View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13207_high_2 (Length: 377)
Name: NF13207_high_2
Description: NF13207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13207_high_2 |
 |  |
|
| [»] scaffold0044 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 230; Significance: 1e-127; HSPs: 15)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 28482472 - 28482177
Alignment:
| Q |
1 |
atttcagatgatgccacaccctatatatacaaatggaaaagtcgaacaaaaattaatcttaaaattagagaggaagaaaatttacaatgatagctgctta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28482472 |
atttcagatgatgccacaccctatatatacaaatggaaaagtagaacaaaaattaatcttaaaattagagaggaagaaaatttaccatgatagctgctta |
28482373 |
T |
 |
| Q |
101 |
gttaatgatc-tttatgtatacannnnnnngggtaaaccaagagaaagtccagttgctttcatataagatataagctgtttttataagttatcttggaga |
199 |
Q |
| |
|
|||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
28482372 |
gttaatgatcttttatgtatacatttttttgggtaaaccaggagaaagtccagttgctttcatataagctataagctgtttttataagttatcttggaga |
28482273 |
T |
 |
| Q |
200 |
gcttacgagaaaataagctaaaaatagtttatgaatatatcataaggtgtttctatgagctctatcgaacagtctcacaagttcgtatttcagtagat |
297 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
28482272 |
gcttac--gaaaataagctaaaaatagtttatgaatatatcataagatgtttctatgagctctatcgaacaatctcacaagttcgtatgtcagtagat |
28482177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 28482153 - 28482109
Alignment:
| Q |
298 |
cattcccataatcaattgaacttatcttcaataaaagtctatatt |
342 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28482153 |
cattcccataatcaattgaacttatcttcaataaaagtctatatt |
28482109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 283
Target Start/End: Original strand, 4622081 - 4622205
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataaggtgtttctatg |
256 |
Q |
| |
|
||||||||||| |||||||||||| ||| | ||||||||||||||| | |||||||||||||||| || ||||| | || ||||||| |||| | || |
|
|
| T |
4622081 |
tttcatataagctataagctgtttccatatgctatcttggagagctt--gtgaaaataagctaaaaacagcttatggacatgtcataagatgttcccatt |
4622178 |
T |
 |
| Q |
257 |
agctctatcgaacagtctcacaagttc |
283 |
Q |
| |
|
|| ||| | |||||||| |||||||| |
|
|
| T |
4622179 |
agatcttccaaacagtctaacaagttc |
4622205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 7137068 - 7136994
Alignment:
| Q |
169 |
tataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataag |
245 |
Q |
| |
|
||||||||||||| ||||| ||||||||||| |||| ||||||||||| |||||| |||||||||| ||||||| |
|
|
| T |
7137068 |
tataagctgttttcataagctatcttggagaactta--tgaaaataagctgaaaataacttatgaatatgtcataag |
7136994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 44116005 - 44115934
Alignment:
| Q |
139 |
aagagaaagtccagttgctttcatataagatataagctgtttttataagttatcttggagagcttacgagaa |
210 |
Q |
| |
|
|||| |||||| | ||| |||||||||| |||||| ||||||||||||| | ||||||||||| || ||||| |
|
|
| T |
44116005 |
aagataaagtcaaattgttttcatataacatataaactgtttttataagctgtcttggagagcgtatgagaa |
44115934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 44422687 - 44422734
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagctta |
204 |
Q |
| |
|
||||||||||| |||||||| |||||||||| |||| ||||||||||| |
|
|
| T |
44422687 |
tttcatataagctataagctatttttataagctatcctggagagctta |
44422734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 4548722 - 4548773
Alignment:
| Q |
170 |
ataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaa |
223 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
4548722 |
ataagctgttttcataagctatcttggagagctt--cagaaaataagctaaaaa |
4548773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 27820414 - 27820344
Alignment:
| Q |
162 |
tataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaa |
234 |
Q |
| |
|
|||||| |||| |||||||||||||| ||||||||||| ||| ||||||||||| ||||||| ||||||| |
|
|
| T |
27820414 |
tataagctatatgctgtttttataagctatcttggagaattta--tgaaaataagctgaaaatagcttatgaa |
27820344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 281
Target Start/End: Complemental strand, 31517822 - 31517700
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataaggtgtttctatg |
256 |
Q |
| |
|
||||||||||| |||||||||| || |||| | |||||||||||||| ||||||||||| |||| || ||||||| || |||| || ||||| || |
|
|
| T |
31517822 |
tttcatataagctataagctgtcttcataatctgtcttggagagctta--tgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgata |
31517725 |
T |
 |
| Q |
257 |
agctctatcgaacagtctcacaagt |
281 |
Q |
| |
|
|| ||| | ||||||||||||||| |
|
|
| T |
31517724 |
agttctcccaaacagtctcacaagt |
31517700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 2777885 - 2777966
Alignment:
| Q |
162 |
tataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataag |
245 |
Q |
| |
|
|||||| ||||||||||||| |||||||| |||||||| |||| ||||||||||| |||| | ||||||||| ||||||| |
|
|
| T |
2777885 |
tataagctataagctgttttaataagttaacttggagaactta--tgaaaataagctgaaaacggcttatgaatacgtcataag |
2777966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 25006129 - 25006069
Alignment:
| Q |
144 |
aaagtccagttgctttcatataagatataagctgtttttataagttatcttggagagctta |
204 |
Q |
| |
|
|||||| | ||| ||||||||||| |||||| |||||| ||||| ||||||||||| |||| |
|
|
| T |
25006129 |
aaagtcaaattgttttcatataagctataagttgttttcataagctatcttggagatctta |
25006069 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 27140477 - 27140513
Alignment:
| Q |
168 |
atataagctgtttttataagttatcttggagagctta |
204 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
27140477 |
atataagctgtttttataagctatcatggagagctta |
27140513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 34290229 - 34290310
Alignment:
| Q |
162 |
tataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataag |
245 |
Q |
| |
|
|||||| ||||||||||||| ||||| ||||||| ||| |||| ||||||||||| |||| | |||||||||| ||||||| |
|
|
| T |
34290229 |
tataagctataagctgttttcataagctatcttgaagaactta--tgaaaataagctgaaaacaacttatgaatatgtcataag |
34290310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 37654684 - 37654753
Alignment:
| Q |
155 |
gctttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatag |
226 |
Q |
| |
|
||||||||||||| || ||| |||||||| |||||||| ||||||| ||| | | |||||||||||||||| |
|
|
| T |
37654684 |
gctttcatataagctacaagttgtttttacaagttatcgtggagagttta--aaataataagctaaaaatag |
37654753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 52286666 - 52286759
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataaggtgtttc |
252 |
Q |
| |
|
||||||||||| ||||| || |||| |||||| |||||| |||| ||| | ||||||||||||||||| ||||| | |||||| ||| |||||| |
|
|
| T |
52286666 |
tttcatataagctataaactattttcataagtcatcttgaagagtttatgg--aaataagctaaaaatagcttatggacatatcagaagatgtttc |
52286759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 33787840 - 33787780
Alignment:
| Q |
144 |
aaagtccagttgctttcatataagatataagctgtttttataagttatcttggagagctta |
204 |
Q |
| |
|
|||||| | ||| ||||||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
33787840 |
aaagtcaaattgatttcatataagttataagctgttttcataagttatcttggagagctta |
33787780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 1275137 - 1275184
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagctta |
204 |
Q |
| |
|
||||||||||| ||||||||||||| ||| |||||| ||||||||||| |
|
|
| T |
1275137 |
tttcatataagctataagctgttttcatatgttatcctggagagctta |
1275184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 262
Target Start/End: Original strand, 8010352 - 8010448
Alignment:
| Q |
164 |
taagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataaggtgtttctatgagctct |
262 |
Q |
| |
|
|||| ||||||||||||| |||||||||| |||||| |||| || |||||| || ||||||| ||||||| || |||| || ||||||||| |||||| |
|
|
| T |
8010352 |
taagttataagctgttttaataagttatcctggagaactta-tag-aaataaactgaaaatagcttatgaacatgtcatgagttgtttctataagctct |
8010448 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 31812090 - 31812048
Alignment:
| Q |
162 |
tataagatataagctgtttttataagttatcttggagagctta |
204 |
Q |
| |
|
||||||||||||| |||||| ||||| |||||||||||||||| |
|
|
| T |
31812090 |
tataagatataagttgttttcataagctatcttggagagctta |
31812048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 281
Target Start/End: Complemental strand, 3775157 - 3775088
Alignment:
| Q |
212 |
ataagctaaaaatagtttatgaatatatcataaggtgtttctatgagctctatcgaacagtctcacaagt |
281 |
Q |
| |
|
||||||| |||| |||||||| | || ||||||| ||||||||| |||||| |||| |||||||||||| |
|
|
| T |
3775157 |
ataagctgaaaacagtttatgcacatgtcataagctgtttctataagctcttccgaatagtctcacaagt |
3775088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 22742341 - 22742394
Alignment:
| Q |
144 |
aaagtccagttgctttcatataagatataagctgtttttataagttatcttgga |
197 |
Q |
| |
|
|||||| | ||| ||||||||||| |||||||| ||||||||||||||| |||| |
|
|
| T |
22742341 |
aaagtcaaattgttttcatataagctataagctatttttataagttatcctgga |
22742394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 27721716 - 27721827
Alignment:
| Q |
168 |
atataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataaggtgtttctatgagctctatcga |
267 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||| | ||||||||||| |||| || ||||| |||| ||||||| |||| ||| |||||| | | |
|
|
| T |
27721716 |
atataagctgttttcataagttatcctggagagctt--gcgaaaataagctgaaaacagcttatggatatgtcataagtagtttttataagctctcttaa |
27721813 |
T |
 |
| Q |
268 |
acagtctcacaagt |
281 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
27721814 |
acaatctcacaagt |
27721827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 36722751 - 36722678
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatg |
232 |
Q |
| |
|
||||||||||| |||||| |||||| |||||||||| || |||||||| ||||||||||| ||||||| ||||| |
|
|
| T |
36722751 |
tttcatataagttataagttgttttgataagttatcctgaagagctta--tgaaaataagcttaaaatagattatg |
36722678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 56007678 - 56007714
Alignment:
| Q |
168 |
atataagctgtttttataagttatcttggagagctta |
204 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
56007678 |
atataagttgtttttataagttatcttggagagctta |
56007714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 18628621 - 18628578
Alignment:
| Q |
161 |
atataagatataagctgtttttataagttatcttggagagctta |
204 |
Q |
| |
|
||||||| ||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
18628621 |
atataagttataaactgttttcataagttatcttggagagctta |
18628578 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 30581759 - 30581716
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagag |
200 |
Q |
| |
|
|||| |||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
30581759 |
tttcgtataagctataagctgttttaataagttatcttggagag |
30581716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 17975451 - 17975405
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagctt |
203 |
Q |
| |
|
||||||||| | |||||||||||||||||| ||||||||||||||| |
|
|
| T |
17975451 |
tttcatatatgtaataagctgtttttataagctatcttggagagctt |
17975405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 281
Target Start/End: Original strand, 2996565 - 2996683
Alignment:
| Q |
161 |
atataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataaggtgtttctatgagct |
260 |
Q |
| |
|
||||||| |||||| |||||| ||||| ||||||||||||| || ||||||||| | |||| || ||||| | || ||||||| ||||| || |||| |
|
|
| T |
2996565 |
atataagttataagttgttttcataagctatcttggagagcgta--tgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagct |
2996662 |
T |
 |
| Q |
261 |
ctatcgaacagtctcacaagt |
281 |
Q |
| |
|
|| || |||||||||| |||| |
|
|
| T |
2996663 |
ctctcaaacagtctcaaaagt |
2996683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 20109581 - 20109610
Alignment:
| Q |
170 |
ataagctgtttttataagttatcttggaga |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
20109581 |
ataagctgtttttataagttatcttggaga |
20109610 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 18066116 - 18066190
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatga |
233 |
Q |
| |
|
||||||||||| ||||||||||||| ||||| ||||||||||| |||| |||||||||| | ||||||| |||||| |
|
|
| T |
18066116 |
tttcatataagctataagctgttttcataagctatcttggagaactta--agaaaataaggtgaaaatagcttatga |
18066190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 16353849 - 16353891
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggaga |
199 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
16353849 |
tttcatataagctataagctgtttttataagctatcttggaga |
16353891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 281
Target Start/End: Complemental strand, 17221571 - 17221500
Alignment:
| Q |
210 |
aaataagctaaaaatagtttatgaatatatcataaggtgtttctatgagctctatcgaacagtctcacaagt |
281 |
Q |
| |
|
|||||||||||||| |||||||| |||| ||||||| | |||| || |||||| |||||||||||| |||| |
|
|
| T |
17221571 |
aaataagctaaaaaaagtttatggatatgtcataagatatttccataagctcttccgaacagtctcagaagt |
17221500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 3078722 - 3078676
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagctt |
203 |
Q |
| |
|
||||||||| | |||||||||||||||||| ||||||||||||||| |
|
|
| T |
3078722 |
tttcatatatgtaataagctgtttttataagctatcttggagagctt |
3078676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 18179322 - 18179255
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatag |
226 |
Q |
| |
|
||||||||||| ||||||||| ||| ||||| |||| |||||| ||||| ||||||||||| ||||||| |
|
|
| T |
18179322 |
tttcatataagctataagctgctttcataagctatcctggagaacttac--gaaaataagctgaaaatag |
18179255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 34339894 - 34339964
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagttt |
229 |
Q |
| |
|
|||| |||||| ||||| || |||| |||||| |||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
34339894 |
tttcgtataaggtataaactattttcataagtattcttggagagctta--agaaaataagctgaaaatagttt |
34339964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 40279190 - 40279260
Alignment:
| Q |
162 |
tataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaa |
234 |
Q |
| |
|
||||||||||||| |||||| ||||| ||| ||||||| |||| |||||| |||| ||||||||||||||| |
|
|
| T |
40279190 |
tataagatataagttgttttcataagctatgttggagaactta--tgaaaattagctgaaaatagtttatgaa |
40279260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 41875741 - 41875675
Alignment:
| Q |
151 |
agttgctttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagcta |
219 |
Q |
| |
|
||||| |||| |||||| | ||||||||||| ||||| |||||||| ||||||| ||||||||||||| |
|
|
| T |
41875741 |
agttgttttcgtataagctgtaagctgttttcataagctatcttggtgagctta--agaaaataagcta |
41875675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 37276734 - 37276778
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagc |
201 |
Q |
| |
|
||||||||||| |||||| |||||| |||||||||| |||||||| |
|
|
| T |
37276734 |
tttcatataagttataagttgttttcataagttatcctggagagc |
37276778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 2201116 - 2201209
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataaggtgtttc |
252 |
Q |
| |
|
||||||||||| ||||||||||||| || || ||||||||| || ||| || ||| ||||| |||| |||||||||| |||||||||| |||||| |
|
|
| T |
2201116 |
tttcatataagctataagctgttttcattagctatcttggatagttta--aggaaaaaagctgaaaagagtttatgaacatatcataagttgtttc |
2201209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 33405249 - 33405162
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataag |
245 |
Q |
| |
|
||||||||||| ||||||||||||| ||||| ||||||| ||| |||| || || ||||| |||| |||||||||| |||||||||| |
|
|
| T |
33405249 |
tttcatataagctataagctgttttcataagctatcttgaagaacttatga-aagttaagccgaaaacagtttatgaacatatcataag |
33405162 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 52618991 - 52619076
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataa |
244 |
Q |
| |
|
||||||||||| ||||||||||||| | ||| ||||||| ||||||| | ||||||||| | ||||||| ||||||| || |||||| |
|
|
| T |
52618991 |
tttcatataagttataagctgttttcacaagctatcttgaagagctt--gtgaaaataaggtgaaaatagcttatgaacatgtcataa |
52619076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 281
Target Start/End: Original strand, 27294385 - 27294456
Alignment:
| Q |
210 |
aaataagctaaaaatagtttatgaatatatcataaggtgtttctatgagctctatcgaacagtctcacaagt |
281 |
Q |
| |
|
||||||| | |||| || |||||| ||||||| || |||||||||||||||| || ||||||||||||||| |
|
|
| T |
27294385 |
aaataagatgaaaacagcttatgagcatatcatgagttgtttctatgagctctctcaaacagtctcacaagt |
27294456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 2100232 - 2100190
Alignment:
| Q |
162 |
tataagatataagctgtttttataagttatcttggagagctta |
204 |
Q |
| |
|
|||||| |||||| |||||| |||||||||||||||||||||| |
|
|
| T |
2100232 |
tataagctataagttgttttcataagttatcttggagagctta |
2100190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 281
Target Start/End: Complemental strand, 14548803 - 14548681
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataaggtgtttctatg |
256 |
Q |
| |
|
||||||||||| |||||| |||||| ||||||||| ||||||||||| | ||||||||| |||| || ||| || || ||||| | ||||| || |
|
|
| T |
14548803 |
tttcatataagctataagttgttttcataagttattctggagagctta--tggaaataagctgaaaacagcctattaaaatgtcatacgttgttttcata |
14548706 |
T |
 |
| Q |
257 |
agctctatcgaacagtctcacaagt |
281 |
Q |
| |
|
|||||| || ||||||||||||||| |
|
|
| T |
14548705 |
agctctctcaaacagtctcacaagt |
14548681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 2318632 - 2318680
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagtta-tcttggagagctta |
204 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
2318632 |
tttcatataaactataagttgtttttataagttattcttggagagctta |
2318680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 20669171 - 20669207
Alignment:
| Q |
168 |
atataagctgtttttataagttatcttggagagctta |
204 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
20669171 |
atataagctgttttcataagctatcttggagagctta |
20669207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 297
Target Start/End: Original strand, 22667413 - 22667529
Alignment:
| Q |
178 |
tttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataaggtgtttctatgagctctatcgaacagtctcac |
277 |
Q |
| |
|
|||| ||||| ||||||||||||||||| | |||||||||||||||| || |||| || | ||| | |||||| || | |||| || ||||||||||| |
|
|
| T |
22667413 |
ttttcataagctatcttggagagcttac--ggaaataagctaaaaataacttctgaa-atgttatatgctgtttccataaactctctcaaacagtctcac |
22667509 |
T |
 |
| Q |
278 |
aagttcgtatttcagtagat |
297 |
Q |
| |
|
|||| | ||| ||||||||| |
|
|
| T |
22667510 |
aagtgcttatgtcagtagat |
22667529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 297
Target Start/End: Original strand, 22724052 - 22724168
Alignment:
| Q |
178 |
tttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataaggtgtttctatgagctctatcgaacagtctcac |
277 |
Q |
| |
|
|||| ||||| ||||||||||||||||| | |||||||||||||||| || |||| || | ||| | |||||| || | |||| || ||||||||||| |
|
|
| T |
22724052 |
ttttcataagctatcttggagagcttac--ggaaataagctaaaaataacttctgaa-atgttatatgctgtttccataaactctctcaaacagtctcac |
22724148 |
T |
 |
| Q |
278 |
aagttcgtatttcagtagat |
297 |
Q |
| |
|
|||| | ||| ||||||||| |
|
|
| T |
22724149 |
aagtgcttatgtcagtagat |
22724168 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 25183009 - 25182945
Alignment:
| Q |
219 |
aaaaatagtttatgaatatatcataaggtgtttctatgagctctatcgaacagtctcacaagttc |
283 |
Q |
| |
|
|||||||| ||||| |||| ||||||| ||||| || |||||| || ||||||||||||||||| |
|
|
| T |
25183009 |
aaaaatagcttatggatatgtcataagttgttttcataagctctctcaaacagtctcacaagttc |
25182945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 40665424 - 40665464
Alignment:
| Q |
164 |
taagatataagctgtttttataagttatcttggagagctta |
204 |
Q |
| |
|
|||| |||||| |||||| |||||||||||||||||||||| |
|
|
| T |
40665424 |
taagttataagatgttttcataagttatcttggagagctta |
40665464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 2568646 - 2568738
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataaggtgttt |
251 |
Q |
| |
|
|||| |||||| |||||| |||||| ||||| |||| ||||||||| | || |||||||||||||||| |||||||||| ||||||| ||||| |
|
|
| T |
2568646 |
tttcgtataagctataagttgttttcataagctatcatggagagctaatga--aaataagctaaaaataacttatgaatatgtcataagctgttt |
2568738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 17560496 - 17560454
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggaga |
199 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
17560496 |
tttcatataaggtataagctgtttttataagttatcttcgaga |
17560454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 39105452 - 39105527
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaa |
234 |
Q |
| |
|
|||| |||||| ||||| ||||||| ||||| ||||||||||| |||| ||||||||||||||||||| ||||||| |
|
|
| T |
39105452 |
tttcgtataagctataatctgttttcataagctatcttggagaactta--tgaaaataagctaaaaatagcttatgaa |
39105527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 12975335 - 12975382
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagctta |
204 |
Q |
| |
|
||||||||||| |||||||||| || ||||| |||||||||||||||| |
|
|
| T |
12975335 |
tttcatataagctataagctgtgttcataagctatcttggagagctta |
12975382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 21768279 - 21768229
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacga |
207 |
Q |
| |
|
|||||||||| | ||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
21768279 |
tttcatataaactttaagctgttttcataagttatcttgaagagcttacga |
21768229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 10907366 - 10907403
Alignment:
| Q |
156 |
ctttcatataagatataagctgtttttataagttatct |
193 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10907366 |
ctttcatataatctataagctgtttttataagttatct |
10907403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 18875336 - 18875396
Alignment:
| Q |
144 |
aaagtccagttgctttcatataagatataagctgtttttataagttatcttggagagctta |
204 |
Q |
| |
|
|||||| | ||| ||||||| ||| ||||||||||||| ||||| |||| ||||||||||| |
|
|
| T |
18875336 |
aaagtcaaattgatttcatacaagttataagctgttttaataagatatcctggagagctta |
18875396 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 41052907 - 41052959
Alignment:
| Q |
210 |
aaataagctaaaaatagtttatgaatatatcataaggtgtttctatgagctct |
262 |
Q |
| |
|
||||||| ||||||||||||||||| || ||||| | ||||||||| |||||| |
|
|
| T |
41052907 |
aaataagttaaaaatagtttatgaacatgtcataggttgtttctataagctct |
41052959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 27028831 - 27028894
Alignment:
| Q |
169 |
tataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaa |
234 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||| ||||||||||| ||||||| ||||||| |
|
|
| T |
27028831 |
tataagctgttttcataagctatcttggagagctta--tgaaaataagctgaaaatagcttatgaa |
27028894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 37822737 - 37822693
Alignment:
| Q |
160 |
catataagatataagctgtttttataagttatcttggagagctta |
204 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| |||||||| |
|
|
| T |
37822737 |
catataagatataagctgtttatagaagttatcttgaagagctta |
37822693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 37353319 - 37353245
Alignment:
| Q |
169 |
tataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataag |
245 |
Q |
| |
|
||||||||||||| |||| |||||| ||||||||| || |||||| || |||| ||||||||||||| ||||||| |
|
|
| T |
37353319 |
tataagctgttttcttaagctatctttgagagcttatga--aaataatctgaaaacagtttatgaatatgtcataag |
37353245 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 37353224 - 37353188
Alignment:
| Q |
208 |
gaaaataagctaaaaatagtttatgaatatatcataa |
244 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||| |
|
|
| T |
37353224 |
gaaaataagctgaaaatagtttatgaatatgtcataa |
37353188 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 38874634 - 38874707
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatg |
232 |
Q |
| |
|
||||||||||| | ||||||||||| ||||| ||| ||||||| | || ||||||||||||||||||| ||||| |
|
|
| T |
38874634 |
tttcatataagctctaagctgttttcataagctattttggagaacata--tgaaaataagctaaaaatagcttatg |
38874707 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 14768111 - 14768153
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggaga |
199 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
14768111 |
tttcatataaggtataagctgtttttataagttatcttcgaga |
14768153 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 251
Target Start/End: Original strand, 12110353 - 12110440
Alignment:
| Q |
162 |
tataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataaggtgttt |
251 |
Q |
| |
|
|||||| ||||||||||||| ||||| ||||||| ||| |||| |||||||| ||||||| ||||| |||| || ||||||| ||||| |
|
|
| T |
12110353 |
tataagctataagctgttttcataagctatcttgaagaactta--tgaaaataatctaaaaacagtttgtgaacatgtcataagttgttt |
12110440 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 20476593 - 20476549
Alignment:
| Q |
156 |
ctttcatataagatataagctgtttttataagttatcttggagag |
200 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
20476593 |
ctttcatctaagatataagctgtttcgataagctatcttggagag |
20476549 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 280
Target Start/End: Complemental strand, 25670668 - 25670547
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttggagagcttacgagaaaataagctaaaaatagtttatgaatatatcataaggtgtttctatg |
256 |
Q |
| |
|
||||||||||| ||| | ||||||||||| ||||||||||||||| | ||||||||||| |||| | ||||| || || ||||||| ||||| || |
|
|
| T |
25670668 |
tttcatataagctatcaattgtttttataacatatcttggagagctt--gtgaaaataagctgaaaacaatttattaacatgtcataagttgttttcata |
25670571 |
T |
 |
| Q |
257 |
agctctatcgaacagtctcacaag |
280 |
Q |
| |
|
|| | | || |||||||||||||| |
|
|
| T |
25670570 |
agttttctcaaacagtctcacaag |
25670547 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0044 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 52032 - 51992
Alignment:
| Q |
157 |
tttcatataagatataagctgtttttataagttatcttgga |
197 |
Q |
| |
|
||||||||||| ||||||||||||| || |||||||||||| |
|
|
| T |
52032 |
tttcatataagctataagctgttttcattagttatcttgga |
51992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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