View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13208_low_26 (Length: 288)
Name: NF13208_low_26
Description: NF13208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13208_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 13 - 271
Target Start/End: Original strand, 47183338 - 47183596
Alignment:
| Q |
13 |
aaaataggagaagataacattggatctaacaagtgattatttttatctatccacgcaaggatttgaaatctaatttggttttgaccttttatctcttccg |
112 |
Q |
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| T |
47183338 |
aaaataggagaagataacattggatctaacaagtgattatttttatctatccacgcaaggatttgaaatctaatttggttttgaccttttatctcttccg |
47183437 |
T |
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| Q |
113 |
tcattggtggagttcctatatatagatgttagatgtatatatatacactgctaagttaacgtgagaagttatcagaaatctttcatcaaaatctttctct |
212 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47183438 |
tcattgggggagttcctatatatagatgttagatgtatatatatacactgctaagttaacgtgagaagttatcagaaatctttcatcaaaatctttctct |
47183537 |
T |
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| Q |
213 |
gatcttacattcattatttccaatttcattcaatctcttggttgcaaggttatccttca |
271 |
Q |
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| T |
47183538 |
gatcttacattcattatttccaatttcattcaatctcttggttgcaaggttatccttca |
47183596 |
T |
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