View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13209_high_30 (Length: 249)
Name: NF13209_high_30
Description: NF13209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13209_high_30 |
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Alignment Details
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 37129877 - 37130116
Alignment:
| Q |
1 |
caaattgttcatcaatccttcctcgttcgcaatgtaatgtgattcattgcagttaaaaaattaacgcagtcacacagtcaaataaaacataattatttga |
100 |
Q |
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| T |
37129877 |
caaattgttcatcaatcgttcatcgttcgcaatgtaatgtgattcattgcagttaaaaaattaatgcagtcacacagtcaaacaaaacataataatttga |
37129976 |
T |
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| Q |
101 |
tcat-atcaatggtgcagatttaccttccctaatgttttcaactttaattccacaacacagaaaaataataagggtaaacatgtgtctttcttgataaat |
199 |
Q |
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|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |
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| T |
37129977 |
tcattatcaatggtgcagatttacctttcctaatgttttcaactttaattccacaacacagaaaaataataagggaaaacacgtgtctttcttgataaat |
37130076 |
T |
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| Q |
200 |
tggaaacctcattctcaaacttctacctttctcctctgtg |
239 |
Q |
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| T |
37130077 |
tgaaaacctcattctcaaatttctacctttctcctttgtg |
37130116 |
T |
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