View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13208_low_2 (Length: 896)
Name: NF13208_low_2
Description: NF13208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13208_low_2 |
 | |
|
| [»] scaffold0294 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 753; Significance: 0; HSPs: 33)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 753; E-Value: 0
Query Start/End: Original strand, 20 - 882
Target Start/End: Original strand, 5174244 - 5175082
Alignment:
| Q |
20 |
atagggcagatagtgttgccggtgttctatgatgttgatccttcagatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctcttgagca |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5174244 |
atagggcagatagtgttgccggtgttctatgatgttgatccttcggatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctcttgagca |
5174343 |
T |
|
| Q |
120 |
gaatttcaaagaagaaaagcacgtccctgaaatggagagatgcacttcgtgaggctgctgagcttgctggctttgtagttccaaatttcaggtaatttaa |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
5174344 |
gaatttcaaagaagaaaagcacgtccctgaaatggagagatgcacttcgtgaggctgctgagcttgctggcttt-------------tcaggtaatttaa |
5174430 |
T |
|
| Q |
220 |
ttcaaccgttacaatacttctatattggagatgttataccaattgtcttgggtaacaggtttttatcaatgctggaaatgattggaattacactttttaa |
319 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5174431 |
ttcaactgttacaatacttctatattggagatgttataccaattgtcttgggtaacaggtttttatcaatgctggaaatgattggaattacactttttaa |
5174530 |
T |
|
| Q |
320 |
tttgtatgtttaatttttctttggtacactttttgtaggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacag |
419 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5174531 |
tttgtatgttcaatttttctttggta-----------ggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattgacaagacag |
5174619 |
T |
|
| Q |
420 |
acttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctactgatagg |
519 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5174620 |
acttgtttgttgctgataatccggtgggactcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctactgatagg |
5174719 |
T |
|
| Q |
520 |
gatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatatt |
619 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5174720 |
gatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatatt |
5174819 |
T |
|
| Q |
620 |
agggaagtttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtattgatt |
719 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5174820 |
agggaagtttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtattgatt |
5174919 |
T |
|
| Q |
720 |
caggaaaagtaatattaaaggatagactttgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgctttgtgtggaag |
819 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5174920 |
caggaaaagtattattaaaggatagactttgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgctttgtgtggaag |
5175019 |
T |
|
| Q |
820 |
tcgtaattggtttggttcaggaagtagaattattatcactaccagaaacaaggacatccttag |
882 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
5175020 |
tcgtaattggtttggttcaggaagtagaattattatcactaccagaaacaaggacatacttag |
5175082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 695; E-Value: 0
Query Start/End: Original strand, 91 - 882
Target Start/End: Original strand, 5276130 - 5276909
Alignment:
| Q |
91 |
tggaaaagcgttccaaagtctcttgagcagaatttcaaagaagaaaagcacgtccctgaaatggagagatgcacttcgtgaggctgctgagcttgctggc |
190 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
5276130 |
tggaaaagcgttccaaagtctcttgagcagaattttaaagaagaaaagcacatccctgaaatggagagatgcacttcgtgaggttgctgagattgctggc |
5276229 |
T |
|
| Q |
191 |
tttgtagttccaaatttcaggtaatttaattcaaccgttacaatacttctatattggagatgttataccaattgtcttgggtaacaggtttttatcaatg |
290 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5276230 |
tttgtagttccaaatttcaggtaatttaattcaaccgttacaatacttctatattggagatgttataccaattgtcttgggtaacaggtttttatcaatg |
5276329 |
T |
|
| Q |
291 |
ctggaaatgattggaattacactttttaatttgtatgtttaatttttctttggtacactttttgtaggaatgaaagtgaagcgattaagaatattgttga |
390 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5276330 |
ctggaaatgattggaattacactttttaatttgtatgtttaatttttctttggtacactttttgtaggaatgaaagtgaagcgattaagaatattgttga |
5276429 |
T |
|
| Q |
391 |
caaagtttcacgttttattaacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagacatc |
490 |
Q |
| |
|
|||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
5276430 |
caaagtttcatgttttattgacaagacatgcttgtttgttgctgataatccagtgggactcaaatctcgagtgcaagatatgattccattgctagacatc |
5276529 |
T |
|
| Q |
491 |
caacaatctaatgatgttctactgatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaatt |
590 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5276530 |
caacaatctaatgatgttctactggtagggatgtggggtatgggacgtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaatt |
5276629 |
T |
|
| Q |
591 |
ttgaaggtaggagcttcattcccaatattagggaagtttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaagg |
690 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5276630 |
ttgaaggtaggagcttcattcccaatattagggaagtttggggg------------caagtggatttacaacaacaacttctatctgatatctttaaagg |
5276717 |
T |
|
| Q |
691 |
aacgtcgaccaagatacaaagtattgattcaggaaaagtaatattaaaggatagactttgtcataagagagtatttatcatacttgacgatgtcgatgag |
790 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5276718 |
aacgtcgaccaagatacaaagtattgattcaggaaaagtaatattaaaggatagacttcgtcataagagagtatttatcatacttgacgatgtcgatgag |
5276817 |
T |
|
| Q |
791 |
ttggagcagttggatgctttgtgtggaagtcgtaattggtttggttcaggaagtagaattattatcactaccagaaacaaggacatccttag |
882 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
5276818 |
ttggagcagttggatgctttgtgtggaagtcgtaattggtttggttcaggaagtagaattattatcactaccagaaacaaggacatacttag |
5276909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 411 - 867
Target Start/End: Original strand, 5431152 - 5431608
Alignment:
| Q |
411 |
acaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttct |
510 |
Q |
| |
|
|||||| |||| |||| |||||||||| ||||||||| | || |||||| |||||||| | |||||| |||||||||||||||||| |||| ||| | |
|
|
| T |
5431152 |
acaagaaagacatgttcattgctgataagccagtgggaattgattctcgaatgcaagatgttattcaacggctagacatccaacaatcaaatggtgtaat |
5431251 |
T |
|
| Q |
511 |
actgatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcatt |
610 |
Q |
| |
|
||| | ||||||||||||||||| || || || ||||| || | || |||| |||| || ||||||| || || |||||||| ||||| ||| || |
|
|
| T |
5431252 |
actacttgggatgtggggtatggggggaatcggaaaaacaactattgcaaaagcaatttataatgaaatcggccgcaagtttgaagggaggagtttcctt |
5431351 |
T |
|
| Q |
611 |
cccaatattagggaagtttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaa |
710 |
Q |
| |
|
| ||| ||||||||||||||| ||||||| | |||||| ||||||||| |||||||||||||||||||||| | ||||||| ||||||||||||||| |
|
|
| T |
5431352 |
gcaaatgttagggaagtttgggagcaacctaccaaacaagtagatttacaagaacaacttctatctgatatcttcagaggaacgacgaccaagatacaaa |
5431451 |
T |
|
| Q |
711 |
gtattgattcaggaaaagtaatattaaaggatagactttgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgcttt |
810 |
Q |
| |
|
|||||||||| || ||| | ||||||||||| || ||||||||||| ||| || |||| ||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
5431452 |
gtattgattctgggaaaattatattaaaggacaggctttgtcataaaagaatacttattgtacttgacgatgtgaatgagttggaacagttggatgcttt |
5431551 |
T |
|
| Q |
811 |
gtgtggaagtcgtaattggtttggttcaggaagtagaattattatcactaccagaaa |
867 |
Q |
| |
|
|||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||| |
|
|
| T |
5431552 |
gtgtggaagtcgtaattggtttggtttagggagtagaataattatcacaaccagaaa |
5431608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 20 - 225
Target Start/End: Complemental strand, 5692926 - 5692721
Alignment:
| Q |
20 |
atagggcagatagtgttgccggtgttctatgatgttgatccttcagatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctcttgagca |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5692926 |
atagggcagatagtgttgccggtgttctatgatgttgatccttcagatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctcttgagca |
5692827 |
T |
|
| Q |
120 |
gaatttcaaagaagaaaagcacgtccctgaaatggagagatgcacttcgtgaggctgctgagcttgctggctttgtagttccaaatttcaggtaatttaa |
219 |
Q |
| |
|
||||||||||||||| | || ||| |||||||||||||| || ||| |||||| ||||| ||||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
5692826 |
gaatttcaaagaagacagacaagtcgctgaaatggagagacgcgcttagtgaggttgctgggcttgctggctttgtagttccaaatttcaggtagtttca |
5692727 |
T |
|
| Q |
220 |
ttcaac |
225 |
Q |
| |
|
|||||| |
|
|
| T |
5692726 |
ttcaac |
5692721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 5275990 - 5276131
Alignment:
| Q |
20 |
atagggcagatagtgttgccggtgttctatgatgttgatccttcagatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctcttgagca |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5275990 |
atagggcagatagtgttgccggtgttctatgatgttgatccttcagatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctcttgagca |
5276089 |
T |
|
| Q |
120 |
gaatttcaaagaagaaaagcacgtccctgaaatggagagatg |
161 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5276090 |
gaatttcaaagaagaaaagcacgtccctgaaattgagagatg |
5276131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 336 - 858
Target Start/End: Complemental strand, 5356954 - 5356426
Alignment:
| Q |
336 |
ttctttggtacactttttgtaggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgctga |
435 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||| || ||| |||||||| | || || ||||||| || ||||||||||||| ||||||||| | |
|
|
| T |
5356954 |
ttctttggtttattttttgtaggaatgaaagtgaagctatcaaggatattgttaaaaatattacacgtttgcttgacaagacagacttatttgttgctaa |
5356855 |
T |
|
| Q |
436 |
taatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagac------atccaacaatctaatgatgttctactgatagggatgtggggt |
529 |
Q |
| |
|
|||||| |||||| | |||||||| ||||||||||||||| | ||||||| ||||||||||| ||||||||| | || |||||||||||||| |
|
|
| T |
5356854 |
taatccggtgggagttgaatctcgtgtgcaagatatgattaagctgctagaacaagatatccaacaatcaaatgatgttttccttctagggatgtggggt |
5356755 |
T |
|
| Q |
530 |
atgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagttt |
629 |
Q |
| |
|
|||||||| |||| ||||| ||| | | |||| ||||| ||| ||||| || || ||||||| ||||| |||||| || | |||||||||||||||| |
|
|
| T |
5356754 |
atgggaggagttggcaaaacaaccatcggaaaagctatttacaataaaattggccgcgattttgatggtagaagcttccttgcaaatattagggaagttt |
5356655 |
T |
|
| Q |
630 |
gggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtattgattcaggaaaagt |
729 |
Q |
| |
|
||| | || ||||| |||||| |||||||| |||||||||| |||||||||| |||| ||| | ||||| |||||||| ||||| |||||| | |
|
|
| T |
5356654 |
gggaggaaaaagctggccaagtgaatttacaagaacaacttctctctgatatctgcaaagacacgacaaccaaaatacaaagcattgaaaatggaaaaat |
5356555 |
T |
|
| Q |
730 |
aatattaaaggatagactttgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgctttgtgtggaagtcgtaattgg |
829 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| | || ||||||| ||||| || ||||| || || ||| ||||||||| |||| | ||||| |
|
|
| T |
5356554 |
catattaaaggatagactttgtcataaaagagtactaattgtacttgatgatgttaatactttggaccaactgaatgttttgtgtggcagtcatcattgg |
5356455 |
T |
|
| Q |
830 |
tttggttcaggaagtagaattattatcac |
858 |
Q |
| |
|
||||||| || |||||||| |||||||| |
|
|
| T |
5356454 |
tttggtttggggagtagaataattatcac |
5356426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 349 - 858
Target Start/End: Original strand, 5368137 - 5368652
Alignment:
| Q |
349 |
tttttgtaggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgctgataatccagtggga |
448 |
Q |
| |
|
||||||||||||||||||| | || || || |||||||||| || ||| | ||| || |||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
5368137 |
tttttgtaggaatgaaagtaaggctatccaggatattgttgaaaatgttacgcgtaagcttgacaagacagaattgtttattgctgataatccagtggga |
5368236 |
T |
|
| Q |
449 |
ctcgaatctcgagtgcaagatatgattcaatt------gctagacatccaacaatctaatgatgttctactgatagggatgtggggtatgggaggtattg |
542 |
Q |
| |
|
| |||||||||||||||| |||||||||| | || ||| ||||||||||| ||||||||||| || | ||||||||||||||||| || ||| |
|
|
| T |
5368237 |
gttgaatctcgagtgcaaggtatgattcaactaatggagcaagatatccaacaatcaaatgatgttcttctactggggatgtggggtatggggggagttg |
5368336 |
T |
|
| Q |
543 |
gtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgggggcaacctgc |
642 |
Q |
| |
|
||||||| ||| | ||||||| ||||| ||| ||||| || || |||||||||||||| |||||| || | ||||||||||||||||||| | || ||| |
|
|
| T |
5368337 |
gtaaaacaaccattgccaaagctatttacaataaaattggccgcaattttgaaggtagaagcttccttgcaaatattagggaagtttgggaggaaaatgc |
5368436 |
T |
|
| Q |
643 |
tggacaagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtattgattcaggaaaagtaatattaaaggat |
742 |
Q |
| |
|
|||| ||||| |||||||| |||||||||| | |||||||| |||| | | | ||||| || ||||| ||||| | |||||| | |||||||||||| |
|
|
| T |
5368437 |
tggaaaagtgaatttacaagaacaacttctctttgatatctgcaaagatatggcaaccaaaattcaaagcattgaatgcggaaaaatcatattaaaggat |
5368536 |
T |
|
| Q |
743 |
agactttgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgctttgtgtggaagtcgtaattggtttggttcaggaa |
842 |
Q |
| |
|
||||| || ||||| |||||||| || |||| || || || || ||||| || | |||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
5368537 |
agactctgccataaaagagtattaatattactcgatgacgttaatacattggaccaactaaatgctttgtgtggaagtcgtaagtggtttggttcgggaa |
5368636 |
T |
|
| Q |
843 |
gtagaattattatcac |
858 |
Q |
| |
|
| ||||| || ||||| |
|
|
| T |
5368637 |
gcagaataatcatcac |
5368652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 334 - 858
Target Start/End: Original strand, 5423415 - 5423945
Alignment:
| Q |
334 |
ttttctttggtacactttttgtaggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgct |
433 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||| || |||||| |||||||||| || ||| | ||| || |||||||||| |||||| ||||| |
|
|
| T |
5423415 |
ttttctttggtttattttttgtaggaatgaaagtgaggctattaaggatattgttgaaaatgttacgcgtaagcttgacaagacagatttgtttattgct |
5423514 |
T |
|
| Q |
434 |
gataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagac------atccaacaatctaatgatgttctactgatagggatgtggg |
527 |
Q |
| |
|
||||||| |||||| | ||||||||||||||||||||||||||| |||| ||| || ||||||| || ||||||| || |||||||||||| |
|
|
| T |
5423515 |
aataatcctgtgggagttgaatctcgagtgcaagatatgattcaactgctggaccaagatataaaacaatcagataatgttcttctactagggatgtggg |
5423614 |
T |
|
| Q |
528 |
gtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagt |
627 |
Q |
| |
|
||||||| || |||||||||| ||| | ||||||| ||||| ||| ||||| ||||| |||||||||||||| |||||| || | |||||||||||||| |
|
|
| T |
5423615 |
gtatggggggagttggtaaaacaaccattgccaaagctatttacaataaaattggtcgcaattttgaaggtagaagcttccttgcaaatattagggaagt |
5423714 |
T |
|
| Q |
628 |
ttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtattgattcaggaaaa |
727 |
Q |
| |
|
||||| | || ||||||| ||||| |||||||| |||||||||| | |||||| | |||| | | | ||||| |||||||| ||||| | |||||| |
|
|
| T |
5423715 |
ttgggaggaaaatgctggaaaagtgaatttacaagaacaacttctctttgatatatgcaaagatatgacaaccaaaatacaaagcattgaattcggaaaa |
5423814 |
T |
|
| Q |
728 |
gtaatattaaaggatagactttgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgctttgtgtggaagtcgtaatt |
827 |
Q |
| |
|
| |||| ||||||||||| || || || |||||| | || ||||||| || || || ||||| || || |||||||||||||||||| ||| | |
|
|
| T |
5423815 |
cttgtattgaaggatagactctgccacaaaagagtactaattttacttgatgacgttaatacattggaccaactgaatgctttgtgtggaagtcataaat |
5423914 |
T |
|
| Q |
828 |
ggtttggttcaggaagtagaattattatcac |
858 |
Q |
| |
|
|||||||||| || |||||||| |||||||| |
|
|
| T |
5423915 |
ggtttggttcggggagtagaataattatcac |
5423945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 334 - 758
Target Start/End: Original strand, 5341362 - 5341786
Alignment:
| Q |
334 |
ttttctttggtacactttttgtaggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgct |
433 |
Q |
| |
|
||||||||| | || ||||| |||||||||||| || || || ||| |||| || || |||||| | || || |||||||||||||||||||||||| | |
|
|
| T |
5341362 |
ttttctttgattcattttttataggaatgaaagcgaggctatcaaggatatcgtcgaaaaagttacgcgcttgcttaacaagacagacttgtttgttgtt |
5341461 |
T |
|
| Q |
434 |
gataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctactgatagggatgtggggtatgg |
533 |
Q |
| |
|
|||||||||| ||| | ||||| ||| ||||||||||||||||| |||| || ||||||||||| |||||| ||||||| |||||||||||||||||| |
|
|
| T |
5341462 |
gataatccagcgggggttgaatcccgattgcaagatatgattcaactgcttgatatccaacaatcaaatgatattctactattagggatgtggggtatgg |
5341561 |
T |
|
| Q |
534 |
gaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgggg |
633 |
Q |
| |
|
|||| |||||||| |||||| | | |||| |||| || ||| | || | || |||||||||||||| ||| || | ||||||||||||||||||| |
|
|
| T |
5341562 |
gaggaattggtaagactaccattgtgaaagccatttataataaacttggccacaactttgaaggtaggagtttccttgcaaatattagggaagtttggga |
5341661 |
T |
|
| Q |
634 |
gcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtattgattcaggaaaagtaata |
733 |
Q |
| |
|
|||||| | |||||| || |||||||| ||| |||||| | ||||||| |||| ||| | || |||||||||| ||||| || |||||||| ||| |
|
|
| T |
5341662 |
gcaaccggatggacagttgcatttacaagaacgacttcttttcgatatctgcaaagaaacaacaacaaagatacaaaacattgagtcgggaaaagttata |
5341761 |
T |
|
| Q |
734 |
ttaaaggatagactttgtcataaga |
758 |
Q |
| |
|
|||||||||||||| |||||||||| |
|
|
| T |
5341762 |
ttaaaggatagactctgtcataaga |
5341786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 349 - 864
Target Start/End: Complemental strand, 5076050 - 5075535
Alignment:
| Q |
349 |
tttttgtaggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgctgataatccagtggga |
448 |
Q |
| |
|
|||| ||||||||||||||||||| || | |||| || || || |||||||||| || |||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
5076050 |
ttttcgtaggaatgaaagtgaagcaatcgacgatatagtggaaaatatttcacgtttgcttgacaagacagatttgttcattgctgataatccagtggga |
5075951 |
T |
|
| Q |
449 |
ctcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctactgatagggatgtggggtatgggaggtattggtaaaa |
548 |
Q |
| |
|
||||||||||||| |||||||||||||| | || ||||||||||| | ||||| | |||| ||||||| ||||||||||| || |||||||||| |
|
|
| T |
5075950 |
gtcgaatctcgagtagaagatatgattcaacggttaaacatccaacaaaccaatgaaaatgtactactagggatttggggtatgggtgggattggtaaaa |
5075851 |
T |
|
| Q |
549 |
ctaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgggggcaacctgctggaca |
648 |
Q |
| |
|
| ||| | || |||| |||| ||| ||||| |||||||| |||| ||||||||||||| || | ||||| ||||||||||||| |||| || ||||| |
|
|
| T |
5075850 |
ccaccattgcaaaagccatttacaataaaattggtcgtaaatttgcaggtaggagcttccttgcaaatatcagggaagtttgggagcaaaatgatggacc |
5075751 |
T |
|
| Q |
649 |
agtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtattgattcaggaaaagtaatattaaaggatagactt |
748 |
Q |
| |
|
|| ||||||| |||||||||| | |||||| | |||| ||| || ||||||| ||||||||| || |||||| ||||||| ||||||||| |
|
|
| T |
5075750 |
ggtttgtttacaagaacaacttctttttgatatttgcaaagatacgaaaactaagatacgaagtattgagtcgggaaaaactatattaatggatagacta |
5075651 |
T |
|
| Q |
749 |
tgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgctttgtgtggaagtcgtaattggtttggttcaggaagtagaa |
848 |
Q |
| |
|
|||||||| ||| | |||| ||||||| ||||| ||| |||||||| ||| |||||||||| |||| |||||| ||| || ||||||| ||||||| |
|
|
| T |
5075650 |
tgtcataaaagaattcttattgtacttgatgatgtgagtgaattggagcaattgaatgctttgtgcggaaatcgtaaatggcttagttcagggagtagaa |
5075551 |
T |
|
| Q |
849 |
ttattatcactaccag |
864 |
Q |
| |
|
| |||||||| ||||| |
|
|
| T |
5075550 |
taattatcacaaccag |
5075535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 349 - 858
Target Start/End: Original strand, 5394726 - 5395235
Alignment:
| Q |
349 |
tttttgtaggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgctgataatccagtggga |
448 |
Q |
| |
|
||||||||||||||||||||| || || || | |||||||| || |||||||||| || |||| |||||||||||| ||||| || |||||||||| |
|
|
| T |
5394726 |
tttttgtaggaatgaaagtgacgcaatcaatgacattgttgaaaatatttcacgtttgcttgacaaaacagacttgtttattgctaattatccagtgggc |
5394825 |
T |
|
| Q |
449 |
ctcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctactgatagggatgtggggtatgggaggtattggtaaaa |
548 |
Q |
| |
|
| |||||||| || | |||| ||||||| ||||||||||| || | | | ||||||||| |||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
5394826 |
gtggaatctcgggtacgagatgtgattcagttgctagacatacagcgacccaatgatgttgtactactagggatatggggtatgggaggtattggtaaaa |
5394925 |
T |
|
| Q |
549 |
ctaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgggggcaacctgctggaca |
648 |
Q |
| |
|
| ||||||||||||| || | ||||| ||| ||||| |||||||| |||||||||||| || | |||||||||||||| |||| |||| || ||||| |
|
|
| T |
5394926 |
ccaccttagccaaagccatatacaacagaattggtcgcaattttgagggtaggagcttccttgcaaatattagggaagtgtgggagcaaaatgttggacc |
5395025 |
T |
|
| Q |
649 |
agtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtattgattca-ggaaaagtaatattaaaggatagact |
747 |
Q |
| |
|
|| || |||||| |||||||||| | |||||| | |||| |||| ||| |||||||||| ||||| ||| |||||||| ||| |||||| |||| | |
|
|
| T |
5395026 |
ggttgacttacaaaaacaacttctctttgatatttgcaaagaaacgaagactaagatacaaaacattgagtcagggaaaagt-atactaaagggtagatt |
5395124 |
T |
|
| Q |
748 |
ttgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgctttgtgtggaagtcgtaattggtttggttcaggaagtaga |
847 |
Q |
| |
|
| ||||| |||||| || | |||||||| ||||| || || || || | |||| ||||||||||||||||||||| |||||||||| || ||| |
|
|
| T |
5395125 |
cttccataaaagagtacttctaatacttgatgatgtgaatacatttgaacaactaaatgcattgtgtggaagtcgtaattggcttggttcagggagcaga |
5395224 |
T |
|
| Q |
848 |
attattatcac |
858 |
Q |
| |
|
|| || ||||| |
|
|
| T |
5395225 |
ataatcatcac |
5395235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 353 - 849
Target Start/End: Complemental strand, 5105193 - 5104691
Alignment:
| Q |
353 |
tgtaggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgctgataatccagtgggactcg |
452 |
Q |
| |
|
||||||||||||||||| | || ||| |||||||| |||| || | | ||| || |||||||||| |||||| ||||| ||||||| |||||| | | |
|
|
| T |
5105193 |
tgtaggaatgaaagtgaggttatcaaggatattgttaacaatgtaacgcatttgcttgacaagacagatttgtttattgctaataatccggtgggagttg |
5105094 |
T |
|
| Q |
453 |
aatctcgagtgcaagatatgattcaattgctagac------atccaacaatctaatgatgttctactgatagggatgtggggtatgggaggtattggtaa |
546 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||| ||||||| |
|
|
| T |
5105093 |
aatctcgagttcaagatatgattcaactgctagaccaagatatccaacaatcaaatgatgttctcctactagggatgtggggtatgggaggagttggtaa |
5104994 |
T |
|
| Q |
547 |
aactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgggggcaacctgctgga |
646 |
Q |
| |
|
||| ||| | ||||||| ||||| ||| ||||| || | ||||||||| ||||| |||||| || | ||||||||||||||||||| |||| || ||| |
|
|
| T |
5104993 |
aacaaccattgccaaagctatttacaataaaattggccataattttgatggtagaagcttccttgcaaatattagggaagtttgggagcaaaatgttggc |
5104894 |
T |
|
| Q |
647 |
caagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtattgattcaggaaaagtaatattaaaggatagac |
746 |
Q |
| |
|
| ||| |||||||| || ||||||| | |||||||| |||| || | | | || ||||||||| |||| |||||| |||||||||||||||| |
|
|
| T |
5104893 |
cgggtgaatttacaagaaaaacttctctttgatatctgcaaagaaatgacaataaaaatacaaagtgttgaaaacggaaaaaacatattaaaggatagac |
5104794 |
T |
|
| Q |
747 |
tttgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgctttgtgtggaagtcgtaattggtttggttcaggaagtag |
846 |
Q |
| |
|
| || ||||| |||||||| || ||||||| ||||| || | || || |||||||||||||||||||| |||| ||||||||||| || ||||| |
|
|
| T |
5104793 |
tctgccataaaagagtattgattgtacttgatgatgttaatacacttgaccaactggatgctttgtgtggaagttgtaaatggtttggttcggggagtag |
5104694 |
T |
|
| Q |
847 |
aat |
849 |
Q |
| |
|
||| |
|
|
| T |
5104693 |
aat |
5104691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 320 - 637
Target Start/End: Complemental strand, 5184299 - 5183983
Alignment:
| Q |
320 |
tttgtatgtttaatttttctttggtacactttttgtaggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacag |
419 |
Q |
| |
|
|||||||||| || ||||||||||| || ||||| ||||||||||||||| || || || | |||||||| || ||| ||| ||| | |||||||| |
|
|
| T |
5184299 |
tttgtatgttcaacttttctttggtccatttttt-taggaatgaaagtgaggcaatcaaagacattgttgaaaatgttacacatttgctaggcaagacag |
5184201 |
T |
|
| Q |
420 |
acttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctactgatagg |
519 |
Q |
| |
|
| ||||| |||| |||||||| |||||| ||||||||||||| | |||| |||||||||||||||||||||||| ||| |||| |||| |||| |||| |
|
|
| T |
5184200 |
atttgttcattgcggataatccggtgggagtcgaatctcgagtacgagatgtgattcaattgctagacatccaacgatcaaatggtgttatactactagg |
5184101 |
T |
|
| Q |
520 |
gatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatatt |
619 |
Q |
| |
|
||| |||||||||||||||||||||||||| || ||||||||| |||| ||| |||| ||||| |||||||| |||||||||||| || | |||||| |
|
|
| T |
5184100 |
gatctggggtatgggaggtattggtaaaacaacgttagccaaatccatttacaatgaaattggtcgcaattttgagggtaggagcttccttgcaaatatt |
5184001 |
T |
|
| Q |
620 |
agggaagtttgggggcaa |
637 |
Q |
| |
|
||||||||||||| |||| |
|
|
| T |
5184000 |
agggaagtttgggagcaa |
5183983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 422 - 871
Target Start/End: Complemental strand, 5134157 - 5133702
Alignment:
| Q |
422 |
ttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagaca------tccaacaatctaatgatgttctactga |
515 |
Q |
| |
|
|||||| ||||| |||||||||||||| | |||||||| ||| ||||||||||||||||||||||| | ||||||| ||||||||| |||| |
|
|
| T |
5134157 |
ttgtttattgctaataatccagtgggagttgaatctcgtatgctagatatgattcaattgctagacaaagatattgaacaatcaaatgatgttatacttc |
5134058 |
T |
|
| Q |
516 |
tagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaa |
615 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||| | || |||| |||| ||| ||||| || || |||||||||||||||||||| || | || |
|
|
| T |
5134057 |
tagggatgtggggtatgggaggcgttggtaaaacaaccattgcgaaagccatttacaataaaattggccgcgattttgaaggtaggagcttccttgcaaa |
5133958 |
T |
|
| Q |
616 |
tattagggaagtttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtatt |
715 |
Q |
| |
|
||||||||||||||||| || | | ||| |||||||| |||||| |||||||||| | ||||||| |||| || | | || |||||||||| ||| |
|
|
| T |
5133957 |
tattagggaagtttgggagcgaaattttggtcaagtggaattacaagaacaacttctgtttgatatcaacaaagaaatgacaactaagatacaaaacatt |
5133858 |
T |
|
| Q |
716 |
gattcaggaaaagtaatattaaaggatagactttgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgctttgtgtg |
815 |
Q |
| |
|
|| ||||||||| || |||||||||||||| || ||||| |||||||| || ||||||| ||||| || |||| || || |||||||||||| |
|
|
| T |
5133857 |
gagtcaggaaaaaatattttaaaggatagactctggcataaaagagtattaattgtacttgatgatgtaaatactctggaacaaatgaatgctttgtgtg |
5133758 |
T |
|
| Q |
816 |
gaagtcgtaattggtttggttcaggaagtagaattattatcactaccagaaacaag |
871 |
Q |
| |
|
||||| |||| |||||||||||||| ||| |||| || || ||||||||| ||||| |
|
|
| T |
5133757 |
gaagtagtaaatggtttggttcagggagtcgaataatcattactaccagagacaag |
5133702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 334 - 672
Target Start/End: Complemental strand, 5069411 - 5069067
Alignment:
| Q |
334 |
ttttctttggtacactttttgtaggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgct |
433 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||| | || || |||||||||| || ||| | ||| || ||||| ||||||||||| ||||| |
|
|
| T |
5069411 |
ttttctttggtttattttttgtaggaatgaaagtgatgttatagaggatattgttgaaaatgttacgcgtaagcttgacaaggcagacttgtttattgct |
5069312 |
T |
|
| Q |
434 |
gataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagac------atccaacaatctaatgatgttctactgatagggatgtggg |
527 |
Q |
| |
|
|||||||||||||| | |||||||||||||| |||||||||||| |||| ||| ||||||| ||| ||||||||||| || |||||||||||| |
|
|
| T |
5069311 |
aataatccagtgggagttgaatctcgagtgcaggatatgattcaactgctggaccaagatatccaactatcaaatgatgttctccttctagggatgtggg |
5069212 |
T |
|
| Q |
528 |
gtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagt |
627 |
Q |
| |
|
|||||||||| |||||||||| ||| | ||||||| ||||| ||| ||||| || || |||||||||||||| |||||| || | |||||||||||||| |
|
|
| T |
5069211 |
gtatgggaggagttggtaaaacgaccattgccaaagctatttacaataaaattggccgcaattttgaaggtagaagcttccttgcaaatattagggaagt |
5069112 |
T |
|
| Q |
628 |
ttgggggcaacctgctggacaagtggatttacaacaacaacttct |
672 |
Q |
| |
|
||||| | |||||||| || || |||||||| |||||||||| |
|
|
| T |
5069111 |
ttgggatgagactgctggaaaattgaatttacaagaacaacttct |
5069067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 408 - 857
Target Start/End: Original strand, 5348147 - 5348602
Alignment:
| Q |
408 |
ttaacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagac------atccaacaatctaa |
501 |
Q |
| |
|
|||||||| |||| || ||| ||||| |||||||||||||| | |||||| || |||| |||||||||||| | || ||| || |||||||| || |
|
|
| T |
5348147 |
ttaacaaggcagatttatttattgctaataatccagtgggagttgaatctagattgcaggatatgattcaactactggaccaagatatacaacaatcaaa |
5348246 |
T |
|
| Q |
502 |
tgatgttctactgatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtagg |
601 |
Q |
| |
|
||||||||| || |||||||||||||||||||||| |||||||||| ||| | ||||||| ||||| ||| ||||| || || |||||||||||||| |
|
|
| T |
5348247 |
tgatgttctcctactagggatgtggggtatgggaggagttggtaaaacgaccattgccaaagctatttacaataaaattggccgcaattttgaaggtaga |
5348346 |
T |
|
| Q |
602 |
agcttcattcccaatattagggaagtttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgacca |
701 |
Q |
| |
|
|||||| || | ||||||||||||||||||| | || ||| | ||||| |||||||| |||||||||| | ||| |||| |||| | | | |||| |
|
|
| T |
5348347 |
agcttccttgcaaatattagggaagtttgggatgagactactgaaaaagtgaatttacaaaaacaacttctgtttgacatctgcaaagatatgacaacca |
5348446 |
T |
|
| Q |
702 |
agatacaaagtattgattcaggaaaagtaatattaaaggatagactttgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagtt |
801 |
Q |
| |
|
| |||||||| ||||| |||||| | ||||||||||||||||| || ||||| |||||| | || | ||||| ||||| || ||||| || || |
|
|
| T |
5348447 |
atatacaaagcattgaaagcggaaaaatcatattaaaggatagactctgccataaaagagtactaattgttcttgatgatgttaatacattggaccaatt |
5348546 |
T |
|
| Q |
802 |
ggatgctttgtgtggaagtcgtaattggtttggttcaggaagtagaattattatca |
857 |
Q |
| |
|
|||||||||| |||||| |||| ||||||||||| || ||||||||||| |||| |
|
|
| T |
5348547 |
aaatgctttgtgcggaagttgtaaatggtttggttcggggagtagaattatcatca |
5348602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 411 - 858
Target Start/End: Complemental strand, 5149219 - 5148769
Alignment:
| Q |
411 |
acaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttct |
510 |
Q |
| |
|
||||||| |||||||| |||||| |||||||||| ||| | ||| ||||||| ||||||||||||||| |||||||||||||| |||| |||||||| || |
|
|
| T |
5149219 |
acaagaccgacttgttcgttgctcataatccagtcggagttgaaactcgagtacaagatatgattcaactgctagacatccaaaaatcaaatgatgtact |
5149120 |
T |
|
| Q |
511 |
actgatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcatt |
610 |
Q |
| |
|
| | |||| |||||||||||||| || ||||| ||| | ||| | || |||| || | ||| ||||| || || ||||| ||||||||||| || | |
|
|
| T |
5149119 |
attactaggaatgtggggtatggggggaattggcaaatccaccattgcaaaagccatctacaataaaattggccgcaatttcgaaggtaggagttttcta |
5149020 |
T |
|
| Q |
611 |
cccaatattagggaagtttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcg---accaagatac |
707 |
Q |
| |
|
||||||||||| ||||||| | || || |||||| ||| |||||||||||||||||| | |||||| | || | |||| || |||| ||||| |
|
|
| T |
5149019 |
ggaaatattagggaggtttgggcgaaaaatgatggacatgtgtctttacaacaacaacttctctttgatatttgcaaggaaacgacgacaaccatgatac |
5148920 |
T |
|
| Q |
708 |
aaagtattgattcaggaaaagtaatattaaaggatagactttgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgc |
807 |
Q |
| |
|
|| | ||||| |||||||| | ||||||||||||||| ||| ||| |||||| || | ||||||| ||||| | |||||| || ||| ||| |
|
|
| T |
5148919 |
aatgcattgaggcaggaaaacatacattaaaggatagactctgtggtaaaagagtacttcttgtacttgatgatgtgagtacgttggatcaattgactgc |
5148820 |
T |
|
| Q |
808 |
tttgtgtggaagtcgtaattggtttggttcaggaagtagaattattatcac |
858 |
Q |
| |
|
|||||||||||||||| | |||||||| || ||||||||||| |||||||| |
|
|
| T |
5148819 |
tttgtgtggaagtcgtcaatggtttggctcgggaagtagaataattatcac |
5148769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 413 - 849
Target Start/End: Original strand, 5093788 - 5094224
Alignment:
| Q |
413 |
aagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctac |
512 |
Q |
| |
|
|||||||| ||||| |||||||||| || |||||| | | ||||||||||||||| | ||| || || |||||||||||||||| |||||||| || | |
|
|
| T |
5093788 |
aagacagatttgttcattgctgataaacctgtgggagttggttctcgagtgcaagatgttattgaactgttagacatccaacaatcaaatgatgtactgc |
5093887 |
T |
|
| Q |
513 |
tgatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcc |
612 |
Q |
| |
|
| | ||||||||||||||||| || ||||||||||| ||| | || |||| ||| | || |||| || |||||||||||||||||||||||| || | |
|
|
| T |
5093888 |
tacttgggatgtggggtatgggggggattggtaaaacaaccattgcaaaagctatctataatgaaattggccgtaattttgaaggtaggagcttccttgc |
5093987 |
T |
|
| Q |
613 |
caatattagggaagtttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagt |
712 |
Q |
| |
|
||| ||||||||||||||| | ||||||| ||||| |||||||| |||||||||| | ||| |||| ||||| | | | | ||| |||||||| |
|
|
| T |
5093988 |
aaatgttagggaagtttgggatgagaatgctggaaaagtgaatttacaagaacaacttctctttgacatctgtaaagatatgacaatcaaaatacaaagc |
5094087 |
T |
|
| Q |
713 |
attgattcaggaaaagtaatattaaaggatagactttgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgctttgt |
812 |
Q |
| |
|
||||| |||||| | ||||||||||||||||| || | ||| |||||| | || ||||||| ||||| || ||||| || | ||||||||| |
|
|
| T |
5094088 |
attgaaagtggaaaaatcatattaaaggatagactctgccgtaaaagagtactaattttacttgatgatgttaatacattggaccaactaaatgctttgt |
5094187 |
T |
|
| Q |
813 |
gtggaagtcgtaattggtttggttcaggaagtagaat |
849 |
Q |
| |
|
| ||||||| ||| ||||||||| | || |||||||| |
|
|
| T |
5094188 |
gcggaagtcataaatggtttggtccggggagtagaat |
5094224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 413 - 763
Target Start/End: Complemental strand, 5159756 - 5159406
Alignment:
| Q |
413 |
aagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctac |
512 |
Q |
| |
|
|||||||| ||||| ||||||||||||| |||||| | | ||||||||||||||| | ||| || |||||||||||||||| || |||||||| || | |
|
|
| T |
5159756 |
aagacagatttgttcattgctgataatcctgtgggagttggttctcgagtgcaagatgttattgaactgctagacatccaacactccaatgatgtactgc |
5159657 |
T |
|
| Q |
513 |
tgatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcc |
612 |
Q |
| |
|
| | ||||||||||||||||| || ||||| ||||| ||| | || |||| ||| | || |||| || |||||||||||||||||||||||| || | |
|
|
| T |
5159656 |
tacttgggatgtggggtatgggggggattggcaaaacaaccattgcaaaagctatctataatgaaattggccgtaattttgaaggtaggagcttccttgc |
5159557 |
T |
|
| Q |
613 |
caatattagggaagtttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagt |
712 |
Q |
| |
|
||| ||||||||||||||| | ||||||| ||||| ||||||| |||||||||| | ||| |||| |||| | | ||| ||| |||||||| |
|
|
| T |
5159556 |
aaatgttagggaagtttgggatgagaatgctggaaaagtgaatttacaggaacaacttctctttgacatctacaaagatatgacgatcaaaatacaaagc |
5159457 |
T |
|
| Q |
713 |
attgattcaggaaaagtaatattaaaggatagactttgtcataagagagta |
763 |
Q |
| |
|
||||| |||||| | ||||||||||||||||| || ||||| |||||| |
|
|
| T |
5159456 |
attgaaagtggaaaaatcatattaaaggatagactctgccataaaagagta |
5159406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 484 - 756
Target Start/End: Complemental strand, 5692295 - 5692023
Alignment:
| Q |
484 |
agacatccaacaatctaatgatgttctactgatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggt |
583 |
Q |
| |
|
||||||||||||||||||| |||||| ||| |||||||||||||| |||||||| ||||| ||||| ||| | || |||| |||| ||| ||||| || |
|
|
| T |
5692295 |
agacatccaacaatctaataatgttcgactaatagggatgtggggcatgggaggaattggcaaaaccaccattgcaaaagccatttacaataaaattggc |
5692196 |
T |
|
| Q |
584 |
cgtaattttgaaggtaggagcttcattcccaatattagggaagtttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatct |
683 |
Q |
| |
|
|| ||||||||||| ||||||||| || | ||||| |||||||||||| |||| || ||||||||| |||||| ||||||||||| || ||||| | |
|
|
| T |
5692195 |
cgcaattttgaaggaaggagcttccttgcaaatataagggaagtttggatgcaaaatgttggacaagtatctttacagcaacaacttctctccgatattt |
5692096 |
T |
|
| Q |
684 |
ttaaaggaacgtcgaccaagatacaaagtattgattcaggaaaagtaatattaaaggatagactttgtcataa |
756 |
Q |
| |
|
|||| ||| ||||||| ||||||| |||||| |||||||| | ||||| ||||||||| || ||||| |
|
|
| T |
5692095 |
gcaaagaaacaacgaccaatatacaaaacattgatgcaggaaaaaatacattaatggatagactctgccataa |
5692023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 13 - 217
Target Start/End: Original strand, 5380460 - 5380667
Alignment:
| Q |
13 |
cagaatcatagggcagatagtgttgccggtgttctatgatgttgatccttcagatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctc |
112 |
Q |
| |
|
||||| ||||| ||||||||| | ||||||||||||||||||||||| | || ||||| |||||||| |||||||||||| |||| || |||||||| |
|
|
| T |
5380460 |
cagaaccatagcacagatagtgctaccggtgttctatgatgttgatcccttggaggtacgtcaccaaactggtgagtttggacaagcttttgaaagtctc |
5380559 |
T |
|
| Q |
113 |
ttgagcagaatttcaaagaaga--aaag-cacgtccctgaaatggagagatgcacttcgtgaggctgctgagcttgctggctttgtagttccaaatttca |
209 |
Q |
| |
|
||||||| | |||| ||||||| |||| | | | |||||||||||||| || |||| || |||||||| ||||||| |||||||||| ||| | || |
|
|
| T |
5380560 |
ttgagcaaactttcgaagaagaagaaagataagacgctgaaatggagagaggctcttcatggggctgctgcctttgctggatttgtagttctaaactcca |
5380659 |
T |
|
| Q |
210 |
ggtaattt |
217 |
Q |
| |
|
|||||||| |
|
|
| T |
5380660 |
ggtaattt |
5380667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 349 - 494
Target Start/End: Original strand, 5444769 - 5444914
Alignment:
| Q |
349 |
tttttgtaggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgctgataatccagtggga |
448 |
Q |
| |
|
||||||||||||||||||||| | | || |||||||||||| |||||| ||| ||||||| |||||||||||| |||| |||||||||||||| |
|
|
| T |
5444769 |
tttttgtaggaatgaaagtgaggatgtcaaaggtattgttgacaacatttcacatttgcttaacaaaacagacttgtttattgcgaataatccagtggga |
5444868 |
T |
|
| Q |
449 |
ctcgaatctcgagtgcaagatatgattcaattgctagacatccaac |
494 |
Q |
| |
|
| |||||||||||| ||||| |||||||| |||| ||||||||| |
|
|
| T |
5444869 |
attgaatctcgagtgaaagatgtgattcaacagctacacatccaac |
5444914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 5107791 - 5107707
Alignment:
| Q |
12 |
gcagaatcatagggcagatagtgttgccggtgttctatgatgttgatccttcagatgtacgacaccaaacaggtgagtttggaaa |
96 |
Q |
| |
|
|||||| |||||||||| | ||| | ||||||||||||||||||||||| ||||| ||||| || ||||| |||||||||||||| |
|
|
| T |
5107791 |
gcagaagcatagggcaggtggtgcttccggtgttctatgatgttgatccctcagaagtacgtcatcaaactggtgagtttggaaa |
5107707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 5429836 - 5429905
Alignment:
| Q |
147 |
tgaaatggagagatgcacttcgtgaggctgctgagcttgctggctttgtagttccaaatttcaggtaatt |
216 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||| |||||||| ||||||||| ||||| ||||||||| |
|
|
| T |
5429836 |
tgaaatggagagacgcacttcgtgaggcagctgaccttgctggatttgtagttttaaattccaggtaatt |
5429905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 5149703 - 5149595
Alignment:
| Q |
22 |
agggcagatagtgttgccggtgttctatgatgttgatccttcagatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctcttgagcaga |
121 |
Q |
| |
|
||||||| | || ||||| ||||| |||||||| ||||| | || ||||| ||||||||| |||||||||| ||||| || ||||||||||||| ||| |
|
|
| T |
5149703 |
agggcagttggttttgccagtgttttatgatgtagatccatgtgaagtacgtcaccaaacaagtgagtttggcaaagcatttcaaagtctcttgaataga |
5149604 |
T |
|
| Q |
122 |
atttcaaag |
130 |
Q |
| |
|
||||||||| |
|
|
| T |
5149603 |
atttcaaag |
5149595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 411 - 486
Target Start/End: Complemental strand, 5692482 - 5692407
Alignment:
| Q |
411 |
acaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctaga |
486 |
Q |
| |
|
|||||| |||||||||||||||| || || |||||||| | ||| ||||||||||||||||||| |||||| |||| |
|
|
| T |
5692482 |
acaagaaagacttgtttgttgctaatcattcagtgggagttgaacctcgagtgcaagatatgatgcaattgttaga |
5692407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 804 - 858
Target Start/End: Complemental strand, 5068938 - 5068884
Alignment:
| Q |
804 |
atgctttgtgtggaagtcgtaattggtttggttcaggaagtagaattattatcac |
858 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||||||||||| || ||||| |
|
|
| T |
5068938 |
atgctttgtgtggaagtcgtaagtggtttggttcgggaagtagaataatcatcac |
5068884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 5093035 - 5093146
Alignment:
| Q |
19 |
catagggcagatagtgttgccggtgttctatgatgttgatccttcagatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctcttgagc |
118 |
Q |
| |
|
||||||||||||||| |||| |||||||| ||||| ||||| || || ||||| ||||| | ||| |||||||| ||||| || |||| |||||| | |
|
|
| T |
5093035 |
catagggcagatagttgtgccagtgttctacgatgtagatccctctgaagtacgtcaccagaaaggcgagtttggtaaagcatttcaaaatctcttaaat |
5093134 |
T |
|
| Q |
119 |
agaatttcaaag |
130 |
Q |
| |
|
|||||||||||| |
|
|
| T |
5093135 |
agaatttcaaag |
5093146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 5160502 - 5160391
Alignment:
| Q |
19 |
catagggcagatagtgttgccggtgttctatgatgttgatccttcagatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctcttgagc |
118 |
Q |
| |
|
||||||||||||||| ||||| |||||||| ||||| ||||| || || ||||| ||||| | ||| ||||||| ||||| || |||| |||||| | |
|
|
| T |
5160502 |
catagggcagatagttttgccagtgttctacgatgtagatccctctgaagtacgtcaccagaaaggcaagtttggtaaagcatttcaaaatctcttaaat |
5160403 |
T |
|
| Q |
119 |
agaatttcaaag |
130 |
Q |
| |
|
|||||||||||| |
|
|
| T |
5160402 |
agaatttcaaag |
5160391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 689
Target Start/End: Complemental strand, 5286275 - 5286102
Alignment:
| Q |
516 |
tagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaa |
615 |
Q |
| |
|
||||||||||||||||||| || ||||| ||||| ||| | | |||| |||| ||| || || || || |||||||| |||||||||||| || | || |
|
|
| T |
5286275 |
tagggatgtggggtatggggggaattggaaaaacaaccattacaaaagccatttacaataagattggccgcaattttgatggtaggagcttccttgcaaa |
5286176 |
T |
|
| Q |
616 |
tattagggaagtttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaag |
689 |
Q |
| |
|
||| ||||||| | ||| || ||||||||| |||| | ||||| |||||||| ||| |||||||| ||||| |
|
|
| T |
5286175 |
tataagggaagatggggcaaaaattgctggacaggtgggtctacaagaacaacttttatttgatatctgtaaag |
5286102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 5340679 - 5340758
Alignment:
| Q |
44 |
ttctatgatgttgatccttcagatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctcttgagcagaat |
123 |
Q |
| |
|
||||| ||||||||||| ||||| |||| || |||||||| |||||||||||||| || |||| ||| |||| |||||| |
|
|
| T |
5340679 |
ttctacgatgttgatccctcagaaatacgtcatcaaacaggagagtttggaaaagcatttcaaaatcttttgaacagaat |
5340758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 5076959 - 5076882
Alignment:
| Q |
147 |
tgaaatggagagatgcacttcgtgaggctgctgagcttgctggctttgtagttccaaatttcaggtaatttaattcaa |
224 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||| ||| | || ||||| || | ||| ||||||||||||| ||||| |
|
|
| T |
5076959 |
tgaaatggagagatgtacttcgtgaagctgctggcctttcaggatttgtggtcctaaaattcaggtaatttatttcaa |
5076882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 804 - 849
Target Start/End: Original strand, 5381787 - 5381832
Alignment:
| Q |
804 |
atgctttgtgtggaagtcgtaattggtttggttcaggaagtagaat |
849 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||| | |||||| |
|
|
| T |
5381787 |
atgctctgtgtggaagtcgtaaatggtttggttcagggactagaat |
5381832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 138; Significance: 1e-71; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 349 - 858
Target Start/End: Original strand, 4358093 - 4358602
Alignment:
| Q |
349 |
tttttgtaggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgctgataatccagtggga |
448 |
Q |
| |
|
||||||||||||||||||||| | || | | |||||||||| || ||| | ||||| || |||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
4358093 |
tttttgtaggaatgaaagtgaggttatcagggatattgttgaaaatgttactcgtttgcttgacaagacagacttgttcattgctgataatccagtagga |
4358192 |
T |
|
| Q |
449 |
ctcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctactgatagggatgtggggtatgggaggtattggtaaaa |
548 |
Q |
| |
|
|||| |||||||||||||||||||||||| | ||||| | |||||||| || |||| |||||| ||||||||||||| ||||| || || || |||| |
|
|
| T |
4358193 |
gtcgattctcgagtgcaagatatgattcaactcctagaaactcaacaatcaaacgatgctctactactagggatgtgggggatgggtggaatcggaaaaa |
4358292 |
T |
|
| Q |
549 |
ctaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgggggcaacctgctggaca |
648 |
Q |
| |
|
| ||| | || ||| |||| ||| ||||| ||||| |||||||||||||||||||| || ||||||||||| ||||||| |||| | ||||||| |
|
|
| T |
4358293 |
ccaccattgcaaaatccatttacaataaaattggtcgcaattttgaaggtaggagctttcttgaaaatattagggaggtttgggagcaagcctctggaca |
4358392 |
T |
|
| Q |
649 |
agtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtattgattcaggaaaagtaatattaaaggatagactt |
748 |
Q |
| |
|
| || |||||||| ||| |||| | |||||| || |||| || | |||||||||||||| ||||| ||||||||| ||||||||||| ||||| |
|
|
| T |
4358393 |
attgtatttacaagaacgacttatgaatgatattttgaaagacaccacaaccaagatacaaagcattgaatcaggaaaatctatattaaaggaaagactg |
4358492 |
T |
|
| Q |
749 |
tgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgctttgtgtggaagtcgtaattggtttggttcaggaagtagaa |
848 |
Q |
| |
|
|||||||| |||||| |||| |||||||||||||| || | ||||| || | ||||||||||||||||| |||| ||||||| | |||||||||||| |
|
|
| T |
4358493 |
tgtcataaaagagtacttattgtacttgacgatgtcaataaattggaccaactaaatgctttgtgtggaagttgtaaatggtttgctccaggaagtagaa |
4358592 |
T |
|
| Q |
849 |
ttattatcac |
858 |
Q |
| |
|
|||| ||||| |
|
|
| T |
4358593 |
ttatcatcac |
4358602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 411 - 864
Target Start/End: Complemental strand, 4126694 - 4126241
Alignment:
| Q |
411 |
acaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttct |
510 |
Q |
| |
|
|||||||||||||||| ||||||||||||| || ||| ||||||||||||||||||||||||||||| | ||||||| ||||| || ||||||||||| |
|
|
| T |
4126694 |
acaagacagacttgttcattgctgataatcctgtcggagtcgaatctcgagtgcaagatatgattcaacttctagacactcaacagtcaaatgatgttct |
4126595 |
T |
|
| Q |
511 |
actgatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcatt |
610 |
Q |
| |
|
|||| | ||||||||||| ||||| || ||||||||||| ||| | || |||| |||| ||| ||||| || || |||||||||||||||||||| || |
|
|
| T |
4126594 |
actgctggggatgtgggggatgggtggaattggtaaaaccaccattgcaaaagccatttacaataaaattggccggaattttgaaggtaggagctttctt |
4126495 |
T |
|
| Q |
611 |
cccaatattagggaagtttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaa |
710 |
Q |
| |
|
| ||||| ||||| ||||||| |||| | ||||||||||| |||||||| |||||||| | | |||||| || |||| ||| | |||||||| |||| |
|
|
| T |
4126494 |
gcaaatataagggaggtttgggagcaagtttctggacaagtgtatttacaagaacaacttatgtatgatattttcaaagaaaccacaaccaagattcaaa |
4126395 |
T |
|
| Q |
711 |
gtattgattcaggaaaagtaatattaaaggatagactttgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgcttt |
810 |
Q |
| |
|
|||||| ||||| ||| ||||||||||| ||||||||||||| ||||| || | ||||||||||||| || | ||||| || | ||||||| |
|
|
| T |
4126394 |
atattgaatcagggaaatctatattaaaggaacgactttgtcataaaagagttcttcttgtacttgacgatgtgaataaattggaccaactcaatgcttt |
4126295 |
T |
|
| Q |
811 |
gtgtggaagtcgtaattggtttggttcaggaagtagaattattatcactaccag |
864 |
Q |
| |
|
|||||||||| |||| ||||||| | |||| |||||||| || ||||| ||||| |
|
|
| T |
4126294 |
gtgtggaagttgtaaatggtttgctccagggagtagaataatcatcacgaccag |
4126241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 349 - 858
Target Start/End: Complemental strand, 4323421 - 4322912
Alignment:
| Q |
349 |
tttttgtaggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgctgataatccagtggga |
448 |
Q |
| |
|
|||||||||||| |||||||| | || ||| |||||||||| || ||| ||||||| | |||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
4323421 |
tttttgtaggaacgaaagtgaggttatcaaggatattgttgaaaatgttacacgtttactggacaagacagacttgttcgttgctgataatcctgtgggt |
4323322 |
T |
|
| Q |
449 |
ctcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctactgatagggatgtggggtatgggaggtattggtaaaa |
548 |
Q |
| |
|
|||| |||||||||||||||||||||||| | ||||||| |||||| | |||||||||||||| ||||||||||||| ||||| || ||||| |||| |
|
|
| T |
4323321 |
atcgattctcgagtgcaagatatgattcaacttctagacactcaacaaacaaatgatgttctactactagggatgtgggggatgggtggaattggaaaaa |
4323222 |
T |
|
| Q |
549 |
ctaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgggggcaacctgctggaca |
648 |
Q |
| |
|
| ||| | || || | |||| ||| ||||| ||||| |||||||||||||||||||| ||| | ||||||||||| ||||||||| || | ||| || |
|
|
| T |
4323221 |
ccaccgttgcaaaggccatttacaataaaattggtcgcaattttgaaggtaggagctttattgcaaatattagggaggtttgggggaaagattgtggtca |
4323122 |
T |
|
| Q |
649 |
agtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtattgattcaggaaaagtaatattaaaggatagactt |
748 |
Q |
| |
|
|||| || ||||| |||||||| | | |||||| ||||||| ||| | ||||||||||| | |||| ||||||| | |||||||| | ||||| |
|
|
| T |
4323121 |
agtgaatctacaagaacaacttatgtatgatatttttaaagaaaccacaaccaagatacagaacgttgaatcaggaatatctatattaaatggaagactc |
4323022 |
T |
|
| Q |
749 |
tgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgctttgtgtggaagtcgtaattggtttggttcaggaagtagaa |
848 |
Q |
| |
|
|||||||| |||||| || | ||||||||||||| || | |||| ||| | ||||||||||||||||| |||| ||||||| | |||| ||||||| |
|
|
| T |
4323021 |
tgtcataaaagagtacttcttgtacttgacgatgtgaataaactggaccagctaaatgctttgtgtggaagttgtaaatggtttgctccaggtagtagaa |
4322922 |
T |
|
| Q |
849 |
ttattatcac |
858 |
Q |
| |
|
| || ||||| |
|
|
| T |
4322921 |
taatcatcac |
4322912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 355 - 864
Target Start/End: Original strand, 4342631 - 4343140
Alignment:
| Q |
355 |
taggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgctgataatccagtgggactcgaa |
454 |
Q |
| |
|
||||||||||||||| | || || |||||||||| || ||| |||||| || |||||||||||||||| |||||||| |||| || ||| |||| |
|
|
| T |
4342631 |
taggaatgaaagtgaggttatcaaagatattgttgaaaatgttatacgtttgcttgacaagacagacttgttcattgctgattatccggtcggagtcgat |
4342730 |
T |
|
| Q |
455 |
tctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctactgatagggatgtggggtatgggaggtattggtaaaactacct |
554 |
Q |
| |
|
|||||||||||||||||||||||| | |||||| |||||||| |||||||||||||| ||||||||||||| ||||| || || || ||||| ||| |
|
|
| T |
4342731 |
tctcgagtgcaagatatgattcaacttatagacactcaacaatcaaatgatgttctactactagggatgtgggggatgggtggaatggggaaaaccacca |
4342830 |
T |
|
| Q |
555 |
tagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgggggcaacctgctggacaagtgga |
654 |
Q |
| |
|
| || |||| |||| ||| ||||| ||||| |||||||||| |||||||| || | ||||||||||| ||||||| |||| | | ||||||||| | |
|
|
| T |
4342831 |
ttgcaaaagccatttacaataaaattggtcgcaattttgaagccaggagctttcttgcaaatattagggaggtttgggagcaagtttcaggacaagtgta |
4342930 |
T |
|
| Q |
655 |
tttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtattgattcaggaaaagtaatattaaaggatagactttgtcat |
754 |
Q |
| |
|
||||||| |||||||| | |||||| || |||| ||| | ||||||||||||| ||||| | | |||| ||||||||||| || || |||||| |
|
|
| T |
4342931 |
tttacaagaacaacttatgcatgatattttcaaagaaacaactaccaagatacaaaacattgaattggaaaaacctatattaaaggaaaggctctgtcat |
4343030 |
T |
|
| Q |
755 |
aagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgctttgtgtggaagtcgtaattggtttggttcaggaagtagaattatta |
854 |
Q |
| |
|
|| ||||| || | ||||||||||||| || | ||||| || | ||||||||||||||||||||| ||||||| | |||| |||||||| || | |
|
|
| T |
4343031 |
aaaagagttcttcttgtacttgacgatgtgaataaattggatcaactaaatgctttgtgtggaagtcgtagatggtttgctccagggagtagaataatca |
4343130 |
T |
|
| Q |
855 |
tcactaccag |
864 |
Q |
| |
|
|||| ||||| |
|
|
| T |
4343131 |
tcacaaccag |
4343140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 355 - 759
Target Start/End: Original strand, 4350920 - 4351324
Alignment:
| Q |
355 |
taggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgctgataatccagtgggactcgaa |
454 |
Q |
| |
|
||||||||||||||| | || ||| ||||||||| || || ||||||| || |||||| |||||| || ||| ||||||||| |||||| ||||| |
|
|
| T |
4350920 |
taggaatgaaagtgaggttatcaagggtattgttgaaaatattacacgtttgtttgacaagatagacttattcattgttgataatcctgtgggagtcgaa |
4351019 |
T |
|
| Q |
455 |
tctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctactgatagggatgtggggtatgggaggtattggtaaaactacct |
554 |
Q |
| |
|
|||| ||||||||||||||| || | ||||||| || ||||| || ||||||||||| |||||||||||||| ||||| || || || ||| | ||| |
|
|
| T |
4351020 |
tctcaggtgcaagatatgattaaacttctagacactcaccaatcaaaagatgttctactaatagggatgtgggggatgggtggaatcggcaaatccaccg |
4351119 |
T |
|
| Q |
555 |
tagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgggggcaacctgctggacaagtgga |
654 |
Q |
| |
|
| || |||| |||| ||| ||||| || || ||||||||||||||||| || || | ||||||||||| ||| ||| |||| | |||||||| | | |
|
|
| T |
4351120 |
ttgcaaaagccatttacaataaaattggccgcaattttgaaggtaggagttttcttgcaaatattagggaggttggggagcaagtttctggacaacagca |
4351219 |
T |
|
| Q |
655 |
tttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtattgattcaggaaaagtaatattaaaggatagactttgtcat |
754 |
Q |
| |
|
||||||| |||||||| || |||||| || |||| ||| | || |||||||||| ||||| || |||||| ||||||||||| ||||| |||||| |
|
|
| T |
4351220 |
tttacaaaaacaacttatagatgatattttcaaagaaacaacaacaaagatacaaaacattgagtcgggaaaatctatattaaaggaaagactctgtcat |
4351319 |
T |
|
| Q |
755 |
aagag |
759 |
Q |
| |
|
||||| |
|
|
| T |
4351320 |
aagag |
4351324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 355 - 783
Target Start/End: Original strand, 4333241 - 4333669
Alignment:
| Q |
355 |
taggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgctgataatccagtgggactcgaa |
454 |
Q |
| |
|
|||||| |||||||| | || ||| |||||||||| || ||| ||||||| || ||||||| |||||||| |||||||| |||| || ||| ||||| |
|
|
| T |
4333241 |
taggaacgaaagtgaggtcatcaaggatattgttgaaaatgttgcacgtttgcttgacaagactgacttgttcattgctgatcatccggtaggagtcgaa |
4333340 |
T |
|
| Q |
455 |
tctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctactgatagggatgtggggtatgggaggtattggtaaaactacct |
554 |
Q |
| |
|
|||||||| ||||||||||||||| | ||||||| |||| ||| ||| | ||||||||| |||| |||||||| ||||| || ||||| ||||| || |
|
|
| T |
4333341 |
tctcgagtacaagatatgattcaacttctagacactcaactatcaaataaagttctactgctaggaatgtgggggatgggtgggattgggaaaaccacaa |
4333440 |
T |
|
| Q |
555 |
tagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgggggcaacctgctggacaagtgga |
654 |
Q |
| |
|
| || || | |||| ||| ||||| || || || ||| ||||||||||||| || | ||||||||||| ||||||| | || | ||| |||||| | |
|
|
| T |
4333441 |
ttgcgaaggccatttacaataaaattggccgcaaatttcaaggtaggagctttcttgcaaatattagggaggtttgggagaaagattatggtcaagtgaa |
4333540 |
T |
|
| Q |
655 |
tttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagtattgattcaggaaaagtaatattaaaggatagactttgtcat |
754 |
Q |
| |
|
| ||||| |||||||| | | |||||| || |||| ||| | |||||||||||| || || |||||||| ||||||||||| ||||| |||||| |
|
|
| T |
4333541 |
tctacaagaacaacttatgtatgatattttcaaagaaaccacatccaagatacaaaacatagaagcaggaaaatatatattaaaggacagactatgtcat |
4333640 |
T |
|
| Q |
755 |
aagagagtatttatcatacttgacgatgt |
783 |
Q |
| |
|
|| ||||| |||| ||||||||||||| |
|
|
| T |
4333641 |
aaaagagttcttattgtacttgacgatgt |
4333669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 355 - 549
Target Start/End: Complemental strand, 4135857 - 4135663
Alignment:
| Q |
355 |
taggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgctgataatccagtgggactcgaa |
454 |
Q |
| |
|
|||||| |||||||| | || ||| |||||||||| |||||| ||| ||| || ||||||||||| |||| ||||||| ||||||| || ||||| |
|
|
| T |
4135857 |
taggaacgaaagtgaggatatcaaggatattgttgaaaaagttacacatttgcttgacaagacagacctgttcattgctgaccatccagttagagtcgaa |
4135758 |
T |
|
| Q |
455 |
tctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctactgatagggatgtggggtatgggaggtattggtaaaac |
549 |
Q |
| |
|
|||||||||| ||||||||||||| | || |||| | | || |||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
4135757 |
tctcgagtgctagatatgattcaactactggacactccattttcaaatgatgttctactactagggatgtggggtatggaaggtattggtaaaac |
4135663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 355 - 670
Target Start/End: Original strand, 4330175 - 4330493
Alignment:
| Q |
355 |
taggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgctgataatccagtgggactcgaa |
454 |
Q |
| |
|
|||||||||||| |||| || |||||||||||||| || ||| ||| |||| || | |||| |||||| || ||||||||||||| |||| | | || |
|
|
| T |
4330175 |
taggaatgaaagagaagttatcaagaatattgttgaaaatgttacactttttcttgataagatagacttattcattgctgataatccggtggaaattaaa |
4330274 |
T |
|
| Q |
455 |
tctcgagtgcaagatatgattcaattgctagaca-tc--caacaatctaatgatgttctactgatagggatgtggggtatgggaggtattggtaaaacta |
551 |
Q |
| |
|
||||||||| |||| ||||||||| | ||||||| || |||||||| |||||||||||||| ||| ||||||||| | ||| || || || |||| | |
|
|
| T |
4330275 |
tctcgagtgtaagagatgattcaacttctagacactcatcaacaatcaaatgatgttctactcttagagatgtgggggacgggtggaatcggcaaaatca |
4330374 |
T |
|
| Q |
552 |
ccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgggggcaacctgctggacaagt |
651 |
Q |
| |
|
|| | || || | |||| || ||||| || || |||||||||||||||||||| || | ||||||||||| ||||||| |||| | || ||||||| |
|
|
| T |
4330375 |
ccattgcaaaggccatttataataaaattggccgcaattttgaaggtaggagctttcttgcaaatattagggaggtttgggagcaagtttctagacaagt |
4330474 |
T |
|
| Q |
652 |
ggatttacaacaacaactt |
670 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
4330475 |
ctatttacaagaacaactt |
4330493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 411 - 487
Target Start/End: Original strand, 25567668 - 25567744
Alignment:
| Q |
411 |
acaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagac |
487 |
Q |
| |
|
|||||||| ||||| |||||||| |||||||||||||| | ||| |||||||| || ||||||||||| |||||||| |
|
|
| T |
25567668 |
acaagacacacttgcttgttgctaataatccagtgggagttgaacctcgagtggaaaatatgattcaactgctagac |
25567744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 474 - 549
Target Start/End: Original strand, 25567811 - 25567886
Alignment:
| Q |
474 |
ttcaattgctagacatccaacaatctaatgatgttctactgatagggatgtggggtatgggaggtattggtaaaac |
549 |
Q |
| |
|
|||||||| ||||| |||| |||| || ||||||||||| |||||||||||||||||||||| ||||| ||||| |
|
|
| T |
25567811 |
ttcaattgatagactaccaagaatcaaaagatgttctacttctagggatgtggggtatgggagggattggcaaaac |
25567886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 804 - 858
Target Start/End: Original strand, 6834290 - 6834344
Alignment:
| Q |
804 |
atgctttgtgtggaagtcgtaattggtttggttcaggaagtagaattattatcac |
858 |
Q |
| |
|
||||||||||||||||||| | ||||||||||| ||||||||||| || ||||| |
|
|
| T |
6834290 |
atgctttgtgtggaagtcgcgaatggtttggttccggaagtagaataatcatcac |
6834344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 549
Target Start/End: Complemental strand, 10922 - 10784
Alignment:
| Q |
411 |
acaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttct |
510 |
Q |
| |
|
||||||||||||| || |||| ||||||||| |||||| || ||||||||||| | | | ||||| |||||| | || |||||||| ||||||||||| |
|
|
| T |
10922 |
acaagacagacttattcgttgttgataatccggtgggagtcaaatctcgagtggacaaaacgattccgttgctaaaaattcaacaatcaaatgatgttct |
10823 |
T |
|
| Q |
511 |
actgatagggatgtggggtatgggaggtattggtaaaac |
549 |
Q |
| |
|
|| ||||||| ||||||||||| || ||||||||||| |
|
|
| T |
10822 |
gctactagggatttggggtatggggggaattggtaaaac |
10784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 804 - 849
Target Start/End: Complemental strand, 10532 - 10487
Alignment:
| Q |
804 |
atgctttgtgtggaagtcgtaattggtttggttcaggaagtagaat |
849 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||| | |||||| |
|
|
| T |
10532 |
atgctttgtgtggaagtcgtgaatggtttggttcagggactagaat |
10487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 516 - 689
Target Start/End: Complemental strand, 22586467 - 22586294
Alignment:
| Q |
516 |
tagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaa |
615 |
Q |
| |
|
||||||||||||||||||| || |||| ||||| ||| | || |||| | ||| ||| || || || || | |||||||||||||||||| || | || |
|
|
| T |
22586467 |
tagggatgtggggtatggggggatttggcaaaacaaccattgcaaaagctgtttacaataagattggccgcgagtttgaaggtaggagcttccttgcaaa |
22586368 |
T |
|
| Q |
616 |
tattagggaagtttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaag |
689 |
Q |
| |
|
|||||||||||||||| |||| || | ||||| ||| ||||||| |||||||| |||||||||||| ||||| |
|
|
| T |
22586367 |
tattagggaagtttggaagcaagatggtagacaaatggttttacaagaacaacttttatctgatatctgtaaag |
22586294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 614 - 747
Target Start/End: Complemental strand, 36215946 - 36215813
Alignment:
| Q |
614 |
aatattagggaagtttgggggcaacctgctggacaagtggatttacaacaacaacttctatctgatatctttaaaggaacgtcgaccaagatacaaagta |
713 |
Q |
| |
|
|||| |||||| ||||||| | || || |||||||||| |||||||||||||||||| | |||||| | |||| |||| | ||||| |||||||||| |
|
|
| T |
36215946 |
aatactagggaggtttgggagaaaaatgttggacaagtgtctttacaacaacaacttctctttgatatttgcaaagaaacgacaaccaaaatacaaagta |
36215847 |
T |
|
| Q |
714 |
ttgattcaggaaaagtaatattaaaggatagact |
747 |
Q |
| |
|
|||| |||||||| | |||||||| |||||||| |
|
|
| T |
36215846 |
ttgaggcaggaaaaattatattaaaagatagact |
36215813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 714 - 861
Target Start/End: Complemental strand, 34727691 - 34727544
Alignment:
| Q |
714 |
ttgattcaggaaaagtaatattaaaggatagactttgtcataagagagtatttatcatacttgacgatgtcgatgagttggagcagttggatgctttgtg |
813 |
Q |
| |
|
|||| ||||||||| | ||||| |||| |||||| |||||||||| ||||| | | ||||||||||| || | |||| || ||| |||||||||| |
|
|
| T |
34727691 |
ttgaatcaggaaaaatgatattgcaggaaagacttcgtcataagaggatatttcttgtgcttgacgatgtgaataaagtggaccaattgaatgctttgtg |
34727592 |
T |
|
| Q |
814 |
tggaagtcgtaattggtttggttcaggaagtagaattattatcactac |
861 |
Q |
| |
|
|||||||| | | ||||||||| |||||||||||| || |||||||| |
|
|
| T |
34727591 |
tggaagtcatgaatggtttggtgaaggaagtagaataatgatcactac |
34727544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 349 - 477
Target Start/End: Complemental strand, 48015624 - 48015496
Alignment:
| Q |
349 |
tttttgtaggaatgaaagtgaagcgattaagaatattgttgacaaagtttcacgttttattaacaagacagacttgtttgttgctgataatccagtggga |
448 |
Q |
| |
|
|||||||||||||||||| || | ||||| |||||||||| || || |||| || || ||||||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
48015624 |
tttttgtaggaatgaaagcgaggttattaaagatattgttgaaaatattacacgattgcttgacaagacagacttgtttattgctaataattcagtgggg |
48015525 |
T |
|
| Q |
449 |
ctcgaatctcgagtgcaagatatgattca |
477 |
Q |
| |
|
| |||||| |||||| |||||||||||| |
|
|
| T |
48015524 |
attgaatcttgagtgcgagatatgattca |
48015496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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