View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13207_high_11 (Length: 302)
Name: NF13207_high_11
Description: NF13207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13207_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 18 - 301
Target Start/End: Original strand, 33121438 - 33121721
Alignment:
| Q |
18 |
taagtcattctagaatttaattggtatgcattgtctgtgtaaggatcattttcaataatgtgacagcttatgattgattgattgtgtaaaaaatattgta |
117 |
Q |
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| T |
33121438 |
taagtcattctagaatttaattggtatgcattgtctgtgtaaggatcattttcaataatgtgacagcttatgattgattgattgtgtaaaaaatattgta |
33121537 |
T |
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| Q |
118 |
tcaaaatgaaactcgtcgttctaacctgatcaatgatttcatattttgaaggtggtgtgttataaaaagcctttgttctttctttaggaggtgcagcaaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33121538 |
tcaaaatgaaactcgtcgttctaacctgatcaatgatttcatattttgaaggtggtgtgttataaaaagcctttgttctttctttaggaggtgcagcaaa |
33121637 |
T |
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| Q |
218 |
aactctactcatcttattctcgaggagagtaataggaacaccttgttgagtccatgaacctggcttcatttcaggctcagcgcc |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33121638 |
aactctactcatcttattctcgaggagagtaataggaacaccttgttgagtccatgaacctggcttcatttcaggctcagcgcc |
33121721 |
T |
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