View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13207_high_7 (Length: 333)
Name: NF13207_high_7
Description: NF13207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13207_high_7 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 11 - 333
Target Start/End: Original strand, 49914170 - 49914492
Alignment:
| Q |
11 |
gcagaacctgtgcatggagttgaactttacttttgcccacctcataagaaaacagttgaaatgctcagcaagatacttccaaaggaacaaattgaagcag |
110 |
Q |
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| T |
49914170 |
gcagaacctgtgcatggagttgaactttacttttgcccacctcataagaaaacagttgaaatgctcagcaagatacttccaaaggaacaaattgaagcag |
49914269 |
T |
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| Q |
111 |
ttaattctattgataatggtctaattggtattattgtatggagaaaaactaatataactacatctatatctcccaccgcgcaatcacatcacaaacatag |
210 |
Q |
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| T |
49914270 |
ttaattctattgataatggtctaattggtattattgtatggagaaaaactaatataactacatctatatctcccaccgcgcaatcacatcacaaacatag |
49914369 |
T |
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| Q |
211 |
ctctaaaaggcaaattttgagtagaagacaacaagatactaatgtgaatgccaattctacccataatgcagtgccctctatggggtttaagaccaccgtg |
310 |
Q |
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| T |
49914370 |
ctctaaaaggcaaattttgagtagaagacaacaagatactaatgtgaatgccaattctacccataatgcagtgccctctatggggtttaagaccaccgtg |
49914469 |
T |
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| Q |
311 |
agtgaacctccgagtggtgatga |
333 |
Q |
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| T |
49914470 |
agtgaacctccgagtggtgatga |
49914492 |
T |
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