctccgtccctaaataagtgatctagttgactctgacacacgtaccagtgcatatgttttatctttgatatcttcaattctctac 8351052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 444 - 535
Target Start/End: Original strand, 2986337 - 2986427
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| ||||||| || ||||| | |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  2986337 aatactccctccgtctctgaataagtgacctagttgactctgacacacataccaatgcatatgttttatc-ttgatatcttcaattctctac 2986427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 452 - 535
Target Start/End: Original strand, 23248783 - 23248866
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||| ||| ||||||||| |||||||||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  23248783 ctccctccttaaataaatgacctagttgactctaacacatatatcaatgcatatgttttatctttgatatattcaattctctac 23248866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 39361128 - 39361214
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||| ||||||||||| | ||||   ||||||||||||||| |||||||||||||| || ||||||||||||||||||||||    
T  39361128 tactctctccgttcctaaataaatgatctag---actctgacacacataccaatgcatatgttttatttttgatatcttcaattctctac 39361214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 444 - 535
Target Start/End: Original strand, 44123671 - 44123762
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||||||  | || || | ||||||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  44123671 aatactctctccgtcccatattagatgatctagttgactccgacacacgtatcaatgcatatgttttatctttgaaatcttcaattctctac 44123762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 474 - 535
Target Start/End: Original strand, 12893559 - 12893620
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  12893559 tagttgactccgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctac 12893620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 535
Target Start/End: Original strand, 14522377 - 14522469
Alignment:
Q  443 aaatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||| || | ||||| |||| || | |||||||| | | |||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  14522377 aaatactcccttcatccctcaatagatgatctagttgattttaacacacgtatcaatgcatatgttttatctttgatatcttcaattctctac 14522469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 23764713 - 23764623
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacaca-catatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||||||  |||||||| ||||||||||  |||||| | || |||||||||||||| || |||||||| |||||||||||||    
T  23764713 tactctctccgtccctcgataaataatctagttgacttcgacacaacgtaccaatgcatatgttttatatttgatatattcaattctctac 23764623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 471 - 532
Target Start/End: Complemental strand, 9302589 - 9302528
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctc 532  Q
    ||||| ||||||||| ||||||||| |||| |||||||| ||||||||||||||||||||||    
T  9302589 acctaattgactctggcacacatataaatgtatatgttttatctttgatatcttcaattctc 9302528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 471 - 535
Target Start/End: Complemental strand, 886303 - 886239
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||| |||||||| ||||||| || |||||||||||||| |||||||||||||| ||||||||||    
T  886303 acctggttgactccgacacacgtaccaatgcatatgttttatctttgatatctttaattctctac 886239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 474 - 534
Target Start/End: Complemental strand, 31128038 - 31127978
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||||||  ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  31128038 tagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 31127978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 444 - 535
Target Start/End: Original strand, 45253747 - 45253839
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgac-acacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| ||| |||||| |||| || | ||||||||||| ||| |||| || |||||||||||||| || ||||||||||||||||||||||    
T  45253747 aatactccctctgtcccttaatagatgatctagttgactccgacgacacgtaccaatgcatatgttttatttttgatatcttcaattctctac 45253839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 473 - 535
Target Start/End: Original strand, 25256361 - 25256423
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||| |||||  ||| ||||||| |||||| |||||||||||||||||||||||||    
T  25256361 ctagttgactccgacacttataccaatgcaaatgttttatctttgatatcttcaattctctac 25256423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 534
Target Start/End: Original strand, 18809315 - 18809364
Alignment:
Q  485 gacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  18809315 gacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 18809364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 2805612 - 2805577
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  2805612 actcatcgagacgaatccaacaacatcttacatgat 2805577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 3293237 - 3293202
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  3293237 actcatcgagacgaatccaacaacatcttacatgat 3293202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 23248902 - 23248937
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  23248902 actcatcgagacgaatccaacaacatcttacatgat 23248937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 30380655 - 30380690
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  30380655 actcatcgagacgaatccaacaacatcttacatgat 30380690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 38739782 - 38739817
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  38739782 actcatcgagacgaatccaacaacatcttacatgat 38739817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 38845732 - 38845767
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  38845732 actcatcgagacgaatccaacaacatcttacatgat 38845767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 1580899 - 1580866
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  1580899 tcatcgagacgaatccaacaacatcttacatgat 1580866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 2986452 - 2986485
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  2986452 tcatcgagacgaatccaacaacatcttacatgat 2986485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 6470748 - 6470715
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  6470748 tcatcgagacgaatccaacaacatcttacatgat 6470715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 6470972 - 6471005
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  6470972 tcatcgagacgaatccaacaacatcttacatgat 6471005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 8351014 - 8350981
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  8351014 tcatcgagacgaatccaacaacatcttacatgat 8350981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 535
Target Start/End: Original strand, 10658006 - 10658067
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||| ||||||  || |||  ||||||||| |||||||||||||||||||||||||    
T  10658006 tagttgactccgacacatgtaccaacacatatgttttatctttgatatcttcaattctctac 10658067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 473 - 534
Target Start/End: Original strand, 11854551 - 11854612
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||  ||||||| || |||||||||| ||| || |||||||||||||||||||||    
T  11854551 ctagttgacttcgacacacgtaccaatgcatatattttatttttgatatcttcaattctcta 11854612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 13138266 - 13138233
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  13138266 tcatcgagacgaatccaacaacatcttacatgat 13138233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 14847210 - 14847295
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    ||||| || |||||||  ||| || |||||||||| || |||||||  | |||||||||||||| |||||||||||||| ||||||    
T  14847210 tactccctacgtccctcgatagatgacctagttgattccgacacacgcaccaatgcatatgttttatctttgatatctttaattct 14847295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 20167711 - 20167678
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  20167711 tcatcgagacgaatccaacaacatcttacatgat 20167678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 23248979 - 23249012
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  23248979 tcatcgagacgaatccaacaacatcttacatgat 23249012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 29791069 - 29791102
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  29791069 tcatcgagacgaatccaacaacatcttacatgat 29791102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 43066253 - 43066286
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  43066253 tcatcgagacgaatccaacaacatcttacatgat 43066286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 574 - 606
Target Start/End: Original strand, 45081940 - 45081972
Alignment:
Q  574 catcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||||||||||    
T  45081940 catcgagacgaatccaacaacatcttacatgat 45081972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 575 - 606
Target Start/End: Original strand, 30290053 - 30290084
Alignment:
Q  575 atcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||    
T  30290053 atcgagacgaatccaacaacatcttacatgat 30290084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 37710024 - 37710059
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||| ||||||||||||||||||||||||||    
T  37710024 actcatcgaaacgaatccaacaacatcttacatgat 37710059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 39361250 - 39361285
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||||||| |||||    
T  39361250 actcatcgagacgaatccaacaacatcttatatgat 39361285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 40013776 - 40013811
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||| |||||||||||||||||||    
T  40013776 actcatcgagacgaattcaacaacatcttacatgat 40013811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 14522507 - 14522540
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||| ||||||||||||||||||||||||||||    
T  14522507 tcatcaagacgaatccaacaacatcttacatgat 14522540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 20671550 - 20671517
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||||| |||||    
T  20671550 tcatcgagacgaatccaacaacatcttatatgat 20671517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 23764583 - 23764550
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||| |||||||||||||||||||    
T  23764583 tcatcgagacgaattcaacaacatcttacatgat 23764550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 31127939 - 31127906
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||| |||||||||||||||||||||    
T  31127939 tcatcgagacgattccaacaacatcttacatgat 31127906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 443 - 535
Target Start/End: Complemental strand, 3901403 - 3901311
Alignment:
Q  443 aaatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  3901403 aaatactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 3901311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 444 - 535
Target Start/End: Complemental strand, 46212613 - 46212522
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  46212613 aatactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 46212522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 46803630 - 46803720
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  46803630 atactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 46803720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 446 - 534
Target Start/End: Complemental strand, 5744344 - 5744256
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  5744344 tactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgtatatgttttatctttgatatcttcaattctcta 5744256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 452 - 535
Target Start/End: Original strand, 6494594 - 6494677
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  6494594 ctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatctttaatatcttcaattctctac 6494677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 28166273 - 28166363
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  28166273 atactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 28166363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 445 - 535
Target Start/End: Complemental strand, 45198602 - 45198512
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  45198602 atactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 45198512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 47579286 - 47579376
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  47579286 atactccctccgtccctaaataaatgacctagttgactcttacacacataccaatgcatatgttttatctttgatatcttcaattctctac 47579376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 3442605 - 3442516
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  3442605 tactccctccgtccctaaataaatgacatagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 3442516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 534
Target Start/End: Original strand, 5735270 - 5735359
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||| |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  5735270 atactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 5735359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 21859180 - 21859091
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||||||||||    
T  21859180 tactccctccgtccctaaataaataacctagttgactctgacacacataccaatacatatgttttatctttgatattttcaattctctac 21859091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 21915043 - 21914954
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||||||||||    
T  21915043 tactccctccgtccctaaataaataacctagttgactctgacacacataccaatacatatgttttatctttgatattttcaattctctac 21914954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 444 - 535
Target Start/End: Complemental strand, 26205967 - 26205876
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||||||||||||||| | |||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  26205967 aatactccctccgtccctaaataaatgatctagttgactcttacacacataccaatgcatatgttttatctttgatatcttcaattctctac 26205876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 39786617 - 39786528
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| |||| || ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  39786617 tactccctccgtccctcaatagatgacctagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctac 39786528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 4264134 - 4264222
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  4264134 tactccctccgtccctcaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattatcta 4264222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 443 - 535
Target Start/End: Original strand, 28151988 - 28152080
Alignment:
Q  443 aaatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||    
T  28151988 aaatcctccctccgtccttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatatttgatatcttcaattctctac 28152080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 452 - 535
Target Start/End: Complemental strand, 37688288 - 37688205
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||||||| | |||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  37688288 ctccgtccctaaataaatgatctagatgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 37688205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 452 - 535
Target Start/End: Original strand, 49768451 - 49768534
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||||||| || ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  49768451 ctccgtccctaaataaatgacttagttgactatgacatacatatcaatgcatatgttttatctttgatatcttcaattctctac 49768534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 453 - 535
Target Start/End: Complemental strand, 7739073 - 7738991
Alignment:
Q  453 tccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||||||| |||||||||||||    
T  7739073 tccgtccctaaataaatgacctagttgactccgacacacgtatcaatgcatatgttttatctttgatatattcaattctctac 7738991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 452 - 535
Target Start/End: Complemental strand, 20678842 - 20678759
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||||||| | |||||||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||||||    
T  20678842 ctccgtccctaaataaatgatctagttgactctgacacatatatcaatgcatatattttatctttgatattttcaattctctac 20678759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 18360234 - 18360145
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| |||| || ||||||||||||||||| ||| || |||||||||||||| |||||||||||||||||||||||||    
T  18360234 tactccctccgtccctcaatagatgacctagttgactctgacgcacgtaccaatgcatatgttttatctttgatatcttcaattctctac 18360145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 36602694 - 36602783
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| |||| || ||||||||||||||||| ||| || |||||||||||||| |||||||||||||||||||||||||    
T  36602694 tactccctccgtccctcaatagatgacctagttgactctgacgcacgtaccaatgcatatgttttatctttgatatcttcaattctctac 36602783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 442 - 534
Target Start/End: Complemental strand, 55190979 - 55190887
Alignment:
Q  442 taaatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||  |||||||||| |||| || ||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||| ||||    
T  55190979 taaatacttcctccgtccctcaatagatgacctagttgactctgacacacttaccaatgcatatgttttatctttgatatcttcaattatcta 55190887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 4209363 - 4209452
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| |||| || | ||||||||||||||||||| || |||| ||||||||| |||||||||||||||||||||||||    
T  4209363 tactccctccgtccctcaatagatgatctagttgactctgacacacgtaccaatacatatgttttatctttgatatcttcaattctctac 4209452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 23255935 - 23256024
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| |||| || ||||||||||||||||||||| || |||||||||| ||| || ||||||||||||||||||||||    
T  23255935 tactccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatattttatatttgatatcttcaattctctac 23256024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 463 - 535
Target Start/End: Original strand, 1377049 - 1377121
Alignment:
Q  463 aataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| || ||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  1377049 aataaatgacgtagttgactatgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 1377121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 444 - 535
Target Start/End: Original strand, 50033018 - 50033109
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||||||  | || || || |||||||||| ||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  50033018 aatactctctccgtcccatattagatgacttagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 50033109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 444 - 535
Target Start/End: Original strand, 50035537 - 50035628
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||||||  | || || | ||||||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  50035537 aatactctctccgtcccatattagatgatctagttgactccgacacacgtatcaatgcatatgttttatctttgaaatcttcaattctctac 50035628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 472 - 531
Target Start/End: Original strand, 53568380 - 53568439
Alignment:
Q  472 cctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  53568380 cctagttgactccgacacacatatcaatgcatatgttttatctttgatatcttcaattct 53568439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 445 - 535
Target Start/End: Complemental strand, 5123419 - 5123329
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||| ||||| |||| || || |||||||||||||||||| || |||||||||||||| ||||||||||||||||||| |||||    
T  5123419 atactccctccatccctcaatagatgacttagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattatctac 5123329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 445 - 534
Target Start/End: Complemental strand, 19634110 - 19634021
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||| || ||||||| |||| || | ||||||||||| ||||||| || |||| ||||||||| ||||||||||||||||||||||||    
T  19634110 atactcccttcgtcccttaatagatgatctagttgactccgacacacgtaccaattcatatgttttatctttgatatcttcaattctcta 19634021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 535
Target Start/End: Complemental strand, 19652519 - 19652427
Alignment:
Q  443 aaatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||  |||||||||| |||| || | ||||||||||| |||| || || |||| ||||||||| |||||||||||||||||||||||||    
T  19652519 aaatacttcctccgtccctcaatatatgatctagttgactccgacatacgtaccaattcatatgttttatctttgatatcttcaattctctac 19652427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 471 - 535
Target Start/End: Complemental strand, 19731401 - 19731337
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||| ||||||| || |||||||||||||| |||||||||||||||||| ||||||    
T  19731401 acctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaatgctctac 19731337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 477 - 535
Target Start/End: Complemental strand, 3443617 - 3443559
Alignment:
Q  477 ttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||||| ||  ||||||||||||| |||||||||||||||||||||||||    
T  3443617 ttgactctgacacacgtacaaatgcatatgttttatctttgatatcttcaattctctac 3443559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 445 - 535
Target Start/End: Complemental strand, 19170801 - 19170711
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||| |||| || ||||||||||||  ||||||  || |||||||||| ||| |||||| ||||||||||||||||||    
T  19170801 atactcgctccgtccctcaatagatgacctagttgacttcgacacatgtaccaatgcatatattttatctttaatatcttcaattctctac 19170711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 465 - 531
Target Start/End: Complemental strand, 19525956 - 19525890
Alignment:
Q  465 taaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    ||||| ||||||||||||  ||||||| || |||||||||||||| |||||||||||||||||||||    
T  19525956 taaatgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattct 19525890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 444 - 530
Target Start/End: Complemental strand, 51737216 - 51737130
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattc 530  Q
    |||||||||||||||||  | || ||||||| |||||||| ||||||| || |||||||||||||| |||||| |||| ||||||||    
T  51737216 aatactctctccgtcccatattagataaccttgttgactccgacacacgtaccaatgcatatgttttatcttttatattttcaattc 51737130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 473 - 534
Target Start/End: Complemental strand, 6923174 - 6923113
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||  ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  6923174 ctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 6923113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 19631339 - 19631396
Alignment:
Q  477 ttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||| ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  19631339 ttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 19631396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 473 - 534
Target Start/End: Original strand, 25644386 - 25644447
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||  ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  25644386 ctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 25644447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 455 - 535
Target Start/End: Complemental strand, 39260383 - 39260303
Alignment:
Q  455 cgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||| || | ||||||||||||||||||  || |||| ||||| ||| |||||||||||||||||||||||||    
T  39260383 cgtccctcaatagatgatctagttgactctgacacatgtaccaatacatatattttatctttgatatcttcaattctctac 39260303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 474 - 529
Target Start/End: Complemental strand, 23603880 - 23603825
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaatt 529  Q
    |||||||||||||||||| || |||||||| ||||| |||||||||||||||||||    
T  23603880 tagttgactctgacacacgtaccaatgcatctgttttatctttgatatcttcaatt 23603825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 471 - 534
Target Start/End: Original strand, 26659865 - 26659928
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||||| ||||||  ||||| ||||||||||| | ||||||||||||||||||||||    
T  26659865 acctagttgactccgacacatgtatcactgcatatgttttagctttgatatcttcaattctcta 26659928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 516
Target Start/End: Complemental strand, 39195742 - 39195672
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatcttt 516  Q
    ||||| || ||||||| | || || ||||||||||||||||||||||||||||||||||| ||| ||||||    
T  39195742 tactcccttcgtcccttattagatgacctagttgactctgacacacatatcaatgcatattttttatcttt 39195672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 42187212 - 42187151
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||||| || || |||||||||| ||| |||||||||||||| ||||||||||    
T  42187212 tagttgactctgacatacgtaccaatgcatatattttatctttgatatctttaattctctac 42187151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 529
Target Start/End: Original strand, 55014284 - 55014345
Alignment:
Q  468 ataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaatt 529  Q
    |||||||||||||||| ||||||| ||  ||||||||||||| ||||||||||| |||||||    
T  55014284 ataacctagttgactccgacacacgtactaatgcatatgttttatctttgatatattcaatt 55014345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 478 - 534
Target Start/End: Original strand, 55997146 - 55997202
Alignment:
Q  478 tgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||| ||||||| || ||||||||| |||| ||||||||||||||||||||||||    
T  55997146 tgactccgacacacgtaccaatgcatacgttttatctttgatatcttcaattctcta 55997202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 1377157 - 1377192
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  1377157 actcatcgagacgaatccaacaacatcttacatgat 1377192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 3442480 - 3442445
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  3442480 actcatcgagacgaatccaacaacatcttacatgat 3442445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 3901275 - 3901240
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  3901275 actcatcgagacgaatccaacaacatcttacatgat 3901240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 4264259 - 4264294
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  4264259 actcatcgagacgaatccaacaacatcttacatgat 4264294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 5735396 - 5735431
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  5735396 actcatcgagacgaatccaacaacatcttacatgat 5735431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 5744219 - 5744184
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  5744219 actcatcgagacgaatccaacaacatcttacatgat 5744184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 21859055 - 21859020
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  21859055 actcatcgagacgaatccaacaacatcttacatgat 21859020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 21914918 - 21914883
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  21914918 actcatcgagacgaatccaacaacatcttacatgat 21914883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 26205840 - 26205805
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  26205840 actcatcgagacgaatccaacaacatcttacatgat 26205805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 28152116 - 28152151
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  28152116 actcatcgagacgaatccaacaacatcttacatgat 28152151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 28166399 - 28166434
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  28166399 actcatcgagacgaatccaacaacatcttacatgat 28166434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 37688169 - 37688134
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  37688169 actcatcgagacgaatccaacaacatcttacatgat 37688134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 534
Target Start/End: Original strand, 39193941 - 39194000
Alignment:
Q  475 agttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||||||||||||| |||||||||||||| ||| |||||| |||||||  ||||||||    
T  39193941 agttgactctgacacatatatcaatgcatatcttttatctttaatatctttcattctcta 39194000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 45198476 - 45198441
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  45198476 actcatcgagacgaatccaacaacatcttacatgat 45198441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 46212486 - 46212451
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  46212486 actcatcgagacgaatccaacaacatcttacatgat 46212451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 46803757 - 46803792
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  46803757 actcatcgagacgaatccaacaacatcttacatgat 46803792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 47579411 - 47579446
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  47579411 actcatcgagacgaatccaacaacatcttacatgat 47579446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 49768570 - 49768605
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  49768570 actcatcgagacgaatccaacaacatcttacatgat 49768605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 3443521 - 3443488
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  3443521 tcatcgagacgaatccaacaacatcttacatgat 3443488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 571 - 604
Target Start/End: Original strand, 6494713 - 6494746
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatg 604  Q
    ||||||||||||||||||||||||||||||||||    
T  6494713 actcatcgagacgaatccaacaacatcttacatg 6494746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 7738953 - 7738920
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  7738953 tcatcgagacgaatccaacaacatcttacatgat 7738920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 18360107 - 18360074
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  18360107 tcatcgagacgaatccaacaacatcttacatgat 18360074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 19170673 - 19170640
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  19170673 tcatcgagacgaatccaacaacatcttacatgat 19170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 19633983 - 19633950
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  19633983 tcatcgagacgaatccaacaacatcttacatgat 19633950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 36602821 - 36602854
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  36602821 tcatcgagacgaatccaacaacatcttacatgat 36602854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 39786491 - 39786458
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  39786491 tcatcgagacgaatccaacaacatcttacatgat 39786458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 42187113 - 42187080
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  42187113 tcatcgagacgaatccaacaacatcttacatgat 42187080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 50971586 - 50971619
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  50971586 tcatcgagacgaatccaacaacatcttacatgat 50971619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 571 - 603
Target Start/End: Original strand, 39194037 - 39194069
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacat 603  Q
    |||||||||||||||||||||||||||||||||    
T  39194037 actcatcgagacgaatccaacaacatcttacat 39194069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 474 - 534
Target Start/End: Original strand, 51736822 - 51736882
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||||||||||||||||||| ||||||||| ||| |||||| |||| || |||| ||||    
T  51736822 tagttgactctgacacacatattaatgcatatatttgatctttaatatgtttaattatcta 51736882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 534
Target Start/End: Original strand, 10181017 - 10181076
Alignment:
Q  475 agttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||| |||||||| |||| ||||||||| |||||| |||| ||||||| ||||    
T  10181017 agttgactctgtcacacataccaatacatatgttttatctttaatattttcaattatcta 10181076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 20678724 - 20678689
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||| |||||||||||||||||||||||||||||    
T  20678724 actcattgagacgaatccaacaacatcttacatgat 20678689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 471 - 505
Target Start/End: Original strand, 14958033 - 14958067
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatat 505  Q
    |||||||||||||||||||||||| ||||||||||    
T  14958033 acctagttgactctgacacacataccaatgcatat 14958067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 573 - 603
Target Start/End: Original strand, 23256062 - 23256092
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacat 603  Q
    |||||||||||||||||||||||||||||||    
T  23256062 tcatcgagacgaatccaacaacatcttacat 23256092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 535
Target Start/End: Original strand, 50971491 - 50971548
Alignment:
Q  477 ttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||||| || |||||||||||||| || |||||||| || ||||||||||    
T  50971491 ttgactctgacacacgtaccaatgcatatgttttat-tttgatatatttaattctctac 50971548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 19525848 - 19525815
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||| |||||||||||||||||||||    
T  19525848 tcatcgagacgattccaacaacatcttacatgat 19525815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 19631435 - 19631468
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||| ||||||||||||||||||||||||||||    
T  19631435 tcatcaagacgaatccaacaacatcttacatgat 19631468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 19652390 - 19652357
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||| |||||||||||||||||||    
T  19652390 tcatcgagacgaattcaacaacatcttacatgat 19652357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 25644486 - 25644519
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||| |||||||||||||||||||||    
T  25644486 tcatcgagacgattccaacaacatcttacatgat 25644519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 35064104 - 35064137
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||| ||||||||||||||||||    
T  35064104 tcatcgagacgaatcaaacaacatcttacatgat 35064137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 39195624 - 39195591
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||||| |||||    
T  39195624 tcatcgagacgaatccaacaacatcttatatgat 39195591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 39260266 - 39260233
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||| |||||||||||||||||||    
T  39260266 tcatcgagacgaattcaacaacatcttacatgat 39260233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 55190848 - 55190815
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||| ||||||||||||||||||||||||||||    
T  55190848 tcatcaagacgaatccaacaacatcttacatgat 55190815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 533
Target Start/End: Complemental strand, 27976780 - 27976744
Alignment:
Q  497 aatgcatatgtttcatctttgatatcttcaattctct 533  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  27976780 aatgcatatgttttatctttaatatcttcaattctct 27976744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 1e-33; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 36819696 - 36819785
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  36819696 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 36819785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 445 - 535
Target Start/End: Complemental strand, 32619204 - 32619114
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  32619204 atactccctccgtccctaaataaatgacttagttgactctgacacacatatcaatgcatatgttttatttttgatatcttcaattctctac 32619114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 19072769 - 19072858
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  19072769 tactccctccgtccctaaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 19072858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 42086899 - 42086810
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  42086899 tactccctccatccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 42086810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 452 - 535
Target Start/End: Complemental strand, 44479975 - 44479892
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  44479975 ctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 44479892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 2400284 - 2400374
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||    
T  2400284 atactccctccgtccctaaataaatgacctagttgactctgacacatataccaatgcatatgttttatctttgatatcttccattctctac 2400374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 453 - 535
Target Start/End: Complemental strand, 23474223 - 23474141
Alignment:
Q  453 tccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  23474223 tccgtccctaaataagtgacctagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctac 23474141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 445 - 535
Target Start/End: Complemental strand, 28185670 - 28185580
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |||||||||||||| ||||||||||    
T  28185670 atactccctccgtccctaaataaatgacctagttgactctgacacacataccaatacatatgttttatctttgatatctttaattctctac 28185580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 445 - 535
Target Start/End: Complemental strand, 37951207 - 37951117
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||    
T  37951207 atactccctccgtccataaataaatgacctagttgactctgacgcacataccaatgcatatgttttatctttgatatcttcaattctctac 37951117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 47080980 - 47081069
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||    
T  47080980 tactccctccgtccctaaatgaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttaaattctctac 47081069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 47713763 - 47713674
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||    
T  47713763 tactccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctac 47713674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 445 - 535
Target Start/End: Complemental strand, 36859470 - 36859380
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||| ||||||||||| ||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  36859470 atactccctccgttcctaaataaatgacctaattgactctaacacacataccaatgcatatgttttatctttgatatcttcaattctctac 36859380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 31466619 - 31466534
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||    
T  31466619 tactccctccgtccctaaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattct 31466534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 36905526 - 36905615
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  36905526 tactccctccgtccctaaataaatgatttagttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctac 36905615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 447 - 535
Target Start/End: Original strand, 31110625 - 31110711
Alignment:
Q  447 actctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||| |||||||||||||||||| |||||||||||||||  |||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  31110625 actccctccgtccctaaataaatgacctagttgactctg--acacatctcaatgcatatgttttatctttgatattttcaattctctac 31110711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 34478272 - 34478183
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||  | ||||||||||||||||||  ||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  34478272 tactccctccgtcccatattaaataacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 34478183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 445 - 531
Target Start/End: Complemental strand, 4612349 - 4612263
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    |||||| || ||||||||||||||| ||| |||||||||||||||| ||| |||||||||| ||| || ||||||||||||||||||    
T  4612349 atactccctacgtccctaaataaatgacccagttgactctgacacaaataccaatgcatatattttatgtttgatatcttcaattct 4612263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 42834553 - 42834468
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    ||||| ||||||| |||||||||| ||||| |||||| ||| ||||||| ||||| |||||||| |||||||||||||||||||||    
T  42834553 tactccctccgtctctaaataaatgacctatttgactttgatacacataccaatgtatatgttttatctttgatatcttcaattct 42834468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 474 - 535
Target Start/End: Original strand, 48531350 - 48531411
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||    
T  48531350 tagttgactctgacacacgtatcaatgcatatattttatctttgatatcttcaattctctac 48531411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 446 - 509
Target Start/End: Complemental strand, 47713840 - 47713777
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgttt 509  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||    
T  47713840 tactccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttt 47713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 473 - 535
Target Start/End: Original strand, 21392045 - 21392107
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||||    
T  21392045 ctagttgactctgacacacgtaccaatgcatatgttttatctttgatatctttaattctctac 21392107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 474 - 534
Target Start/End: Complemental strand, 10464348 - 10464288
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||| |||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  10464348 tagttgactttgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 10464288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 446 - 534
Target Start/End: Complemental strand, 37231825 - 37231737
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| |||||||||  | ||||| | ||||||||||  ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  37231825 tactccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 37231737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 468 - 535
Target Start/End: Complemental strand, 31497942 - 31497875
Alignment:
Q  468 ataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||||||||| ||||||||||  ||| ||||||||| ||||||||||||||||||| |||||    
T  31497942 ataacctagttgactccgacacacatactaatacatatgttttatctttgatatcttcaattatctac 31497875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 449 - 534
Target Start/End: Original strand, 4033294 - 4033379
Alignment:
Q  449 tctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||||| | || || | ||||||||||||||||||||||||||||||||| ||| |||||| |||| || |||| ||||    
T  4033294 tctctccgtcccttattagatgatctagttgactctgacacacatatcaatgcatattttttatctttaatatatttaattatcta 4033379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 446 - 534
Target Start/End: Complemental strand, 35501008 - 35500920
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| |||||||||  | ||||| | |||||| |||  ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  35501008 tactccctccgtcccatattaaatgatctagttaacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 35500920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 455 - 535
Target Start/End: Original strand, 47537932 - 47538012
Alignment:
Q  455 cgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| ||||||| | ||| |||| ||||| | || || |||||||||||||| |||||||||||||||||||||||||    
T  47537932 cgtccctcaataaatgatctaattgattctgatatacgtaccaatgcatatgttttatctttgatatcttcaattctctac 47538012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 534
Target Start/End: Original strand, 36643201 - 36643250
Alignment:
Q  485 gacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  36643201 gacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 36643250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 2400410 - 2400445
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  2400410 actcatcgagacgaatccaacaacatcttacatgat 2400445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 4612223 - 4612188
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  4612223 actcatcgagacgaatccaacaacatcttacatgat 4612188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 32619078 - 32619043
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  32619078 actcatcgagacgaatccaacaacatcttacatgat 32619043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 36819821 - 36819856
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  36819821 actcatcgagacgaatccaacaacatcttacatgat 36819856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 36859344 - 36859309
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  36859344 actcatcgagacgaatccaacaacatcttacatgat 36859309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 36905651 - 36905686
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  36905651 actcatcgagacgaatccaacaacatcttacatgat 36905686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 37951081 - 37951046
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  37951081 actcatcgagacgaatccaacaacatcttacatgat 37951046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 42086774 - 42086739
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  42086774 actcatcgagacgaatccaacaacatcttacatgat 42086739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 44479857 - 44479822
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  44479857 actcatcgagacgaatccaacaacatcttacatgat 44479822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 47081105 - 47081140
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  47081105 actcatcgagacgaatccaacaacatcttacatgat 47081140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 471 - 521
Target Start/End: Original strand, 38198506 - 38198556
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatat 521  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||| ||||    
T  38198506 acctagttgactctgatacacatatcaatgcatattttttatctttaatat 38198556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 534
Target Start/End: Complemental strand, 39982341 - 39982287
Alignment:
Q  480 actctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||| ||||||||  ||||||||||||| |||||| |||||||||||||||||    
T  39982341 actctgtcacacataataatgcatatgttttatctttaatatcttcaattctcta 39982287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 18795274 - 18795241
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  18795274 tcatcgagacgaatccaacaacatcttacatgat 18795241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 31466492 - 31466459
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  31466492 tcatcgagacgaatccaacaacatcttacatgat 31466459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 445 - 534
Target Start/End: Original strand, 40348409 - 40348498
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||| |||||||||  | || ||||| |||||||||| ||||| ||||||||||||||| ||| |||||| |||| || |||| ||||    
T  40348409 atactccctccgtcccatattagataacgtagttgactcagacactcatatcaatgcatattttttatctttaatatatttaattatcta 40348498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 42834426 - 42834393
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  42834426 tcatcgagacgaatccaacaacatcttacatgat 42834393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 44389420 - 44389387
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  44389420 tcatcgagacgaatccaacaacatcttacatgat 44389387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 46657760 - 46657793
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  46657760 tcatcgagacgaatccaacaacatcttacatgat 46657793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 47538050 - 47538083
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  47538050 tcatcgagacgaatccaacaacatcttacatgat 47538083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 48531449 - 48531482
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  48531449 tcatcgagacgaatccaacaacatcttacatgat 48531482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 531
Target Start/End: Complemental strand, 42493862 - 42493806
Alignment:
Q  475 agttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    ||||||||||| |||||||||||||| |||| ||| |||||| ||||||| ||||||    
T  42493862 agttgactctgtcacacatatcaatgtatattttttatctttaatatctttaattct 42493806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 574 - 606
Target Start/End: Complemental strand, 47713635 - 47713603
Alignment:
Q  574 catcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||||||||||    
T  47713635 catcgagacgaatccaacaacatcttacatgat 47713603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 19072894 - 19072929
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19072894 actcatcgagacgaatccagcaacatcttacatgat 19072929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 573 - 603
Target Start/End: Original strand, 2450812 - 2450842
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacat 603  Q
    |||||||||||||||||||||||||||||||    
T  2450812 tcatcgagacgaatccaacaacatcttacat 2450842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 14201504 - 14201537
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||||| |||||    
T  14201504 tcatcgagacgaatccaacaacatcttatatgat 14201537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 21392145 - 21392178
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||| ||||||||||||||||||    
T  21392145 tcatcgagacgaatctaacaacatcttacatgat 21392178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 23474103 - 23474070
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||| |||||||||||||||||||||||||||    
T  23474103 tcatcgtgacgaatccaacaacatcttacatgat 23474070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 31497838 - 31497805
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||| |||||||||||||||||||||||    
T  31497838 tcatcgagaccaatccaacaacatcttacatgat 31497805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 35500881 - 35500848
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||| |||||||||||||||||||||    
T  35500881 tcatcgagacgattccaacaacatcttacatgat 35500848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 37231697 - 37231664
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||| |||||||||||||||||||||    
T  37231697 tcatcgagacgattccaacaacatcttacatgat 37231664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 1e-33; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 25531778 - 25531867
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  25531778 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 25531867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 48219903 - 48219814
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  48219903 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 48219814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 443 - 535
Target Start/End: Original strand, 50539257 - 50539349
Alignment:
Q  443 aaatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||| |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  50539257 aaatactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 50539349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 444 - 535
Target Start/End: Complemental strand, 39354527 - 39354436
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| || ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  39354527 aatactccctacgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 39354436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 48265072 - 48264983
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  48265072 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctctac 48264983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 52378989 - 52379078
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  52378989 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 52379078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 446 - 534
Target Start/End: Complemental strand, 32988610 - 32988522
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  32988610 tactccctccgtctctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 32988522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 50876364 - 50876453
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  50876364 tactccctccgtccctaaataaatgacctagttgactctaacacatataccaatgcatatgttttatctttgatatcttcaattctctac 50876453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 452 - 535
Target Start/End: Original strand, 38458735 - 38458818
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||| ||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  38458735 ctccgtccctcaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 38458818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 49805512 - 49805428
Alignment:
Q  447 actctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    |||| |||||||||||||||||| | |||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  49805512 actccctccgtccctaaataaatgatctagttgactctgacaaacataccaatgcatatgttttatctttgatatcttcaattct 49805428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 443 - 535
Target Start/End: Original strand, 3529173 - 3529265
Alignment:
Q  443 aaatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||| |||||||||| ||| ||| | ||||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||||    
T  3529173 aaatactccctccgtcccttaattaatgatctagttgactctgacacacgtaccaatgcatatgttttatctttgatatattcaattctctac 3529265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 444 - 535
Target Start/End: Complemental strand, 23569937 - 23569846
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||||||| ||||||| | ||||||||||  ||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  23569937 aatactccctccgtccctcaataaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 23569846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 444 - 535
Target Start/End: Complemental strand, 30529313 - 30529222
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||||||  || |||||||||||||| ||||| ||||||||||||| |||||    
T  30529313 aatactccctccgtccctcaataaatgacctagttgactctgacacaagtaccaatgcatatgttttatcttagatatcttcaattttctac 30529222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 32565745 - 32565835
Alignment:
Q  445 atactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||||||| | |||| || || |||||||||||||||||| || ||||||||||||||  ||||||||||||||||||||||||    
T  32565745 atactccctccgtccttcaatagatgacttagttgactctgacacacgtaccaatgcatatgttttctctttgatatcttcaattctctac 32565835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 461 - 535
Target Start/End: Original strand, 42708519 - 42708593
Alignment:
Q  461 taaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||| |  ||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||    
T  42708519 taaataaatgatttagttgactctgacacacataccaatgcatatgttttatatttgatatcttcaattctctac 42708593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 452 - 531
Target Start/End: Complemental strand, 45235100 - 45235021
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    ||||||| || ||||| | || |||||||||||||||||| || |||||||||||||| |||||||||||||||||||||    
T  45235100 ctccgtctctgaataagtgacttagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattct 45235021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 457 - 535
Target Start/End: Original strand, 29161853 - 29161931
Alignment:
Q  457 tccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| ||||||| | ||||||||||||||||||| || |||| ||||||||| ||||||||||||||||||| |||||    
T  29161853 tccctcaataaatgatctagttgactctgacacacgtaccaattcatatgttttatctttgatatcttcaattttctac 29161931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 465 - 531
Target Start/End: Original strand, 47222233 - 47222299
Alignment:
Q  465 taaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    ||||| ||||||||||||| ||||||| || |||||||||||||| |||||||||||||||||||||    
T  47222233 taaatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattct 47222299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 456 - 535
Target Start/End: Original strand, 37281102 - 37281181
Alignment:
Q  456 gtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||| |||| || |||||||||||||||||| |||||  ||||||| ||||| |||||| ||||||||||||||||||    
T  37281102 gtccctcaatagatgacctagttgactctgacaaacatacaaatgcatgtgttttatcttttatatcttcaattctctac 37281181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 531
Target Start/End: Original strand, 1849726 - 1849784
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    |||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||    
T  1849726 ctagttgactctaacacatataccaatgcatatgttttatctttgatatcttcaattct 1849784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 452 - 534
Target Start/End: Original strand, 16266168 - 16266250
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||||||  | ||||| | ||||||||||  ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  16266168 ctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 16266250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 471 - 533
Target Start/End: Complemental strand, 16751689 - 16751627
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctct 533  Q
    ||||||||||||| ||||||| || |||||||||||||| |||||||||||||| ||||||||    
T  16751689 acctagttgactccgacacacgtaccaatgcatatgttttatctttgatatctttaattctct 16751627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 444 - 534
Target Start/End: Original strand, 50481276 - 50481366
Alignment:
Q  444 aatactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||| |||||||||  | || || || ||||||| || ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  50481276 aatactccctccgtcccatattagatgacttagttgattccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 50481366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 473 - 534
Target Start/End: Original strand, 16265060 - 16265121
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||  ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  16265060 ctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 16265121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 473 - 534
Target Start/End: Original strand, 26441664 - 26441725
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||  ||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  26441664 ctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 26441725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 471 - 532
Target Start/End: Complemental strand, 38738214 - 38738153
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctc 532  Q
    ||||||||||||| ||||||| || |||||||||||||| ||||||||||| ||||||||||    
T  38738214 acctagttgactccgacacacgtaccaatgcatatgttttatctttgatatgttcaattctc 38738153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 471 - 532
Target Start/End: Original strand, 48376183 - 48376244
Alignment:
Q  471 acctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctc 532  Q
    |||||||| ||| |||||||| || |||||||||||||| ||||||||||||||||||||||    
T  48376183 acctagttaactttgacacacgtaccaatgcatatgttttatctttgatatcttcaattctc 48376244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 43680069 - 43680157
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| |||||||||  | ||||| | ||||||||||  ||||| | || |||||||||||||| ||||||||||||||||||||||||    
T  43680069 tactccctccgtcccatattaaatgatctagttgacttcgacacgcgtaccaatgcatatgttttatctttgatatcttcaattctcta 43680157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 531
Target Start/End: Original strand, 4605004 - 4605083
Alignment:
Q  452 ctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    ||||||||||  ||| || | ||||||||||| ||||||| || |||||||||||||| |||||||||||||| ||||||    
T  4605004 ctccgtccctcgatagatgatctagttgactccgacacacgtaccaatgcatatgttttatctttgatatctttaattct 4605083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 475 - 529
Target Start/End: Original strand, 14075764 - 14075818
Alignment:
Q  475 agttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaatt 529  Q
    ||||||||| |||||||||| |||||||||||||| || ||||||||||||||||    
T  14075764 agttgactccgacacacataccaatgcatatgttttatatttgatatcttcaatt 14075818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 473 - 535
Target Start/End: Complemental strand, 31971621 - 31971559
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||||||||||||||||  || |||||||||||||| ||||||||||| ||||| |||||||    
T  31971621 ctagttgactctgacacatgtaccaatgcatatgttttatctttgatatattcaactctctac 31971559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 534
Target Start/End: Original strand, 24982378 - 24982439
Alignment:
Q  473 ctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||  ||||||| || |||||||||||||| || |||||||||||||||||||||    
T  24982378 ctagttgacttcgacacacgtaccaatgcatatgttttatatttgatatcttcaattctcta 24982439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 534
Target Start/End: Complemental strand, 3898832 - 3898744
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||| |||||||||  | ||||| | ||||||||||  |||| || || |||||||||||||| ||||||||||||||||||| ||||    
T  3898832 tactccctccgtcccatattaaatgatctagttgacttcgacagacgtaccaatgcatatgttttatctttgatatcttcaattttcta 3898744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 534
Target Start/End: Complemental strand, 31698821 - 31698761
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    |||||||||||||||||||||||||||||||| ||| |||||| |||| || |||| ||||    
T  31698821 tagttgactctgacacacatatcaatgcatatatttaatctttaatatatttaattatcta 31698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 1849825 - 1849860
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  1849825 actcatcgagacgaatccaacaacatcttacatgat 1849860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 32988485 - 32988450
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  32988485 actcatcgagacgaatccaacaacatcttacatgat 32988450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 39354400 - 39354365
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  39354400 actcatcgagacgaatccaacaacatcttacatgat 39354365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 42708625 - 42708660
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  42708625 actcatcgagacgaatccaacaacatcttacatgat 42708660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 49805388 - 49805353
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  49805388 actcatcgagacgaatccaacaacatcttacatgat 49805353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 50539385 - 50539420
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  50539385 actcatcgagacgaatccaacaacatcttacatgat 50539420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 50876489 - 50876524
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  50876489 actcatcgagacgaatccaacaacatcttacatgat 50876524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 493 - 534
Target Start/End: Original strand, 23330499 - 23330540
Alignment:
Q  493 tatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  23330499 tatcaatgcatatgttttatctttcatatcttcaattctcta 23330540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 25531905 - 25531938
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  25531905 tcatcgagacgaatccaacaacatcttacatgat 25531938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 30529184 - 30529151
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  30529184 tcatcgagacgaatccaacaacatcttacatgat 30529151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 37281219 - 37281252
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  37281219 tcatcgagacgaatccaacaacatcttacatgat 37281252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 38738112 - 38738079
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  38738112 tcatcgagacgaatccaacaacatcttacatgat 38738079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 41501741 - 41501708
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  41501741 tcatcgagacgaatccaacaacatcttacatgat 41501708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 535
Target Start/End: Complemental strand, 41501828 - 41501780
Alignment:
Q  487 cacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| || |||||||||||||| ||||||||||| |||||||||||||    
T  41501828 cacacgtaccaatgcatatgttttatctttgatatattcaattctctac 41501780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 575 - 606
Target Start/End: Original strand, 3529305 - 3529336
Alignment:
Q  575 atcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||    
T  3529305 atcgagacgaatccaacaacatcttacatgat 3529336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 534
Target Start/End: Complemental strand, 27990945 - 27990887
Alignment:
Q  475 agttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctcta 534  Q
    ||||||| ||| |||||||| ||||| |||| |||||||||| |||||||||||||||||    
T  27990945 agttgacgctgtcacacataccaatgtatat-tttcatctttaatatcttcaattctcta 27990887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 38458855 - 38458890
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||| ||||||||||    
T  38458855 actcatcgagacgaatccaacaacaccttacatgat 38458890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 48219778 - 48219743
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||| |||||||||||||||||||||||    
T  48219778 actcatcgagactaatccaacaacatcttacatgat 48219743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 48264947 - 48264912
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||| ||||||||||||||||||||||||||||    
T  48264947 actcatcaagacgaatccaacaacatcttacatgat 48264912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 575 - 606
Target Start/End: Original strand, 52379118 - 52379149
Alignment:
Q  575 atcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||    
T  52379118 atcgagacgaatccaacaacatcttacatgat 52379149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 531
Target Start/End: Complemental strand, 38737608 - 38737554
Alignment:
Q  477 ttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    |||||||||||||| |||||||||||||| ||| || ||| ||||||| ||||||    
T  38737608 ttgactctgacacatatatcaatgcatattttttatatttaatatctttaattct 38737554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 16265160 - 16265193
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||| |||||||||||||||||||||    
T  16265160 tcatcgagacgattccaacaacatcttacatgat 16265193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 23569808 - 23569775
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||| ||||||||||||||||||||||||||||    
T  23569808 tcatcaagacgaatccaacaacatcttacatgat 23569775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 24982478 - 24982511
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||| |||||||||||||||||||||    
T  24982478 tcatcgagacgattccaacaacatcttacatgat 24982511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 29161970 - 29162003
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||| ||||||||||||||||||||||||||    
T  29161970 tcatcgaaacgaatccaacaacatcttacatgat 29162003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 31971521 - 31971488
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||||||||||||| |||||    
T  31971521 tcatcgagacgaatccaacaacatcttatatgat 31971488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 32565873 - 32565906
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||||| |||||||||||||||    
T  32565873 tcatcgagacgaatccaaaaacatcttacatgat 32565906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 44369 - 44280
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||    
T  44369 tactccctccgtccctaaataaatgacctagttgactctgacacgcataccaatgcatatgttttatctttgatatcttcaattctctac 44280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 44244 - 44209
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  44244 actcatcgagacgaatccaacaacatcttacatgat 44209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 41478 - 41389
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  41478 tactccctccgtccctcaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctac 41389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 41353 - 41318
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||| ||||||||||||||||||||||||||||    
T  41353 actcatcaagacgaatccaacaacatcttacatgat 41318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 66; Significance: 7e-29; HSPs: 2)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 12752 - 12841
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  12752 tactccctccgtccctaaataagtgacctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctctac 12841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 12877 - 12912
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  12877 actcatcgagacgaatccaacaacatcttacatgat 12912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 66; Significance: 7e-29; HSPs: 4)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 10393 - 10482
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  10393 tactccctccgtccctaaataagtgacctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctctac 10482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 14059 - 14148
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| |||||||||||||||| | |||||||||||||||| |||| || |||||||||||||| |||||||||||||||||||||||||    
T  14059 tactccctccgtccctaaataagtgacctagttgactctgatacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 14148  T

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Target: scaffold0366; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 10518 - 10553
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  10518 actcatcgagacgaatccaacaacatcttacatgat 10553  T

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Target: scaffold0366; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 14184 - 14219
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||||    
T  14184 actcatcgagacgaatccaacaacatcttacatgat 14219  T

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Target: scaffold0027 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 446 - 529
Target Start/End: Original strand, 117321 - 117404
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaatt 529  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  117321 tactccctccgtccctaaataaatgatctagttgactctgacacacatatcaatgcatatgttttatctttaatatcttcaatt 117404  T

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Target: scaffold0027; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Original strand, 117446 - 117481
Alignment:
Q  571 actcatcgagacgaatccaacaacatcttacatgat 606  Q
    |||||||||||||||| |||||||||||||||||||    
T  117446 actcatcgagacgaattcaacaacatcttacatgat 117481  T

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Target: scaffold0340 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 14345 - 14430
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattct 531  Q
    ||||| ||| |||||| ||||||||| |||||||| || |||| || ||  ||| ||||||||| |||||||||||||||||||||    
T  14345 tactccctcggtccctcaataaataatctagttgattccgacatacttactaatacatatgttttatctttgatatcttcaattct 14430  T

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Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 446 - 535
Target Start/End: Complemental strand, 15477 - 15388
Alignment:
Q  446 tactctctccgtccctaaataaataacctagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    ||||| ||| |||||| ||||| | |||||||||||||| |||||| || ||||||||||| || |   |||||||||||||||||||||    
T  15477 tactccctcggtccctgaataactgacctagttgactctaacacacgtaccaatgcatatgatttactgttgatatcttcaattctctac 15388  T

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Target: scaffold0007; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 15350 - 15317
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||||||||||||||||||||||||||    
T  15350 tcatcgagacgaatccaacaacatcttacatgat 15317  T

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Target: scaffold0111 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 38593 - 38532
Alignment:
Q  474 tagttgactctgacacacatatcaatgcatatgtttcatctttgatatcttcaattctctac 535  Q
    |||||||||  |||| || || |||||||||||||| ||||||||||||||||||| |||||    
T  38593 tagttgacttcgacatacgtaccaatgcatatgttttatctttgatatcttcaattatctac 38532  T

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Target: scaffold0604 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 1241 - 1274
Alignment:
Q  573 tcatcgagacgaatccaacaacatcttacatgat 606  Q
    ||||||||||| ||||||||||||||||||||||    
T  1241 tcatcgagacgcatccaacaacatcttacatgat 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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