View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13207_high_1 (Length: 494)

Name: NF13207_high_1
Description: NF13207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13207_high_1
NF13207_high_1
[»] chr4 (53 HSPs)
chr4 (60-494)||(27417525-27417959)
chr4 (260-494)||(41638926-41639159)
chr4 (363-494)||(26363728-26363859)
chr4 (363-494)||(9927817-9927948)
chr4 (367-494)||(36314811-36314938)
chr4 (367-494)||(36329020-36329147)
chr4 (370-494)||(34570770-34570894)
chr4 (363-494)||(6655419-6655550)
chr4 (304-494)||(50674420-50674609)
chr4 (367-494)||(5268780-5268908)
chr4 (367-494)||(25861613-25861741)
chr4 (363-494)||(40630447-40630578)
chr4 (369-494)||(6742998-6743123)
chr4 (363-479)||(54882503-54882619)
chr4 (369-494)||(8689079-8689204)
chr4 (368-494)||(37740312-37740438)
chr4 (368-479)||(46570115-46570226)
chr4 (367-494)||(54867568-54867695)
chr4 (369-494)||(5429367-5429492)
chr4 (363-479)||(12745787-12745904)
chr4 (123-260)||(27564729-27564866)
chr4 (363-477)||(52095733-52095848)
chr4 (369-493)||(3909784-3909907)
chr4 (367-481)||(3777950-3778065)
chr4 (363-442)||(35661902-35661981)
chr4 (362-494)||(16622868-16623001)
chr4 (363-481)||(36994241-36994359)
chr4 (367-479)||(5396271-5396384)
chr4 (368-494)||(5143650-5143776)
chr4 (368-480)||(5148080-5148193)
chr4 (367-494)||(16628452-16628580)
chr4 (393-485)||(52083022-52083115)
chr4 (393-485)||(52094029-52094122)
chr4 (382-494)||(50263272-50263383)
chr4 (368-442)||(2209188-2209262)
chr4 (372-442)||(26176032-26176102)
chr4 (393-494)||(54200262-54200363)
chr4 (191-255)||(27568789-27568853)
chr4 (393-494)||(29254205-29254306)
chr4 (369-494)||(13992643-13992769)
chr4 (368-442)||(56179032-56179107)
chr4 (367-442)||(10047805-10047881)
chr4 (368-442)||(5370483-5370558)
chr4 (373-494)||(24968801-24968922)
chr4 (375-442)||(12739946-12740014)
chr4 (375-442)||(12748152-12748220)
chr4 (451-493)||(2209259-2209301)
chr4 (367-405)||(48142821-48142859)
chr4 (367-405)||(52083007-52083045)
chr4 (367-405)||(52094014-52094052)
chr4 (369-405)||(31495756-31495792)
chr4 (451-491)||(35661978-35662018)
chr4 (451-479)||(55085934-55085962)
[»] chr3 (54 HSPs)
chr3 (260-494)||(40912698-40912931)
chr3 (296-494)||(54593101-54593298)
chr3 (363-494)||(55302539-55302669)
chr3 (364-494)||(43404307-43404437)
chr3 (363-494)||(29812744-29812875)
chr3 (364-493)||(43402365-43402494)
chr3 (363-494)||(4569414-4569545)
chr3 (302-493)||(31340616-31340808)
chr3 (363-485)||(46173197-46173318)
chr3 (363-494)||(5236813-5236944)
chr3 (363-494)||(6096174-6096305)
chr3 (367-494)||(8127019-8127146)
chr3 (368-479)||(34490700-34490811)
chr3 (367-494)||(40592352-40592479)
chr3 (363-479)||(49200040-49200156)
chr3 (368-485)||(7764137-7764255)
chr3 (302-481)||(21711603-21711782)
chr3 (363-461)||(44331250-44331348)
chr3 (368-485)||(7761950-7762067)
chr3 (369-494)||(36029482-36029608)
chr3 (363-494)||(30709361-30709494)
chr3 (338-494)||(39032096-39032252)
chr3 (367-494)||(40734181-40734310)
chr3 (367-494)||(8370059-8370186)
chr3 (367-494)||(16264738-16264865)
chr3 (367-494)||(1735875-1736001)
chr3 (363-494)||(29810549-29810680)
chr3 (368-485)||(45094849-45094967)
chr3 (367-494)||(47923472-47923601)
chr3 (367-494)||(48438604-48438732)
chr3 (367-442)||(36018329-36018404)
chr3 (302-470)||(27038454-27038622)
chr3 (328-494)||(27027095-27027261)
chr3 (380-494)||(40845042-40845157)
chr3 (363-482)||(44331815-44331934)
chr3 (368-485)||(5258509-5258627)
chr3 (368-485)||(9636493-9636611)
chr3 (369-481)||(33386247-33386360)
chr3 (369-481)||(37726076-37726189)
chr3 (367-494)||(40735112-40735241)
chr3 (302-442)||(35925931-35926071)
chr3 (398-481)||(24694767-24694850)
chr3 (369-479)||(27986048-27986159)
chr3 (363-442)||(51398507-51398586)
chr3 (393-481)||(37408169-37408258)
chr3 (368-470)||(3393292-3393394)
chr3 (363-494)||(23410686-23410817)
chr3 (393-485)||(5260688-5260781)
chr3 (424-494)||(25929023-25929093)
chr3 (369-490)||(27453350-27453471)
chr3 (364-413)||(16498748-16498797)
chr3 (451-494)||(36018401-36018444)
chr3 (393-479)||(53921855-53921943)
chr3 (369-405)||(800795-800831)
[»] chr5 (38 HSPs)
chr5 (260-442)||(38746349-38746530)
chr5 (363-494)||(5057512-5057643)
chr5 (363-493)||(32636504-32636635)
chr5 (363-494)||(42426591-42426722)
chr5 (367-494)||(16650978-16651105)
chr5 (338-494)||(14520619-14520775)
chr5 (367-494)||(13487890-13488015)
chr5 (393-494)||(27015025-27015126)
chr5 (367-494)||(11916552-11916680)
chr5 (363-478)||(13239433-13239548)
chr5 (363-478)||(37438826-37438942)
chr5 (382-494)||(12083773-12083885)
chr5 (393-494)||(19806117-19806218)
chr5 (363-442)||(30683316-30683395)
chr5 (273-458)||(40146641-40146825)
chr5 (393-494)||(11181437-11181538)
chr5 (367-494)||(31004734-31004862)
chr5 (363-442)||(42428826-42428905)
chr5 (393-479)||(535614-535700)
chr5 (393-479)||(39468903-39468989)
chr5 (369-481)||(9352917-9353030)
chr5 (393-485)||(25412472-25412565)
chr5 (368-406)||(213030-213068)
chr5 (363-405)||(28751027-28751069)
chr5 (393-485)||(13342771-13342864)
chr5 (429-481)||(16649992-16650044)
chr5 (451-494)||(3075981-3076024)
chr5 (423-478)||(30182329-30182384)
chr5 (367-406)||(30683269-30683308)
chr5 (422-480)||(36931986-36932044)
chr5 (451-494)||(533538-533581)
chr5 (369-404)||(30631804-30631839)
chr5 (423-478)||(36074416-36074471)
chr5 (447-494)||(38746552-38746599)
chr5 (369-407)||(24136336-24136374)
chr5 (393-442)||(533492-533541)
chr5 (369-405)||(9789663-9789699)
chr5 (369-405)||(18442087-18442123)
[»] scaffold0014 (1 HSPs)
scaffold0014 (368-494)||(80857-80983)
[»] chr8 (32 HSPs)
chr8 (363-493)||(42435566-42435696)
chr8 (363-494)||(43036104-43036235)
chr8 (363-494)||(15212467-15212598)
chr8 (363-494)||(4743549-4743681)
chr8 (363-494)||(30143023-30143154)
chr8 (363-479)||(4733506-4733622)
chr8 (363-479)||(11383469-11383585)
chr8 (363-479)||(27810979-27811095)
chr8 (363-479)||(40221227-40221343)
chr8 (363-494)||(22975997-22976128)
chr8 (363-485)||(12703004-12703126)
chr8 (363-494)||(4731339-4731470)
chr8 (368-485)||(1746583-1746701)
chr8 (368-480)||(10014845-10014957)
chr8 (338-481)||(19175284-19175428)
chr8 (393-494)||(4283039-4283140)
chr8 (369-485)||(34254693-34254810)
chr8 (367-490)||(5702060-5702184)
chr8 (368-485)||(34256869-34256987)
chr8 (368-479)||(19945710-19945822)
chr8 (363-475)||(1345744-1345857)
chr8 (368-478)||(31217942-31218053)
chr8 (409-479)||(4696251-4696321)
chr8 (368-479)||(42497900-42498012)
chr8 (425-494)||(33351893-33351962)
chr8 (394-494)||(3051510-3051610)
chr8 (393-485)||(17982363-17982456)
chr8 (369-405)||(2627428-2627464)
chr8 (419-494)||(23799209-23799284)
chr8 (393-494)||(44303564-44303667)
chr8 (369-407)||(1261524-1261562)
chr8 (363-399)||(33351852-33351888)
[»] chr7 (42 HSPs)
chr7 (302-494)||(14070189-14070381)
chr7 (302-494)||(14380217-14380409)
chr7 (363-494)||(47676492-47676623)
chr7 (368-494)||(6360486-6360612)
chr7 (363-485)||(47674308-47674430)
chr7 (369-481)||(2647280-2647392)
chr7 (302-494)||(6570213-6570405)
chr7 (363-478)||(23554720-23554836)
chr7 (363-494)||(18126326-18126456)
chr7 (339-494)||(33332003-33332158)
chr7 (368-494)||(27347610-27347735)
chr7 (363-479)||(43863942-43864058)
chr7 (273-479)||(2389666-2389871)
chr7 (363-493)||(48489111-48489241)
chr7 (369-481)||(4538920-4539032)
chr7 (363-494)||(4585842-4585973)
chr7 (363-494)||(26416994-26417125)
chr7 (368-485)||(4178460-4178578)
chr7 (368-494)||(32358410-32358536)
chr7 (393-493)||(48491289-48491389)
chr7 (380-494)||(21983632-21983746)
chr7 (367-461)||(4796250-4796344)
chr7 (393-494)||(2761658-2761759)
chr7 (363-485)||(19495650-19495774)
chr7 (393-494)||(46515915-46516016)
chr7 (368-486)||(21989304-21989422)
chr7 (367-480)||(49092093-49092208)
chr7 (393-494)||(1113367-1113468)
chr7 (369-465)||(2479753-2479850)
chr7 (363-442)||(29608215-29608295)
chr7 (367-459)||(30026391-30026482)
chr7 (383-479)||(496365-496461)
chr7 (422-481)||(44847762-44847821)
chr7 (302-481)||(79791-79969)
chr7 (423-485)||(24515125-24515187)
chr7 (369-481)||(47264044-47264157)
chr7 (369-407)||(25767398-25767436)
chr7 (380-442)||(31733358-31733420)
chr7 (368-413)||(48599933-48599978)
chr7 (423-478)||(35853654-35853709)
chr7 (369-442)||(2361565-2361639)
chr7 (424-494)||(3050499-3050569)
[»] chr6 (33 HSPs)
chr6 (369-494)||(24435555-24435680)
chr6 (363-479)||(9183381-9183497)
chr6 (363-494)||(21272566-21272697)
chr6 (363-494)||(21593129-21593260)
chr6 (372-493)||(26661421-26661542)
chr6 (372-493)||(26767392-26767513)
chr6 (338-494)||(31979906-31980062)
chr6 (364-475)||(603612-603723)
chr6 (363-494)||(22964087-22964218)
chr6 (363-494)||(23824175-23824306)
chr6 (368-491)||(3809286-3809406)
chr6 (367-479)||(5571845-5571957)
chr6 (367-494)||(18234472-18234600)
chr6 (367-481)||(31086052-31086168)
chr6 (368-494)||(10076773-10076899)
chr6 (367-480)||(5017075-5017190)
chr6 (363-485)||(5411598-5411721)
chr6 (389-479)||(26954674-26954764)
chr6 (369-494)||(24714761-24714885)
chr6 (363-478)||(5407280-5407396)
chr6 (393-485)||(5413813-5413906)
chr6 (363-480)||(33211555-33211671)
chr6 (423-485)||(16452805-16452867)
chr6 (393-485)||(5406563-5406656)
chr6 (393-485)||(5410888-5410981)
chr6 (393-485)||(30834902-30834995)
chr6 (372-439)||(17759427-17759494)
chr6 (423-485)||(16452694-16452756)
chr6 (393-478)||(33160726-33160812)
chr6 (369-481)||(5757061-5757174)
chr6 (424-485)||(31405039-31405100)
chr6 (369-479)||(23896736-23896847)
chr6 (369-407)||(22709497-22709535)
[»] chr1 (39 HSPs)
chr1 (338-493)||(37070157-37070313)
chr1 (368-494)||(4553004-4553130)
chr1 (368-494)||(49918035-49918161)
chr1 (363-494)||(37033643-37033774)
chr1 (368-494)||(10924909-10925035)
chr1 (363-490)||(44454840-44454967)
chr1 (369-479)||(11348188-11348298)
chr1 (363-494)||(193075-193206)
chr1 (368-485)||(3206671-3206790)
chr1 (368-494)||(28220582-28220709)
chr1 (367-480)||(3282109-3282223)
chr1 (368-494)||(31658924-31659050)
chr1 (366-494)||(13598789-13598918)
chr1 (368-481)||(3189036-3189151)
chr1 (368-481)||(3197853-3197968)
chr1 (367-494)||(16455331-16455458)
chr1 (368-494)||(28223777-28223904)
chr1 (368-485)||(20762357-20762475)
chr1 (368-494)||(1833207-1833334)
chr1 (394-479)||(29135762-29135847)
chr1 (393-485)||(13547672-13547763)
chr1 (393-485)||(13549583-13549674)
chr1 (367-479)||(37879480-37879592)
chr1 (369-481)||(13604205-13604318)
chr1 (393-494)||(30476804-30476905)
chr1 (393-481)||(46064629-46064717)
chr1 (369-481)||(26644483-26644593)
chr1 (369-451)||(3156554-3156636)
chr1 (372-453)||(16124245-16124327)
chr1 (367-481)||(29652215-29652332)
chr1 (391-494)||(21536175-21536278)
chr1 (363-494)||(22819819-22819950)
chr1 (295-385)||(46064552-46064642)
chr1 (393-485)||(13316683-13316776)
chr1 (423-479)||(15820048-15820104)
chr1 (364-413)||(13659737-13659786)
chr1 (369-405)||(9986895-9986931)
chr1 (369-407)||(19361022-19361060)
chr1 (369-407)||(19365878-19365916)
[»] scaffold0286 (1 HSPs)
scaffold0286 (363-494)||(11021-11152)
[»] chr2 (32 HSPs)
chr2 (363-494)||(34389240-34389371)
chr2 (363-494)||(2837200-2837331)
chr2 (367-494)||(20522611-20522738)
chr2 (364-494)||(14698587-14698717)
chr2 (338-494)||(21630334-21630490)
chr2 (367-481)||(39483278-39483393)
chr2 (302-494)||(23077988-23078179)
chr2 (363-478)||(36988447-36988563)
chr2 (367-494)||(33528204-33528332)
chr2 (363-494)||(36318365-36318497)
chr2 (363-494)||(35447458-35447588)
chr2 (338-471)||(17865589-17865723)
chr2 (367-481)||(33118537-33118651)
chr2 (363-441)||(29867560-29867639)
chr2 (363-485)||(45099435-45099558)
chr2 (338-494)||(10706804-10706960)
chr2 (369-481)||(28258760-28258873)
chr2 (370-442)||(39284585-39284657)
chr2 (393-485)||(2334782-2334875)
chr2 (371-494)||(8389732-8389857)
chr2 (423-485)||(5723619-5723681)
chr2 (393-485)||(4503497-4503590)
chr2 (363-438)||(6595406-6595482)
chr2 (363-442)||(17863873-17863953)
chr2 (367-481)||(13569732-13569847)
chr2 (363-470)||(40015319-40015426)
chr2 (367-405)||(2334767-2334805)
chr2 (369-407)||(25410118-25410156)
chr2 (369-407)||(30833031-30833069)
chr2 (423-485)||(36206030-36206092)
chr2 (369-406)||(7450869-7450905)
chr2 (369-405)||(6266384-6266420)
[»] scaffold0066 (1 HSPs)
scaffold0066 (363-494)||(20771-20902)
[»] scaffold0006 (4 HSPs)
scaffold0006 (367-494)||(2882-3010)
scaffold0006 (366-494)||(6074-6203)
scaffold0006 (369-481)||(132862-132975)
scaffold0006 (364-413)||(149498-149547)
[»] scaffold0176 (1 HSPs)
scaffold0176 (363-479)||(17635-17751)
[»] scaffold0087 (2 HSPs)
scaffold0087 (369-481)||(36415-36528)
scaffold0087 (369-481)||(43544-43657)
[»] scaffold0466 (1 HSPs)
scaffold0466 (393-480)||(6820-6907)
[»] scaffold0002 (1 HSPs)
scaffold0002 (368-485)||(434217-434336)
[»] scaffold0016 (1 HSPs)
scaffold0016 (368-478)||(114272-114382)
[»] scaffold0098 (1 HSPs)
scaffold0098 (369-481)||(45600-45713)
[»] scaffold0140 (1 HSPs)
scaffold0140 (393-480)||(8024-8112)
[»] scaffold0510 (1 HSPs)
scaffold0510 (369-475)||(1193-1300)
[»] scaffold0036 (1 HSPs)
scaffold0036 (377-406)||(86066-86095)


Alignment Details
Target: chr4 (Bit Score: 399; Significance: 0; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 60 - 494
Target Start/End: Complemental strand, 27417959 - 27417525
Alignment:
Q  60 atttacatttactagattcaaggaggacaggttataaacctgagaattaagtgaatgggcctaaccaactaccaaggcatgtggttgtttataggaaatt 159  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27417959 atttacatttactagattcaaggaggacaggttacaaacctgagaattaagtgaatgggcctaaccaactaccaaggcatgtggttgtttataggaaatt 27417860  T
Q  160 cccagcttacaacaatttcttaccagtttgcaatttaattatatgttgcatggtagtgcttgtgcagttggaaaaagtggggtattgatgaagactatac 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27417859 cccagcttacaacaatttcttaccagtttgcaatttaattatatgttgcatggtagtgcttgtgcagttggaaaaagtgcggtattgatgaagactatac 27417760  T
Q  260 tgttgcaaagtgcctcaaaaatgatttttagcaaaattcaggatcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttcctt 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  27417759 tgttgcaaagtgcctcaaaaatgatttttagcaaaattcaggatcgtgacatgatttgtgtaccgtgtcacgatttggcaggtagtgagcatggttcctt 27417660  T
Q  360 gatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacg 459  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  27417659 gatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcaacttgttcggcacggtttcaggataaggttggtcgtaccttgggtcgtacg 27417560  T
Q  460 catcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||||||||||||||||||||||||    
T  27417559 catcaaccgtgtcacgatttgggaaatcgtgacac 27417525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 260 - 494
Target Start/End: Original strand, 41638926 - 41639159
Alignment:
Q  260 tgttgcaaagtgcctcaaaaatgatttttagcaaaattcaggatcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttcctt 359  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  41638926 tgttgcaaagtgcctcaaaaatgatttt-agcaaaattcaggatcgtgacacgatttgtggaccgtgtcacgatttggcaggcagtgaacatggttcctt 41639024  T
Q  360 gatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacg 459  Q
     | ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| || |||||||||||||    
T  41639025 aaagtgttcaatcgtgacacgattttggaaaaacgtgacacgattttcaacttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacg 41639124  T
Q  460 catcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||| |||||||||||||||||| | ||||||    
T  41639125 catcaactgtgtcacgatttgggaaaccatgacac 41639159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 26363728 - 26363859
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||| |  ||| |||||||||||||||||||||||| |||||||||||||||     
T  26363728 gtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggttggtcataccttgggtcgtacgcac 26363827  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| |||||||| |||||||||||||||||||    
T  26363828 caaacgtgtcacaatttgggaaatcgtgacac 26363859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 9927948 - 9927817
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||| | | || ||||||||||||||||||||| |  |||||||||||||||     
T  9927948 gtgttcaatcgtgacacgattttgggaaaatgtgacacgattttcggcttgctggacaagttttcaggataaggttggtcgttccttgggtcgtacgcac 9927849  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| ||||||||||||||||||| ||||||||    
T  9927848 caaacgtgtcacgatttgggaaaacgtgacac 9927817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 36314811 - 36314938
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||| || ||||||||||||||| |||     
T  36314811 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaat 36314910  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||||  || ||||||||    
T  36314911 cgtgtcacgatttggacaaacgtgacac 36314938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 36329020 - 36329147
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||| || ||||||||||||||| |||     
T  36329020 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaat 36329119  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||||  || ||||||||    
T  36329120 cgtgtcacgatttggacaaacgtgacac 36329147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 370 - 494
Target Start/End: Complemental strand, 34570894 - 34570770
Alignment:
Q  370 atcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgt 469  Q
    ||||||||||||||||||||||||||||||||||||||| |||| | | || ||||||||||||||||||||  || ||||||||||||||| ||| |||    
T  34570894 atcgtgacacgattttgggaaaacgtgacacgattttcggcttgctggacaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgt 34570795  T
Q  470 gtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||||| ||||||||    
T  34570794 gtcacgatttgggaaaacgtgacac 34570770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 6655419 - 6655550
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||  ||| | |||| ||||||||||||||||||||| ||  ||||||||||||||     
T  6655419 gtgtccaatcgtgacacgattttggggaaatgtgacacgattttcggtttgctgggcaagttttcaggataaggttggtcgtacattgggtcgtacgcac 6655518  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| ||||||||||||||||||||||||||||    
T  6655519 caaacgtgtcacgatttgggaaatcgtgacac 6655550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 304 - 494
Target Start/End: Complemental strand, 50674609 - 50674420
Alignment:
Q  304 cgtgacacgatttgtgtaccgtgccacgattt-ggcaggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacga 402  Q
    |||||||||||||| ||| |||| |||||||| |||| || ||||||||| ||  | || |||| ||||||||  |||||||||||||||||||||| ||    
T  50674609 cgtgacacgatttgggtaacgtgtcacgattttggcatgccgtgagcatgttttgt-ga-gtgtccaatcgtgttacgattttgggaaaacgtgacatga 50674512  T
Q  403 ttttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||  |||| | |||||||||||||||||||||||||  || ||||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  50674511 ttttcagcttgctgggcacgttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcatgacac 50674420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 5268780 - 5268908
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||||| || ||||||||||||||||||||||| || ||||||||||||||| |||    
T  5268780 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaa 5268879  T
Q  466 ccgtgtcacgatttgggaaatcgtgacac 494  Q
     |||||||||||||||  || ||||||||    
T  5268880 tcgtgtcacgatttggacaaacgtgacac 5268908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 25861613 - 25861741
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaa-cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||||| |||||||||||||||| ||||||||||||||| ||||| | |||| ||||||||||||||||||||| || |||||||||||||||||||    
T  25861613 tcaatcgtgtcacgattttgggaaaaacgtgacacgattttcaacttgctgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcatcaa 25861712  T
Q  466 ccgtgtcacgatttgggaaatcgtgacac 494  Q
     |||||||||||||||  || ||||||||    
T  25861713 tcgtgtcacgatttggacaaacgtgacac 25861741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 40630447 - 40630578
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||| |||||||||||||||||||||||||||||||  |||| | ||||| ||||||| |||||||||||| || |||||||| || |||     
T  40630447 gtgtccaatcgtgtcacgattttgggaaaacgtgacacgattttcagcttgctaggcacattttcagaataaggttggtcgtaccttgggtcatatgcac 40630546  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| ||||||||||||||||||||||||||||    
T  40630547 caaacgtgtcacgatttgggaaatcgtgacac 40630578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 369 - 494
Target Start/End: Original strand, 6742998 - 6743123
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccg 468  Q
    ||||||| |||| |||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||| || |||||| ||||||||  || ||    
T  6742998 aatcgtggcacgtttttgggaaaacgtgacacgattttaaacttgttgggcacgttttcaggataaggttggtcgtaccttgggacgtacgcactaatcg 6743097  T
Q  469 tgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||||||| | ||||||    
T  6743098 tgtcacgatttgggaaaacttgacac 6743123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 363 - 479
Target Start/End: Original strand, 54882503 - 54882619
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||| || || |||||||||||||||     
T  54882503 gtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgttggacacgttttcaggataaggttgatcgtaccttgggtcgtacgcac 54882602  T
Q  463 caaccgtgtcacgattt 479  Q
    |||| ||| ||| ||||    
T  54882603 caactgtgacacaattt 54882619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 369 - 494
Target Start/End: Original strand, 8689079 - 8689204
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| | || ||||||||||||||||||||||| || ||||||||||||||| ||| |    
T  8689079 aatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 8689178  T
Q  468 gtgtcacgatttgggaaatcgtgacac 494  Q
    ||| |||||||| ||||| ||||||||    
T  8689179 gtgccacgattt-ggaaaacgtgacac 8689204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 368 - 494
Target Start/End: Original strand, 37740312 - 37740438
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||| |||||||||||||||||||||||| |||||||| ||||   |||| ||||||||||||||||||||| || |||||||||||| || |||      
T  37740312 caatcgtaacacgattttgggaaaacgtgacatgattttcggcttgcagggcaagttttcaggataaggttggtcgtaccttgggtcgtacacaccaaat 37740411  T
Q  468 gtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||||||| ||||||||    
T  37740412 gtgtcacgatttgggaaaacgtgacac 37740438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 368 - 479
Target Start/End: Complemental strand, 46570226 - 46570115
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||| | ||||  |||||||||||||||||||| ||  |||||||||||||||||| |    
T  46570226 caatcgtgacaagattttgggaaaacgtgacacaattttcggcttgctgggcaaattttcaggataaggttggtcgtactttgggtcgtacgcatcaaac 46570127  T
Q  468 gtgtcacgattt 479  Q
    ||||||||||||    
T  46570126 gtgtcacgattt 46570115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 367 - 494
Target Start/End: Complemental strand, 54867695 - 54867568
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||| | ||||||||||  |||||||||||||| || ||||| ||||||||| |||     
T  54867695 tcaatcgtgtcacaattttgggaaaacgtgacacgattttcaacttgctgggcacgtttttcggataaggttggtcgtaccttggatcgtacgcaccaat 54867596  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||||  || ||||||||    
T  54867595 cgtgtcacgatttggacaaacgtgacac 54867568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 369 - 494
Target Start/End: Original strand, 5429367 - 5429492
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccg 468  Q
    ||||||||||||||||||||||||||||| |||||||||  |||||| | || ||||||||| |||| |||||| || ||||||||||||||| ||| ||    
T  5429367 aatcgtgacacgattttgggaaaacgtgatacgattttcagcttgttggacaagttttcaggttaagattggtcgtaccttgggtcgtacgcaccaatcg 5429466  T
Q  469 tgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||| ||||||| | ||||||    
T  5429467 tgtcacgatgtgggaaaacatgacac 5429492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 363 - 479
Target Start/End: Complemental strand, 12745904 - 12745787
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgtttt-caggataaggttggtcatagcttgggtcgtacgca 461  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| |||| | |||| ||||| |||||||||||||||| || ||||||||||||||     
T  12745904 gtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttccaggataaggttggtcgtaccttgggtcgtacgcg 12745805  T
Q  462 tcaaccgtgtcacgattt 479  Q
     ||| |||||||||||||    
T  12745804 ccaatcgtgtcacgattt 12745787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 27564729 - 27564866
Alignment:
Q  123 accaactaccaaggcatgtggttgtttataggaaattcccagcttacaacaatttcttaccagtttgcaatttaattatatgttgcatggtagtgcttgt 222  Q
    ||||||| |||||||||||| ||  ||||||||||||   | ||||||||||| ||| | |||||||||||| |||||||||| |  |||||||  ||||    
T  27564729 accaactgccaaggcatgtgattacttataggaaatttgtaccttacaacaatgtctcatcagtttgcaattaaattatatgtcgtgtggtagtatttgt 27564828  T
Q  223 gcagttggaaaaagtggggtattgatgaagactatact 260  Q
    |||||||||||||||||||||||||||||||| |||||    
T  27564829 gcagttggaaaaagtggggtattgatgaagacaatact 27564866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 363 - 477
Target Start/End: Complemental strand, 52095848 - 52095733
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgca 461  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | |||| | |||| | |||||||||||||||||||| || ||||||||||| |||    
T  52095848 gtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtaagca 52095749  T
Q  462 tcaaccgtgtcacgat 477  Q
    |||| |||| ||||||    
T  52095748 tcaatcgtgacacgat 52095733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 369 - 493
Target Start/End: Original strand, 3909784 - 3909907
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccg 468  Q
    ||||||||||||||||| ||||||| |||||| ||||| | | |||| |||||||||| || |||||||||||| || |||| |||||||||||||||||    
T  3909784 aatcgtgacacgatttttggaaaacatgacactatttttggcatgtttggcacgttttaag-ataaggttggtcgtaccttgagtcgtacgcatcaaccg 3909882  T
Q  469 tgtcacgatttgggaaatcgtgaca 493  Q
    |||||||||||  |||| |||||||    
T  3909883 tgtcacgattttagaaaacgtgaca 3909907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 3778065 - 3777950
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttc-gacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||||| |||||||||||||||||||||||||||||||  | ||| |||| ||||||||| ||||||||||||| || ||||||||||||||| |||    
T  3778065 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaatttgctcggtacgttttcaagataaggttggtcgtaccttgggtcgtacgcaccaa 3777966  T
Q  466 ccgtgtcacgatttgg 481  Q
     |||| |||| |||||    
T  3777965 tcgtgccacgttttgg 3777950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 35661902 - 35661981
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtc 442  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||    
T  35661902 gtgtccaatcgtgacacgattttgggaaaatgtgtcacgattttcggcttgttgggcacgttttcaggataaggttggtc 35661981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 362 - 494
Target Start/End: Original strand, 16622868 - 16623001
Alignment:
Q  362 tgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgtttt-caggataaggttggtcatagcttgggtcgtacg 459  Q
    |||| ||||| ||| ||| ||||||||||||||||||||||||||| | |||| | || ||||||| |||||||||||||||| || |||||||||||||    
T  16622868 tgtgctcaattgtgtcacaattttgggaaaacgtgacacgattttcaaacttgctaggtacgtttttcaggataaggttggtcgtaccttgggtcgtacg 16622967  T
Q  460 catcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    || ||| ||||||||||||| ||||| ||||||||    
T  16622968 caccaatcgtgtcacgattt-ggaaaacgtgacac 16623001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 363 - 481
Target Start/End: Original strand, 36994241 - 36994359
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||||||| ||||| |||||||||| ||| ||||||| |||| | |||||||||||  |||||||||| || || ||| |||||||||||     
T  36994241 gtgtccaatcgtgacacaatttttggaaaacgtgtcacaattttcggcttgctaggcacgttttctagataaggttgatcgtaccttaggtcgtacgcac 36994340  T
Q  463 caaccgtgtcacgatttgg 481  Q
    |||||||||||||||||||    
T  36994341 caaccgtgtcacgatttgg 36994359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 367 - 479
Target Start/End: Original strand, 5396271 - 5396384
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||||| ||||||||||| ||||||||||||||||||| | |||||| || | |||||||||||||||||| || || ||||||||||||||| |||    
T  5396271 tcaatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgttgggtatgttttcaggataaggttgatcgtaccttgggtcgtacgcaccaa 5396370  T
Q  466 ccgtgtcacgattt 479  Q
     |||| ||||||||    
T  5396371 tcgtgccacgattt 5396384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 368 - 494
Target Start/End: Complemental strand, 5143776 - 5143650
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||||| |||||||||| ||||| |||||||||||||| | |||||| || |||||||||||||||||||||||  | ||||||| || |||| |||     
T  5143776 caatcgtggcacgattttgtgaaaatgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgcaccttgggttgtgcgcaccaat 5143677  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||| ||||| ||||||||    
T  5143676 cgtgtcacgattt-ggaaaacgtgacac 5143650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 480
Target Start/End: Complemental strand, 5148193 - 5148080
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||||| |||||||||| |||||| ||||||||||||| | |||  | |  ||||||||||||||||||||||| || ||||||||||||||| |||     
T  5148193 caatcgtggcacgattttgtgaaaacttgacacgattttcaaacttactggatacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaat 5148094  T
Q  467 cgtgtcacgatttg 480  Q
    ||||||||||||||    
T  5148093 cgtgtcacgatttg 5148080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 16628452 - 16628580
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgtttt-caggataaggttggtcatagcttgggtcgtacgcatca 464  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||| | |  || |||| || ||||||||||||| || ||||||||||||||| ||    
T  16628452 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgcttgttacttttttcatgataaggttggtcgtaccttgggtcgtacgcacca 16628551  T
Q  465 accgtgtcacgatttgggaaatcgtgacac 494  Q
    | ||||||||||||| ||||| ||||||||    
T  16628552 atcgtgtcacgattt-ggaaaacgtgacac 16628580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 52083115 - 52083022
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||| | |||||| |||| | ||||||||||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||    
T  52083115 cgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgatttgggaaa 52083022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 52094122 - 52094029
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||| | |||||| |||| | ||||||||||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||    
T  52094122 cgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgatttgggaaa 52094029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 494
Target Start/End: Complemental strand, 50263383 - 50263272
Alignment:
Q  382 ttttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgg 481  Q
    |||||||||||||| |||||||||||| |||| | || | |||||||| |||||||||||| || ||| ||||||||||| |||  |||||||| |||||    
T  50263383 ttttgggaaaacgtaacacgattttcggcttggtgggtaagttttcagaataaggttggtcgtacctt-ggtcgtacgcaccaaatgtgtcacggtttgg 50263285  T
Q  482 gaaatcgtgacac 494  Q
    |||||||||||||    
T  50263284 gaaatcgtgacac 50263272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 442
Target Start/End: Original strand, 2209188 - 2209262
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtc 442  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||| | |||| |||||||||||||||||||||    
T  2209188 caatcgtgacacgattttggggaaacgtgacacgattttcggtttgctaggcaagttttcaggataaggttggtc 2209262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 26176102 - 26176032
Alignment:
Q  372 cgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtc 442  Q
    |||||||| |||||||||||||||||||||||||||| |||| | |||| |||||||||||||||||||||    
T  26176102 cgtgacacaattttgggaaaacgtgacacgattttcggcttgatgggcaagttttcaggataaggttggtc 26176032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 494
Target Start/End: Complemental strand, 54200363 - 54200262
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgac 492  Q
    |||||||||||||||| |||| | |||| ||||||| ||||||||||||| || ||||||||||||||| ||| |  ||||||||||||||||  |||||    
T  54200363 cgtgacacgattttcggcttgctgggcaagttttcaagataaggttggtcgtaccttgggtcgtacgcaccaaactagtcacgatttgggaaaatgtgac 54200264  T
Q  493 ac 494  Q
    ||    
T  54200263 ac 54200262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 27568789 - 27568853
Alignment:
Q  191 aatttaattatatgttgcatggtagtgcttgtgcagttggaaaaagtggggtattgatgaagact 255  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||    
T  27568789 aattaaattatatgttgcatggtagtacttgtgcagttggaaatagtggggtcttgatgaagact 27568853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 494
Target Start/End: Original strand, 29254205 - 29254306
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgac 492  Q
    ||||||| |||||||| |||||| |||| || ||||| |||||||||||| ||  |||| ||||||||| ||| ||||||||||||||| ||| ||||||    
T  29254205 cgtgacatgattttcggcttgttgggcaagtattcagaataaggttggtcgtattttggatcgtacgcaccaaacgtgtcacgatttggaaaaacgtgac 29254304  T
Q  493 ac 494  Q
    ||    
T  29254305 ac 29254306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 369 - 494
Target Start/End: Complemental strand, 13992769 - 13992643
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttc-gacttgttcggcacgttttcaggataagg-ttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||| |||  | ||||||| |||||||  |||||||| |||| | |||||| |||||     
T  13992769 aatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagttttcatgataaggactggtcataccttgtgacgtacgtatcaat 13992670  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    |||| |||||| | ||||||||||||||    
T  13992669 cgtgacacgatct-ggaaatcgtgacac 13992643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 368 - 442
Target Start/End: Complemental strand, 56179107 - 56179032
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtc 442  Q
    |||||||||||||||||||||||||||||||| |||||| | |||| | |||| | ||||||||||||||||||||    
T  56179107 caatcgtgacacgattttgggaaaacgtgacatgatttttggcttgctgggcaagattttcaggataaggttggtc 56179032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 442
Target Start/End: Complemental strand, 10047881 - 10047805
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttc-gacttgttcggcacgttttcaggataaggttggtc 442  Q
    |||| |||| ||||||||||||||||||||||||||||| |  ||||| | || |||||||||||||||||||||||    
T  10047881 tcaaccgtgtcacgattttgggaaaacgtgacacgatttgcaaacttgatgggtacgttttcaggataaggttggtc 10047805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 442
Target Start/End: Complemental strand, 5370558 - 5370483
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtc 442  Q
    |||||||||||||||||||||||| |||||||||||||| | |||| | |||| |  |||||||||||||||||||    
T  5370558 caatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagactttcaggataaggttggtc 5370483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 494
Target Start/End: Original strand, 24968801 - 24968922
Alignment:
Q  373 gtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtc 472  Q
    |||||||||||||| | || ||||||||||| ||   | || | | |||||||||||||||||||||||| ||  ||||||||||||| |||| |||| |    
T  24968801 gtgacacgattttgtgcaatcgtgacacgatatttagcatgcttgacacgttttcaggataaggttggtcgtacattgggtcgtacgcttcaatcgtgac 24968900  T
Q  473 acgatttgggaaatcgtgacac 494  Q
    | ||||| |  |||||||||||    
T  24968901 atgattttgccaatcgtgacac 24968922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 442
Target Start/End: Complemental strand, 12740014 - 12739946
Alignment:
Q  375 gacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtc 442  Q
    ||||||||||||||||||||| |||| ||||| | |||| | |||| | ||||||||||||||||||||    
T  12740014 gacacgattttgggaaaacgtaacacaatttttggcttgctgggcaagtttttcaggataaggttggtc 12739946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 442
Target Start/End: Complemental strand, 12748220 - 12748152
Alignment:
Q  375 gacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtc 442  Q
    ||||||||||||||||||||| |||| ||||| | |||| | |||| | ||||||||||||||||||||    
T  12748220 gacacgattttgggaaaacgtaacacaatttttggcttgctgggcaagtttttcaggataaggttggtc 12748152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 451 - 493
Target Start/End: Original strand, 2209259 - 2209301
Alignment:
Q  451 ggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgaca 493  Q
    ||||||||||| ||| || ||||||||||||||||||||||||    
T  2209259 ggtcgtacgcaccaaacgcgtcacgatttgggaaatcgtgaca 2209301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 405
Target Start/End: Original strand, 48142821 - 48142859
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattt 405  Q
    |||||||||||||||||| || |||||||||||||||||    
T  48142821 tcaatcgtgacacgatttgggaaaaacgtgacacgattt 48142859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 405
Target Start/End: Complemental strand, 52083045 - 52083007
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattt 405  Q
    |||||||||||||||||| || |||||||||||||||||    
T  52083045 tcaatcgtgacacgatttgggaaaaacgtgacacgattt 52083007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 405
Target Start/End: Complemental strand, 52094052 - 52094014
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattt 405  Q
    |||||||||||||||||| || |||||||||||||||||    
T  52094052 tcaatcgtgacacgatttgggaaaaacgtgacacgattt 52094014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 405
Target Start/End: Complemental strand, 31495792 - 31495756
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattt 405  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  31495792 aatcgtgacacgattgtgggaaatcgtgacacgattt 31495756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 491
Target Start/End: Original strand, 35661978 - 35662018
Alignment:
Q  451 ggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtga 491  Q
    ||||||||||| ||||||||||||||||||| ||| |||||    
T  35661978 ggtcgtacgcaccaaccgtgtcacgatttggcaaaacgtga 35662018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 479
Target Start/End: Complemental strand, 55085962 - 55085934
Alignment:
Q  451 ggtcgtacgcatcaaccgtgtcacgattt 479  Q
    |||||||||||||||||||||||||||||    
T  55085962 ggtcgtacgcatcaaccgtgtcacgattt 55085934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 163; Significance: 7e-87; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 260 - 494
Target Start/End: Original strand, 40912698 - 40912931
Alignment:
Q  260 tgttgcaaagtgcctcaaaaatgatttttagcaaaattcaggatcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttcctt 359  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40912698 tgttgcaaagtgcctcaaaaatgatttt-agcaaaattcaggattgtgacacgatttgtgtaccgtgtcacgatttggcaggcagtgagcatggttcctt 40912796  T
Q  360 gatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacg 459  Q
    || |||||||||||||| || |||||||||||||||||||||||||||| |||||| |||| |||||| |||||||| ||||| || ||||| |||||||    
T  40912797 gaagtgttcaatcgtgatacaattttgggaaaacgtgacacgattttcggcttgttgggcaagttttctggataaggctggtcgtatcttggatcgtacg 40912896  T
Q  460 catcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    || ||| ||||||||||||||||||||| ||||||    
T  40912897 caccaaacgtgtcacgatttgggaaatcatgacac 40912931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 296 - 494
Target Start/End: Original strand, 54593101 - 54593298
Alignment:
Q  296 ttcaggatcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttccttgatg-tgttcaatcgtgacacgattttgggaaaacg 394  Q
    ||||| ||| ||| ||||||| || ||| || ||||||||   |||||||||||||||||  || ||| | |||||||||||| | ||||||||||||||    
T  54593101 ttcagaatcatgatacgatttatgaaccatggcacgattttctaggcagtgagcatggtt--ttcatggtattcaatcgtgactcaattttgggaaaacg 54593198  T
Q  395 tgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||| ||  |||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  54593199 tgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtacattgggtcgtacgcaccaaacgtgtcacgatttgggaaatcatgacac 54593298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 55302669 - 55302539
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||||||||||||||||||||| |||||||||||| |||||||||| |||| | |||| ||||||||||||||||||||| || |||||||||||||||     
T  55302669 gtgttcaatcgtgacacgattt-gggaaaacgtgatacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcac 55302571  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| ||||||||||||||||||||||||||||    
T  55302570 caaacgtgtcacgatttgggaaatcgtgacac 55302539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 364 - 494
Target Start/End: Complemental strand, 43404437 - 43404307
Alignment:
Q  364 tgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatc 463  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||| |  ||| |||||||||||||||| |||| || ||||||||||||||| |    
T  43404437 tgttcaatcgtgacacgattttggggaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggtcggtcgtaccttgggtcgtacgcacc 43404338  T
Q  464 aaccgtgtcacgatttgggaaatcgtgacac 494  Q
    || ||||||||||||||||||||||||||||    
T  43404337 aaacgtgtcacgatttgggaaatcgtgacac 43404307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 29812744 - 29812875
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | |||| | |||| ||||||||||||||||||||| || |||||||||||||||     
T  29812744 gtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttgtcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcac 29812843  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| ||||||||||||||| ||| ||||||||    
T  29812844 caaacgtgtcacgatttggaaaaacgtgacac 29812875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 364 - 493
Target Start/End: Complemental strand, 43402494 - 43402365
Alignment:
Q  364 tgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatc 463  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| |||| | |||| ||||||||||||||||||||  || ||||||||||||||| |    
T  43402494 tgttcaatcgtgacacgattttggagaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggttgtatcttgggtcgtacgcacc 43402395  T
Q  464 aaccgtgtcacgatttgggaaatcgtgaca 493  Q
    || |||||||||||||||||||| ||||||    
T  43402394 aaacgtgtcacgatttgggaaattgtgaca 43402365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 4569414 - 4569545
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| |||| | |||| ||||||||||||||||||||| || |||||||||||||||     
T  4569414 gtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcac 4569513  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||| ||  ||||| ||||||||    
T  4569514 caaccgtgtcacggttgtggaaaacgtgacac 4569545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 302 - 493
Target Start/End: Complemental strand, 31340808 - 31340616
Alignment:
Q  302 atcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttccttgatg-tgttcaatcgtgacacgattttgggaaaa-cgtgaca 399  Q
    ||||||||||||||||   |||||| ||||||||   |||||||||||||||||  || | | ||| ||||||||||| ||||||||||||| | |||||    
T  31340808 atcgtgacacgatttggcaaccgtgtcacgattttctaggcagtgagcatggtt--ttcagggtgtccaatcgtgacatgattttgggaaaaacatgaca 31340711  T
Q  400 cgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacga-tttgggaaatcgtgaca 493  Q
    ||||||||| |||||| |||| ||||||||||||||||||||| || ||||||||||||||| ||| |||| ||||| |||||||||||||||||    
T  31340710 cgattttcggcttgttgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgacacgattttgggaaatcgtgaca 31340616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 363 - 485
Target Start/End: Original strand, 46173197 - 46173318
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||||||||||||||||||||| ||||||||||  || |||||| |||||||||||||||||||||||||| || |||||||||||||||     
T  46173197 gtgtccaatcgtgacacgattttgggaaaacatgacacgattc-cggcttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcac 46173295  T
Q  463 caaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||| ||||||||    
T  46173296 caaccgtgtcacgaattgggaaa 46173318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 5236944 - 5236813
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||||||| |||||||||||||||||||||||||||| |||| | || | |||||||||||||| |||||| || |||||||||||||||     
T  5236944 gtgtccaatcgtgacacaattttgggaaaacgtgacacgattttcggcttgctgggaaagttttcaggataagtttggtcgtaccttgggtcgtacgcac 5236845  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| ||||||||||||||| ||| ||||||||    
T  5236844 caaacgtgtcacgatttggcaaaacgtgacac 5236813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 6096305 - 6096174
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| ||| || | ||  |||||||||||||||||||| || |||||||||||||||     
T  6096305 gtgtccaattgtgacacgattttgggaaaacgtgacacgattttcggcttattggacaaattttcaggataaggttggtcgtaccttgggtcgtacgcac 6096206  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||  |||||||||||||||||||| ||||||    
T  6096205 caaatgtgtcacgatttgggaaatcatgacac 6096174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 367 - 494
Target Start/End: Complemental strand, 8127146 - 8127019
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||| |||||||||||||||  |||||||||||||| ||||| | || ||||||||||||||||||||||| || |||||||||||| || ||||    
T  8127146 tcaatcgtgtcacgattttgggaaagtgtgacacgattttcaacttgctaggtacgttttcaggataaggttggtcgtatcttgggtcgtacacaccaac 8127047  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||||  || ||||||||    
T  8127046 cgtgtcacgatttggacaaacgtgacac 8127019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 368 - 479
Target Start/End: Original strand, 34490700 - 34490811
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||||||||||||||||||| |||||||||||||||||||| ||| || |||| ||||||||||||||||||||  || ||||||||||||||| ||| |    
T  34490700 caatcgtgacacgattttggaaaaacgtgacacgattttcggcttattgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaac 34490799  T
Q  468 gtgtcacgattt 479  Q
    ||||||||||||    
T  34490800 gtgtcacgattt 34490811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 40592352 - 40592479
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| | | |||||||||||||||||||||||| || ||||| |||||| || |||     
T  40592352 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctggacacgttttcaggataaggttggtcgtaccttggatcgtacacaccaat 40592451  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||||  || ||||||||    
T  40592452 cgtgtcacgatttggacaaacgtgacac 40592479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 363 - 479
Target Start/End: Complemental strand, 49200156 - 49200040
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||| |||| | |||| ||||||||||||||||||||| || |||||||||||||||     
T  49200156 gtgtccaatcgtgacacgatgttggggaaacgtgacacgattttcggcttgctgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcac 49200057  T
Q  463 caaccgtgtcacgattt 479  Q
    |||  ||||||||||||    
T  49200056 caaatgtgtcacgattt 49200040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 368 - 485
Target Start/End: Original strand, 7764137 - 7764255
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| |||| | |||| ||||||||||||||| || |||||||||||||||||||     
T  7764137 caatcgtgacacgattttgggaaaacgtgacacgatttttggcttgttgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaat 7764236  T
Q  467 cgtgtcacgatttgggaaa 485  Q
    |||| || |||| ||||||    
T  7764237 cgtgacatgattggggaaa 7764255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 302 - 481
Target Start/End: Complemental strand, 21711782 - 21711603
Alignment:
Q  302 atcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttccttgatg-tgttcaatcgtgacacgattttgggaaaacgtgacac 400  Q
    ||||||||||||||| |  | |||| ||||||||  ||||||||||||||||||  || | | || ||||||||| ||||||||||||||||||||||||    
T  21711782 atcgtgacacgatttcttcaacgtgtcacgattttccaggcagtgagcatggtt--ttcagggtgctcaatcgtgtcacgattttgggaaaacgtgacac 21711685  T
Q  401 gattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgg 481  Q
     |||||| | |||| |  | |||||||| |||||||||||||| || ||||||||||||||| ||| |||||||||||||||    
T  21711684 aattttcaaacttgctgagtacgttttccggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgg 21711603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 363 - 461
Target Start/End: Original strand, 44331250 - 44331348
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgca 461  Q
    |||||||||||||||||||||||||||||| ||||||||||||| | |||| | || ||||||||||||||||||||||| || |||||||||||||||    
T  44331250 gtgttcaatcgtgacacgattttgggaaaaagtgacacgatttttggcttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgca 44331348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 368 - 485
Target Start/End: Original strand, 7761950 - 7762067
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||||||||||||||||||||| |||||||||||||| | |||| | |||| | |||||||||||||||||||| || |||||||||||||||||||     
T  7761950 caatcgtgacacgattttgggaaa-cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaat 7762048  T
Q  467 cgtgtcacgatttgggaaa 485  Q
    |||| ||||||| ||||||    
T  7762049 cgtgacacgattggggaaa 7762067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 369 - 494
Target Start/End: Complemental strand, 36029608 - 36029482
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||| ||||||||||| ||||||||||||||||||| | |||| | || ||||||||||||||||||||||| || ||||||||||||||| ||| |    
T  36029608 aatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 36029509  T
Q  468 gtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||| ||| | ||| ||||||||    
T  36029508 gtgtcacggtttagaaaaacgtgacac 36029482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 30709361 - 30709494
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgtttt-caggataaggttggtcatagcttgggtcgtacgc 460  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||| | |||| | || ||||||| ||||||||| |||||| || ||||||||||||||    
T  30709361 gtgttcaatcgtgtcacgattttgagaaaacgtgacacaattttcaaacttgctgggtacgtttttcaggataagattggtcttaccttgggtcgtacgc 30709460  T
Q  461 atcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    | ||| ||||||||||||||| ||| ||||||||    
T  30709461 accaatcgtgtcacgatttggaaaaacgtgacac 30709494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 338 - 494
Target Start/End: Original strand, 39032096 - 39032252
Alignment:
Q  338 caggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataagg 436  Q
    ||||||| |||||||||| ||    ||| ||||||||| |||||||||||||||| |||||||||||||| | |||| | || ||||||||||||||| |    
T  39032096 caggcagggagcatggtttctcagggtgctcaatcgtgtcacgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaag 39032195  T
Q  437 ttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||| || ||||||||||||||| ||| |||| |||||||| | ||||||||||||    
T  39032196 ttggtcgtaccttgggtcgtacgcaccaatcgtgccacgattt-gaaaatcgtgacac 39032252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 40734181 - 40734310
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttc-gacttgttcggcac-gttttcaggataaggttggtcatagcttgggtcgtacgcatca 464  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||| |  ||  |||||||||||||||||||| || ||||| ||||||||||||    
T  40734181 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttggctacatttttcaggataaggttggtcgtaccttggatcgtacgcatca 40734280  T
Q  465 accgtgtcacgatttgggaaatcgtgacac 494  Q
    | |||||||||||||||  || ||||||||    
T  40734281 atcgtgtcacgatttggacaaacgtgacac 40734310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 8370059 - 8370186
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgac-ttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||||| ||||||||||||||||||||||||||||||| |  ||| | || ||||||| ||||||||||||||| || ||||||| ||||||| |||    
T  8370059 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaaattgctgggaacgtttttaggataaggttggtcgtaccttgggttgtacgcaccaa 8370158  T
Q  466 ccgtgtcacgatttgggaaatcgtgacac 494  Q
     ||||||||||||| ||||| ||||||||    
T  8370159 tcgtgtcacgattt-ggaaaacgtgacac 8370186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 367 - 494
Target Start/End: Complemental strand, 16264865 - 16264738
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||||| ||||||||||||||||||||||||||||||| | || | | || ||||||||||||||||||||||| || ||||||| ||||||| |||    
T  16264865 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaactagctgggtacgttttcaggataaggttggtcgtaccttgggtggtacgcaccaa 16264766  T
Q  466 ccgtgtcacgatttgggaaatcgtgacac 494  Q
     |||| |||||||| ||||| ||||||||    
T  16264765 tcgtgccacgattt-ggaaagcgtgacac 16264738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 1735875 - 1736001
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||   | ||| |||| ||||||||||||||| || ||||||| ||||||| |||     
T  1735875 tcaatcgtg-cacgattttgggaaaacgtgacacgattttcaacttgaatgacacatttttaggataaggttggtcgtaccttgggttgtacgcaccaat 1735973  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||||  || ||||||||    
T  1735974 cgtgtcacgatttggacaaacgtgacac 1736001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 29810549 - 29810680
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||||||||||||| | |||||||  ||| ||||| | |||| | | ||  |||||||||||||||||||| || |||||||||||||||     
T  29810549 gtgtccaatcgtgacacgattttagaaaaacgtagcacaatttttggcttgctggacaaattttcaggataaggttggtcgtaccttgggtcgtacgcac 29810648  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| ||||||||||||||||||| ||||||||    
T  29810649 caaacgtgtcacgatttgggaaaacgtgacac 29810680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 368 - 485
Target Start/End: Original strand, 45094849 - 45094967
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||||||||| ||||||||||| |||||||||||||| | |||||| |||| | |||||||||||||||||||| || |||||  ||||||||||||     
T  45094849 caatcgtgacacaattttgggaaatcgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcgtaccttggaacgtacgcatcaat 45094948  T
Q  467 cgtgtcacgatttgggaaa 485  Q
    |||| ||||||| ||||||    
T  45094949 cgtgacacgattggggaaa 45094967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 47923472 - 47923601
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgtttt-caggataaggttggtcatagcttgggtcgtacgcatca 464  Q
    ||||||||| |||  |||||||||||||||||||||||||| | |||| | || ||||||| |||||||||||||||| || ||||||| ||||||||||    
T  47923472 tcaatcgtgtcacatttttgggaaaacgtgacacgattttcaaacttgctgggtacgtttttcaggataaggttggtcgtaccttgggttgtacgcatca 47923571  T
Q  465 accgtgtcacgatttgggaaatcgtgacac 494  Q
    | |||||||||||||||  || ||||||||    
T  47923572 atcgtgtcacgatttggacaaacgtgacac 47923601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 367 - 494
Target Start/End: Complemental strand, 48438732 - 48438604
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    |||| |||| |||||||||||| |||||||||||||||||| | |||| | || ||||||||||||||||||||||  || ||||| ||||||||| |||    
T  48438732 tcaaccgtgtcacgattttggggaaacgtgacacgattttcaaacttgatgggtacgttttcaggataaggttggttgtaccttggatcgtacgcaccaa 48438633  T
Q  466 ccgtgtcacgatttgggaaatcgtgacac 494  Q
     |||||||||||||||  || ||||||||    
T  48438632 tcgtgtcacgatttggacaaacgtgacac 48438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 367 - 442
Target Start/End: Original strand, 36018329 - 36018404
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtc 442  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| | |||||||||| |||||||||||||||    
T  36018329 tcaatcgtgacacgattttgggaaaacgtgacacaattttcggcttgctgggcacgtttttaggataaggttggtc 36018404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 470
Target Start/End: Complemental strand, 27038622 - 27038454
Alignment:
Q  302 atcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacg 401  Q
    |||||||||||||||    | |||| ||||||||  ||||||||||||||||||    |  ||| |||||| || |||||||||||||||| ||||||||    
T  27038622 atcgtgacacgatttcatcaacgtgacacgatttcccaggcagtgagcatggtttgcagg-gtgctcaatcatgtcacgattttgggaaaatgtgacacg 27038524  T
Q  402 attttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtg 470  Q
    |||||| | |||||| || | ||||||||||||||||||||| || ||||||||||||||| ||| ||||    
T  27038523 attttcaaacttgttgggtatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtg 27038454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 328 - 494
Target Start/End: Complemental strand, 27027261 - 27027095
Alignment:
Q  328 cacgatttggcaggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttc-gacttgttcggcac-gttt 425  Q
    ||||||||  ||||||||||||||||||    || ||| ||||||||| |||||||||||||||||||||||||||||||  ||||| | |  ||  |||    
T  27027261 cacgatttcccaggcagtgagcatggtttgcaga-gtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctggctacatttt 27027163  T
Q  426 tcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||||||| || ||||||||||||||| ||| |||| |||| ||| ||||| ||||||||    
T  27027162 tcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacg-ttttggaaaacgtgacac 27027095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 494
Target Start/End: Complemental strand, 40845157 - 40845042
Alignment:
Q  380 gattttgggaaaacgtgacacgattttcgacttgttcggcacgttttc-aggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatt 478  Q
    |||||||||||||||||||||||||||| || || | | ||||||||  ||||||||||||||| || ||||||| ||||||| ||| ||||||||||||    
T  40845157 gattttgggaaaacgtgacacgattttcaacgtgctggacacgttttttaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatt 40845058  T
Q  479 tgggaaatcgtgacac 494  Q
    |||  || ||||||||    
T  40845057 tggacaaacgtgacac 40845042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 482
Target Start/End: Complemental strand, 44331934 - 44331815
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||||||||||||||| |||||||||||||||||| | |||  | || ||||||||| ||||| ||| ||| || |||||||||||| ||     
T  44331934 gtgtccaatcgtgacacgattttggaaaaacgtgacacgatttttggcttcctgggtacgttttcaagataaagttagtcgtaccttgggtcgtacacac 44331835  T
Q  463 caaccgtgtcacgatttggg 482  Q
    |||  |||||||||||||||    
T  44331834 caaatgtgtcacgatttggg 44331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 485
Target Start/End: Complemental strand, 5258627 - 5258509
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||||||||||||||||||||| |||||||||||||| | |||| | |||| | |||||||||||||||||||| || ||||  ||||||||||| |     
T  5258627 caatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgaatcgtacgcatcgat 5258528  T
Q  467 cgtgtcacgatttgggaaa 485  Q
     ||| ||||||| ||||||    
T  5258527 tgtggcacgattggggaaa 5258509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 485
Target Start/End: Complemental strand, 9636611 - 9636493
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||||| |||||||||||| | |||||||||||| | |||| | | || | |||||||||||||||||||| || ||||| |||||||||||||     
T  9636611 caatcgtgacatgattttgggaaatcatgacacgatttttggcttgatggacaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaat 9636512  T
Q  467 cgtgtcacgatttgggaaa 485  Q
    |||| ||||||| ||||||    
T  9636511 cgtggcacgattggggaaa 9636493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 33386247 - 33386360
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||||||||||||||||| | || ||||||||||||||| | |||| | |  | ||||||||||||||||||||| || ||||||||||||| ||||| |    
T  33386247 aatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatc 33386346  T
Q  468 gtgtcacgatttgg 481  Q
    ||| ||||||||||    
T  33386347 gtgacacgatttgg 33386360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 369 - 481
Target Start/End: Complemental strand, 37726189 - 37726076
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||||||||||||||||| | || ||||||||||||||| | |||||| |  | ||||||||||||||||||||| ||  |||||||||||| ||||| |    
T  37726189 aatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgttggttaagttttcaggataaggttggtcgtacattgggtcgtacgtatcaatc 37726090  T
Q  468 gtgtcacgatttgg 481  Q
    ||| ||||||||||    
T  37726089 gtgacacgatttgg 37726076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 40735112 - 40735241
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttc-gacttgttcggcac-gttttcaggataaggttggtcatagcttgggtcgtacgcatca 464  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||| | |  ||  |||||||||||||||||||| || ||||||||||||||| ||    
T  40735112 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctggctacatttttcaggataaggttggtcgtaccttgggtcgtacgcacca 40735211  T
Q  465 accgtgtcacgatttgggaaatcgtgacac 494  Q
    | ||||| | |||||||  || ||||||||    
T  40735212 atcgtgttatgatttggacaaacgtgacac 40735241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 302 - 442
Target Start/End: Complemental strand, 35926071 - 35925931
Alignment:
Q  302 atcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacg 401  Q
    |||||||||||||||    | |||| ||||||||  ||||||||||||||||||    |  ||| ||||||||| ||||| |||| ||||||||||||||    
T  35926071 atcgtgacacgatttcatcaacgtgtcacgatttcccaggcagtgagcatggtttgcagg-gtgctcaatcgtgtcacgagtttgagaaaacgtgacacg 35925973  T
Q  402 attttc-gacttgttcggcacgttttcaggataaggttggtc 442  Q
    ||||||  ||||||| || |||||||||||||||||||||||    
T  35925972 attttcaaacttgttgggtacgttttcaggataaggttggtc 35925931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 398 - 481
Target Start/End: Original strand, 24694767 - 24694850
Alignment:
Q  398 cacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgg 481  Q
    |||||||||  ||||| | | |||||||||||||||||||||||| || ||||||| ||||||| ||| |||||||||||||||    
T  24694767 cacgatttttaacttgctggacacgttttcaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttgg 24694850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 369 - 479
Target Start/End: Original strand, 27986048 - 27986159
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||||||||||| || | || ||||||||||||||| | |||| | |  | ||||||||||||||||||||| || ||||||||||||| ||||| |    
T  27986048 aatcgtgacacgattgtgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatc 27986147  T
Q  468 gtgtcacgattt 479  Q
    ||| ||||||||    
T  27986148 gtgacacgattt 27986159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 51398507 - 51398586
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtc 442  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||  ||||| |||| ||||| |||||| ||||||||    
T  51398507 gtgtccaattgtgacacgattttgggaaaacgtgacacaattttcggtttgttgggcaagtttttaggatatggttggtc 51398586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 481
Target Start/End: Original strand, 37408169 - 37408258
Alignment:
Q  393 cgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgg 481  Q
    ||||||||||||||| | |||||| |  | ||||||||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||    
T  37408169 cgtgacacgattttcaaacttgttggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgatttgg 37408258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 3393292 - 3393394
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||||||||||||||||||||| |||||||||||||| | |||| | |||| | |||||||||||| ||||||| || || || |||||| ||||||     
T  3393292 caatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagattttcaggataa-gttggtcgtacctaggatcgtacacatcaat 3393390  T
Q  467 cgtg 470  Q
    ||||    
T  3393391 cgtg 3393394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 23410817 - 23410686
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||||||| ||||||| |||||||| ||| |||||    ||| | |  ||||||||| |||||| |||||| || ||||||| || | ||     
T  23410817 gtgtccaatcgtgacacaattttggaaaaacgtgtcacaatttttatgttgcttgatacgttttcaagataagtttggtcgtaccttgggttgttcacac 23410718  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||||||||| ||| ||||||||    
T  23410717 caaccgtgtcacgatttggcaaaacgtgacac 23410686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 5260781 - 5260688
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||| | |||||| |||| | |||||||||||||||||||| ||  |||| |||||||||||||  ||| ||||||| ||||||    
T  5260781 cgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcgtactttggatcgtacgcatcaattgtggcacgattggggaaa 5260688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 494
Target Start/End: Original strand, 25929023 - 25929093
Alignment:
Q  424 tttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||||||||| ||  |||| ||||||| | ||||||||| |||||||||  |||||||||||    
T  25929023 tttcaggataaggttggtcgtacattggatcgtacgtaccaaccgtgttacgatttggccaatcgtgacac 25929093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 490
Target Start/End: Complemental strand, 27453471 - 27453350
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||||||||| |||| || | || ||||||||||||||| | |||| | |  | ||||||||||||||||||||| || |||| | |||||| ||||| |    
T  27453471 aatcgtgacatgattgtgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttgtgacgtacgtatcaatc 27453372  T
Q  468 gtgtcacgatttgggaaatcgtg 490  Q
    ||| |||||||| ||||||||||    
T  27453371 gtgacacgattt-ggaaatcgtg 27453350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 413
Target Start/End: Original strand, 16498748 - 16498797
Alignment:
Q  364 tgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttg 413  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||||| ||||    
T  16498748 tgttcaatcgtgatacgattttgggaaaatgtgtcacgattttcggcttg 16498797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 494
Target Start/End: Original strand, 36018401 - 36018444
Alignment:
Q  451 ggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||||    
T  36018401 ggtcgtacgcaccaaccatgtcacgatttgggaaaacgtgacac 36018444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 479
Target Start/End: Complemental strand, 53921943 - 53921855
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgta--cgcatcaaccgtgtcacgattt 479  Q
    ||||||||||||||  |  |||| | || ||||||||||||||||||||| || |||| ||||||  |||||||| |||| ||||||||    
T  53921943 cgtgacacgatttttaatatgtttgacaagttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcgtgacacgattt 53921855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 405
Target Start/End: Original strand, 800795 - 800831
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattt 405  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  800795 aatcgtgacacgattgtgggaaatcgtgacacgattt 800831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 2e-53; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 260 - 442
Target Start/End: Original strand, 38746349 - 38746530
Alignment:
Q  260 tgttgcaaagtgcctcaaaaatgatttttagcaaaattcaggatcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttcctt 359  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||| || ||||| | ||||||| |||||||||||||||||| ||||||||| |||    
T  38746349 tgttgcaaagtgcttcaaaaatgatttt-agcaaaattcaggatcgtggcatgatttatttaccgtgtcacgatttggcaggcagttagcatggtttctt 38746447  T
Q  360 gatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtc 442  Q
    || |||||||||||||||||  |||||| |||||||||||||||||||| |||| | | || |||||||||||||||||||||    
T  38746448 gaagtgttcaatcgtgacacatttttggaaaaacgtgacacgattttcggcttgctggacaagttttcaggataaggttggtc 38746530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 5057512 - 5057643
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||||||||||  ||| ||||||||||||||||||||| || ||| ||||||||||||    
T  5057512 gtgtccaatcgtgacacgattttggtaaaacgtgacacaattttcgacttgttgagcaagttttcaggataaggttggtcgtacctttggtcgtacgcat 5057611  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||| |||||||||| ||||||||    
T  5057612 caaccgtgtcacaatttgggaaaacgtgacac 5057643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 363 - 493
Target Start/End: Original strand, 32636504 - 32636635
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgtttt-caggataaggttggtcatagcttgggtcgtacgca 461  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||| | |||| ||||| |||||||||||||||| || |||||||| ||||||    
T  32636504 gtgtccaatcgtgacacgattttgggaaaacgtggcacgattttcgacttgctgggcaagtttttcaggataaggttggtcgtaccttgggtcttacgca 32636603  T
Q  462 tcaaccgtgtcacgatttgggaaatcgtgaca 493  Q
     ||| ||||||||||||||||||| |||||||    
T  32636604 ccaaacgtgtcacgatttgggaaaacgtgaca 32636635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 42426722 - 42426591
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||  ||| | |||| ||||||||||||||||||||| || |||||||||||||||     
T  42426722 gtgtccaatcgtgacacgattttgggaaaacgtgacacaattttcggtttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcac 42426623  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| | ||||||||||||||||| ||||||||    
T  42426622 caaacatgtcacgatttgggaaaacgtgacac 42426591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 367 - 494
Target Start/End: Complemental strand, 16651105 - 16650978
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||| ||||||||||||||||||||||||||||||||   ||||||| || ||||||||||||||||||||||| || ||||| ||||||||| ||||    
T  16651105 tcaatcatgacacgattttgggaaaacgtgacacgatttataacttgttgggtacgttttcaggataaggttggtcgtaccttggatcgtacgcaccaac 16651006  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||||| |||  |||||||    
T  16651005 cgtgtcacgatttggcaaaatgtgacac 16650978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 338 - 494
Target Start/End: Complemental strand, 14520775 - 14520619
Alignment:
Q  338 caggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataagg 436  Q
    ||||||| |||||||||| ||    ||| ||||||||| || |||||||||||||||||||||||||||| | |||||| || |||||||||||||||||    
T  14520775 caggcagggagcatggtttctcagggtgctcaatcgtgtcatgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataagg 14520676  T
Q  437 ttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||| || |||||||||||||||| || ||||||||||||| ||||| ||||||||    
T  14520675 ttggtcgtaccttgggtcgtacgcattaatcgtgtcacgattt-ggaaaacgtgacac 14520619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 13487890 - 13488015
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||||||||||||||||||||||||    ||||||||||| |||| | |||| ||||||||||||||||||||| || ||||||||||||||| |||     
T  13487890 tcaatcgtgacacgattttgggaaaacag--cacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaa 13487987  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||||||||| ||||||||    
T  13487988 cgtgtcacgatttgggaaaacgtgacac 13488015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 393 - 494
Target Start/End: Original strand, 27015025 - 27015126
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgac 492  Q
    |||||||||||||||  |||||| |||| ||||||||||||||||||||| || ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  27015025 cgtgacacgattttcagcttgttgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 27015124  T
Q  493 ac 494  Q
    ||    
T  27015125 ac 27015126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 11916552 - 11916680
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||||| || | ||||||||||| ||||||||| || ||||||||||||||| |||    
T  11916552 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtatgttttcaggatcaggttggtcgtaccttgggtcgtacgcaccaa 11916651  T
Q  466 ccgtgtcacgatttgggaaatcgtgacac 494  Q
     ||| |||||||||| |||| ||||||||    
T  11916652 tcgtatcacgatttgagaaaacgtgacac 11916680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 363 - 478
Target Start/End: Original strand, 13239433 - 13239548
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||||||||||||||| ||||||||| |||||||||||||| || |||||| | | || ||||||||||||||||||||| || ||||||||||||||||    
T  13239433 gtgttcaatcgtgacaagattttgggtaaacgtgacacgatctttgacttgctggacaagttttcaggataaggttggtcgtaccttgggtcgtacgcat 13239532  T
Q  463 caaccgtgtcacgatt 478  Q
    ||| |||| |||||||    
T  13239533 caatcgtgacacgatt 13239548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 363 - 478
Target Start/End: Original strand, 37438826 - 37438942
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgca 461  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| | |||||| |||| | |||||||||||||||| ||| || |||||||||||||||    
T  37438826 gtgtccaatcgtgacatgattttgggaaaacgtgacacgatttttggcttgttgggcaagattttcaggataaggtttgtcgtaccttgggtcgtacgca 37438925  T
Q  462 tcaaccgtgtcacgatt 478  Q
    |||| |||| |||||||    
T  37438926 tcaatcgtgacacgatt 37438942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 382 - 494
Target Start/End: Original strand, 12083773 - 12083885
Alignment:
Q  382 ttttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttg 480  Q
    |||||||||||||||||||||||||| | |||||| || ||||||||||||||||||||||| || ||||||||||| ||| ||| |||||||||||||     
T  12083773 ttttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtatgcaccaatcgtgtcacgattt- 12083871  T
Q  481 ggaaatcgtgacac 494  Q
    ||||| ||||||||    
T  12083872 ggaaaacgtgacac 12083885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 494
Target Start/End: Original strand, 19806117 - 19806218
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgac 492  Q
    |||||||||||||||| |||| | |||||||||| ||||||||||||||| || ||||||||||||||| ||| |||||||||| |||||||| ||||||    
T  19806117 cgtgacacgattttcggcttgctaggcacgtttttaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgacttgggaaaacgtgac 19806216  T
Q  493 ac 494  Q
    ||    
T  19806217 ac 19806218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 30683395 - 30683316
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtc 442  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||    
T  30683395 gtgtccaatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctaggcaagttttcaggataaggttggtc 30683316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 273 - 458
Target Start/End: Original strand, 40146641 - 40146825
Alignment:
Q  273 ctcaaaaatgatttttagcaaaattcaggatcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttccttgatg-tgttcaat 371  Q
    |||||||||| ||||  | ||| ||||| ||||||||||||| | || |||||| ||||||||   ||||||||| |||||||  || | | ||| ||||    
T  40146641 ctcaaaaatggttttgggaaaagttcagaatcgtgacacgatctatgaaccgtggcacgattttctaggcagtgaacatggtt--ttcagggtgtccaat 40146738  T
Q  372 cgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtac 458  Q
    ||||||||||||||||||||| ||||| ||||||||  |||||| | ||||||||||||| || ||||||| || ||||||||||||    
T  40146739 cgtgacacgattttgggaaaatgtgactcgattttcagcttgttggtcacgttttcaggaaaaagttggtcgtaccttgggtcgtac 40146825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 494
Target Start/End: Original strand, 11181437 - 11181538
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgac 492  Q
    ||||||||||||||||| ||||| ||||||| | || |||||||||||||||| | ||||| ||||| |||||||||||||| ||||||  |||||||||    
T  11181437 cgtgacacgattttcgatttgtttggcacgtatacaagataaggttggtcataccgtgggttgtacgtatcaaccgtgtcacaatttggtcaatcgtgac 11181536  T
Q  493 ac 494  Q
    ||    
T  11181537 ac 11181538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 31004734 - 31004862
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||||| ||||||| ||||||||||||| ||||| ||| ||||| | |||||| |||| ||||||||||||||  ||  |||||||||||||| |||    
T  31004734 tcaatcgtgtcacgattgtgggaaaacgtgatacgatattcaacttgctgggcacgttttttaggataaggttggttgtactttgggtcgtacgcaccaa 31004833  T
Q  466 ccgtgtcacgatttgggaaatcgtgacac 494  Q
     |||||||||||||||  || ||||||||    
T  31004834 tcgtgtcacgatttggacaaacgtgacac 31004862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 42428905 - 42428826
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtc 442  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | |||| | |||| ||||| |||||||||||||||    
T  42428905 gtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagtttttaggataaggttggtc 42428826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 479
Target Start/End: Original strand, 535614 - 535700
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgattt 479  Q
    |||||||||||||||| |||| | | || ||||||||||||||||||||| || ||||||||||| ||| ||| |||||||||||||    
T  535614 cgtgacacgattttcggcttgctggacaagttttcaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcacgattt 535700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 479
Target Start/End: Complemental strand, 39468989 - 39468903
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgattt 479  Q
    |||||||||||||||| |||| | | |||||||| ||||||||||||||| || ||||||||||| ||| ||| ||||||| |||||    
T  39468989 cgtgacacgattttcggcttgctggacacgtttttaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcatgattt 39468903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 9352917 - 9353030
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||| ||||||| || |||| ||||||||||||||| | |||| | |  | ||||||||||||||||||||| || ||||||||||||  ||||| |    
T  9352917 aatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacatatcaatc 9353016  T
Q  468 gtgtcacgatttgg 481  Q
    ||| ||||||||||    
T  9353017 gtggcacgatttgg 9353030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 485
Target Start/End: Original strand, 25412472 - 25412565
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||| | |||| | |||| | |||||||||||||||||||| || ||||| ||||||||||||| |||| ||||||| ||||||    
T  25412472 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaa 25412565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 368 - 406
Target Start/End: Original strand, 213030 - 213068
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgatttt 406  Q
    |||||||||||||||||||||||||||||||||||||||    
T  213030 caatcgtgacacgattttgggaaaacgtgacacgatttt 213068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 363 - 405
Target Start/End: Complemental strand, 28751069 - 28751027
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattt 405  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  28751069 gtgttcaatcgtgacacgattttgggaaaacgtgacacaattt 28751027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 485
Target Start/End: Original strand, 13342771 - 13342864
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||| | |||| | |||| | |||||||||||||||||||| || ||| | ||||||||||||| |||| ||||||| ||||||    
T  13342771 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttagatcgtacgcatcaatcgtggcacgattggggaaa 13342864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 429 - 481
Target Start/End: Complemental strand, 16650044 - 16649992
Alignment:
Q  429 ggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgg 481  Q
    |||||||||||||| || ||||| ||||||||| |||||||||||||||||||    
T  16650044 ggataaggttggtcgtaccttggatcgtacgcaccaaccgtgtcacgatttgg 16649992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 451 - 494
Target Start/End: Complemental strand, 3076024 - 3075981
Alignment:
Q  451 ggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||||| |||||||||||||| ||||||||||||    
T  3076024 ggtcgtacgcatcaactgtgtcacgatttggcaaatcgtgacac 3075981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 478
Target Start/End: Original strand, 30182329 - 30182384
Alignment:
Q  423 ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatt 478  Q
    |||||||||||||||||||| || ||||| ||||||||||||| |||| |||||||    
T  30182329 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgatt 30182384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 406
Target Start/End: Complemental strand, 30683308 - 30683269
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgatttt 406  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  30683308 tcaatcgtgacacaattttgggaaaacgtgacacgatttt 30683269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 480
Target Start/End: Original strand, 36931986 - 36932044
Alignment:
Q  422 gttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttg 480  Q
    ||||||||||||||||||||| || ||||||||||||| ||||| |||| ||| |||||    
T  36931986 gttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacaatttg 36932044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 494
Target Start/End: Original strand, 533538 - 533581
Alignment:
Q  451 ggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||    
T  533538 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacac 533581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 404
Target Start/End: Complemental strand, 30631839 - 30631804
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgatt 404  Q
    ||||||||||||||||||||||| ||||||||||||    
T  30631839 aatcgtgacacgattttgggaaatcgtgacacgatt 30631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 478
Target Start/End: Complemental strand, 36074471 - 36074416
Alignment:
Q  423 ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatt 478  Q
    |||||||||||||||||||| || ||||| ||||||||||||| | || |||||||    
T  36074471 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcatggcacgatt 36074416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 494
Target Start/End: Original strand, 38746552 - 38746599
Alignment:
Q  447 cttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||||| ||| |||||||| |||||||||||| ||||||    
T  38746552 cttgggtcgtacgcaccaaacgtgtcacaatttgggaaatcatgacac 38746599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 407
Target Start/End: Complemental strand, 24136374 - 24136336
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttc 407  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  24136374 aatcgtgacacgatcttgggaaatcgtgacacgattttc 24136336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 533492 - 533541
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtc 442  Q
    ||||||||| |||||| |||| | |||| |||||||||||||||||||||    
T  533492 cgtgacacggttttcggcttgctgggcaagttttcaggataaggttggtc 533541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 405
Target Start/End: Complemental strand, 9789699 - 9789663
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattt 405  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  9789699 aatcgtgacacgattgtgggaaatcgtgacacgattt 9789663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 405
Target Start/End: Complemental strand, 18442123 - 18442087
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattt 405  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  18442123 aatcgtgacacgattgtgggaaatcgtgacacgattt 18442087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 368 - 494
Target Start/End: Complemental strand, 80983 - 80857
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| | |||| ||||||||||||||||||||| || ||||||||||||||| ||| |    
T  80983 caatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaac 80884  T
Q  468 gtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||||||||||||||||    
T  80883 gtgtcacgatttgggaaatcgtgacac 80857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 7e-44; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 363 - 493
Target Start/End: Complemental strand, 42435696 - 42435566
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||| | |||| ||||||||||||||||||||| || |||||||||||||||     
T  42435696 gtgtccaatcgtgacacgattttggggaaacgtgacacgattttcgtcttgcttggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcac 42435597  T
Q  463 caaccgtgtcacgatttgggaaatcgtgaca 493  Q
    ||| |||||||||||||||||||||||||||    
T  42435596 caaacgtgtcacgatttgggaaatcgtgaca 42435566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 43036104 - 43036235
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||| || || ||||| |||||||||     
T  43036104 gtgtccaatcgtgacacgattttggaaaaacgtgacacgattttcgacttgttgggcaagttttcaggataaggttgatcgtaccttggatcgtacgcac 43036203  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| ||||||||||||||||||| ||||||||    
T  43036204 caaacgtgtcacgatttgggaaaacgtgacac 43036235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 15212467 - 15212598
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||| |  ||| ||||||||||||||||||||| || |||||||||||||||     
T  15212467 gtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggttggtcgtaccttgggtcgtacgcac 15212566  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| ||||||||||||| |||||  |||||||    
T  15212567 caaacgtgtcacgatttaggaaaatgtgacac 15212598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 4743681 - 4743549
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgtttt-caggataaggttggtcatagcttgggtcgtacgca 461  Q
    |||| ||||||||||||||||||| | |||||||||||||||||||||||| | |||||||||| |||||||||||||||| || | |||||||||||||    
T  4743681 gtgtccaatcgtgacacgattttgaggaaacgtgacacgattttcgacttgcttggcacgtttttcaggataaggttggtcgtaccgtgggtcgtacgca 4743582  T
Q  462 tcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||| |||||| ||| ||| ||||    
T  4743581 tcaaccgtgtcacaatttggcaaaacgtcacac 4743549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 30143023 - 30143154
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||| |||| | | || ||||| ||||||||||||||| ||  ||||||||||||||     
T  30143023 gtgtccaatcgtgacacgattttgggaaaatgtgacacgattttcggcttgctggacaagttttaaggataaggttggtcgtactttgggtcgtacgcac 30143122  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||||||||| ||| ||||||||    
T  30143123 caaccgtgtcacgatttggcaaaacgtgacac 30143154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 363 - 479
Target Start/End: Original strand, 4733506 - 4733622
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  |   |||||||||||||||  ||| ||| || |||||||||||||||     
T  4733506 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcggctttctaaacacgttttcaggatacagtttgtcgtaccttgggtcgtacgcac 4733605  T
Q  463 caaccgtgtcacgattt 479  Q
    |||||||||||||||||    
T  4733606 caaccgtgtcacgattt 4733622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 363 - 479
Target Start/End: Original strand, 11383469 - 11383585
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||| |||||||||||||||||||||||||||||||||||  |||| | ||||  |||||| ||||||||||||| ||  |||||||||||||||    
T  11383469 gtgtccaattgtgacacgattttgggaaaacgtgacacgattttcagcttgctgggcaaattttcaagataaggttggtcgtactttgggtcgtacgcat 11383568  T
Q  463 caaccgtgtcacgattt 479  Q
    |||||||||||||||||    
T  11383569 caaccgtgtcacgattt 11383585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 363 - 479
Target Start/End: Original strand, 27810979 - 27811095
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||||| |||| | |||| ||||||||||||||||||||| || ||||||| |||||||     
T  27810979 gtgtccaatcgtgacacgattttgagaaaatgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtatcttgggttgtacgcac 27811078  T
Q  463 caaccgtgtcacgattt 479  Q
    ||| |||||||||||||    
T  27811079 caaacgtgtcacgattt 27811095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 363 - 479
Target Start/End: Original strand, 40221227 - 40221343
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||| |||||||||||||||||||||||||||||||  |||||| | |||||||||||||||||||| ||| |  |||||||||||||||     
T  40221227 gtgtccaatcgtgtcacgattttgggaaaacgtgacacgattttcagcttgttggacacgttttcaggataaggtttgtcgtgccttgggtcgtacgcac 40221326  T
Q  463 caaccgtgtcacgattt 479  Q
    ||| |||||||||||||    
T  40221327 caaacgtgtcacgattt 40221343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 22975997 - 22976128
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  |||| | | || ||||||||||||||||| ||| ||  |||||||| |||||     
T  22975997 gtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcagcttgcttgacaagttttcaggataaggtttgtcgtacattgggtcgcacgcac 22976096  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| |||||||||||| |||||||||| ||||    
T  22976097 caaacgtgtcacgattcgggaaatcgtaacac 22976128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 363 - 485
Target Start/End: Complemental strand, 12703126 - 12703004
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  |||| |  ||| | ||||||||||||||||||| ||  ||||||||||||||     
T  12703126 gtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcagcttgctaagcaagctttcaggataaggttggtcgtacattgggtcgtacgcac 12703027  T
Q  463 caaccgtgtcacgatttgggaaa 485  Q
    ||  |||||||||||||||||||    
T  12703026 catacgtgtcacgatttgggaaa 12703004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 4731339 - 4731470
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||||||||||||||||||||| ||||| |||||||| |||| | | ||||||||||| ||||| |||||| || |||||| |||| |||     
T  4731339 gtgtccaatcgtgacacgattttgggaaaacatgacatgattttcggcttgctggacacgttttcagaataagattggtcgtaccttgggccgtaggcac 4731438  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||| |||||||||||||| ||| ||||||||    
T  4731439 caactgtgtcacgatttggcaaaacgtgacac 4731470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 368 - 485
Target Start/End: Complemental strand, 1746701 - 1746583
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||||||||||||||||||||| |||||||||||||| | |||| | |||| | |||||||||||||||||||| || ||||| |||||||||||||     
T  1746701 caatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaat 1746602  T
Q  467 cgtgtcacgatttgggaaa 485  Q
    |||| ||||||| ||||||    
T  1746601 cgtggcacgattggggaaa 1746583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 368 - 480
Target Start/End: Original strand, 10014845 - 10014957
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||||||||||||||||| || | |||||||||||| | | || | ||||||||| |||||||||||||||| || ||||||||||| ||||||| |    
T  10014845 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 10014944  T
Q  468 gtgtcacgatttg 480  Q
    |||||||||||||    
T  10014945 gtgtcacgatttg 10014957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 338 - 481
Target Start/End: Original strand, 19175284 - 19175428
Alignment:
Q  338 caggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataagg 436  Q
    ||||||| |||||||||| ||    ||| ||||||||| ||||||||||||||||||||||| ||||||| | |||| | || |||||||||||||||||    
T  19175284 caggcagggagcatggtttctcagggtgctcaatcgtgtcacgattttgggaaaacgtgacatgattttcaaacttgctgggtacgttttcaggataagg 19175383  T
Q  437 ttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgg 481  Q
    ||||| ||| ||||||||||| ||| ||| |||| ||||||||||    
T  19175384 ttggttataccttgggtcgtatgcaccaatcgtgccacgatttgg 19175428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 494
Target Start/End: Original strand, 4283039 - 4283140
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgac 492  Q
    |||||||||||||||| |||| | |||| ||||||||||||||||||||| || ||||||||||| ||| ||| ||||| | ||||||||||||||||||    
T  4283039 cgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgttaggatttgggaaatcgtgac 4283138  T
Q  493 ac 494  Q
    ||    
T  4283139 ac 4283140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 369 - 485
Target Start/End: Complemental strand, 34254810 - 34254693
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||| |||||||||||||||||| |||||||||||||| |  ||| | |||| | |||||||||||||||||||| || ||||||||||||||||||| |    
T  34254810 aatcatgacacgattttgggaaatcgtgacacgatttttggattgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatc 34254711  T
Q  468 gtgtcacgatttgggaaa 485  Q
    ||| ||||||| ||||||    
T  34254710 gtggcacgattggggaaa 34254693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 367 - 490
Target Start/End: Original strand, 5702060 - 5702184
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||||| ||||||||||| ||||||||||||||||||| | |||| | || || |||||||||||||||||||| || ||||| | ||||||| |||    
T  5702060 tcaatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgctgggtacattttcaggataaggttggtcgtaccttggattgtacgcaccaa 5702159  T
Q  466 ccgtgtcacgatttgggaaatcgtg 490  Q
     ||||||||||||||| ||| ||||    
T  5702160 tcgtgtcacgatttggcaaaacgtg 5702184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 485
Target Start/End: Complemental strand, 34256987 - 34256869
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||||||||||||||||||||| |||||||||||||| | |||| |  ||| | ||||||||||||| |||||  || |||||||||||||||||||     
T  34256987 caatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgagcaagattttcaggataagattggttgtaccttgggtcgtacgcatcaat 34256888  T
Q  467 cgtgtcacgatttgggaaa 485  Q
    |||| ||||||| ||||||    
T  34256887 cgtggcacgattggggaaa 34256869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 368 - 479
Target Start/End: Complemental strand, 19945822 - 19945710
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||||||||||||||| ||||| |||||||||||||| | |||||| || | | ||||||||||||||||| || || ||||| |||||||||||||     
T  19945822 caatcgtgacacgattttaggaaatcgtgacacgatttttggcttgttggggaagattttcaggataaggttgatcgtaccttggatcgtacgcatcaat 19945723  T
Q  467 cgtgtcacgattt 479  Q
    |||| ||||||||    
T  19945722 cgtggcacgattt 19945710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 475
Target Start/End: Complemental strand, 1345857 - 1345744
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtc--atagcttgggtcgtacgc 460  Q
    |||||||||||||||||||||| | ||||| ||||||| ||||||  |||| | | ||||||||||||||||||||||||  | | ||||||||||||||    
T  1345857 gtgttcaatcgtgacacgattt-gagaaaatgtgacacaattttcagcttgcttgacacgttttcaggataaggttggtcgtacaccttgggtcgtacgc 1345759  T
Q  461 atcaaccgtgtcacg 475  Q
    ||||||| |||||||    
T  1345758 atcaaccatgtcacg 1345744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 368 - 478
Target Start/End: Original strand, 31217942 - 31218053
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||| ||||||||||||||||||| |||||||||||||| | |||||| |||| | |||| ||||||||||||||| || ||||| || ||||||||||     
T  31217942 caattgtgacacgattttgggaaatcgtgacacgatttttggcttgttgggcaagatttttaggataaggttggtcgtaccttggatcatacgcatcaat 31218041  T
Q  467 cgtgtcacgatt 478  Q
    |||| |||||||    
T  31218042 cgtgacacgatt 31218053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 409 - 479
Target Start/End: Original strand, 4696251 - 4696321
Alignment:
Q  409 acttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgattt 479  Q
    ||||||| |||||||||||||||||||||||||| || ||||||||||||||| ||| |||| ||||||||    
T  4696251 acttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgacacgattt 4696321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 479
Target Start/End: Original strand, 42497900 - 42498012
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||||||||||||||||||  ||||||||||| | | |||| | |||| | |||||||||||||||| ||| || |||||||| ||||||||||     
T  42497900 caatcgtgacacgattttgggaaattgtgacacgattattggcttgctgggcaagattttcaggataaggttagtcgtaccttgggtcctacgcatcaat 42497999  T
Q  467 cgtgtcacgattt 479  Q
    |||| || |||||    
T  42498000 cgtgacatgattt 42498012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 425 - 494
Target Start/End: Original strand, 33351893 - 33351962
Alignment:
Q  425 ttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||||||| || |||||||| |||||| ||| ||||||| ||||||||||| ||||||||    
T  33351893 ttcaggataaggttggtcgtaccttgggtcatacgcaccaaacgtgtcatgatttgggaaaacgtgacac 33351962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 494
Target Start/End: Complemental strand, 3051610 - 3051510
Alignment:
Q  394 gtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgaca 493  Q
    ||||||||||||| | | |||| | |||||||||| ||||||||||||| ||  |||||||||| ||||||| |||| ||||| || || ||||||||||    
T  3051610 gtgacacgatttttggcatgtttgacacgttttcaagataaggttggtcgtacattgggtcgtatgcatcaatcgtgacacgaatttggcaatcgtgaca 3051511  T
Q  494 c 494  Q
    |    
T  3051510 c 3051510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 485
Target Start/End: Original strand, 17982363 - 17982456
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||| | |||| | |||| | |||| ||||||||||||||| || ||||| ||||||||||||| |||| ||||||| ||||||    
T  17982363 cgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaa 17982456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 405
Target Start/End: Original strand, 2627428 - 2627464
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattt 405  Q
    ||||||||||||||||||||||| |||||||||||||    
T  2627428 aatcgtgacacgattttgggaaatcgtgacacgattt 2627464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 494
Target Start/End: Original strand, 23799209 - 23799284
Alignment:
Q  419 cacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||| || |||||||||||| ||  |||||||||||||| |||  ||||||||||||||  || ||||||||    
T  23799209 cacgtttttagaataaggttggtcgtacgttgggtcgtacgcaccaattgtgtcacgatttggacaaacgtgacac 23799284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 494
Target Start/End: Original strand, 44303564 - 44303667
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttc-aggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttggg-aaatcgtg 490  Q
    |||||||||||||| | |||| | |||| | |||| ||||||||||||||| || ||||| || ||||||||||  ||| ||||||| ||| ||||||||    
T  44303564 cgtgacacgatttttggcttgctgggcaagatttccaggataaggttggtcgtaccttggatcatacgcatcaattgtggcacgattggggaaaatcgtg 44303663  T
Q  491 acac 494  Q
    ||||    
T  44303664 acac 44303667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 407
Target Start/End: Original strand, 1261524 - 1261562
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttc 407  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  1261524 aatcgtgacacgatcttgggaaatcgtgacacgattttc 1261562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 363 - 399
Target Start/End: Original strand, 33351852 - 33351888
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgaca 399  Q
    |||| |||||||||||||||||||||||||| |||||    
T  33351852 gtgtccaatcgtgacacgattttgggaaaacatgaca 33351888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 4e-42; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 302 - 494
Target Start/End: Complemental strand, 14070381 - 14070189
Alignment:
Q  302 atcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttccttgatg-tgttcaatcgtgacacgattttgggaaaacgtgacac 400  Q
    |||||||||||||||  | | |||| ||||||||   |||||||||||||||||  || | | |||||||||||||||||||||||||||||||||||||    
T  14070381 atcgtgacacgattttggcatcgtggcacgattttcaaggcagtgagcatggtt--ttcagggtgttcaatcgtgacacgattttgggaaaacgtgacac 14070284  T
Q  401 gattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||| | |||| | |||||| ||||||||||||| || ||||||||||| ||| ||| ||||||||||||||||||| ||||||||    
T  14070283 gattttcgacttgctaggcaagtttttcaagataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcacgatttgggaaaacgtgacac 14070189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 302 - 494
Target Start/End: Complemental strand, 14380409 - 14380217
Alignment:
Q  302 atcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttccttgatg-tgttcaatcgtgacacgattttgggaaaacgtgacac 400  Q
    |||||||||||||||  | | |||| ||||||||   |||||||||||||||||  || | | |||||||||||||||||||||||||||||||||||||    
T  14380409 atcgtgacacgattttggcatcgtggcacgattttcaaggcagtgagcatggtt--ttcagggtgttcaatcgtgacacgattttgggaaaacgtgacac 14380312  T
Q  401 gattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||| | |||| | |||||| ||||||||||||| || ||||||||||| ||| ||| ||||||||||||||||||| ||||||||    
T  14380311 gattttcgacttgctaggcaagtttttcaagataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcacgatttgggaaaacgtgacac 14380217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 47676623 - 47676492
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||| | |||| ||||||||||||||||||||| || |||||||||||||||     
T  47676623 gtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcac 47676524  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| ||||||||||||| ||||| ||||||||    
T  47676523 caaacgtgtcacgattttggaaaacgtgacac 47676492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 368 - 494
Target Start/End: Complemental strand, 6360612 - 6360486
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||| |||| ||||||||||||| ||||||| || ||||||||||||||| ||| |    
T  6360612 caattgtgacacgattttggggaaacgtgacacgattttcggcttgttgggcaagttttcaggataatgttggtcgtatcttgggtcgtacgcaccaaac 6360513  T
Q  468 gtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||||||||| |||||||    
T  6360512 gtgtcacgatttgggaaattgtgacac 6360486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 363 - 485
Target Start/End: Complemental strand, 47674430 - 47674308
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||| | |||| ||||||||||||||||||||| || ||||||| |||||||     
T  47674430 gtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggttgtacgcac 47674331  T
Q  463 caaccgtgtcacgatttgggaaa 485  Q
    ||| ||||||||||||| |||||    
T  47674330 caaacgtgtcacgattttggaaa 47674308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 2647280 - 2647392
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccg 468  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||| || ||||||||||||||| ||| ||    
T  2647280 aatcgtgtcacgattttgggaaaacgtgacatgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcg 2647379  T
Q  469 tgtcacgatttgg 481  Q
    |||||||||||||    
T  2647380 tgtcacgatttgg 2647392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 302 - 494
Target Start/End: Original strand, 6570213 - 6570405
Alignment:
Q  302 atcgtgacacgatttgtgtaccgtgccacgatttggcagg-cagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacac 400  Q
    |||||||||||||||||| |||||| |||||||| ||||| | ||||||||||||  |||| | || |||| ||||||| ||||| || || ||||||||    
T  6570213 atcgtgacacgatttgtggaccgtgtcacgattttgcagggccgtgagcatggttttttgagg-gtccaattgtgacacaattttaggcaatcgtgacac 6570311  T
Q  401 gattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||| | | || | | |||||||| |||||||||||| || || |||||||| ||||||||||||||||||||||||||  |||||||||||    
T  6570312 gatttttggcatgcttgacacgtttttaggataaggttgatcgtaccttgggtcatacgcatcaaccgtgtcacgatttggccaatcgtgacac 6570405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 363 - 478
Target Start/End: Original strand, 23554720 - 23554836
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgca 461  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| | |||| | |||||||||||||||||||| ||  ||||||||||||||    
T  23554720 gtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctgggcaagtttttcaggataaggttggtcgtacattgggtcgtacgca 23554819  T
Q  462 tcaaccgtgtcacgatt 478  Q
    |||| |||| |||||||    
T  23554820 tcaatcgtgacacgatt 23554836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 18126326 - 18126456
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||| ||||||||||| ||||||||| |||||||||| |||||| |||| ||||||||||||| ||||||| || |||||||||||||||     
T  18126326 gtgtccaatcgtg-cacgattttggaaaaacgtgatacgattttcggcttgttgggcaagttttcaggataatgttggtcgtaccttgggtcgtacgcac 18126424  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| |||||||||||||| |||| ||||||||    
T  18126425 caaacgtgtcacgatttgagaaaacgtgacac 18126456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 339 - 494
Target Start/End: Original strand, 33332003 - 33332158
Alignment:
Q  339 aggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggtt 438  Q
    |||||||||||||||||  ||   ||| ||||| ||| ||||||||||| ||||||||||||||||||| ||||| | ||||| |||||| |||||||||    
T  33332003 aggcagtgagcatggttttttagggtgctcaattgtgtcacgattttggaaaaacgtgacacgattttcaacttgctgggcacattttcaagataaggtt 33332102  T
Q  439 ggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||| || ||||||||||||||| ||| |||||||||||||||  ||| |||||||    
T  33332103 ggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaattgtgacac 33332158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 368 - 494
Target Start/End: Original strand, 27347610 - 27347735
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||||||||||||||||||||||||| ||||| |||||||| |||| | |||| ||||||||||||||||||||| || ||||||||||||||| ||| |    
T  27347610 caatcgtgacacgattttgggaaaac-tgacatgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaac 27347708  T
Q  468 gtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||| |||||||||  |||||||    
T  27347709 gtgtcacggtttgggaaaatgtgacac 27347735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 363 - 479
Target Start/End: Original strand, 43863942 - 43864058
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||||||||||||||||||||||||||||||||||||  ||||| || | ||||||||||||||||||||| || |||||||||||||||     
T  43863942 gtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggtttgttaggaaagttttcaggataaggttggtcgtaccttgggtcgtacgcac 43864041  T
Q  463 caaccgtgtcacgattt 479  Q
    ||| |||| ||| ||||    
T  43864042 caaacgtgacacaattt 43864058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 273 - 479
Target Start/End: Original strand, 2389666 - 2389871
Alignment:
Q  273 ctcaaaaatgatttttagcaaaattcaggatcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttccttgatgtgttcaatc 372  Q
    |||||||||| ||||  | ||| ||||  |||||||||| |||| || |||||| ||||||||   || ||||||||||||||  | |  |||| |||||    
T  2389666 ctcaaaaatggttttgggaaaagttcataatcgtgacacaatttatgaaccgtggcacgattttctagacagtgagcatggtttttagg-gtgtccaatc 2389764  T
Q  373 gtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtc 472  Q
    |||||||||||||| ||||| ||||||||||||||  |||| | || ||||||||||||||||||||||| || ||||| |||||| || ||| ||||||    
T  2389765 gtgacacgattttgagaaaatgtgacacgattttcagcttgctgggaacgttttcaggataaggttggtcgtaccttggatcgtacacaccaaacgtgtc 2389864  T
Q  473 acgattt 479  Q
    |||||||    
T  2389865 acgattt 2389871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 363 - 493
Target Start/End: Original strand, 48489111 - 48489241
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||||||| ||||||||||||| |||||||||||||||| |||| | |||| | |||| | || ||||||||||||||||||| ||||||| |||||||     
T  48489111 gtgttcaaccgtgacacgatttagggaaaacgtgacacggtttttggcttgctgggcatgcttccaggataaggttggtcataccttgggttgtacgcac 48489210  T
Q  463 caaccgtgtcacgatttgggaaatcgtgaca 493  Q
    ||| ||||||||||||||| ||| |||||||    
T  48489211 caatcgtgtcacgatttggcaaaacgtgaca 48489241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 369 - 481
Target Start/End: Complemental strand, 4539032 - 4538920
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccg 468  Q
    ||||||||||||||||||||||||||||||||||||||||  ||| |  ||| |||||||||| |||||||||| || ||||| ||||||||| ||| ||    
T  4539032 aatcgtgacacgattttgggaaaacgtgacacgattttcggtttgctaagcaagttttcaggacaaggttggtcgtaccttggatcgtacgcaccaaacg 4538933  T
Q  469 tgtcacgatttgg 481  Q
    |||||||||||||    
T  4538932 tgtcacgatttgg 4538920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 4585842 - 4585973
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||||||| ||||||||||||||||||| |||||| | |||||| || | |||||||  |||||||||||| || |||||||||||||||     
T  4585842 gtgtccaatcgtgacactattttgggaaaacgtgacaagatttttggcttgttgggtaagttttcaatataaggttggtcgtaccttgggtcgtacgcac 4585941  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| | |||||||||||||||||  |||||||    
T  4585942 caaacatgtcacgatttgggaaaatgtgacac 4585973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 26416994 - 26417125
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||| |||||||||||||||| ||| |||||||||||||    ||||| | || ||||||||| ||||||||||| || |||||||||||||||     
T  26416994 gtgtccaattgtgacacgattttggggaaatgtgacacgatttttagtttgttggacaagttttcagggtaaggttggtcgtaccttgggtcgtacgcac 26417093  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||||||||  |||||||||||    
T  26417094 caaccgtgtcacgatttggccaatcgtgacac 26417125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 368 - 485
Target Start/End: Original strand, 4178460 - 4178578
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||| |||| | |||||||||||||||||||| || ||||| |||||||||||||     
T  4178460 caatcgtgacacgattttgggaaatcgtgacacgatttttggcttgttaggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaat 4178559  T
Q  467 cgtgtcacgatttgggaaa 485  Q
    |||| || |||| ||||||    
T  4178560 cgtggcaagattggggaaa 4178578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 368 - 494
Target Start/End: Complemental strand, 32358536 - 32358410
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||||| ||||||||||||||||||||||| ||||||  |||| | |||||||||||||||||| |||| || || ||||| ||||||||| ||| |    
T  32358536 caatcgtgatacgattttgggaaaacgtgacacaattttcagcttgctgggcacgttttcaggataaagttgatcgtaccttggatcgtacgcaccaaac 32358437  T
Q  468 gtgtcacgatttgggaaatcgtgacac 494  Q
    |||||| ||||||| |||| |||||||    
T  32358436 gtgtcatgatttggaaaattgtgacac 32358410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 393 - 493
Target Start/End: Original strand, 48491289 - 48491389
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgac 492  Q
    |||||||||||||||| |||||| |||||| ||||| ||| ||||||||| || ||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  48491289 cgtgacacgattttcggcttgttgggcacgctttcaagattaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttggcaaaacgtgac 48491388  T
Q  493 a 493  Q
    |    
T  48491389 a 48491389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 380 - 494
Target Start/End: Complemental strand, 21983746 - 21983632
Alignment:
Q  380 gattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatt 478  Q
    ||||||| |||||||||||||||||||| | |||||| || ||||||||||||||||||||||| || ||||||||||||||| |||  |||||||||||    
T  21983746 gattttgtgaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaattgtgtcacgatt 21983647  T
Q  479 tgggaaatcgtgacac 494  Q
    | ||||| ||||||||    
T  21983646 t-ggaaaacgtgacac 21983632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 367 - 461
Target Start/End: Original strand, 4796250 - 4796344
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgca 461  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||  ||||||| || ||||| |||||||||    
T  4796250 tcaatcgtgacacgattttggaaaaacgtgacacgattttcaacttgatgggcacgttttcaggatagagttggtcgtaccttggatcgtacgca 4796344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 494
Target Start/End: Complemental strand, 2761759 - 2761658
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgac 492  Q
    |||||||||||||||  |||| | |||| |||||||||||||| |||||| || ||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  2761759 cgtgacacgattttcagcttgctgggcaagttttcaggataagattggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgac 2761660  T
Q  493 ac 494  Q
    ||    
T  2761659 ac 2761658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 363 - 485
Target Start/End: Original strand, 19495650 - 19495774
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttc-gacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgc 460  Q
    |||| |||||||||||| |||||||||||||||| |||||||||  | |||| | |||| | |||||||||||||||||||| || ||||||||||||||    
T  19495650 gtgtccaatcgtgacacaattttgggaaaacgtgccacgattttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgc 19495749  T
Q  461 atcaaccgtgtcacgatttgggaaa 485  Q
    ||||| |||| |||||| |||||||    
T  19495750 atcaatcgtgacacgatctgggaaa 19495774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 494
Target Start/End: Original strand, 46515915 - 46516016
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgac 492  Q
    |||| ||||||||| | |||||| ||||||||||||||||||||||||||| | ||||||||||| ||| ||| | ||||||||||||| ||| ||||||    
T  46515915 cgtgtcacgatttttggcttgttgggcacgttttcaggataaggttggtcacaccttgggtcgtatgcaccaagcatgtcacgatttggcaaaacgtgac 46516014  T
Q  493 ac 494  Q
    ||    
T  46516015 ac 46516016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 368 - 486
Target Start/End: Complemental strand, 21989422 - 21989304
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||||| |||||||||| |||| ||||||||||||||| | |||| | || |||||||||||||||||||| || || |||||||| |||||| |||     
T  21989422 caatcgtggcacgattttgtgaaa-cgtgacacgattttccaacttgatgggtacgttttcaggataaggttgatcgtaccttgggtcatacgcagcaat 21989324  T
Q  467 cgtgtcacgatttgggaaat 486  Q
    ||||||| ||||||| ||||    
T  21989323 cgtgtcatgatttggaaaat 21989304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 367 - 480
Target Start/End: Complemental strand, 49092208 - 49092093
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcg-acttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatca 464  Q
    ||||||||| |||||||||||||||| ||||||||||||||| ||||| | || ||| |||||||||||||||||||| || ||||| ||||| ||| ||    
T  49092208 tcaatcgtgtcacgattttgggaaaatgtgacacgattttcgaacttgctgggtacgtttttcaggataaggttggtcgtaccttggatcgtatgcacca 49092109  T
Q  465 accgtgtcacgatttg 480  Q
    |  ||| |||||||||    
T  49092108 atagtgacacgatttg 49092093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 494
Target Start/End: Original strand, 1113367 - 1113468
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgac 492  Q
    |||||||||||||||| | || | ||||  |||||||||||||||||||| || ||||||||||||||| ||| |||||||||  |||| ||| ||||||    
T  1113367 cgtgacacgattttcggcctgatgggcaaattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgtattggcaaaacgtgac 1113466  T
Q  493 ac 494  Q
    ||    
T  1113467 ac 1113468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 369 - 465
Target Start/End: Complemental strand, 2479850 - 2479753
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||| |||||||||| |||| ||| ||||||||||| | |||||| |  | ||||||||||||||||||||| || |||||||||||||||||||    
T  2479850 aatcgtgtcacgattttgtgaaatcgttacacgattttcaaacttgttggttaagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaa 2479753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 29608215 - 29608295
Alignment:
Q  363 gtgttcaatcgtgacacgatttt-gggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtc 442  Q
    |||| |||||||||||||||||| ||| ||| |||| || |||||||||||||| |||| |||||||||||||||||||||    
T  29608215 gtgtccaatcgtgacacgatttttggggaaaagtgatacaattttcgacttgttgggcaagttttcaggataaggttggtc 29608295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 30026482 - 30026391
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacg 459  Q
    |||||||||||| ||||||||| ||||||||||||||||||  ||||   |||||| ||||||||||||||||||| || |||| ||||||||    
T  30026482 tcaatcgtgacatgattttggggaaacgtgacacgattttcagcttgccgggcacg-tttcaggataaggttggtcgtaccttgagtcgtacg 30026391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 479
Target Start/End: Complemental strand, 496461 - 496365
Alignment:
Q  383 tttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgattt 479  Q
    |||||||||||||| |||| |||| | | || | | ||| ||||||||||||||||||   || |||| ||||||||||||||||||||||||||||    
T  496461 tttgggaaaacgtgtcacggtttttggcatgcttgacacattttcaggataaggttggatttaccttgagtcgtacgcatcaaccgtgtcacgattt 496365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 481
Target Start/End: Original strand, 44847762 - 44847821
Alignment:
Q  422 gttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgg 481  Q
    ||||||||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||    
T  44847762 gttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgatttgg 44847821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 481
Target Start/End: Complemental strand, 79969 - 79791
Alignment:
Q  302 atcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacg 401  Q
    |||||||||||||||   || |||| ||||||||  ||||||||||||||||||  |  | ||| ||||||||| ||||||||||| |||| |||||| |    
T  79969 atcgtgacacgatttcattaacgtgtcacgatttc-caggcagtgagcatggtt--tgcaggtgctcaatcgtgtcacgattttggaaaaatgtgacaag 79873  T
Q  402 attttc-gacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgg 481  Q
    ||||||  ||||| | || ||| |||||||||||||||||||| ||  ||||||| || ||| ||| |  ||||||||||||    
T  79872 attttcaaacttgctgggtacgtttttcaggataaggttggtcgtacattgggtcatatgcaccaatcacgtcacgatttgg 79791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 423 - 485
Target Start/End: Complemental strand, 24515187 - 24515125
Alignment:
Q  423 ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||||||||| || ||||| ||||||||||||| |||| ||||||| ||||||    
T  24515187 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaa 24515125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 481
Target Start/End: Complemental strand, 47264157 - 47264044
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||| ||| ||| || |||| ||||||||||||||| | |||| | |  | ||||||||||||||||||||| || ||||||||||||| ||||| |    
T  47264157 aatcgtggcacaattgtgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatc 47264058  T
Q  468 gtgtcacgatttgg 481  Q
     || ||||||||||    
T  47264057 ttgacacgatttgg 47264044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 407
Target Start/End: Complemental strand, 25767436 - 25767398
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttc 407  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  25767436 aatcgtgacacgattttgggaaatcgtgacacgattttc 25767398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 31733420 - 31733358
Alignment:
Q  380 gattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtc 442  Q
    |||||| || ||||||||||| ||||||| |||| | |||| |||||||||||||||||||||    
T  31733420 gattttagggaaacgtgacacaattttcggcttgctgggcaagttttcaggataaggttggtc 31733358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 413
Target Start/End: Complemental strand, 48599978 - 48599933
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttg 413  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||||    
T  48599978 caatcgtgacacgattatggggaaacgtgacacgattttcggcttg 48599933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 478
Target Start/End: Original strand, 35853654 - 35853709
Alignment:
Q  423 ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatt 478  Q
    ||||||||||||||| |||| || ||||| ||||||||||||| |||| |||||||    
T  35853654 ttttcaggataaggtcggtcgtaccttggatcgtacgcatcaatcgtggcacgatt 35853709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 442
Target Start/End: Complemental strand, 2361639 - 2361565
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacga-ttttcgacttgttcggcacgttttcaggataaggttggtc 442  Q
    |||||||||||||||||||| ||||||||||| | ||||||| ||| | | ||  |||| |||||||||||||||    
T  2361639 aatcgtgacacgattttggggaaacgtgacacaatttttcgatttgctggacaaatttttaggataaggttggtc 2361565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 494
Target Start/End: Complemental strand, 3050569 - 3050499
Alignment:
Q  424 tttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||| ||||||  |||||| || ||||||||||||||||||| |||| ||  |||||| ||||||||||||    
T  3050569 tttctggataatattggtcgtaccttgggtcgtacgcatcaatcgtgacatcatttggaaaatcgtgacac 3050499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 7e-41; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 369 - 494
Target Start/End: Original strand, 24435555 - 24435680
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccg 468  Q
    ||||||| || |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| || ||||||| ||||||| ||||||    
T  24435555 aatcgtgtcatgattttgggaaaacgtgacacgattttcaacttgtttggcacgttttcaggataaggttggtcgtaccttgggttgtacgcaccaaccg 24435654  T
Q  469 tgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||  |||||||||||    
T  24435655 tgtcacgatttggccaatcgtgacac 24435680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 363 - 479
Target Start/End: Complemental strand, 9183497 - 9183381
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||||||||||||||| || ||||||||||||||||    
T  9183497 gtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttgacttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcat 9183398  T
Q  463 caaccgtgtcacgattt 479  Q
    ||| |||| ||||||||    
T  9183397 caatcgtgacacgattt 9183381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 21272566 - 21272697
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||| || |||| ||||||||| ||| |||| ||||||||||||||||||||||||||||| ||||| |||||||||     
T  21272566 gtgtccaatcgtgacacgattttgggtaatcgtgtcacgatttttgacatgtttggcacgttttcaggataaggttggtcataccttggatcgtacgcac 21272665  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||| |||||||  |||||||||||    
T  21272666 caaccgtgtcaagatttggccaatcgtgacac 21272697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 21593129 - 21593260
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||||||| |||||||||||||||||||||||||||| |||| | |||| ||||| ||||||||||||||| || |||||||||| || |     
T  21593129 gtgtccaatcgtgacacaattttgggaaaacgtgacacgattttcggcttgctgggcatgtttttaggataaggttggtcgtaccttgggtcgttcgtac 21593228  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||||||||||||  |||||||    
T  21593229 caaccgtgtcacgatttgggaaaatgtgacac 21593260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 372 - 493
Target Start/End: Original strand, 26661421 - 26661542
Alignment:
Q  372 cgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgt 471  Q
    ||||||||||||||||||||| |||||| ||||||||||||| | | | |||||||||||||||||||||| || ||||||||||||||| ||||  |||    
T  26661421 cgtgacacgattttgggaaaatgtgacaagattttcgacttgctggactcgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaacattgt 26661520  T
Q  472 cacgatttgggaaatcgtgaca 493  Q
    |||||||||||||| |||||||    
T  26661521 cacgatttgggaaaacgtgaca 26661542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 372 - 493
Target Start/End: Original strand, 26767392 - 26767513
Alignment:
Q  372 cgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgt 471  Q
    ||||||||||||||||||||| |||||| ||||||||||||| | | | |||||||||||||||||||||| || ||||||||||||||| ||||  |||    
T  26767392 cgtgacacgattttgggaaaatgtgacaagattttcgacttgctggactcgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaacattgt 26767491  T
Q  472 cacgatttgggaaatcgtgaca 493  Q
    |||||||||||||| |||||||    
T  26767492 cacgatttgggaaaacgtgaca 26767513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 338 - 494
Target Start/End: Complemental strand, 31980062 - 31979906
Alignment:
Q  338 caggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggt 437  Q
    ||||||||||||||||||  |    ||| ||||||||| ||||||||||| |||||||||||| |||||| ||||| | |||||||||||||||||||||    
T  31980062 caggcagtgagcatggtttttcagggtgatcaatcgtgtcacgattttggaaaaacgtgacacaattttcaacttgctgggcacgttttcaggataaggt 31979963  T
Q  438 tggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||| ||  ||| |||||||||| ||| |||||||||||||||  || ||||||||    
T  31979962 tggtcgtactttgagtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacac 31979906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 364 - 475
Target Start/End: Complemental strand, 603723 - 603612
Alignment:
Q  364 tgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatc 463  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||| | |||| |||||||||||||||||| || || ||||| ||||||||| |    
T  603723 tgttcaatcgtgacacgattttgggaaaacgtgacatgattttcggcttgctgggcaagttttcaggataaggttgatcgtatcttggatcgtacgcacc 603624  T
Q  464 aaccgtgtcacg 475  Q
    || |||||||||    
T  603623 aaacgtgtcacg 603612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 22964218 - 22964087
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | |||| | | || ||||||||||||||||||||| || ||||  ||||||||      
T  22964218 gtgttcaatcgtgatacgattttgggaaaacgtgacacgatttttggcttgctggacaagttttcaggataaggttggtcgtaccttgtatcgtacgcgc 22964119  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| |||||||| |||||||||| ||||||||    
T  22964118 caaacgtgtcacaatttgggaaaacgtgacac 22964087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 23824175 - 23824306
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | |||| | | || ||||||||||||||||||||| || ||||  ||||||||      
T  23824175 gtgttcaatcgtgatacgattttgggaaaacgtgacacgatttttggcttgctggacaagttttcaggataaggttggtcgtaccttgtatcgtacgcgc 23824274  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| |||||||| |||||||||| ||||||||    
T  23824275 caaacgtgtcacaatttgggaaaacgtgacac 23824306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 368 - 491
Target Start/End: Complemental strand, 3809406 - 3809286
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||   || | ||||||||||||||||||||| || ||||||||||||| | |||      
T  3809406 caatcgtgacacgattttggggaaacgtgacacgattttcggcttg---ggaaagttttcaggataaggttggtcgtaccttgggtcgtacgtaccaaat 3809310  T
Q  468 gtgtcacgatttgggaaatcgtga 491  Q
    |||||| |||||||||||||||||    
T  3809309 gtgtcatgatttgggaaatcgtga 3809286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 367 - 479
Target Start/End: Original strand, 5571845 - 5571957
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||| | |||||||||| ||| ||||||||||| || ||||||||||||||| |||     
T  5571845 tcaatcgtgtcacgattttgagaaaacgtgacacgattttcaacttgctgggcacgtttttaggttaaggttggtcgtaccttgggtcgtacgcaccaat 5571944  T
Q  467 cgtgtcacgattt 479  Q
    |||| ||||||||    
T  5571945 cgtgacacgattt 5571957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 367 - 494
Target Start/End: Complemental strand, 18234600 - 18234472
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||||| || |||||||||||||||||| ||||||||| | |||| | || ||||||||||||||||||||||| || ||||||||||||||| |||    
T  18234600 tcaatcgtgtcaggattttgggaaaacgtgatacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaa 18234501  T
Q  466 ccgtgtcacgatttgggaaatcgtgacac 494  Q
     |||||||||||||||  || ||||||||    
T  18234500 tcgtgtcacgatttggacaaacgtgacac 18234472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 31086052 - 31086168
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgtttt-caggataaggttggtcatagcttgggtcgtacgcatca 464  Q
    ||||||||| ||||||||||| ||||||||||||||||||| | |||| | || ||||||| |||||||||||||||| || ||||||||||||||| ||    
T  31086052 tcaatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgctaggtacgtttttcaggataaggttggtcgtaccttgggtcgtacgcacca 31086151  T
Q  465 accgtgtcacgatttgg 481  Q
    | |||||||||||||||    
T  31086152 atcgtgtcacgatttgg 31086168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 368 - 494
Target Start/End: Original strand, 10076773 - 10076899
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||| ||| |||||||||||||||||||| ||||||||  ||||| |    ||||||||||||||||||||||| || ||||||||||||||| ||| |    
T  10076773 caatcatgatacgattttgggaaaacgtgatacgatttttaacttgctgattacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 10076872  T
Q  468 gtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||||  || ||||||||    
T  10076873 gtgtcacgatttggacaaacgtgacac 10076899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 367 - 480
Target Start/End: Original strand, 5017075 - 5017190
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgtttt-caggataaggttggtcatagcttgggtcgtacgcatca 464  Q
    ||||||||| |||||||||| |||||||||||||||||||| | |||  | || || |||| |||||||||||||||| || ||||||||||||||| ||    
T  5017075 tcaatcgtgtcacgattttgagaaaacgtgacacgattttcaaacttactgggtacatttttcaggataaggttggtcgtaccttgggtcgtacgcacca 5017174  T
Q  465 accgtgtcacgatttg 480  Q
    | ||||||||||||||    
T  5017175 atcgtgtcacgatttg 5017190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 485
Target Start/End: Complemental strand, 5411721 - 5411598
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgca 461  Q
    |||| |||||||||||||||||||| ||| ||||||||  |||| | |||| | |||| | |||||| ||||||||||||| || |||||||||||||||    
T  5411721 gtgtccaatcgtgacacgattttggaaaatcgtgacacattttttggcttgctgggcaagattttcaagataaggttggtcgtaccttgggtcgtacgca 5411622  T
Q  462 tcaaccgtgtcacgatttgggaaa 485  Q
    |||| |||| ||||||| ||||||    
T  5411621 tcaatcgtggcacgattggggaaa 5411598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 389 - 479
Target Start/End: Complemental strand, 26954764 - 26954674
Alignment:
Q  389 aaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgattt 479  Q
    |||||||| ||||||||| | | || | | ||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  26954764 aaaacgtgtcacgatttttggcatgcttgacacattttcaggataaggttggtcgtaccttgggtcgtacgcatcaaccgtgtcacgattt 26954674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 369 - 494
Target Start/End: Complemental strand, 24714885 - 24714761
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccg 468  Q
    ||||||| |||||||| || ||||||||||||||||||| ||||| | ||||||||||||||||||| |||||| ||   |||||| ||||   ||||||    
T  24714885 aatcgtgccacgattt-ggaaaaacgtgacacgattttcaacttgctgggcacgttttcaggataagattggtcgtactgtgggtcatacgatccaaccg 24714787  T
Q  469 tgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||| |||  |||||||||||    
T  24714786 tgtcacgatatggccaatcgtgacac 24714761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 363 - 478
Target Start/End: Complemental strand, 5407396 - 5407280
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgca 461  Q
    |||| |||||||||||||||||||| ||| ||||||||  |||| | |||| | |||| | |||||| ||||||||||||| || |||||||||||||||    
T  5407396 gtgtccaatcgtgacacgattttggaaaatcgtgacacattttttggcttgctgggcaagattttcaagataaggttggtcgtaccttgggtcgtacgca 5407297  T
Q  462 tcaaccgtgtcacgatt 478  Q
    |||| |||| |||||||    
T  5407296 tcaatcgtgacacgatt 5407280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 5413906 - 5413813
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||| | |||| | |||| | |||||||||||||||||||| || ||||||||||||||||||| |||| ||||||| ||||||    
T  5413906 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaa 5413813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 480
Target Start/End: Complemental strand, 33211671 - 33211555
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||| |||||||||||| |||||||| || |||||| | |||||| |||||||||| |||||| ||||  || ||  ||||||||||||||     
T  33211671 gtgtccaatcgtaacacgattttggaaaaacgtgtcatgattttgg-cttgttgggcacgtttttaggatatggtttatcgtactttgggtcgtacgcac 33211573  T
Q  463 caaccgtgtcacgatttg 480  Q
    ||||| ||||||||||||    
T  33211572 caaccatgtcacgatttg 33211555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 423 - 485
Target Start/End: Complemental strand, 16452867 - 16452805
Alignment:
Q  423 ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||| ||||||| ||||||    
T  16452867 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaa 16452805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 5406656 - 5406563
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||| | |||| | |||| | |||| ||||||||||||||| || ||||||||||||||||||| |||| ||||||| ||||||    
T  5406656 cgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaa 5406563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 5410981 - 5410888
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||| | |||| | |||| | |||| ||||||||||||||| || ||||||||||||||||||| |||| ||||||| ||||||    
T  5410981 cgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaa 5410888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 30834995 - 30834902
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||| | |||| | |||| | |||||||||||||||||||| || ||||| ||||||||||||| |||| ||||||| ||||||    
T  30834995 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaa 30834902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 439
Target Start/End: Original strand, 17759427 - 17759494
Alignment:
Q  372 cgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttg 439  Q
    ||||||||||||||||| ||||||||||| ||||||| |||| | | || ||||||||||||||||||    
T  17759427 cgtgacacgattttggggaaacgtgacacaattttcggcttgctggacaagttttcaggataaggttg 17759494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 423 - 485
Target Start/End: Complemental strand, 16452756 - 16452694
Alignment:
Q  423 ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||||||||| || ||||||||||||||||||| | || ||||||| ||||||    
T  16452756 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcatggcacgattggggaaa 16452694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 478
Target Start/End: Complemental strand, 33160812 - 33160726
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatt 478  Q
    |||||||||||||| | |||| | |||| | |||||||||||||||||||| ||  |||||||||||||||||| |||| |||||||    
T  33160812 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtacattgggtcgtacgcatcaatcgtgacacgatt 33160726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 5757061 - 5757174
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||||||  ||||||||| |||| ||||||||||||||| | |||| | |  | ||||||||||||||||||||| || ||| ||||||| | ||||| |    
T  5757061 aatcgtggtacgattttgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtacctttggtcgtatgtatcaatc 5757160  T
Q  468 gtgtcacgatttgg 481  Q
    ||| ||||||||||    
T  5757161 gtggcacgatttgg 5757174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 485
Target Start/End: Complemental strand, 31405100 - 31405039
Alignment:
Q  424 tttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    ||||||||||||||||||| || ||| ||||||||||||||| |||| ||||||| ||||||    
T  31405100 tttcaggataaggttggtcgtaccttaggtcgtacgcatcaatcgtggcacgattggggaaa 31405039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 369 - 479
Target Start/End: Complemental strand, 23896847 - 23896736
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||||||  ||||||||| |||| ||||||||||||||  | |||| | |  | ||||||||||||||||||||| || ||| ||||||||| ||||| |    
T  23896847 aatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagttttcaggataaggttggtcgtaccttcggtcgtacgtatcaatc 23896748  T
Q  468 gtgtcacgattt 479  Q
    ||| ||||||||    
T  23896747 gtggcacgattt 23896736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 407
Target Start/End: Complemental strand, 22709535 - 22709497
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttc 407  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  22709535 aatcgtgacacgatcttgggaaatcgtgacacgattttc 22709497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 3e-40; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 338 - 493
Target Start/End: Complemental strand, 37070313 - 37070157
Alignment:
Q  338 caggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataagg 436  Q
    ||||||| |||||||||| ||  | ||| ||||||||| ||||||||||||||||||||||||||||||| | |||||| || |||||||||||||||||    
T  37070313 caggcagggagcatggtttctcaaggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataagg 37070214  T
Q  437 ttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgaca 493  Q
    |||||| || ||||||||||||||| ||| |||| |||||||||| |||||||||||    
T  37070213 ttggtcgtaccttgggtcgtacgcaccaatcgtgccacgatttggaaaatcgtgaca 37070157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 368 - 494
Target Start/End: Complemental strand, 4553130 - 4553004
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||||||||||||||| |||||||||| | ||||||||||||||| | |||||||||||||||||||| ||| || | || ||||||||||||||||    
T  4553130 caatcgtgacacgattttgagaaaacgtgatatgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcgtgagtcgtacgcatcaacc 4553031  T
Q  468 gtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||| ||| ||||||||    
T  4553030 gtgtcacgatttggcaaaacgtgacac 4553004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 368 - 494
Target Start/End: Original strand, 49918035 - 49918161
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||||||||||||||||| | ||||||||||||||||||  ||||| | ||||||||||||||||||||||||||||| |||||||||||| || ||| |    
T  49918035 caatcgtgacacgattttcgaaaaacgtgacacgatttttaacttgctgggcacgttttcaggataaggttggtcataccttgggtcgtacacaccaatc 49918134  T
Q  468 gtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||||||||  |||||||    
T  49918135 gtgtcacgatttgggaaaatgtgacac 49918161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 37033774 - 37033643
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| |||||||||||||||||| || |||| |||||||||||||| ||||   |||| ||||||||||||||||||||  || |||||||||||||||     
T  37033774 gtgtccaatcgtgacacgattttcgggaaacatgacacgattttcgccttgcagggcaagttttcaggataaggttggttgtaccttgggtcgtacgcac 37033675  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| ||||||||||||||||||||||||||||    
T  37033674 caaacgtgtcacgatttgggaaatcgtgacac 37033643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 368 - 494
Target Start/End: Original strand, 10924909 - 10925035
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||| | |||| |||||||  |||| |||||||||| |||||||| ||||||||||||    
T  10924909 caatcgtgacacgattttggaaaaatgtgacacgattttcggcttggtaggcaagttttcaaaataaagttggtcataccttgggtcatacgcatcaacc 10925008  T
Q  468 gtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||| ||| ||||||||    
T  10925009 gtgtcacgatttggcaaaacgtgacac 10925035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 363 - 490
Target Start/End: Original strand, 44454840 - 44454967
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||| | |||| ||||||| ||||||||||||  || |||||||||||||||     
T  44454840 gtgtccaatcgtgacacgattttggggaaacgtgacacgattttcggcttgctgggcaagttttcaagataaggttggttgtaccttgggtcgtacgcac 44454939  T
Q  463 caaccgtgtcacgatttgggaaatcgtg 490  Q
     || ||||||||||||||| ||| ||||    
T  44454940 taaacgtgtcacgatttggcaaaacgtg 44454967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 369 - 479
Target Start/End: Original strand, 11348188 - 11348298
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccg 468  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||| |||| ||||||||||||||||||||| ||  |||| ||||||||| ||| ||    
T  11348188 aatcgtgacacgattttggagaaacgtgacacgattttcggcttgttgggcaagttttcaggataaggttggtcgtacattggatcgtacgcaccaaacg 11348287  T
Q  469 tgtcacgattt 479  Q
    |||||||||||    
T  11348288 tgtcacgattt 11348298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 193075 - 193206
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||| |||||| ||||||| ||||||||| || ||||||| |||| | |||| ||||| |||||||| |||||| || |||||||||||||||     
T  193075 gtgtccaatcatgacacaattttggaaaaacgtgataccattttcggcttgctgggcaagtttttaggataagattggtcgtaccttgggtcgtacgcac 193174  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| |||||| |||||||||||||||||||||    
T  193175 caaacgtgtcgcgatttgggaaatcgtgacac 193206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 368 - 485
Target Start/End: Original strand, 3206671 - 3206790
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtc-atagcttgggtcgtacgcatcaa 465  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| | |||| | |||| |||||||||||||||  || |||||||||||||||||||    
T  3206671 caatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaa 3206770  T
Q  466 ccgtgtcacgatttgggaaa 485  Q
     |||| ||| ||||||||||    
T  3206771 tcgtgacacaatttgggaaa 3206790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 368 - 494
Target Start/End: Complemental strand, 28220709 - 28220582
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgactt-gttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |  || || || || | ||||||||||||| || |||||||||||||||  ||     
T  28220709 caatcgtgacacgattttgggaaaacgtgacacgattttcggctttgcacgacaagtatttaagataaggttggtcgtaccttgggtcgtacgcacaaaa 28220610  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||||||||||||||||| ||||||||    
T  28220609 cgtgtcacgatttgggaaaacgtgacac 28220582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 367 - 480
Target Start/End: Complemental strand, 3282223 - 3282109
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||||| |||||||||| |||||||||||||||||||| | |||| | || ||||||||| |||||||||||||||| ||||||||||||||| |||    
T  3282223 tcaatcgtgtcacgattttgagaaaacgtgacacgattttcaaacttgctgggtacgttttcaagataaggttggtcataccttgggtcgtacgcaccaa 3282124  T
Q  466 ccgtgtcacgatttg 480  Q
     |||| |||||||||    
T  3282123 tcgtgccacgatttg 3282109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 368 - 494
Target Start/End: Original strand, 31658924 - 31659050
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||||||||||||||||||||||||||||| |||||   |||| | || | ||||||||||||||||||||  || ||||||||||||||| ||| |    
T  31658924 caatcgtgacacgattttgggaaaacgtgacacaattttttgcttgctgggaaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaac 31659023  T
Q  468 gtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||| |||  |||||||    
T  31659024 gtgtcacgatttggtaaaatgtgacac 31659050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 366 - 494
Target Start/End: Complemental strand, 13598918 - 13598789
Alignment:
Q  366 ttcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatca 464  Q
    |||||||||| || ||||||||||||| |||||||||||||| | |||| | || ||||||||||||||||||||||| || ||||||||||||||| ||    
T  13598918 ttcaatcgtgtcatgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcacca 13598819  T
Q  465 accgtgtcacgatttgggaaatcgtgacac 494  Q
    | |||||||| ||||||  || ||||||||    
T  13598818 atcgtgtcacaatttggacaaacgtgacac 13598789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 368 - 481
Target Start/End: Original strand, 3189036 - 3189151
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtc-atagcttgggtcgtacgcatcaa 465  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| | |||| | |||| |||||||||||||||  || |||||||||||||||||||    
T  3189036 caatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaa 3189135  T
Q  466 ccgtgtcacgatttgg 481  Q
     |||| ||| ||||||    
T  3189136 tcgtgacacaatttgg 3189151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 368 - 481
Target Start/End: Original strand, 3197853 - 3197968
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtc-atagcttgggtcgtacgcatcaa 465  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| | |||| | |||| |||||||||||||||  || |||||||||||||||||||    
T  3197853 caatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaa 3197952  T
Q  466 ccgtgtcacgatttgg 481  Q
     |||| ||| ||||||    
T  3197953 tcgtgacacaatttgg 3197968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 16455331 - 16455458
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||||||| ||||||||| | || ||||||| |||||| |   |||| ||||||||||||||||||| ||| || || ||||||||||||||||||||    
T  16455331 tcaatcgtgatacgattttgagcaatcgtgacatgatttttggtatgtttggcacgttttcaggataagtttgctcgtaccttgggtcgtacgcatcaac 16455430  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    |||| ||||||||||  |||||||||||    
T  16455431 cgtgacacgatttggccaatcgtgacac 16455458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 368 - 494
Target Start/End: Complemental strand, 28223904 - 28223777
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgac-ttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||  || || || || | ||||||||||||| || |||||||||||||||  ||     
T  28223904 caatcgtgacacgattttgggaaaacgtgacacgattttcggctttgcacgacaagtatttaagataaggttggtcgtaccttgggtcgtacgcacaaaa 28223805  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||| |||||||||| ||||||||    
T  28223804 cgtgtcacaatttgggaaaacgtgacac 28223777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 368 - 485
Target Start/End: Original strand, 20762357 - 20762475
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||| |||| | |||||||||||||||||||| || ||| | ||| |||||||||     
T  20762357 caatcgtgacacgattttgggaaatcgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcgtacctttgatcgaacgcatcaat 20762456  T
Q  467 cgtgtcacgatttgggaaa 485  Q
    |||| ||||||| ||||||    
T  20762457 cgtggcacgattggggaaa 20762475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 368 - 494
Target Start/End: Original strand, 1833207 - 1833334
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgtttt-caggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    |||| ||||||||||||||||||||| | |||||||||| | |||| |  | || |||| || |||||||||||||||| ||||||| ||||||| |||     
T  1833207 caatggtgacacgattttgggaaaacataacacgatttttggcttgctgagtacatttttcaagataaggttggtcataccttgggttgtacgcaccaaa 1833306  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||||||||| |||| ||||||||    
T  1833307 cgtgtcacgatttgcgaaaacgtgacac 1833334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 394 - 479
Target Start/End: Original strand, 29135762 - 29135847
Alignment:
Q  394 gtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgattt 479  Q
    |||||| |||||||  |||| | |||||||||||||||||||||||||| || ||||||||||||||| ||| |||||||||||||    
T  29135762 gtgacatgattttcagcttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 29135847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 13547763 - 13547672
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||| ||||||  |||| | ||||||||||||  |||||||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  13547763 cgtgacacaattttcagcttgctgggcacgttttcaa-ataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttgggaaa 13547672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 13549674 - 13549583
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||| ||||||  |||| | ||||||||||||  |||||||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  13549674 cgtgacacaattttcagcttgctgggcacgttttcaa-ataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttgggaaa 13549583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 367 - 479
Target Start/End: Complemental strand, 37879592 - 37879480
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||||||||||||||| |||| ||||||||||||||  |||  | | || ||||| ||||||||||||||| || ||||||||| ||||| |||     
T  37879592 tcaatcgtgacacgattttggaaaaatgtgacacgattttcagcttactggacaagtttttaggataaggttggtcgtaccttgggtcgcacgcaccaaa 37879493  T
Q  467 cgtgtcacgattt 479  Q
    | |||||||||||    
T  37879492 catgtcacgattt 37879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 13604205 - 13604318
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||||||||||||||||| | || ||||||| ||||||| | |||| | |  | ||||||||||||||||||||| || ||||||||||||| ||||| |    
T  13604205 aatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatc 13604304  T
Q  468 gtgtcacgatttgg 481  Q
    ||| ||||||||||    
T  13604305 gtgacacgatttgg 13604318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 494
Target Start/End: Complemental strand, 30476905 - 30476804
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgac 492  Q
    ||||||||||||||||  ||| | |||| ||||||| ||||||||||||   | |||||||||||| || ||| ||||||||||||||||||| ||||||    
T  30476905 cgtgacacgattttcggtttgctgggcaagttttcaagataaggttggttgaaccttgggtcgtacacaccaaacgtgtcacgatttgggaaaacgtgac 30476806  T
Q  493 ac 494  Q
    ||    
T  30476805 ac 30476804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 393 - 481
Target Start/End: Original strand, 46064629 - 46064717
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgg 481  Q
    |||||||||||||| | | || | ||||| |||||||||||| ||||||| || ||||||||||||| |||||||||| ||||||||||    
T  46064629 cgtgacacgatttttggcatgcttggcacattttcaggataaagttggtcgtaccttgggtcgtacgtatcaaccgtgacacgatttgg 46064717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 26644483 - 26644593
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttc-gacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||| || || ||||||| ||||||| |||| ||   ||||||||||||| ||| |    
T  26644483 aatcgtggcacgattttgtgaaaacgtgacacgattttcaaacttgttgggtaccttttcagaataaggtcggtcgta---tgggtcgtacgcaccaatc 26644579  T
Q  468 gtgtcacgatttgg 481  Q
    ||| ||||||||||    
T  26644580 gtggcacgatttgg 26644593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 369 - 451
Target Start/End: Original strand, 3156554 - 3156636
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgg 451  Q
    ||||||||||||||||||||||||| | |||||||||| |  ||| | | |||||||||||||||||||||||| || |||||    
T  3156554 aatcgtgacacgattttgggaaaacataacacgatttttggtttgctggacacgttttcaggataaggttggtcgtaccttgg 3156636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 453
Target Start/End: Original strand, 16124245 - 16124327
Alignment:
Q  372 cgtgacacgattttgggaaaacgtgacacgattttc-gacttgttcggcacgttttcaggataaggttggtcatagcttgggt 453  Q
    |||| ||||||||| |||||||||||||||||||||  |||| || || ||||||||||||||||||||||| || |||||||    
T  16124245 cgtgtcacgattttcggaaaacgtgacacgattttcaaactttttgggtacgttttcaggataaggttggtcgtaccttgggt 16124327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 29652332 - 29652215
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaa-cgtgacacgattttcgactt-gttcggcacgtttt-caggataaggttggtcatagcttgggtcgtacgcatc 463  Q
    ||||||||| ||||||||||| |||| ||| | ||||||||| | || ||| || ||||||| |||||||||||||||| || |||||||||||| || |    
T  29652332 tcaatcgtgtcacgattttggaaaaaacgttatacgattttcaaatttgttgggtacgtttttcaggataaggttggtcgtaccttgggtcgtacacacc 29652233  T
Q  464 aaccgtgtcacgatttgg 481  Q
    || |||||||||||||||    
T  29652232 aatcgtgtcacgatttgg 29652215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 494
Target Start/End: Original strand, 21536175 - 21536278
Alignment:
Q  391 aacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgt 489  Q
    ||||||||||||||||| | |||| | || ||||||||||||| ||||||||| || ||||||||||||||| ||| |||| | |||||| ||||| |||    
T  21536175 aacgtgacacgattttcaaacttgctgggtacgttttcaggatgaggttggtcgtaccttgggtcgtacgcaccaatcgtgccccgattt-ggaaaacgt 21536273  T
Q  490 gacac 494  Q
    |||||    
T  21536274 gacac 21536278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 22819950 - 22819819
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    ||||||||| |||||| ||||||| ||||  |||||| ||||||   | |||| | ||||||||||| ||||| |||||| || ||||||||||||||||    
T  22819950 gtgttcaatggtgacatgattttgagaaactgtgacatgatttttcgcatgtttgacacgttttcagaataagtttggtcgtaccttgggtcgtacgcat 22819851  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    | |||||  ||| |||| |  |||||||||||    
T  22819850 cgaccgtaacacaattttgccaatcgtgacac 22819819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 46064552 - 46064642
Alignment:
Q  295 attcaggatcgtgacacgatttgtgtaccgtgccacgatttggc-aggcagtgagcatggttccttgatgtgttcaatcgtgacacgatttt 385  Q
    ||||||||| |||||||||||||||||||||| |||||||| || |||| ||||||||||||   ||| | |||||| ||||||||||||||    
T  46064552 attcaggattgtgacacgatttgtgtaccgtgtcacgatttcgcaaggccgtgagcatggttttatga-gcgttcaaccgtgacacgatttt 46064642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 13316776 - 13316683
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||| | |||| | |||| | |||||||||||||||||||| || ||||| ||||||||||||| |||| ||||| | ||||||    
T  13316776 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgagtggggaaa 13316683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 479
Target Start/End: Original strand, 15820048 - 15820104
Alignment:
Q  423 ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgattt 479  Q
    |||| ||||||||||||||| || ||||||||||||||||||||| |||| ||||||    
T  15820048 tttttaggataaggttggtcgtaccttgggtcgtacgcatcaaccatgtctcgattt 15820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 413
Target Start/End: Complemental strand, 13659786 - 13659737
Alignment:
Q  364 tgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttg 413  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||||| ||||    
T  13659786 tgttcaatcgtgatacgattttgggaaaatgtgtcacgattttcggcttg 13659737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 405
Target Start/End: Original strand, 9986895 - 9986931
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattt 405  Q
    ||||||||||||||||||||||| |||||||||||||    
T  9986895 aatcgtgacacgattttgggaaatcgtgacacgattt 9986931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 407
Target Start/End: Original strand, 19361022 - 19361060
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttc 407  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  19361022 aatcgtgacacgatcttgggaaatcgtgacacgattttc 19361060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 407
Target Start/End: Original strand, 19365878 - 19365916
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttc 407  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  19365878 aatcgtgacacgatcttgggaaatcgtgacacgattttc 19365916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 11021 - 11152
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||  ||| | |||| ||||||||||||||||||||| ||  ||||||||||||||     
T  11021 gtgtccaatcgtgacacgattttggggaaatgtgacacgattttcggtttgctgggcaagttttcaggataaggttggtcgtacattgggtcgtacgcac 11120  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| ||||||||||||||||||||||||||||    
T  11121 caaacgtgtcacgatttgggaaatcgtgacac 11152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 34389371 - 34389240
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgca 461  Q
    |||| |||||||||||||||||||||||||||||||||||||||| | |||| | || ||||||||||||||||||||||| || |||||||||||||||    
T  34389371 gtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgca 34389272  T
Q  462 tcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
     ||| ||||||||||||| ||||| ||||||||    
T  34389271 ccaatcgtgtcacgattt-ggaaaacgtgacac 34389240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 2837331 - 2837200
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  |||| | || | ||||||||||||||||||||| || |||||||||||||||     
T  2837331 gtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcaccttgctgggtaagttttcaggataaggttggtcgtaccttgggtcgtacgcac 2837232  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| ||||||| ||||||||||| ||| ||||    
T  2837231 caaacgtgtcatgatttgggaaaacgtaacac 2837200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 367 - 494
Target Start/End: Complemental strand, 20522738 - 20522611
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||| | |||||||||||||||||||||||||| || ||||||||||||||| |||     
T  20522738 tcaatcgtgtcacgattttgagaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaat 20522639  T
Q  467 cgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||||| ||||||  || ||||||||    
T  20522638 cgtgtcacaatttggacaaacgtgacac 20522611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 364 - 494
Target Start/End: Original strand, 14698587 - 14698717
Alignment:
Q  364 tgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatc 463  Q
    |||||| ||||  ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| || ||||||||||||||| |    
T  14698587 tgttcattcgtatcacgattttgggaaaacgtgacacgattttcaacttgttgggcacattttcaggataaggttggtcgtaccttgggtcgtacgcacc 14698686  T
Q  464 aaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||| | |||||||||||  || ||||||||    
T  14698687 aaccatttcacgatttggacaaacgtgacac 14698717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 338 - 494
Target Start/End: Complemental strand, 21630490 - 21630334
Alignment:
Q  338 caggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggt 437  Q
    ||||||||||||||||||  ||   ||| ||||||||| ||| ||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||    
T  21630490 caggcagtgagcatggttttttagggtgctcaatcgtgtcacaattttgggaaaacatgacacgattttcaacttgctgggcacgttttcaggataaggt 21630391  T
Q  438 tggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||||| ||  ||||||||||| || ||| |||||||||||||||  || ||||||||    
T  21630390 tggtcgtactttgggtcgtacacaccaatcgtgtcacgatttggacaaacgtgacac 21630334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 39483393 - 39483278
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||||| || ||||||||||||||||||||||| || |||||||| |||||| |||    
T  39483393 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcttacgcaccaa 39483294  T
Q  466 ccgtgtcacgatttgg 481  Q
     |||||||||||||||    
T  39483293 tcgtgtcacgatttgg 39483278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 302 - 494
Target Start/End: Original strand, 23077988 - 23078179
Alignment:
Q  302 atcgtgacacgatttgtgtaccgtgccacgatttggcaggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacg 401  Q
    |||||||||||||||    | |||| ||||||||  |||||||||||||||| |  | |  ||| ||||| ||| |||||||||||||||||||||||||    
T  23077988 atcgtgacacgatttcatcaacgtgtcacgatttcccaggcagtgagcatggattgtagg-gtgctcaattgtgtcacgattttgggaaaacgtgacacg 23078086  T
Q  402 attttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||| | |||||| || ||||||||||||||||||||||| || ||||||||||||||| ||| |||| |||||||| ||||| ||||||||    
T  23078087 attttcaaacttgttgggtacgttttcaggataaggttggtcgtatcttgggtcgtacgcaccaatcgtgccacgattt-ggaaaacgtgacac 23078179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 363 - 478
Target Start/End: Complemental strand, 36988563 - 36988447
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgca 461  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||| | |||| | |||||||||||||||||||| || |||||||||||||||    
T  36988563 gtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcgacttgctgggcaagtttttcaggataaggttggtcgtaccttgggtcgtacgca 36988464  T
Q  462 tcaaccgtgtcacgatt 478  Q
    ||||  ||| |||||||    
T  36988463 tcaattgtgacacgatt 36988447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 33528204 - 33528332
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||| | || |||||||||| ||||||||| || || ||||||||||||||| |||    
T  33528204 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcagaataaggttgatcgtaccttgggtcgtacgcaccaa 33528303  T
Q  466 ccgtgtcacgatttgggaaatcgtgacac 494  Q
     |||||||||||||||  || ||||||||    
T  33528304 tcgtgtcacgatttggacaaacgtgacac 33528332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 36318497 - 36318365
Alignment:
Q  363 gtgttcaatcgtgacacgatttt-gggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgca 461  Q
    |||| |||||||||||||||||| ||| ||||||||||||||||||| |||| | | |||||||||||||||||||||||| || ||||  |||||||||    
T  36318497 gtgtccaatcgtgacacgatttttggggaaacgtgacacgattttcggcttgctggccacgttttcaggataaggttggtcgtaccttgaatcgtacgca 36318398  T
Q  462 tcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
     |||||||||||| |||||  ||| ||||||||    
T  36318397 ccaaccgtgtcacaatttgacaaaacgtgacac 36318365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 35447588 - 35447458
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    ||||||||| || ||||||||||||||||| ||||||||||| |||  ||||  |||| ||||||| |||||||||| || || |||||||||||||||     
T  35447588 gtgttcaattgtaacacgattttgggaaaatgtgacacgattatcggtttgtcgggcaagttttcaagataaggttgctcgtaccttgggtcgtacgcac 35447489  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
    ||| |||||||||| |||||||||||||||||    
T  35447488 caaacgtgtcacga-ttgggaaatcgtgacac 35447458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 338 - 471
Target Start/End: Complemental strand, 17865723 - 17865589
Alignment:
Q  338 caggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataagg 436  Q
    ||||||||||||||||||  ||   ||| |||||| || |||||||||||||||| |||||||||||||| | |||| | || |||||||||||||||||    
T  17865723 caggcagtgagcatggttttttagggtgctcaatcatgtcacgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataagg 17865624  T
Q  437 ttggtcatagcttgggtcgtacgcatcaaccgtgt 471  Q
    |||||| || ||||||||||||||| ||| |||||    
T  17865623 ttggtcgtaccttgggtcgtacgcaccaatcgtgt 17865589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 33118651 - 33118537
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||||||| |||| |||| |||||||||||||| |||||| ||||| | ||||| |||||| ||||||||||| | || ||||||||||||||| |||     
T  33118651 tcaatcgtgtcacgtttttaggaaaacgtgacacaattttcaacttgctgggcacattttcaagataaggttggccgtaccttgggtcgtacgcaccaat 33118552  T
Q  467 cgtgtcacgatttgg 481  Q
    |||||||||||||||    
T  33118551 cgtgtcacgatttgg 33118537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 29867560 - 29867639
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggt 441  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| | |||| | |||||| ||||||||||||    
T  29867560 gtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctgggcaagtttttcaagataaggttggt 29867639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 485
Target Start/End: Original strand, 45099435 - 45099558
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgca 461  Q
    |||| |||||||||||| |||||||||||  ||||||||||||| | |||| | |||| | |||||||||||||||||||| || ||||  |||||||||    
T  45099435 gtgtccaatcgtgacacaattttgggaaattgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgaatcgtacgca 45099534  T
Q  462 tcaaccgtgtcacgatttgggaaa 485  Q
    |||| |||| ||||||| ||||||    
T  45099535 tcaatcgtggcacgattggggaaa 45099558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 494
Target Start/End: Original strand, 10706804 - 10706960
Alignment:
Q  338 caggcagtgagcatggttccttgatgtgttcaatcgtgacacgattttgggaaaacgtgacacgattttc-gacttgttcggcacgttttcaggataagg 436  Q
    ||||||| |||||||||| ||    ||| ||||| ||| |||||||||||||||||||||||||||||||  ||||| | |  ||||||| |||||||||    
T  10706804 caggcagggagcatggtttctcagggtgctcaattgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctggatacgttttaaggataagg 10706903  T
Q  437 ttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacac 494  Q
    |||||| || |||||||||||| || ||| |||| |||| ||| ||||| ||||||||    
T  10706904 ttggtcgtaccttgggtcgtacacaccaatcgtgccacggttt-ggaaaacgtgacac 10706960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 28258760 - 28258873
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||| ||| |||||| |||| ||||||||||||||| | |||| | |  | ||||||||||||||||||||| || ||||||||||||||||||| |    
T  28258760 aatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatc 28258859  T
Q  468 gtgtcacgatttgg 481  Q
    ||| ||||||||||    
T  28258860 gtggcacgatttgg 28258873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 39284585 - 39284657
Alignment:
Q  370 atcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtc 442  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| | || | |||||||||||||||||||||    
T  39284585 atcgtgacacgattttgggaaaacgtgacacaattttcggcttgctgggaaagttttcaggataaggttggtc 39284657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 2334875 - 2334782
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||| | |||| | |||| | |||||||||||||||||||| || |||||||||||| |||||| |||| ||||||||||||||    
T  2334875 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacacatcaatcgtgacacgatttgggaaa 2334782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 371 - 494
Target Start/End: Original strand, 8389732 - 8389857
Alignment:
Q  371 tcgtgacacgattttgggaaaacgtgacacgattttc-gacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccg 468  Q
    ||||| |||||||||||||||||||||||||||||||  ||||| |  | ||| |||||||||||||||||| | || ||||||||||||||| ||| |     
T  8389732 tcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctgagtacgtttttcaggataaggttggacgtaccttgggtcgtacgcaccaatca 8389831  T
Q  469 tgtcacgatttgggaaatcgtgacac 494  Q
    ||||| ||||||| ||| | ||||||    
T  8389832 tgtcatgatttggaaaaacatgacac 8389857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 423 - 485
Target Start/End: Complemental strand, 5723681 - 5723619
Alignment:
Q  423 ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||| ||||||| ||||||    
T  5723681 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaa 5723619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 4503590 - 4503497
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||| | |||| | |||| | |||||||||||||||||||| || ||||| |||||||||||||  ||| ||||||| ||||||    
T  4503590 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaattgtggcacgattggggaaa 4503497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 438
Target Start/End: Complemental strand, 6595482 - 6595406
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggc-acgttttcaggataaggtt 438  Q
    |||| |||||||||||| |||||||||||||||||||||||||| | |||| | ||| |  ||||||||||||||||    
T  6595482 gtgtccaatcgtgacacaattttgggaaaacgtgacacgatttttggcttgctgggctagattttcaggataaggtt 6595406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 17863873 - 17863953
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtc 442  Q
    |||| |||||||||||  ||||||||||||||||||||||||||  ||||| | |||| | |||| |||||||||||||||    
T  17863873 gtgtccaatcgtgacataattttgggaaaacgtgacacgattttttacttgctgggcaagtttttgaggataaggttggtc 17863953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 13569847 - 13569732
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttc-gacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatca 464  Q
    ||||||||| ||  ||||||| |||||||||||||||||||  | ||| | || ||| |||||||||||||||| ||| || ||||| ||||| ||| ||    
T  13569847 tcaatcgtgtcataattttggaaaaacgtgacacgattttcaaatttgctgggtacgtttttcaggataaggtt-gtcgtaccttggatcgtaagcacca 13569749  T
Q  465 accgtgtcacgatttgg 481  Q
    | |||||||||||||||    
T  13569748 atcgtgtcacgatttgg 13569732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 40015426 - 40015319
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    ||||| ||||||||||  |||||| | || |||||||||||||| | | || | | |||||||||| ||||| ||||||| || ||||| ||||| ||||    
T  40015426 gtgttaaatcgtgacataattttgagcaatcgtgacacgatttttggcatgattgacacgttttcatgataatgttggtcgtaccttggatcgtaagcat 40015327  T
Q  463 caaccgtg 470  Q
    ||| ||||    
T  40015326 caatcgtg 40015319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 405
Target Start/End: Complemental strand, 2334805 - 2334767
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattt 405  Q
    |||||||||||||||||| || |||||||||||||||||    
T  2334805 tcaatcgtgacacgatttgggaaaaacgtgacacgattt 2334767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 407
Target Start/End: Complemental strand, 25410156 - 25410118
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttc 407  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  25410156 aatcgtgacacgatcttgggaaatcgtgacacgattttc 25410118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 407
Target Start/End: Original strand, 30833031 - 30833069
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttc 407  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  30833031 aatcgtgacacgatcttgggaaatcgtgacacgattttc 30833069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 485
Target Start/End: Complemental strand, 36206092 - 36206030
Alignment:
Q  423 ttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttgggaaa 485  Q
    |||||||||||||||||||| || ||||| | |||||||||||  ||| ||||||| ||||||    
T  36206092 ttttcaggataaggttggtcgtaccttggattgtacgcatcaattgtggcacgattggggaaa 36206030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 7450869 - 7450905
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgatttt 406  Q
    |||||||||||||||| |||||||||||||||||||||    
T  7450869 aatcgtgacacgattt-gggaaaacgtgacacgatttt 7450905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 405
Target Start/End: Original strand, 6266384 - 6266420
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattt 405  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  6266384 aatcgtgacacgattgtgggaaatcgtgacacgattt 6266420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 20902 - 20771
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||| || | ||||| || |||||||||||| || |||||||||||||||     
T  20902 gtgtccaatcatgacacgattttgggaaaacgtgacacgattttcggcttgttgggaaagtttttagaataaggttggtcgtaccttgggtcgtacgcac 20803  T
Q  463 caaccgtgtcacgatttgggaaatcgtgacac 494  Q
     || ||||||||||||||| ||| ||| ||||    
T  20802 taaacgtgtcacgatttggcaaaacgtaacac 20771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 65; Significance: 2e-28; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 367 - 494
Target Start/End: Complemental strand, 3010 - 2882
Alignment:
Q  367 tcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    ||||||||| |||||||||||||||||||||| |||||||| | |||| | || | ||||||||||||||||||||| || ||||||||||||||| |||    
T  3010 tcaatcgtgtcacgattttgggaaaacgtgacccgattttcaaacttgctgggtatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaa 2911  T
Q  466 ccgtgtcacgatttgggaaatcgtgacac 494  Q
     |||||||||||||||  || ||||||||    
T  2910 tcgtgtcacgatttggacaaacgtgacac 2882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 366 - 494
Target Start/End: Complemental strand, 6203 - 6074
Alignment:
Q  366 ttcaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatca 464  Q
    |||||||||| || ||||||||||||| |||||||||||||| | |||| | || ||||||||||||||||||||||| || ||||||||||||||| ||    
T  6203 ttcaatcgtgtcatgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcacca 6104  T
Q  465 accgtgtcacgatttgggaaatcgtgacac 494  Q
    | |||||||| ||||||  || ||||||||    
T  6103 atcgtgtcacaatttggacaaacgtgacac 6074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 132862 - 132975
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||||||||||||||||| | || ||||||| ||||||| | |||| | |  | ||||||||||||||||||||| || ||||||||||||| ||||| |    
T  132862 aatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatc 132961  T
Q  468 gtgtcacgatttgg 481  Q
    ||| ||||||||||    
T  132962 gtgacacgatttgg 132975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 413
Target Start/End: Complemental strand, 149547 - 149498
Alignment:
Q  364 tgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttg 413  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||||| ||||    
T  149547 tgttcaatcgtgatacgattttgggaaaatgtgtcacgattttcggcttg 149498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 363 - 479
Target Start/End: Complemental strand, 17751 - 17635
Alignment:
Q  363 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcat 462  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| | |||| | |||| | ||||| ||||||||||||| || | || ||||||||||     
T  17751 gtgtccaaccgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagctttcatgataaggttggtcgtaccctgagtcgtacgcac 17652  T
Q  463 caaccgtgtcacgattt 479  Q
    ||| |||||||||||||    
T  17651 caaacgtgtcacgattt 17635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 36415 - 36528
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||| |||||||||| ||||||||||||| |||||| | |||| | || ||||||||||||||||||||||| || ||||||||||||||| ||| |    
T  36415 aatcgtggcacgattttgtgaaaacgtgacacaattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 36514  T
Q  468 gtgtcacgatttgg 481  Q
     || ||||||||||    
T  36515 atggcacgatttgg 36528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 43544 - 43657
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||||||  ||||||||| |||| ||||||| ||||||| | |||| | |  | ||||||||||||||||||||| || ||||||||||| | ||||| |    
T  43544 aatcgtggtacgattttgtgaaatcgtgacatgattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtatgtatcaatc 43643  T
Q  468 gtgtcacgatttgg 481  Q
    ||| ||||||||||    
T  43644 gtggcacgatttgg 43657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 393 - 480
Target Start/End: Original strand, 6820 - 6907
Alignment:
Q  393 cgtgacacgattttcgacttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttg 480  Q
    ||||||||||||||| ||||| | || ||||||||||||||||||||||  || ||||||||||||||| ||||| ||||||||||||    
T  6820 cgtgacacgattttcaacttgctaggaacgttttcaggataaggttggttgtaccttgggtcgtacgcaccaaccatgtcacgatttg 6907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 368 - 485
Target Start/End: Original strand, 434217 - 434336
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttc-gacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaa 465  Q
    |||||||||||||||||||||||| ||||||||||||||  | |||| | |||| | |||||||||||||||||||| || ||||| |||||||||| ||    
T  434217 caatcgtgacacgattttgggaaatcgtgacacgattttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcataaa 434316  T
Q  466 ccgtgtcacgatttgggaaa 485  Q
     |||| ||||||| ||||||    
T  434317 tcgtggcacgattggggaaa 434336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 368 - 478
Target Start/End: Original strand, 114272 - 114382
Alignment:
Q  368 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgttcggcacg-ttttcaggataaggttggtcatagcttgggtcgtacgcatcaac 466  Q
    ||||| ||||||||| ||||||||||||||||||||||| | |||| | ||||   |||||||||||||||||||  || ||||||||||||||||||      
T  114272 caatcatgacacgatattgggaaaacgtgacacgattttgg-cttgctgggcaaaattttcaggataaggttggtggtaccttgggtcgtacgcatcact 114370  T
Q  467 cgtgtcacgatt 478  Q
    |||| |||||||    
T  114371 cgtgacacgatt 114382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 481
Target Start/End: Complemental strand, 45713 - 45600
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    ||||||| ||||||| || |||| ||||||||||||||| | |||| | |  | ||||||||||||||||||||| || ||||||||||||  ||||| |    
T  45713 aatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggctaagttttcaggataaggttggtcgtaccttgggtcgtacatatcaatc 45614  T
Q  468 gtgtcacgatttgg 481  Q
    ||| ||||||||||    
T  45613 gtgacacgatttgg 45600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 480
Target Start/End: Original strand, 8024 - 8112
Alignment:
Q  393 cgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaaccgtgtcacgatttg 480  Q
    ||||||||||||||| | |||||| |  | ||||||||||||||||||||| || ||||||||||||| ||||| |||| |||||||||    
T  8024 cgtgacacgattttcaaacttgttggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgatttg 8112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 475
Target Start/End: Original strand, 1193 - 1300
Alignment:
Q  369 aatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgttcggcacgttttcaggataaggttggtcatagcttgggtcgtacgcatcaacc 467  Q
    |||||||  ||||||||| |||| ||||||||||||||  | |||| | |  | ||||||||||||||||||||| || ||| ||||||||| ||||| |    
T  1193 aatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagttttcaggataaggttggtcgtaccttcggtcgtacgtatcaatc 1292  T
Q  468 gtgtcacg 475  Q
    ||| ||||    
T  1293 gtggcacg 1300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 406
Target Start/End: Complemental strand, 86095 - 86066
Alignment:
Q  377 cacgattttgggaaaacgtgacacgatttt 406  Q
    ||||||||||||||||||||||||||||||    
T  86095 cacgattttgggaaaacgtgacacgatttt 86066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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