View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13206_low_12 (Length: 370)
Name: NF13206_low_12
Description: NF13206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13206_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 17 - 355
Target Start/End: Complemental strand, 33676634 - 33676292
Alignment:
| Q |
17 |
atcaagtatcaagataccccgagttta--atgatataatgat--nnnnnnnnnntgatataatgatcatcaacattttaacacattaacatctactagct |
112 |
Q |
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| T |
33676634 |
atcaagtatcaagataccccgagtttaatatgatataatgataaaaaaaaaaaattatataatgatcatcaacattttaacacattaacatctactagct |
33676535 |
T |
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| Q |
113 |
actaggtgaatttcttggtcatcacttcatttttacaagttccatatattgccagttatatttaactgatcatttaatttcagtcaaaatgtaactaaca |
212 |
Q |
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| T |
33676534 |
actaggtgcatttcttggtcatcacttcatatctacaagttccatatattgccagttatatttaactgatcatttaatttcagtcaaattgtaactaaca |
33676435 |
T |
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| Q |
213 |
taaaaccaatcaaaaatagatatgaaataagaactttcttacatcttggataaccctatctgttgcacggatctggattaaatcagatttgttgtttaac |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33676434 |
taaaaccaatcaaaaatagatatgaaataagaactttcttacatcttggataaccctatctgttgcacggatctggattaaatcagatttgttgtttaac |
33676335 |
T |
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| Q |
313 |
atgacagacttggatggggggaagtactgcttaaattgatcat |
355 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33676334 |
atgacagacttggatggggggaagtactgcttaaattgatcat |
33676292 |
T |
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