View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13209_low_1 (Length: 1189)

Name: NF13209_low_1
Description: NF13209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13209_low_1
NF13209_low_1
[»] chr1 (61 HSPs)
chr1 (343-1176)||(2566609-2567446)
chr1 (19-267)||(2567522-2567770)
chr1 (400-565)||(8763934-8764099)
chr1 (400-565)||(49078057-49078222)
chr1 (400-564)||(5855466-5855630)
chr1 (400-563)||(41663856-41664019)
chr1 (400-566)||(17642004-17642170)
chr1 (400-565)||(43959821-43959986)
chr1 (400-565)||(9853277-9853441)
chr1 (400-560)||(9659179-9659338)
chr1 (400-564)||(11397889-11398052)
chr1 (400-564)||(18915811-18915975)
chr1 (400-564)||(26660082-26660245)
chr1 (400-566)||(26325754-26325920)
chr1 (400-564)||(5503975-5504139)
chr1 (400-564)||(10422732-10422896)
chr1 (400-564)||(33004015-33004179)
chr1 (409-564)||(10336460-10336615)
chr1 (400-535)||(18649352-18649487)
chr1 (410-565)||(33418125-33418280)
chr1 (400-566)||(50503361-50503527)
chr1 (400-564)||(34719720-34719884)
chr1 (400-564)||(40288477-40288641)
chr1 (400-567)||(50371834-50372001)
chr1 (400-565)||(12036743-12036909)
chr1 (435-564)||(48798105-48798234)
chr1 (400-564)||(2980931-2981095)
chr1 (400-471)||(4581682-4581753)
chr1 (400-539)||(16956435-16956574)
chr1 (400-566)||(15465907-15466073)
chr1 (400-561)||(10172971-10173132)
chr1 (400-560)||(14357703-14357863)
chr1 (403-571)||(17092480-17092648)
chr1 (400-564)||(31576547-31576711)
chr1 (439-566)||(34877932-34878059)
chr1 (400-564)||(51437413-51437565)
chr1 (400-509)||(37339818-37339928)
chr1 (400-565)||(15238106-15238271)
chr1 (421-565)||(31152659-31152803)
chr1 (400-560)||(32150922-32151082)
chr1 (400-480)||(44969692-44969772)
chr1 (400-554)||(45361882-45362036)
chr1 (400-469)||(6899597-6899666)
chr1 (400-564)||(30927727-30927892)
chr1 (400-560)||(32819-32979)
chr1 (400-480)||(16263573-16263653)
chr1 (400-524)||(17358471-17358595)
chr1 (400-480)||(33498839-33498919)
chr1 (433-561)||(47312932-47313059)
chr1 (490-565)||(937576-937650)
chr1 (400-483)||(45726433-45726516)
chr1 (491-560)||(892388-892457)
chr1 (400-477)||(17389802-17389879)
chr1 (400-448)||(892302-892350)
chr1 (400-480)||(50094932-50095012)
chr1 (493-564)||(8905243-8905314)
chr1 (410-565)||(14254278-14254433)
chr1 (490-565)||(41743216-41743291)
chr1 (435-509)||(28324615-28324689)
chr1 (400-441)||(35211172-35211213)
chr1 (400-469)||(38791610-38791679)
[»] scaffold0011 (2 HSPs)
scaffold0011 (400-563)||(224264-224427)
scaffold0011 (401-570)||(186458-186626)
[»] chr4 (65 HSPs)
chr4 (400-564)||(24166398-24166562)
chr4 (400-564)||(53599008-53599172)
chr4 (400-566)||(38165973-38166139)
chr4 (400-564)||(29895735-29895899)
chr4 (401-561)||(40780861-40781021)
chr4 (401-564)||(33647669-33647832)
chr4 (400-564)||(38075381-38075545)
chr4 (400-564)||(52950030-52950194)
chr4 (400-564)||(6779159-6779323)
chr4 (400-565)||(15732447-15732612)
chr4 (400-539)||(36145214-36145353)
chr4 (403-567)||(1940779-1940940)
chr4 (400-566)||(5472847-5473013)
chr4 (400-568)||(2559251-2559419)
chr4 (400-564)||(15829647-15829811)
chr4 (400-564)||(47078406-47078570)
chr4 (430-564)||(1446774-1446908)
chr4 (406-564)||(8888970-8889128)
chr4 (400-510)||(16450302-16450412)
chr4 (401-566)||(7741871-7742036)
chr4 (400-509)||(10541019-10541127)
chr4 (400-565)||(14123963-14124128)
chr4 (401-565)||(13073485-13073649)
chr4 (400-564)||(31588632-31588798)
chr4 (400-529)||(3159468-3159597)
chr4 (400-565)||(55920981-55921146)
chr4 (402-566)||(295534-295697)
chr4 (400-564)||(43458561-43458725)
chr4 (402-509)||(21429304-21429411)
chr4 (411-513)||(3507270-3507371)
chr4 (400-566)||(14858657-14858822)
chr4 (400-480)||(7246645-7246725)
chr4 (400-564)||(7000472-7000631)
chr4 (400-539)||(20128282-20128421)
chr4 (400-483)||(47682381-47682464)
chr4 (400-550)||(15839934-15840083)
chr4 (400-549)||(36262766-36262913)
chr4 (400-509)||(48015072-48015181)
chr4 (401-477)||(14859326-14859402)
chr4 (400-564)||(41339395-41339558)
chr4 (400-480)||(49260664-49260744)
chr4 (400-565)||(3574447-3574610)
chr4 (401-475)||(6032643-6032717)
chr4 (400-477)||(14567274-14567351)
chr4 (400-477)||(14597899-14597976)
chr4 (400-561)||(29588687-29588848)
chr4 (400-537)||(42722576-42722713)
chr4 (400-480)||(17080075-17080155)
chr4 (400-471)||(4738659-4738730)
chr4 (400-471)||(20421814-20421885)
chr4 (492-558)||(13552068-13552134)
chr4 (434-564)||(14567902-14568037)
chr4 (400-470)||(18531561-18531631)
chr4 (430-511)||(8064827-8064908)
chr4 (400-509)||(16645121-16645230)
chr4 (412-513)||(20532420-20532521)
chr4 (400-480)||(8424586-8424666)
chr4 (405-509)||(8824567-8824671)
chr4 (409-469)||(46108734-46108794)
chr4 (493-564)||(41162974-41163045)
chr4 (401-480)||(48352509-48352588)
chr4 (494-564)||(34667695-34667765)
chr4 (408-470)||(54946291-54946353)
chr4 (400-509)||(43468350-43468459)
chr4 (400-509)||(45721089-45721198)
[»] chr7 (52 HSPs)
chr7 (421-564)||(4973130-4973273)
chr7 (400-564)||(17748381-17748545)
chr7 (400-565)||(1605886-1606051)
chr7 (400-561)||(1797409-1797570)
chr7 (400-564)||(48804629-48804793)
chr7 (400-566)||(22973911-22974077)
chr7 (400-565)||(43861971-43862136)
chr7 (401-564)||(26423288-26423450)
chr7 (400-530)||(38578866-38578996)
chr7 (400-567)||(22993366-22993533)
chr7 (400-562)||(34659174-34659336)
chr7 (400-509)||(3353426-3353534)
chr7 (400-564)||(8734685-8734849)
chr7 (400-564)||(10047875-10048039)
chr7 (400-560)||(23658130-23658289)
chr7 (400-564)||(42210261-42210425)
chr7 (400-566)||(13095802-13095968)
chr7 (400-561)||(5069814-5069975)
chr7 (400-564)||(47341822-47341986)
chr7 (400-483)||(41945500-41945583)
chr7 (400-565)||(22573758-22573922)
chr7 (400-509)||(29151941-29152050)
chr7 (400-564)||(4195201-4195365)
chr7 (400-564)||(14650263-14650427)
chr7 (400-565)||(22268040-22268193)
chr7 (400-564)||(43346778-43346942)
chr7 (400-535)||(21190779-21190914)
chr7 (401-564)||(27875088-27875250)
chr7 (402-564)||(18785615-18785777)
chr7 (400-564)||(43925458-43925622)
chr7 (400-480)||(48551887-48551967)
chr7 (400-561)||(24969325-24969484)
chr7 (409-538)||(41267932-41268062)
chr7 (405-565)||(5039422-5039582)
chr7 (400-471)||(27028318-27028389)
chr7 (400-471)||(28744201-28744272)
chr7 (400-463)||(32768984-32769047)
chr7 (430-509)||(44336894-44336973)
chr7 (400-470)||(3603397-3603467)
chr7 (492-558)||(9685691-9685757)
chr7 (420-566)||(36619273-36619419)
chr7 (434-565)||(4228787-4228915)
chr7 (400-509)||(10317745-10317853)
chr7 (491-567)||(34127710-34127786)
chr7 (400-560)||(42032046-42032206)
chr7 (405-564)||(45960007-45960165)
chr7 (400-475)||(48244355-48244430)
chr7 (400-469)||(24983417-24983487)
chr7 (400-470)||(39474980-39475050)
chr7 (519-568)||(19914820-19914869)
chr7 (410-463)||(20097236-20097289)
chr7 (407-468)||(28396166-28396227)
[»] chr6 (40 HSPs)
chr6 (1066-1176)||(11647514-11647624)
chr6 (400-567)||(14107357-14107524)
chr6 (400-561)||(13036003-13036164)
chr6 (400-564)||(21898595-21898759)
chr6 (400-564)||(5253222-5253386)
chr6 (400-564)||(8938658-8938822)
chr6 (400-567)||(8611973-8612140)
chr6 (400-566)||(6606096-6606262)
chr6 (405-565)||(2271307-2271465)
chr6 (400-517)||(3601078-3601195)
chr6 (400-565)||(9179735-9179900)
chr6 (400-560)||(30788852-30789010)
chr6 (401-560)||(11142554-11142713)
chr6 (400-564)||(8932608-8932772)
chr6 (400-564)||(8944074-8944238)
chr6 (400-480)||(9633624-9633704)
chr6 (400-564)||(13468880-13469044)
chr6 (400-564)||(19089445-19089609)
chr6 (400-564)||(29333138-29333301)
chr6 (401-569)||(32157167-32157335)
chr6 (400-566)||(24671865-24672031)
chr6 (400-565)||(3587944-3588109)
chr6 (400-557)||(34954618-34954774)
chr6 (400-564)||(29444764-29444928)
chr6 (400-566)||(12606375-12606541)
chr6 (400-505)||(5029823-5029928)
chr6 (400-529)||(12635796-12635925)
chr6 (490-564)||(3030707-3030781)
chr6 (400-469)||(14783419-14783488)
chr6 (400-469)||(31129219-31129288)
chr6 (437-553)||(9366459-9366575)
chr6 (400-565)||(10311468-10311633)
chr6 (400-477)||(13391320-13391397)
chr6 (401-509)||(8149797-8149904)
chr6 (453-561)||(9147251-9147359)
chr6 (420-564)||(19230578-19230720)
chr6 (400-472)||(30410484-30410556)
chr6 (424-472)||(33940050-33940098)
chr6 (410-480)||(8888913-8888983)
chr6 (491-564)||(21016841-21016914)
[»] chr2 (67 HSPs)
chr2 (400-564)||(18902529-18902693)
chr2 (400-564)||(8410074-8410238)
chr2 (400-564)||(14169608-14169772)
chr2 (400-564)||(12864167-12864331)
chr2 (400-564)||(38005345-38005509)
chr2 (411-577)||(10026626-10026792)
chr2 (400-564)||(7747217-7747381)
chr2 (411-577)||(10046487-10046652)
chr2 (400-561)||(21286390-21286551)
chr2 (400-561)||(28616378-28616540)
chr2 (400-548)||(25540403-25540551)
chr2 (400-564)||(44945537-44945700)
chr2 (400-554)||(25549681-25549835)
chr2 (400-566)||(16813164-16813329)
chr2 (400-566)||(16852443-16852608)
chr2 (400-564)||(22593078-22593240)
chr2 (400-538)||(10823029-10823167)
chr2 (400-565)||(5035230-5035395)
chr2 (400-569)||(11069816-11069985)
chr2 (400-557)||(39806884-39807041)
chr2 (400-564)||(2550811-2550975)
chr2 (400-539)||(41220603-41220742)
chr2 (434-564)||(21180347-21180477)
chr2 (400-509)||(12455308-12455417)
chr2 (401-564)||(20612534-20612699)
chr2 (400-557)||(34722631-34722787)
chr2 (400-509)||(44139482-44139591)
chr2 (420-561)||(45263686-45263827)
chr2 (400-564)||(6358150-6358314)
chr2 (400-500)||(16325602-16325702)
chr2 (400-564)||(38962706-38962870)
chr2 (406-566)||(39201513-39201673)
chr2 (400-564)||(41031905-41032068)
chr2 (400-564)||(42770650-42770814)
chr2 (405-560)||(7787003-7787158)
chr2 (410-564)||(331444-331598)
chr2 (400-566)||(3643886-3644052)
chr2 (400-566)||(29422156-29422322)
chr2 (400-565)||(2528340-2528505)
chr2 (400-565)||(34130301-34130464)
chr2 (400-561)||(37560119-37560280)
chr2 (453-564)||(2149246-2149358)
chr2 (400-564)||(3811690-3811854)
chr2 (400-480)||(9360747-9360827)
chr2 (400-564)||(19976806-19976970)
chr2 (400-564)||(29653571-29653729)
chr2 (405-503)||(10669596-10669694)
chr2 (400-538)||(35946708-35946845)
chr2 (401-470)||(2784969-2785038)
chr2 (401-469)||(3042503-3042571)
chr2 (420-480)||(24179595-24179655)
chr2 (400-448)||(44548723-44548771)
chr2 (400-488)||(44773282-44773370)
chr2 (400-564)||(14853365-14853530)
chr2 (400-475)||(15234060-15234135)
chr2 (400-467)||(20116611-20116678)
chr2 (410-509)||(33634448-33634547)
chr2 (490-564)||(23500771-23500844)
chr2 (454-564)||(34356149-34356259)
chr2 (503-564)||(3598854-3598915)
chr2 (400-561)||(3848913-3849074)
chr2 (400-441)||(44023361-44023402)
chr2 (400-448)||(792213-792261)
chr2 (400-471)||(27725976-27726047)
chr2 (400-471)||(28525454-28525525)
chr2 (400-471)||(34346286-34346357)
chr2 (400-470)||(18846220-18846290)
[»] chr5 (64 HSPs)
chr5 (400-564)||(1538375-1538539)
chr5 (400-564)||(42086271-42086435)
chr5 (400-566)||(3653913-3654077)
chr5 (400-564)||(8513463-8513627)
chr5 (400-565)||(5731919-5732084)
chr5 (401-565)||(20525781-20525945)
chr5 (401-564)||(37263185-37263347)
chr5 (400-566)||(42861217-42861383)
chr5 (400-565)||(41163459-41163623)
chr5 (400-564)||(19572668-19572832)
chr5 (400-564)||(25417182-25417345)
chr5 (401-513)||(42291505-42291617)
chr5 (400-567)||(12704955-12705122)
chr5 (400-566)||(20682616-20682783)
chr5 (400-510)||(9805002-9805112)
chr5 (400-564)||(24498927-24499090)
chr5 (400-567)||(9812813-9812980)
chr5 (400-539)||(14588616-14588755)
chr5 (400-564)||(18136275-18136443)
chr5 (400-564)||(23383592-23383765)
chr5 (400-567)||(12766072-12766239)
chr5 (412-571)||(24875282-24875441)
chr5 (400-566)||(30349521-30349687)
chr5 (420-564)||(14974343-14974485)
chr5 (400-509)||(23247351-23247459)
chr5 (400-509)||(38897718-38897826)
chr5 (400-517)||(40117406-40117523)
chr5 (400-480)||(7616948-7617028)
chr5 (400-476)||(21375383-21375459)
chr5 (400-567)||(7866522-7866689)
chr5 (400-483)||(43399153-43399236)
chr5 (400-561)||(20692880-20693041)
chr5 (400-509)||(41800976-41801085)
chr5 (410-564)||(18294493-18294646)
chr5 (424-564)||(26077085-26077225)
chr5 (400-448)||(27648424-27648472)
chr5 (453-565)||(28857071-28857183)
chr5 (400-475)||(20255402-20255477)
chr5 (407-561)||(7308370-7308524)
chr5 (400-529)||(12081887-12082016)
chr5 (400-469)||(20228756-20228825)
chr5 (400-480)||(18262617-18262697)
chr5 (400-471)||(13664297-13664368)
chr5 (400-471)||(39099778-39099849)
chr5 (400-475)||(40773306-40773381)
chr5 (400-465)||(17693339-17693405)
chr5 (400-564)||(4016254-4016418)
chr5 (400-509)||(7336619-7336727)
chr5 (400-501)||(22655157-22655257)
chr5 (418-539)||(30995090-30995211)
chr5 (424-509)||(35813021-35813106)
chr5 (492-564)||(6767142-6767214)
chr5 (400-480)||(21149762-21149842)
chr5 (492-564)||(35403603-35403675)
chr5 (492-575)||(1826790-1826873)
chr5 (406-469)||(6764462-6764525)
chr5 (491-565)||(2485140-2485214)
chr5 (400-470)||(14728121-14728191)
chr5 (490-564)||(28856921-28856995)
chr5 (465-563)||(36783193-36783291)
chr5 (459-556)||(1898953-1899050)
chr5 (409-470)||(15034113-15034174)
chr5 (400-465)||(18045682-18045746)
chr5 (400-477)||(25452956-25453032)
[»] chr8 (49 HSPs)
chr8 (400-564)||(8141049-8141213)
chr8 (400-564)||(14666070-14666234)
chr8 (400-566)||(24837187-24837353)
chr8 (400-566)||(18373955-18374121)
chr8 (400-565)||(8997543-8997708)
chr8 (400-564)||(9859994-9860159)
chr8 (401-566)||(15884556-15884720)
chr8 (400-566)||(2467117-2467283)
chr8 (400-564)||(583761-583923)
chr8 (400-564)||(6100419-6100583)
chr8 (400-564)||(10927553-10927717)
chr8 (400-564)||(14846523-14846686)
chr8 (400-564)||(43027252-43027416)
chr8 (400-508)||(43032904-43033012)
chr8 (409-564)||(1012985-1013140)
chr8 (400-566)||(3418512-3418678)
chr8 (400-566)||(17981386-17981552)
chr8 (401-510)||(4479296-4479404)
chr8 (400-568)||(16893880-16894046)
chr8 (400-564)||(45521116-45521279)
chr8 (401-564)||(13085471-13085633)
chr8 (400-566)||(68097-68263)
chr8 (490-564)||(22810027-22810101)
chr8 (400-561)||(34710566-34710727)
chr8 (443-564)||(38922456-38922577)
chr8 (400-560)||(33401799-33401958)
chr8 (400-564)||(44893277-44893441)
chr8 (453-564)||(29933720-29933830)
chr8 (401-564)||(7673657-7673816)
chr8 (407-564)||(24938568-24938725)
chr8 (400-469)||(39969914-39969983)
chr8 (400-568)||(8816976-8817144)
chr8 (405-480)||(11785946-11786021)
chr8 (430-509)||(20240572-20240651)
chr8 (430-509)||(20252416-20252495)
chr8 (438-564)||(34846761-34846886)
chr8 (493-566)||(6940503-6940576)
chr8 (453-566)||(30903281-30903393)
chr8 (400-464)||(2964123-2964187)
chr8 (409-473)||(12754063-12754127)
chr8 (400-476)||(22212514-22212590)
chr8 (400-471)||(11298266-11298337)
chr8 (405-480)||(13357960-13358035)
chr8 (400-442)||(1653859-1653901)
chr8 (400-442)||(1742235-1742277)
chr8 (404-442)||(4772054-4772092)
chr8 (454-564)||(34613831-34613941)
chr8 (410-475)||(3567940-3568005)
chr8 (519-564)||(18091348-18091393)
[»] chr3 (72 HSPs)
chr3 (400-564)||(48341963-48342127)
chr3 (409-564)||(49198294-49198449)
chr3 (400-564)||(13893869-13894033)
chr3 (400-564)||(29127862-29128026)
chr3 (400-564)||(35315899-35316063)
chr3 (400-566)||(54261167-54261333)
chr3 (400-565)||(29762155-29762320)
chr3 (404-564)||(10040500-10040659)
chr3 (400-564)||(25294903-25295067)
chr3 (400-564)||(45877397-45877561)
chr3 (401-564)||(51682955-51683118)
chr3 (400-565)||(29135855-29136020)
chr3 (400-565)||(33251604-33251769)
chr3 (400-564)||(41630512-41630676)
chr3 (400-567)||(15320126-15320293)
chr3 (400-561)||(31072824-31072985)
chr3 (401-561)||(6462358-6462518)
chr3 (434-566)||(42412808-42412940)
chr3 (400-502)||(28572211-28572313)
chr3 (422-572)||(32873571-32873720)
chr3 (403-564)||(26207804-26207965)
chr3 (402-514)||(8362570-8362682)
chr3 (400-524)||(47219127-47219251)
chr3 (400-564)||(47749105-47749268)
chr3 (400-564)||(51060281-51060445)
chr3 (401-537)||(53649697-53649833)
chr3 (405-563)||(35923628-35923786)
chr3 (400-566)||(49543460-49543626)
chr3 (405-502)||(50405608-50405705)
chr3 (400-560)||(26590266-26590426)
chr3 (400-560)||(30767247-30767407)
chr3 (400-564)||(55069679-55069843)
chr3 (400-471)||(49021203-49021274)
chr3 (401-471)||(3507534-3507604)
chr3 (400-565)||(7328786-7328950)
chr3 (400-509)||(23511565-23511674)
chr3 (400-480)||(15084945-15085025)
chr3 (435-559)||(49082772-49082896)
chr3 (400-475)||(43330732-43330807)
chr3 (400-470)||(3136694-3136764)
chr3 (400-574)||(47471765-47471938)
chr3 (400-509)||(7310703-7310812)
chr3 (400-564)||(26361967-26362129)
chr3 (492-565)||(43738387-43738459)
chr3 (400-461)||(47164152-47164213)
chr3 (400-564)||(7650170-7650334)
chr3 (400-475)||(928632-928707)
chr3 (402-501)||(4638160-4638259)
chr3 (453-564)||(11687162-11687273)
chr3 (400-503)||(26043816-26043919)
chr3 (460-567)||(37092565-37092672)
chr3 (434-565)||(39849014-39849144)
chr3 (400-475)||(45450447-45450522)
chr3 (422-564)||(3755513-3755655)
chr3 (400-442)||(19147026-19147068)
chr3 (462-564)||(50682420-50682522)
chr3 (400-509)||(26923261-26923370)
chr3 (400-509)||(30045819-30045928)
chr3 (400-449)||(36043674-36043723)
chr3 (424-480)||(7648767-7648823)
chr3 (412-480)||(8164580-8164648)
chr3 (424-564)||(10855327-10855466)
chr3 (400-480)||(24506648-24506728)
chr3 (405-509)||(33688949-33689053)
chr3 (400-464)||(50753341-50753405)
chr3 (490-557)||(10043100-10043167)
chr3 (400-459)||(19873420-19873479)
chr3 (400-451)||(21325120-21325171)
chr3 (400-470)||(54237485-54237555)
chr3 (400-469)||(10043720-10043789)
chr3 (401-530)||(34662320-34662449)
chr3 (400-513)||(35998571-35998683)
[»] scaffold0006 (1 HSPs)
scaffold0006 (403-567)||(68460-68621)
[»] scaffold0029 (1 HSPs)
scaffold0029 (400-564)||(40990-41154)
[»] scaffold0209 (1 HSPs)
scaffold0209 (400-564)||(12521-12683)
[»] scaffold0170 (1 HSPs)
scaffold0170 (410-566)||(9789-9945)
[»] scaffold0002 (2 HSPs)
scaffold0002 (400-564)||(516-680)
scaffold0002 (400-550)||(319382-319532)
[»] scaffold0009 (2 HSPs)
scaffold0009 (400-509)||(42831-42940)
scaffold0009 (401-448)||(9504-9551)
[»] scaffold0016 (1 HSPs)
scaffold0016 (400-564)||(8700-8873)
[»] scaffold0291 (1 HSPs)
scaffold0291 (400-509)||(6856-6965)
[»] scaffold0010 (2 HSPs)
scaffold0010 (401-564)||(25784-25947)
scaffold0010 (400-499)||(155710-155809)
[»] scaffold0005 (4 HSPs)
scaffold0005 (434-564)||(271107-271237)
scaffold0005 (400-477)||(219402-219479)
scaffold0005 (400-477)||(250024-250101)
scaffold0005 (434-564)||(249338-249473)
[»] scaffold0316 (1 HSPs)
scaffold0316 (400-471)||(1613-1684)
[»] scaffold0041 (1 HSPs)
scaffold0041 (400-444)||(25151-25195)
[»] scaffold0004 (2 HSPs)
scaffold0004 (400-558)||(94979-95136)
scaffold0004 (400-471)||(7834-7905)
[»] scaffold0376 (1 HSPs)
scaffold0376 (400-567)||(12613-12780)
[»] scaffold0223 (1 HSPs)
scaffold0223 (400-538)||(16851-16989)
[»] scaffold0116 (1 HSPs)
scaffold0116 (409-506)||(17394-17491)
[»] scaffold0045 (1 HSPs)
scaffold0045 (400-480)||(58032-58112)
[»] scaffold0086 (1 HSPs)
scaffold0086 (400-502)||(26191-26293)
[»] scaffold0013 (1 HSPs)
scaffold0013 (519-565)||(51687-51733)
[»] scaffold0079 (1 HSPs)
scaffold0079 (400-441)||(8232-8273)


Alignment Details
Target: chr1 (Bit Score: 589; Significance: 0; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 589; E-Value: 0
Query Start/End: Original strand, 343 - 1176
Target Start/End: Complemental strand, 2567446 - 2566609
Alignment:
Q  343 cctactctttatttatttgttattttgaagttataaaaattacattttannnnnnnn-----ctttcgcaccggtttccgatccaccaaagatggacgac 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||             |||||| |||||||||||| |||||||||||||||| |    
T  2567446 cctactctttatttatttgttattttgaagttataaaaattacattttattaatttttttttctttcgtaccggtttccgacccaccaaagatggacggc 2567347  T
Q  438 taatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctcct 537  Q
    ||||||| |||| ||||||||||||||||||||| ||| |||| |||||||||  ||||||||||| ||||||||||||| |||||| |||| |||||||    
T  2567346 taatctgactcgtgagtagaggcatgcgcactggccaagcgttgttttccccgaaaatcgaacccggtattctccgaatacgtccttggaaggagctcct 2567247  T
Q  538 tgtcaatggagcccaaacaacttggtttacattttattaatttaaatatcattaaaaaa-tgtttgagatcattacatttcaaagaaaatatatgaatat 636  Q
    || || || ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2567246 tgccagtgaagcccaaacaacttgatttacattttattaatttaaatatcattaaaaaaatgtttgagatcattacatttcaaagaaaatatatgaatat 2567147  T
Q  637 ttattttgtcactttattgtaaagatatttttgttagaagaaatatatatcctataccaagnnnnnnnnnattagatctcctataccaagttattaaagt 736  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |          ||||||||||||||||||||||||||||||    
T  2567146 ttattttgtcactttgttgtaaagatatttttgttagaagaaatatatatcctataccta-agtttttttattagatctcctataccaagttattaaagt 2567048  T
Q  737 tttacatcaacttaaatcatctaaatatatttagtaaatcactcctttcaaccacatatttttcaccctcaaaatttaaacctaagatcttgtttaaaag 836  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  2567047 tttacatcaacttaaatcatctaaatatatttagtaaatcactcctttcaaccacatatttt-caccctctaaatttaaacctaagatcttgtttaaaag 2566949  T
Q  837 aaaagttcaatttcatttagattaatgttggtggaagtatttttctttttacatcaaatgttgatggaagtatttaatttaagtttcacgttagtattat 936  Q
    | ||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||| || |    
T  2566948 acaagtttaatttcacttagattaatgttggtggaagtatttttctttttacaccaaatgttgatggaagtattagatttaagtttcacgttagtgttgt 2566849  T
Q  937 tgaggttagatcaatcatataaatgagagagacggcatactcttacctaaaacttcaaacaatgaatttaaagattctttcaccttctacttttctattc 1036  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  2566848 tgaggttagatcaaccatacaaatgagagagacggcatactcttacctaaaacttcaaacaatggatttaaagattctttcaacttctacttttctattc 2566749  T
Q  1037 gacgtagaaatggaaggaataattgactggtaagttaatgtagtgtaattaaaatataaataaaatatgcatttattaattatttgaggtgagaaaagga 1136  Q
    || |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  2566748 gatgtagaaatggaacgaataattgataggtaagttaatgtagtgtaattaaaatataaataaaatatgcatatgttaattatttgaggtgagaaaagga 2566649  T
Q  1137 taacgtaaatatgacaaattatttgtttgtacaagtgatg 1176  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2566648 taacgtaaatatgacaaattatttgtttgtacaagtgatg 2566609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 2567770 - 2567522
Alignment:
Q  19 attacaaccactagaacacaaagggaaagtgtagatcaagccaaaccaacgtcaacggattggtggaattacaactacacgtgttagggcaatggttttt 118  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2567770 attacaaccactagaacactaagggaaagtgtagatcaagccaaaccaacgtcaacggattggtggaattacaactacacgtgttcgggcaatggttttt 2567671  T
Q  119 cttaacgtcgaccaatttccacattcaaattggtcaccatatattttgaaaactcattgtgctcacataatttacttcttcttcattaaattaatttatg 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2567670 cttaacgtcgaccaatttccacattcaaattggtcaccatatattttgaaaactcattgtgctcacataatttacttcttcttcattaaattaatttatg 2567571  T
Q  219 gtcgaaatttgtcaactaccgtatatgtggttggttagattttaacttc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2567570 gtcgaaatttgtcaactaccgtatatgtggttggttagattttaacttc 2567522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 8764099 - 8763934
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||| | ||||||||||||||||||| |||  ||| ||  ||| ||||| ||||    
T  8764099 ctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacgaa 8764000  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||||||||| |||  || |||||| |||| ||||||||| ||  ||||||||| |||||||||||    
T  8763999 cccgatattccccgggtacgtccttggaaggagctccttgccacgggagcccaagcaacttggttt 8763934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 49078222 - 49078057
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| | ||||| | || |||||||||| |||||  | ||||||||||||||||||| |||  ||| ||| ||| ||||||||||    
T  49078222 ctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaa 49078123  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| ||||| ||| ||| |||||| |||| ||||||||| || |||||||||| |||||||||||    
T  49078122 cccggtattccccggatacgtccttagaaggagctccttgccactggagcccaagcaacttggttt 49078057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 5855630 - 5855466
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| |||| |||| || |||||||||| | |||  | ||||||||||||||||||| ||| |||| ||   || ||||||||||    
T  5855630 ctttcgcatcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 5855531  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||||||| |||||| |||| ||||||||| || |||||||||||||||||||||    
T  5855530 cccggtattccccgaatacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 5855466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 400 - 563
Target Start/End: Original strand, 41663856 - 41664019
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||| | |||||||||||||  ||||  | ||||||||||||||||||  |||  ||| ||  ||| ||||||||||    
T  41663856 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaa 41663955  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggt 563  Q
    |||| ||||| ||| ||| |||||| |||| ||||||||| || ||||||||||||||||||||    
T  41663956 cccggtattccccggatacgtccttagaaggagctccttgccactggagcccaaacaacttggt 41664019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 17642004 - 17642170
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| |||||||| ||||||||| ||||||||||||| |||||| | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  17642004 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 17642103  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||  ||||  | |  || |||| | |||| |||||||||||| |||||||||||||||||||||||    
T  17642104 cccagtatttcctgggtacgtccgtggaaggagctccttgtcactggagcccaaacaacttggttta 17642170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 43959821 - 43959986
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||||||||||| |||| ||| ||||||||| |||||| | ||||||||||||||||||| ||| |||| ||  ||| |||||| |||    
T  43959821 ctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaattgaa 43959920  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||||||||| |||  || ||| || |||| ||| ||||| || |||||||||| |||||| ||||    
T  43959921 cccgatattccccgggtacgtcattggaaggagcaccttgccactggagcccaatcaacttagttt 43959986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 9853277 - 9853441
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| |||||| |||| || ||||||||| ||||||| |||||||| ||| | |||||||||||||||||||| ||||||| ||| |||  |||||||||    
T  9853277 cttttgcaccgatttctgacccaccaaaggtggacgattaatctggttcgtgtgtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcgaa 9853376  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| |||| ||||  ||  ||||| |||| ||||||||| || |||||||| |||||||||||||    
T  9853377 cccggtattttccgggtacatccttggaaggagctccttgccactggagccc-aacaacttggttt 9853441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 400 - 560
Target Start/End: Original strand, 9659179 - 9659338
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||| | ||||||||| ||||||||||||| |||||  | ||| ||||||||||||| ||||||||||  || ||| ||||||||||    
T  9659179 ctttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgtt-gttcccctgggaatcgaa 9659277  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaactt 560  Q
    |||| ||||| |||| || |||||| |||  ||||||||| || ||||||| || ||||||    
T  9659278 cccggtattccccgagtacgtccttagaatgagctccttgccactggagcctaagcaactt 9659338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 11397889 - 11398052
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||| | |||  | |||||||||| |||| ||| |||||||| ||  || ||| |||||||    
T  11397889 ctttcgcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgttcccctcgg-aatcgaa 11397987  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||||||| |||  ||||| |||| ||||||||| || |||||||||| ||||||||||    
T  11397988 cccggtattctccggatacatccttggaaggagctccttgccactggagcccaagcaacttggtt 11398052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 18915975 - 18915811
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||| | ||||||| | ||  ||||||||| |||||| | |||||||||||| |||||| |||  ||| ||  ||| ||||||||||    
T  18915975 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 18915876  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| |||  || |||||| |||||||||||||| || || ||||||||||||||||||    
T  18915875 cccggtattccccgggtacgtccttggaagaagctccttgccactgaagcccaaacaacttggtt 18915811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 26660245 - 26660082
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||||| |||| ||||| ||| ||  ||  || |||||||    
T  26660245 ctttcgcaccggtttccgacccaccaaaggtgg-cgactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaa 26660147  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||||||| ||| ||||||||| ||| ||| || |||||||||| ||||||||||    
T  26660146 cccggtattccccgaatacgtcattcgaagaaactctttgccactggagcccaagcaacttggtt 26660082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 26325920 - 26325754
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||  | ||||||||||||||||||  |||  ||| ||  | | ||||||||||    
T  26325920 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaa 26325821  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    ||||||||||  || ||| ||||||  ||| ||||||||| || |||||||| | ||||||||||||    
T  26325820 cccgatattcctcggatacgtccttgaaaggagctccttgccactggagccctagcaacttggttta 26325754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 5504139 - 5503975
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||| |||||  | ||||||||||| |||||  |||| |||| ||||||| | ||||||||    
T  5504139 ctttcgtaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactaatcaagcgttgttttccctgagaatcgaa 5504040  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    || ||||||| ||  ||| || ||  |||| ||||||||| || |||| ||||||||||||||||    
T  5504039 cctgatattccccagatacgttctcggaaggagctccttgccactggaacccaaacaacttggtt 5503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 10422896 - 10422732
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||||||   ||||||| ||||||||||||| |||||  | ||||||||||||||||||| |||  ||| ||   ||  | |||||||    
T  10422896 ctttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaa 10422797  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||||||| ||| || |||| ||||||||| || || ||||||||||||||||||    
T  10422796 cccggtattccccgaatacgtcattggaaggagctccttgccactgtagcccaaacaacttggtt 10422732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 33004015 - 33004179
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| ||| ||||||  | |||  |||||||| |||||| | ||||||||||||||||||| ||| | || ||| ||| || |||||||    
T  33004015 ctttcgcaccggttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaa 33004114  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
     ||||||||| ||| ||| |||||| |||| |||||||  ||| |||||||||| ||||||||||    
T  33004115 tccgatattccccggatacgtccttggaaggagctcctcatcactggagcccaagcaacttggtt 33004179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 409 - 564
Target Start/End: Complemental strand, 10336615 - 10336460
Alignment:
Q  409 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatatt 508  Q
    |||||| ||||||| ||||| ||||||| ||||| |||||  | ||||||||||||||||||||||| |||| ||  ||| |  ||||||||||||||||    
T  10336615 cggttttcgatccatcaaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatatt 10336516  T
Q  509 ctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||| ||| ||| || |||| ||||||||| || |||| |||| | |||||||||    
T  10336515 ctccggatacgtctttggaaggagctccttgccactggaacccagataacttggtt 10336460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 18649352 - 18649487
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||| |||||| |||| ||| ||| ||||||||||||   ||||||||||||||||||||||| |||| ||  ||| |  |||||||    
T  18649352 ctttcgcaccggtttccaatccactaaaggtgggcgattaatctggctcgtacgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaa 18649451  T
Q  500 cccgatattctccgaataagtccttcgaagaagctc 535  Q
    |||||||||||||  ||| |||||| |||| |||||    
T  18649452 cccgatattctccagatacgtccttggaaggagctc 18649487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 410 - 565
Target Start/End: Original strand, 33418125 - 33418280
Alignment:
Q  410 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 509  Q
    ||||||||| | ||||||| ||||||||||||| |||||| |  |||||||||||||||||| ||| |||| |   |||  ||||||||| ||| |||||    
T  33418125 ggtttccgaccgaccaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtattc 33418224  T
Q  510 tccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    ||||  || ||| || |||| ||||||||| || ||||||||||||||||||||||    
T  33418225 tccgggtacgtctttggaaggagctccttgccactggagcccaaacaacttggttt 33418280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 50503361 - 50503527
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| ||||||  | ||| |||| |||| |||||| | |||||||||||||||||||||||  ||| ||  ||| ||||||||||    
T  50503361 ctttcgcatcggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaa 50503460  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||||||||| ||| ||| ||||||  ||| ||||||| | || | ||| ||| |||||||||||||    
T  50503461 cccgatattccccggatacgtccttgaaaggagctcctcgccactagagtccatacaacttggttta 50503527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 34719884 - 34719720
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| |||||||| ||||||||| ||  ||||||||||| |||| | ||||||||||||||||||||||| |||||||  |   ||||||||||    
T  34719884 ctttcgcaccagtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgttattcccagtgggaatcgaa 34719785  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||  ||||| ||   || |||||| |||| ||||||||| || | ||||| | |||||||||||    
T  34719784 cccagtattccccaggtacgtccttggaaggagctccttgccattagagccaacacaacttggtt 34719720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 40288477 - 40288641
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| |||| ||||||||| ||||||| ||||  ||||||||| |||||| | ||||||||||||  ||||| ||| |||| ||  ||| || |||||||    
T  40288477 cttttgcactggtttccgacccaccaaggatgagcgactaatccggctcgtgtgtagaggcatgcatactggccaaccgttgttccccctggaaatcgaa 40288576  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||||||| |||||| |||  ||||||||| || | |||||||| ||||||||||    
T  40288577 cccggtattccccgaatacgtccttggaaagagctccttgccactcgagcccaagcaacttggtt 40288641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 400 - 567
Target Start/End: Original strand, 50371834 - 50372001
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| | | ||||| ||||||| ||||| ||| |||| || | || |  |||||||    
T  50371834 ctttcgcaccggtttccgatccaccaaagatgggcgactaatccggcttgtgcgtagaagcatgcgtactggccaagcgttgttcttcctgaaaatcgaa 50371933  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttac 567  Q
    | || |||| | |  |||  ||||| |||| ||||||||| || | |||||||||||| |||||||||    
T  50371934 cacgctatttttcagatacatccttagaaggagctccttgccacttgagcccaaacaatttggtttac 50372001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 12036743 - 12036909
Alignment:
Q  400 ctttcgcaccggttt-ccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcga 498  Q
    ||||||||| ||||| |||||||||||||| ||||||| |||||||||||| | ||||||||||||||||||| ||| | || ||  |||  |||||| |    
T  12036743 ctttcgcactggttttccgatccaccaaaggtggacgattaatctggctcgtgcgtagaggcatgcgcactggccaagcattgttccccctaggaatcaa 12036842  T
Q  499 acccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    ||||  |||||||    || |||||| |||| |||| |||| ||  |||||||||||||||||||||    
T  12036843 acccagtattctctaggtacgtccttggaaggagcttcttgccaccggagcccaaacaacttggttt 12036909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 435 - 564
Target Start/End: Original strand, 48798105 - 48798234
Alignment:
Q  435 gactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagct 534  Q
    |||||||| |||||  | ||||||||||||||||| ||||| |||| ||  ||| || ||||||||||||||||| ||| ||| ||| || |||| ||||    
T  48798105 gactaatccggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagct 48798204  T
Q  535 ccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||| || |||||||| ||||||||||||    
T  48798205 ccttgccactggagccccaacaacttggtt 48798234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 2980931 - 2981095
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||| ||||||| |||| ||| |||||||||||||| | |||| | |||||||||||| |||||| |||  ||| ||  | | ||||||||||    
T  2980931 ctttcgcaccgatttccgacccactaaacatggacgactaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaa 2981030  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||  ||||| ||| ||| |||| | |||| ||||||||| || | |||||||| ||||||||||    
T  2981031 cccagtattccccggatacgtccctggaaggagctccttgccactagagcccaagcaacttggtt 2981095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 4581682 - 4581753
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    ||||||||||||||||||| ||||||||| |||||||||| || |||||| | |||||||||||||||||||    
T  4581682 ctttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactgg 4581753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 400 - 539
Target Start/End: Complemental strand, 16956574 - 16956435
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||| ||||||||| ||||||||| ||   |||||||| |||||| | |||||||||||||||||||||||||||| ||  ||| | ||| ||||    
T  16956574 ctttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgttacccctgagaaccgaa 16956475  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttg 539  Q
    | || ||||| |||  || |||||| |||| |||||||||    
T  16956474 cacggtattccccgggtacgtccttggaaggagctccttg 16956435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 15466073 - 15465907
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||| | |||||||||| ||||||||| ||  |||| |||| | |||| | ||||||||||| ||||||  ||| |||| ||  ||| || |||||||    
T  15466073 ctttcgtatcggtttccgacccaccaaaggtgagcgaccaatcagactcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaa 15465974  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    || | ||||| || |||| |||||| |||| ||| | |||||| |||||||||||||||||||||||    
T  15465973 cctggtattccccaaatacgtccttggaaggagccctttgtcactggagcccaaacaacttggttta 15465907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 561
Target Start/End: Original strand, 10172971 - 10173132
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||| ||| ||||| |||||  | ||||||||||| ||||||| ||| |||| || |    |||||| |||    
T  10172971 ctttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgttctttatgggaattgaa 10173070  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
     ||| ||||| ||  ||| |||||| |||| ||| ||||| || ||||||||||||||||||    
T  10173071 tccggtattccccagatacgtccttggaaggagcaccttgccactggagcccaaacaacttg 10173132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 560
Target Start/End: Complemental strand, 14357863 - 14357703
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||| ||| | |  |||| ||||| || ||| | |||||||||||||||||||||||||||| |||     || |||||||    
T  14357863 ctttcgcaccggtttccgacccatcaatggtaaacgattaatccggttcgtgcgtagaggcatgcgcactggtcaaacgttgtttcaattggaaatcgaa 14357764  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaactt 560  Q
    || |||||| |||  ||| |||||| |||||| ||||||| || |||||| ||| ||||||    
T  14357763 cctgatattttccagatacgtccttggaagaaactccttgccactggagctcaagcaactt 14357703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 403 - 571
Target Start/End: Original strand, 17092480 - 17092648
Alignment:
Q  403 tcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaaccc 502  Q
    ||||||||||||| |||| ||||||| ||||||||||||| |||||| | |||||||||| | |||||| ||| |||| ||| ||| |  |||||||| |    
T  17092480 tcgcaccggtttctgatctaccaaaggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtttcccctgaaaatcgaactc 17092579  T
Q  503 gatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttacattt 571  Q
    ||||||  ||||||| |||| |  ||| |||| |||| || | |||  ||| |||||||||||| ||||    
T  17092580 gatatttcccgaatacgtccatgaaaggagcttcttgccactagagttcaagcaacttggtttagattt 17092648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 31576547 - 31576711
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| ||||||||||||||  || ||||||||||||||||| | |||||  | |||||||||  |||| ||| ||| | || ||| ||| | ||||||||    
T  31576547 cttttgcaccggtttccgacacatcaaagatggacgactaagccggctcatgcgtagaggcacacgcattggccaagcattgtttcccctgagaatcgaa 31576646  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| |||| || | ||| |||||| |||  ||||||||| || | |||||||||||||||||||    
T  31576647 cccggtattttcgggatacgtccttagaatgagctccttgccactagagcccaaacaacttggtt 31576711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 439 - 566
Target Start/End: Complemental strand, 34878059 - 34877932
Alignment:
Q  439 aatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctcctt 538  Q
    ||||||||||| | ||||||||||||||||||| |||  ||| ||   ||  ||||||||||| | ||||| ||||||| |||||| ||||  |||||||    
T  34878059 aatctggctcgtgtgtagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccgaatacgtccttggaaggtgctcctt 34877960  T
Q  539 gtcaatggagcccaaacaacttggttta 566  Q
    | || || ||||||||||||||||||||    
T  34877959 gccactgaagcccaaacaacttggttta 34877932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 51437565 - 51437413
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| |||| |||||||| |||||            ||||||||||||||| |||| ||  ||  ||||||||||    
T  51437565 ctttcgcaccggtttccgacccaccaaaggtggatgactaatccggctc------------atgcgcactggtcaagcgttgttccccatgggaatcgaa 51437478  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||||||||  || ||| ||||||  ||| ||||| |||||| || ||||||||||||||||||    
T  51437477 cccgatattcctcggatacgtccttgaaaggagctcattgtcactgaagcccaaacaacttggtt 51437413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 400 - 509
Target Start/End: Complemental strand, 37339928 - 37339818
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttcccc-gggaatcga 498  Q
    ||||||||||||||||| | ||||||||| ||| ||||||||| |||||| | || |||||||||||||||| ||| |||| |   |||| |||||||||    
T  37339928 ctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgtccccccctgggaatcga 37339829  T
Q  499 acccgatattc 509  Q
    ||||| |||||    
T  37339828 acccggtattc 37339818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 15238106 - 15238271
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||| |||||||||| | ||||||||| ||  |||||||| ||  ||| | |||||||||||| || ||| ||| ||||  |  ||| ||||||||||    
T  15238106 ctttcgaaccggtttccaacccaccaaaggtgagcgactaatatgattcgtgcgtagaggcatgctcattggccaagcgttgctccccctgggaatcgaa 15238205  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||||||||| |    || |||||| |||| ||||||||| || |||||||||| |||||||||||    
T  15238206 cccgatattccctaggtacgtccttggaaggagctccttgccattggagcccaagcaacttggttt 15238271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 421 - 565
Target Start/End: Complemental strand, 31152803 - 31152659
Alignment:
Q  421 caccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagt 520  Q
    |||||||| |||||||||||| || |||| | ||||||||| ||||||||  ||| |||||||  ||| || ||||||||||| ||||| | |  ||  |    
T  31152803 caccaaaggtggacgactaatttgactcgtgtgtagaggcacgcgcactgaccaagcgttattcccccgggaaatcgaacccggtattccctgggtacat 31152704  T
Q  521 ccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| |||  ||||||||| || | ||||||||||||||||||||    
T  31152703 ccttggaaagagctccttgccactagagcccaaacaacttggttt 31152659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 400 - 560
Target Start/End: Original strand, 32150922 - 32151082
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||| ||| ||| ||||| ||  ||||||||  |||||  | ||| ||||||||||||||  |||| ||| ||  ||| || |||||||    
T  32150922 ctttcgcatcggttttcgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcgaa 32151021  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaactt 560  Q
    || |||||||  |||| | |||||| |||| ||||||||| || |||||||||||||||||    
T  32151022 cctgatattcctcgaaaacgtccttggaaggagctccttgccactggagcccaaacaactt 32151082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 400 - 480
Target Start/End: Complemental strand, 44969772 - 44969692
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||||  | |||| ||||||| |||||| ||| ||||    
T  44969772 ctttcacaccggtttccgatccaccaatgatggacgactaatccggctcatgcgtaggggcatgcacactggccaagcgtt 44969692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 400 - 554
Target Start/End: Original strand, 45361882 - 45362036
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| |||| |||| || |||||||||| ||||   | |||| |||||||||||||| ||| |||| ||   || | ||||||||    
T  45361882 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgttcctcctgagaatcgaa 45361981  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaa 554  Q
    |||| ||||| | |  || |||||| |||| ||||||||| || || ||||||||    
T  45361982 cccggtattcccagggtacgtccttggaaggagctccttgccactgaagcccaaa 45362036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 6899666 - 6899597
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 469  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||| |||| | | ||| |||||||||||||    
T  6899666 ctttcgcaccggtttccgatccatcaaaggtgggcgactaatccggcttgtgcgtaaaggcatgcgcact 6899597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 30927727 - 30927892
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| ||||||||||| || ||||||||  ||||||||||||| |||||  | |||||||||||| || ||| ||| |||| ||  | | || |||||||    
T  30927727 cttttgcaccggtttctgacccaccaaaagtggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaa 30927826  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggag-cccaaacaacttggtt 564  Q
    |||||||||  ||   || |||||| |||| ||||||||| || ||||| || |||||||||||||    
T  30927827 cccgatatttcccaggtacgtccttggaaggagctccttgccactggagtccaaaacaacttggtt 30927892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 400 - 560
Target Start/End: Complemental strand, 32979 - 32819
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||| | |||||||||||||| ||||  | ||||||||||  |||||  | ||||||||||| ||||||  ||| |||| ||   || |||||||| |    
T  32979 ctttcgtatcggtttccgatccatcaaaagtagacgactaattcggctcatgcgtagaggcatgtgcactgaccaagcgttgttcctcctgggaatcgga 32880  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaactt 560  Q
    |||||||||| ||   || |||||| |||| ||||| ||| || |||||||||||||||||    
T  32879 cccgatattcccccggtacgtccttggaaggagctcattgccactggagcccaaacaactt 32819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 400 - 480
Target Start/End: Complemental strand, 16263653 - 16263573
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    ||||||||||||||||||||||| ||||  |||||||||| || ||||   | ||||||||||||||||||| ||| ||||    
T  16263653 ctttcgcaccggtttccgatccatcaaaagtggacgactattccggcttatgcgtagaggcatgcgcactggccaagcgtt 16263573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 400 - 524
Target Start/End: Original strand, 17358471 - 17358595
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||| | ||||||| || |||| ||||||| || ||||||| |||||  | ||| ||||||||||| ||||||| |||| || |||| | ||||||||    
T  17358471 ctttcgtagcggtttctgacccactaaagatgaacaactaatcgggctcatgcgtaaaggcatgcgcattggtcaagcgttgttctccctgagaatcgaa 17358570  T
Q  500 cccgatattctccgaataagtcctt 524  Q
    |||| ||||| || |||| ||||||    
T  17358571 cccggtattccccaaatacgtcctt 17358595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 400 - 480
Target Start/End: Original strand, 33498839 - 33498919
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    |||||| |||| ||| ||||||| ||||| ||||||||||||| |||||  | ||||||||||||||||||| ||| ||||    
T  33498839 ctttcgtaccgctttacgatccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgtt 33498919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 433 - 561
Target Start/End: Original strand, 47312932 - 47313059
Alignment:
Q  433 acgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaag 532  Q
    ||||||||||||||||  | |||||||||| |||||||| ||||||||  || |||  |||||| |||||| ||||| ||  ||| |||||| |||| |     
T  47312932 acgactaatctggctcatgcgtagaggcatacgcactggccaaacgtt-gttcccctaggaatcaaacccggtattccccagatacgtccttggaaggat 47313030  T
Q  533 ctccttgtcaatggagcccaaacaacttg 561  Q
    ||| ||| || ||||||||||||||||||    
T  47313031 ctcgttgccactggagcccaaacaacttg 47313059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 490 - 565
Target Start/End: Original strand, 937576 - 937650
Alignment:
Q  490 gggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||||||||||||| |||||  ||| || ||||||  ||||||||| |||||| ||||||||||||||||||||||    
T  937576 gggaatcgaacccg-tattcctcgagtacgtccttgaaagaagctcattgtcactggagcccaaacaacttggttt 937650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 483
Target Start/End: Original strand, 45726433 - 45726516
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttatt 483  Q
    |||||||||| || ||||||||||||||| || |||||||||| |||||  | |||||| ||| |||||||| |||| ||||||    
T  45726433 ctttcgcaccagtctccgatccaccaaaggtgaacgactaatccggctcatgcgtagagacatacgcactggccaaatgttatt 45726516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 491 - 560
Target Start/End: Original strand, 892388 - 892457
Alignment:
Q  491 ggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaactt 560  Q
    ||||||||||||| ||||| ||||||| ||||||  ||| ||||||||| || || ||||||||||||||    
T  892388 ggaatcgaacccggtattccccgaatacgtccttgaaaggagctccttgccactgaagcccaaacaactt 892457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 17389879 - 17389802
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 477  Q
    ||||||||||||||||||| ||| ||   ||||||||||||||  ||||  | || ||||||||||||||||||||||    
T  17389879 ctttcgcaccggtttccgacccatcagcaatggacgactaatccagctcatgcgtggaggcatgcgcactggtcaaac 17389802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 400 - 448
Target Start/End: Original strand, 892302 - 892350
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctc 448  Q
    ||||||||||| ||||||||||||||||| ||| ||||||||| |||||    
T  892302 ctttcgcaccgatttccgatccaccaaaggtgggcgactaatccggctc 892350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 400 - 480
Target Start/End: Complemental strand, 50095012 - 50094932
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    |||| |||||||||||||| |||| || | ||||||||||||| | |||  | ||||| ||||||| ||||||||||||||    
T  50095012 cttttgcaccggtttccgacccactaatggtggacgactaatccgactcatgcgtagaagcatgcgtactggtcaaacgtt 50094932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 493 - 564
Target Start/End: Original strand, 8905243 - 8905314
Alignment:
Q  493 aatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||| ||||||||||||||| ||| ||| || |||| ||||||||| || | ||| |||||||||||||||    
T  8905243 aatcgtacccgatattctccggatacgtcattggaaggagctccttgccactagagtccaaacaacttggtt 8905314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 410 - 565
Target Start/End: Original strand, 14254278 - 14254433
Alignment:
Q  410 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 509  Q
    ||||||||| ||| ||||| ||||||||||||| |||||  | ||| ||||||||| ||||| ||| |||| ||  ||| |  |||||||| || |||||    
T  14254278 ggtttccgacccatcaaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattc 14254377  T
Q  510 tccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
     ||||||| |||||| |||  || |||||| |  ||||| | || |||||||||||    
T  14254378 cccgaatacgtccttggaatgagttccttgcccctggaggctaagcaacttggttt 14254433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 490 - 565
Target Start/End: Complemental strand, 41743291 - 41743216
Alignment:
Q  490 gggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||||||||||||| |||||  || ||| |||||| |||| ||||||||| ||  ||||||||| |||||||||||    
T  41743291 gggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgccaccggagcccaagcaacttggttt 41743216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 435 - 509
Target Start/End: Original strand, 28324615 - 28324689
Alignment:
Q  435 gactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 509  Q
    |||||||| |||||  | ||||||||||||||||||  |||  ||| ||| ||| ||||||||||||||||||||    
T  28324615 gactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgtttccccggggaatcgaacccgatattc 28324689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 400 - 441
Target Start/End: Original strand, 35211172 - 35211213
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaat 441  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||    
T  35211172 ctttcacaccggtttccgacccaccaaaggtggacgactaat 35211213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 38791610 - 38791679
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 469  Q
    |||||| | ||||||  |||||| ||||||||||||||||||  |||||  | |||||||||||||||||    
T  38791610 ctttcgtatcggtttttgatccatcaaagatggacgactaattcggctcatgcgtagaggcatgcgcact 38791679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 88; Significance: 1e-41; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 400 - 563
Target Start/End: Complemental strand, 224427 - 224264
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| | ||||||| ||| |||||| |||||||||||| |||| | || |||||    
T  224427 ctttcgcaccggtttccgacccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcactgatcaaacgttattctccctgagattcgaa 224328  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggt 563  Q
    |||||||||||||||||| |||||| ||||| |||||||| || | |||| ||| |||||||||    
T  224327 cccgatattctccgaatacgtccttagaagatgctccttgccactagagctcaagcaacttggt 224264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 401 - 570
Target Start/End: Complemental strand, 186626 - 186458
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||| ||||||||||||| |||| ||||||| |||||||||| |||||| | ||||||||||| ||||||  ||||| ||||| | ||| | ||||||||    
T  186626 tttcacaccggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcatgtgcactgaccaaacattattct-ccctgaaatcgaac 186528  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttacatt 570  Q
    |||||||||||| ||||  ||||| ||||  |||||||| || | |||| ||| ||||||| ||||||||    
T  186527 ccgatattctccaaatacatccttagaaggtgctccttgccactagagctcaaccaacttgatttacatt 186458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 2e-37; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 24166562 - 24166398
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||||||| ||||| |||  ||||||||||||||| | ||||||||||||||||||| |||||||| ||| ||  ||||||||||    
T  24166562 ctttcgcaccggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaa 24166463  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||  ||||| |||| || |||||| |||| ||||||||| || |||||||||| ||||||||||    
T  24166462 cccagtattccccgagtacgtccttggaaggagctccttgccactggagcccaatcaacttggtt 24166398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 53599172 - 53599008
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||||||||||| |||| || |||| ||||| |||||  | ||||||||||||||||||| |||||||| ||   || ||||||||||    
T  53599172 ctttcgcaccggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaa 53599073  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| |||  || |||||| |||| ||||||||| ||||||||||||||||||||||||    
T  53599072 cccggtattccccgggtacgtccttggaaggagctccttgccaatggagcccaaacaacttggtt 53599008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 38166139 - 38165973
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||| | |||||| |||||||||||| ||| |||| ||  ||| ||||||| ||    
T  38166139 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaa 38166040  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||  ||||| ||| ||| |||||| |||| ||||||||| || |||||||||||||||||||||||    
T  38166039 cccagtattccccggatacgtccttggaaggagctccttgccagtggagcccaaacaacttggttta 38165973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 29895899 - 29895735
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  29895899 ctttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 29895800  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||| ||| |||||| |||| ||||||||| || |||||||||| ||||||||||    
T  29895799 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 29895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 401 - 561
Target Start/End: Original strand, 40780861 - 40781021
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||||||||||||| ||||||||| ||||||||||||| |||||  | ||||||||||||||||||  ||| |||| ||  ||  | |||||||||    
T  40780861 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttccccttgagaatcgaac 40780960  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    |||||||| |||||||| ||||||  ||||||||||||| || ||||||||| ||||||||    
T  40780961 ccgatattttccgaatacgtccttaaaagaagctccttgccactggagcccagacaacttg 40781021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 401 - 564
Target Start/End: Complemental strand, 33647832 - 33647669
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||| | ||||||| ||| ||||||||||| |||| || |||| || ||||||||    
T  33647832 tttcgcaccggtttccgatccaccaaagatgaacgactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaatcgaac 33647733  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||| ||||| ||  ||| ||||||  ||| ||||||||| || | |||||||| ||||||||||    
T  33647732 ccggtattccccagatacgtccttgaaaggagctccttgccactagagcccaagcaacttggtt 33647669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 38075545 - 38075381
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| ||||||||| ||||| | ||||  |||||  | ||||||||||||||||||| ||| |||| ||| ||| | ||||||||    
T  38075545 ctttcgcatcggtttccgacccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaa 38075446  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||||||||||| |||||| |||| | ||||||| |  |||||||||||||||||||||    
T  38075445 cccggtattctccgaatacgtccttggaaggaactccttgccgctggagcccaaacaacttggtt 38075381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 52950194 - 52950030
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| ||||||||| |||||||||||||||| ||  | |||||| |||||||||||| ||| |||| ||  ||| ||||||||||    
T  52950194 ctttcgcatcggtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgttccccctgggaatcgaa 52950095  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||| ||   || |||||| |||| ||||||||| || | |||||||||||||||||||    
T  52950094 cccgatattccccaggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 52950030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 6779323 - 6779159
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| ||| ||||||| |||||||| ||||||||||||| |||||  |  |||||||||||||||||| ||   ||| ||  ||| ||||||||||    
T  6779323 ctttcgcatcgggttccgattcaccaaaggtggacgactaatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaa 6779224  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||||||   || |||||| |||||||||||||| || |||||||||||||||||||||    
T  6779223 cccggtattctccaggtacgtccttggaagaagctccttgccactggagcccaaacaacttggtt 6779159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 15732447 - 15732612
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||||||||||||||||  |||||||||| || || | ||||||||||| ||||||| |||  ||| ||  ||    ||||||||    
T  15732447 ctttcgcaccggtttccgatccaccaaagatgagcgactaatctagcccgtgcgtagaggcatgtgcactggccaagtgttgttccccatatgaatcgaa 15732546  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| ||||||||| ||| |||||| ||||||  | |||| || ||||||||||||||||||||||    
T  15732547 cccggtattctccggatacgtccttggaagaattttcttgccactggagcccaaacaacttggttt 15732612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 400 - 539
Target Start/End: Original strand, 36145214 - 36145353
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||||||| || ||||| ||||||||||||| |||||  | |||||||||||||||||| |||| |||| ||| ||| ||||||||||    
T  36145214 ctttcgcaccggtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaa 36145313  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttg 539  Q
    |||| ||||| |||  || |||||| |||  |||||||||    
T  36145314 cccggtattccccgggtacgtccttggaatgagctccttg 36145353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 1940779 - 1940940
Alignment:
Q  403 tcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaaccc 502  Q
    |||||||||||| ||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||    ||| |||| ||  ||| |||||||||||||    
T  1940779 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaaccc 1940875  T
Q  503 gatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttac 567  Q
    ||||||  |||  || |||||| |||| ||||||||| || | ||||||||||||||||||||||    
T  1940876 gatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtttac 1940940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 5472847 - 5473013
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| |||| ||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||||| ||| |||| ||| ||| | ||||| ||    
T  5472847 ctttcgcaccagttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcaaa 5472946  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    || | ||||| ||| ||| ||||||  ||  ||||||||| || ||||||||||||||||| |||||    
T  5472947 cctggtattccccggatacgtccttgaaatgagctccttgccactggagcccaaacaacttagttta 5473013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 400 - 568
Target Start/End: Complemental strand, 2559419 - 2559251
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||| |||| | | ||||||||||||||||||| ||| |||| ||   ||  | |||||||    
T  2559419 ctttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaa 2559320  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttaca 568  Q
     ||| ||||| ||   || |||||| |||| ||||| ||| || |||||||||||||||||||||||||    
T  2559319 tccggtattccccaggtacgtccttggaaggagctcgttgccactggagcccaaacaacttggtttaca 2559251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 15829811 - 15829647
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| |||||||||| | |||| |||||||| |||||  |  |||| ||||||||||||| |||  |||  || ||| |  |||| ||    
T  15829811 ctttcgcaccggtttctgatccaccaatggtggaggactaatccggctcatgcctagaagcatgcgcactggccaagtgttgattcccctgaaaatcaaa 15829712  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |  ||||||||||| ||| ||||||  |||||||||||||||| |||||||||||||||||||||    
T  15829711 ctggatattctccggatacgtccttgaaagaagctccttgtcactggagcccaaacaacttggtt 15829647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 47078570 - 47078406
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||| ||||||||| ||||||| | ||  ||||||||| |||||| | ||||||||||| ||||||| ||| |||| ||  ||| ||||||||||    
T  47078570 ctttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaa 47078471  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| |||  || |||||| |||| ||||||||| || |||| ||||| ||||||||||    
T  47078470 cccggtattccccgggtacgtccttggaaggagctccttgccactggaacccaagcaacttggtt 47078406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 430 - 564
Target Start/End: Complemental strand, 1446908 - 1446774
Alignment:
Q  430 tggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaag 529  Q
    ||||||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| |||||||||||||| ||||| ||| ||| |||||| ||||    
T  1446908 tggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaag 1446809  T
Q  530 aagctccttgtcaatggagcccaaacaacttggtt 564  Q
     ||||||||| || |||||||||| ||||||||||    
T  1446808 gagctccttgccactggagcccaagcaacttggtt 1446774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 406 - 564
Target Start/End: Complemental strand, 8889128 - 8888970
Alignment:
Q  406 caccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgat 505  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||  | |||||| |||||||||||  |||  ||| ||  |||  ||||||||||||| |    
T  8889128 caccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggt 8889029  T
Q  506 attctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||| ||| |||||| |||| ||||||||| |  | |||||||||||||||||||    
T  8889028 attccccggatacgtccttagaaggagctccttgccgctagagcccaaacaacttggtt 8888970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 400 - 510
Target Start/End: Complemental strand, 16450412 - 16450302
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| | ||||||| |||||||||||||||||||  | ||||||||||| ||||||| ||| |||| ||  ||| ||||||||||    
T  16450412 ctttcgcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaa 16450313  T
Q  500 cccgatattct 510  Q
    ||| |||||||    
T  16450312 cccaatattct 16450302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 401 - 566
Target Start/End: Complemental strand, 7742036 - 7741871
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||| ||| | ||||||||||| ||||||| ||| |||| ||  ||| | || | ||||    
T  7742036 tttcgcaccagttttcgattcaccaaagatggacgactaatctggatcgtgcgtagaggcatgtgcactggccaagcgttgttacccctgagattggaac 7741937  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||||||||  |||||| || |||  ||| ||||||||| || | |||||||| |||| |||||||    
T  7741936 ccgatattcctcgaatacgtacttgaaaggagctccttgccactagagcccaagcaacgtggttta 7741871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 400 - 509
Target Start/End: Complemental strand, 10541127 - 10541019
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||||||| ||||| ||| ||| |||||||||||| | |||||||||||| |||||| ||| |||| ||| ||| || |||||||    
T  10541127 ctttcgcaccggtttccgatccatcaaaggtgg-cgattaatctggctcgtgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatcgaa 10541029  T
Q  500 cccgatattc 509  Q
    ||||||||||    
T  10541028 cccgatattc 10541019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 14124128 - 14123963
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||| | ||||||| | ||  ||||||||| |||||| | ||||||||||||||||||| |||| ||| ||  ||| ||||||||||    
T  14124128 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaa 14124029  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    || | |||||  | | || || ||| |||| |||| |||| || ||||||||||||||||||||||    
T  14124028 cctggtattcctcaagtacgttcttggaaggagcttcttgccattggagcccaaacaacttggttt 14123963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 401 - 565
Target Start/End: Complemental strand, 13073649 - 13073485
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||||||||||||| ||||||||| |  ||||||||||||| ||  | ||||||| ||||||||||| ||||| || ||  ||  |||||||||||    
T  13073649 tttcgcaccggtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactggccaaacattgttccccatgggaatcgaac 13073550  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
     || ||||||||   || |||||| |||| ||||| ||| || | ||||||||||||||||||||    
T  13073549 tcggtattctccaggtacgtccttggaaggagctcattgccactagagcccaaacaacttggttt 13073485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 31588798 - 31588632
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaa--cgttattttccccgggaatcg 497  Q
    |||||||| |||||||||||||||||||  ||  ||||||||| |||||  | |||||| |||||||||||| |||   |||| ||| | | |||||||     
T  31588798 ctttcgcatcggtttccgatccaccaaaagtgagcgactaatccggctcatgcgtagagacatgcgcactggccaagagcgttgtttcctctgggaatca 31588699  T
Q  498 aacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||| |||||| ||||||| |||||| |||  ||||||||| || || ||||||||||||||||||    
T  31588698 aacccaatattccccgaatacgtccttagaacgagctccttgacactgaagcccaaacaacttggtt 31588632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 3159468 - 3159597
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| |||||||||||||| ||||||| | ||  |||||||||||||||| | ||||||||||||||||||| ||| |||| ||  ||| || | |||||    
T  3159468 cttttgcaccggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaagtcgaa 3159567  T
Q  500 cccgatattctccgaataagtccttcgaag 529  Q
    |||| ||||||||| ||| |||||| ||||    
T  3159568 cccggtattctccggatacgtccttggaag 3159597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 55921146 - 55920981
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||  ||| ||||| |||||    ||||||||||||||||||  |||  ||| ||  ||| ||||||||||    
T  55921146 ctttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaa 55921047  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| ||||| |||  |  |||||| |||| ||||||||| || |||||||||| |||||||||||    
T  55921046 cccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttggttt 55920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 402 - 566
Target Start/End: Original strand, 295534 - 295697
Alignment:
Q  402 ttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacc 501  Q
    ||||||||||||||  | ||||||| | |||||||||||||||| ||| | ||||||||||||||||||| ||||||||  || | | |||||||||| |    
T  295534 ttcgcaccggtttcaaacccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgtt-gttcctctgggaatcgaatc 295632  T
Q  502 cgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
     | ||||| ||| ||| |||||| ||||  | |||||| || |||||||||||||| ||| ||||    
T  295633 tggtattccccggatacgtccttagaaggtgttccttgccactggagcccaaacaatttgattta 295697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 43458725 - 43458561
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| ||||||||||  || ||||| ||||||||||||| ||||||   ||||||||||||||||||| ||| |||| ||   || ||||||||||    
T  43458725 ctttcgcaacggtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaa 43458626  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
     ||  ||||| || |||| |||||| |||  |||| |||| || |||||||||| ||||||||||    
T  43458625 tccagtattccccaaatacgtccttggaatgagcttcttgccactggagcccaagcaacttggtt 43458561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 402 - 509
Target Start/End: Complemental strand, 21429411 - 21429304
Alignment:
Q  402 ttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacc 501  Q
    ||||||||||||||||| ||||||||| |||||||||| |||| |||| | |||||||||||||||||||  ||||||| ||  |||    |||||||||    
T  21429411 ttcgcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatcgaacc 21429312  T
Q  502 cgatattc 509  Q
    ||||||||    
T  21429311 cgatattc 21429304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 411 - 513
Target Start/End: Complemental strand, 3507371 - 3507270
Alignment:
Q  411 gtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattct 510  Q
    |||||||||||||||||| ||||||||||||| |||||| | ||||||||| ||||||| | ||| ||||  || ||  |||||||||||||||||||||    
T  3507371 gtttccgatccaccaaaggtggacgactaatccggctcgtgtgtagaggcacgcgcactagccaagcgtt-gttcccttgggaatcgaacccgatattct 3507273  T
Q  511 ccg 513  Q
    |||    
T  3507272 ccg 3507270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 14858822 - 14858657
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || ||| ||||| ||||||| ||||||| ||||   |||||| |||||||||||||||| | ||  |  ||| ||||| ||||    
T  14858822 ctttcgcaccggtttctgacccatcaaaggtggacgaataatctgactcgtacgtagagacatgcgcactggtcaagc-ttgatccccctgggaaccgaa 14858724  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||| |||||||||  ||  ||||| |||| || || ||||||||||||| ||||||||||| ||||    
T  14858723 cccggtattctccgggtacatccttggaaggagttcattgtcaatggagctcaaacaacttgattta 14858657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 480
Target Start/End: Original strand, 7246645 - 7246725
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||||||||||| ||| ||||    
T  7246645 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgtt 7246725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 7000631 - 7000472
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| | ||||||||||| ||  |||||||||||||||| | |||||||||    || ||| ||| |||| || | || ||||||||||    
T  7000631 ctttcgcaccggttttcaatccaccaaag-tgagcgactaatctggctcgtgcgtagaggca----cattggccaagcgttgttcttcctgggaatcgaa 7000537  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    | || ||||| |||| || |||||| |||| |||| |||| || || ||||||||||||||||||    
T  7000536 ctcggtattccccgagtacgtccttggaaggagcttcttgccactgtagcccaaacaacttggtt 7000472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 400 - 539
Target Start/End: Complemental strand, 20128421 - 20128282
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || ||||||| | |||||||||||||| ||||| | ||| ||||||||||||||| ||| | || ||  ||| | ||||||||    
T  20128421 ctttcgcaccggtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgagaatcgaa 20128322  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttg 539  Q
    |||  ||||| ||| ||| |||||| |||| | |||||||    
T  20128321 cccagtattccccggatacgtccttggaaggaactccttg 20128282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 400 - 483
Target Start/End: Original strand, 47682381 - 47682464
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttatt 483  Q
    ||||||||||||||||||| ||||||||| ||| ||||||| | |||||| | |||||| |||| ||||||| |||||||||||    
T  47682381 ctttcgcaccggtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcactggccaaacgttatt 47682464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 400 - 550
Target Start/End: Original strand, 15839934 - 15840083
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||| ||||||| | | | |||||| || ||||||||| |||||  | ||||||||||||||||||| ||||||||||| |  |  |||||||||    
T  15839934 ctttcgcactggtttccaacctatcaaagaagggcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttattct-tctaggaatcgaa 15840032  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcc 550  Q
    |||| ||||| || | || |||||| |||| ||||||||| || |||||||    
T  15840033 cccggtattccccaagtacgtccttggaaggagctccttgccactggagcc 15840083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 400 - 549
Target Start/End: Original strand, 36262766 - 36262913
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||  |||||| || ||||||||| ||| ||||||||| | |||| | ||||||||||| ||||||| ||| |||  | ||||| ||||||||||    
T  36262766 ctttcgcattggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgt--tgttccctgggaatcgaa 36262863  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagc 549  Q
    |||| |||||||||  || |||||| |||| |||| |||| || ||||||    
T  36262864 cccggtattctccgggtacgtccttggaaggagcttcttgccactggagc 36262913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 400 - 509
Target Start/End: Original strand, 48015072 - 48015181
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||||||| ||||  ||| | ||||||| |||||| | |||||||| |||||||||| ||| |||| ||  | | ||||||||||    
T  48015072 ctttcgcaccggtttccgatccatcaaaattgggctactaatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatcgaa 48015171  T
Q  500 cccgatattc 509  Q
    |||| |||||    
T  48015172 cccggtattc 48015181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 401 - 477
Target Start/End: Complemental strand, 14859402 - 14859326
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 477  Q
    ||||||||| ||||||||  || ||||| |||| ||||||||||||||| | |||||| ||||||||||||||||||    
T  14859402 tttcgcaccagtttccgacacatcaaaggtggatgactaatctggctcgtgcgtagagacatgcgcactggtcaaac 14859326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 41339395 - 41339558
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||  ||||  |||| | ||| ||||||||| | |||| | |||||||||| | |||||| ||| |||| ||  ||  |||| |||||    
T  41339395 ctttcgcaccggtttt-gatctgccaatggtgggcgactaatccgtctcgtgcgtagaggcatacacactggccaagcgttgttccccttgggagtcgaa 41339493  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| |||||||||  || |||||| |||| ||||||||| || | |||||||||||||||||||    
T  41339494 cccggtattctccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 41339558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 400 - 480
Target Start/End: Original strand, 49260664 - 49260744
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    |||| |||||| ||||||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||||| ||| ||||    
T  49260664 cttttgcaccgatttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgtt 49260744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 3574447 - 3574610
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||| |||||||||||||  |||| ||| ||  ||||||||| | |||| | ||||||||||||||||||| |||  ||| || |||| |||||| |||    
T  3574447 ctttctcaccggtttccga--cacctaaggtgagcgactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaa 3574544  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    | || ||||| |    || |||||| |||| ||||||||| || |||||||||| |||||||||||    
T  3574545 ctcggtattccctaggtacgtccttggaaggagctccttgccactggagcccaagcaacttggttt 3574610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 401 - 475
Target Start/End: Original strand, 6032643 - 6032717
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 475  Q
    |||||||||||||||||| ||||||||| | ||||||||||| |||||    ||||||||||| |||||||||||    
T  6032643 tttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcattcgtagaggcatgagcactggtcaa 6032717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 14567351 - 14567274
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 477  Q
    ||||||||||| ||||||| |||||||||  |  ||||||||| |||||| | ||||||||||||||||||| |||||    
T  14567351 ctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaaac 14567274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 14597899 - 14597976
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 477  Q
    |||| |||||||||| ||||||| ||||| |||||||||||||  | ||| | ||||||||||||||||||| |||||    
T  14597899 cttttgcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaaac 14597976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 561
Target Start/End: Complemental strand, 29588848 - 29588687
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| || ||||||| ||||||| | ||||  ||||||| |||||| | ||||||||||||||||| | ||| | || ||| ||| ||||||||||    
T  29588848 ctttcgcatcgatttccgacccaccaatggtggataactaatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaa 29588749  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    |||| ||||  |||   | ||| || |||  ||||||||| || |||||||||| |||||||    
T  29588748 cccggtatttcccgggcacgtctttggaatgagctccttgccactggagcccaatcaacttg 29588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 42722576 - 42722713
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| ||| |||| |||| || |||||||||| |||||  | ||||||||||||||||||| ||| |||| ||   || |||||| |||    
T  42722576 ctttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaa 42722675  T
Q  500 cccgatattctccgaataagtccttcgaagaagctcct 537  Q
    |||| ||||  |||  || |||||| |||| |||||||    
T  42722676 cccggtatttcccgggtacgtccttggaaggagctcct 42722713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 400 - 480
Target Start/End: Complemental strand, 17080155 - 17080075
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    ||||||||||||||| ||||||| ||||| ||  ||||||||| |||||  | ||||||||||||||||||| ||| ||||    
T  17080155 ctttcgcaccggttttcgatccatcaaaggtgtgcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgtt 17080075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 4738730 - 4738659
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    ||||||||||||||||||| ||||||||| ||||||||||||   ||||  | |||||| ||||||||||||    
T  4738730 ctttcgcaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactgg 4738659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 20421885 - 20421814
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    |||||| || ||||||||| ||| ||| ||||||||| |||||||||||  | |||||||||||||||||||    
T  20421885 ctttcgaactggtttccgacccatcaatgatggacgattaatctggctcatgcgtagaggcatgcgcactgg 20421814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 492 - 558
Target Start/End: Complemental strand, 13552134 - 13552068
Alignment:
Q  492 gaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaac 558  Q
    |||||||||||||||||| ||| ||| || ||| |||| ||||||||| || |||||||||||||||    
T  13552134 gaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaac 13552068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 434 - 564
Target Start/End: Complemental strand, 14568037 - 14567902
Alignment:
Q  434 cgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagc 533  Q
    ||||||||| | |||| | ||||||| ||| ||||||||||| ||||||| |||| | |||||||||| | ||||| || |||| |||||| |||| |||    
T  14568037 cgactaatccgactcgtgcgtagaggtatgtgcactggtcaagcgttattctccctgagaatcgaacctggtattccccaaatacgtccttagaaggagc 14567938  T
Q  534 ---tccttgtca--atggagcccaaacaacttggtt 564  Q
       |||||| ||   |||||||||||||||||||||    
T  14567937 tgatccttgccactctggagcccaaacaacttggtt 14567902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 18531631 - 18531561
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 470  Q
    ||||||||||||||||||| |||| |||| ||||||| |||||||| ||| |  | |||||||||||||||    
T  18531631 ctttcgcaccggtttccgacccacaaaaggtggacgaataatctggttcgtgcatggaggcatgcgcactg 18531561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 430 - 511
Target Start/End: Original strand, 8064827 - 8064908
Alignment:
Q  430 tggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctc 511  Q
    ||||||||||||| |||||  | |||||||||||||||||||||||  ||||||  ||  |||||||||||||  |||||||    
T  8064827 tggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagtgttattccccttgggaatcgaacccagtattctc 8064908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 509
Target Start/End: Complemental strand, 16645230 - 16645121
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| |||||| || ||| ||||||||| | |||  | |||||||||||| |||||| ||| |||| || | || |  |||||||    
T  16645230 ctttcgcaccggtttccgacccaccacaggtgggcgactaatcagactcatgtgtagaggcatgcacactggccaagcgttgttcttcctgaaaatcgaa 16645131  T
Q  500 cccgatattc 509  Q
    |||| |||||    
T  16645130 cccggtattc 16645121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 412 - 513
Target Start/End: Original strand, 20532420 - 20532521
Alignment:
Q  412 tttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctc 511  Q
    ||||||||||||||||| ||| ||||| ||| |||||  | ||||||||||||||||||| ||| |||| ||   || || |||||||| || |||||||    
T  20532420 tttccgatccaccaaaggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattctc 20532519  T
Q  512 cg 513  Q
    ||    
T  20532520 cg 20532521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 400 - 480
Target Start/End: Complemental strand, 8424666 - 8424586
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    |||||||| || ||| ||| ||||||||||||  ||| |||| ||||||| |  |||||||||||||||||| ||||||||    
T  8424666 ctttcgcatcgattttcgacccaccaaagatgagcgattaatttggctcgtgcatagaggcatgcgcactggccaaacgtt 8424586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 405 - 509
Target Start/End: Complemental strand, 8824671 - 8824567
Alignment:
Q  405 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccga 504  Q
    |||||||||| ||||||| ||  ||| ||||||||||||| |||| | ||||||| |||| ||||| |||| |||| ||||| |  ||||||||| |||     
T  8824671 gcaccggttttcgatccatcagtgatagacgactaatctgcctcgtgcgtagaggtatgcacactgatcaagcgtttttttctcttggaatcgaatccgg 8824572  T
Q  505 tattc 509  Q
    |||||    
T  8824571 tattc 8824567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 409 - 469
Target Start/End: Complemental strand, 46108794 - 46108734
Alignment:
Q  409 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 469  Q
    |||||||||| ||| ||||  |||||||||||||||||||  | |||||||||||||||||    
T  46108794 cggtttccgacccatcaaaagtggacgactaatctggctcatgcgtagaggcatgcgcact 46108734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 493 - 564
Target Start/End: Original strand, 41162974 - 41163045
Alignment:
Q  493 aatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||| || ||||  ||| ||| |||||| |||| |||||||||||| |||||||||| ||||||||||    
T  41162974 aatcgaactcggtatttcccggatacgtccttggaaggagctccttgtcactggagcccaagcaacttggtt 41163045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 401 - 480
Target Start/End: Original strand, 48352509 - 48352588
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    |||||||| ||| |||||  || ||||||||||||||||||| |||||| | |  |||||||| ||||||| ||||||||    
T  48352509 tttcgcactggtctccgactcatcaaagatggacgactaatccggctcgtgtgaggaggcatgtgcactggccaaacgtt 48352588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 494 - 564
Target Start/End: Original strand, 34667695 - 34667765
Alignment:
Q  494 atcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||| ||||| |||  || |||||| |||| ||||||||| || | |||||||||||||||||||    
T  34667695 atcgaacccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 34667765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 408 - 470
Target Start/End: Complemental strand, 54946353 - 54946291
Alignment:
Q  408 ccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 470  Q
    ||||||||||| ||||||| ||||| ||||||||| |||||  | ||||||||||||| ||||    
T  54946353 ccggtttccgacccaccaatgatgggcgactaatccggctcatgcgtagaggcatgcggactg 54946291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 400 - 509
Target Start/End: Complemental strand, 43468459 - 43468350
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||| ||||| ||||||  | ||| ||||||||| |||||  | ||||||  ||| ||||||| ||| |||| ||  ||| ||||||||||    
T  43468459 ctttcgcaccggtctccgacccaccactggtgggcgactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaa 43468360  T
Q  500 cccgatattc 509  Q
    |||| |||||    
T  43468359 cccggtattc 43468350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 400 - 509
Target Start/End: Complemental strand, 45721198 - 45721089
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||| | |||  |||| ||||||||||||| | || | | ||||||||| ||||| ||| ||||| |||||| ||| |  ||| |||    
T  45721198 ctttcgcaccggtttccaacccattaaaggtggacgactaatccgacttgtgcgtagaggcacgcgcagtggccaaacattatttcccctgaaaatggaa 45721099  T
Q  500 cccgatattc 509  Q
    |||| |||||    
T  45721098 cccggtattc 45721089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 6e-37; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 421 - 564
Target Start/End: Original strand, 4973130 - 4973273
Alignment:
Q  421 caccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagt 520  Q
    |||||||| ||||||||||||| ||||||   ||||||||||||||| |||||||  ||||||  ||   ||||||||||||||||||| ||||||||||    
T  4973130 caccaaagctggacgactaatccggctcgtacgtagaggcatgcgcattggtcaagtgttattccccgtaggaatcgaacccgatattccccgaataagt 4973229  T
Q  521 ccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||||||||||||||| |||||||||||||||||||||    
T  4973230 ccttggaagaagctccttgtcagtggagcccaaacaacttggtt 4973273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 17748381 - 17748545
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| ||| ||||| ||||||||||||| ||||||   ||||||||||||||||||| ||| |||| ||  ||| ||||||||||    
T  17748381 ctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 17748480  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||||||| |||||| ||||||||| |||| || | |||||||||||||||||||    
T  17748481 cccggtattccccgaatacgtccttggaagaagctgcttgccactagagcccaaacaacttggtt 17748545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 1606051 - 1605886
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||||  |  |||||||||| ||||||| ||| |||| ||  ||| || |||||||    
T  1606051 ctttcgcaccggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctggaaatcgaa 1605952  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    || | |||||||||  || |||||| |||| |||||||||||| ||||| ||||||||||||||||    
T  1605951 ccaggtattctccgggtacgtccttggaaggagctccttgtcattggagtccaaacaacttggttt 1605886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 400 - 561
Target Start/End: Complemental strand, 1797570 - 1797409
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| |||||||||| ||||||| |||||||||||||||| || |||||| | |||||| |||||||||||| ||| |||| ||| ||| ||||||||||    
T  1797570 cttttgcaccggttttcgatccatcaaagatggacgactagtccggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaa 1797471  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    |||| |||||  || ||| |||||| |||| ||||||||| || |||||||||| |||||||    
T  1797470 cccggtattcctcggatacgtccttggaaggagctccttgccactggagcccaagcaacttg 1797409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 48804793 - 48804629
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||  ||||||||||    
T  48804793 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaa 48804694  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||| ||| |||||| |||| ||||||||| || |||||||||| ||||||||||    
T  48804693 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 48804629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 22974077 - 22973911
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||| |||||||| || ||||||||| |||||||||||||||||||  | ||||| |||||| |||||| ||| |||| ||  ||| | ||||||||    
T  22974077 ctttcgcgccggtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcgaa 22973978  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||| ||||| |||| || |||||| |||| ||||||| | || | |||||||||||||||||||||    
T  22973977 cccggtattccccgagtacgtccttggaaggagctcctcgccattagagcccaaacaacttggttta 22973911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 43861971 - 43862136
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| ||||||||||||| || | |||||||| |||||  | ||||||||||||||||||| |||||||| ||  ||| ||||||||||    
T  43861971 ctttcgcaccggttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaa 43862070  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| ||||| ||  ||| ||| || |||  ||||||||| |  | ||||||||||||||||||||    
T  43862071 cccggtattccccagatacgtctttggaaagagctccttgccgctagagcccaaacaacttggttt 43862136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 26423288 - 26423450
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||| | ||||||||| | ||||||| ||| |||| ||| ||| |||||||||||    
T  26423288 tttcgcaccggtttccga-ccaccaaaggtgaacgactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaac 26423386  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||| |||||   |  || |||||| |||| || | |||| || |||||||||||||||||||||    
T  26423387 ccggtattccttgggtacgtccttggaaggagtttcttgccactggagcccaaacaacttggtt 26423450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 400 - 530
Target Start/End: Original strand, 38578866 - 38578996
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||||||||||| ||| |||| ||  ||| ||||||||||    
T  38578866 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 38578965  T
Q  500 cccgatattctccgaataagtccttcgaaga 530  Q
    |||||||||| |||  || |||||| |||||    
T  38578966 cccgatattccccgggtacgtccttggaaga 38578996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 400 - 567
Target Start/End: Original strand, 22993366 - 22993533
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || ||||||||| ||  ||||||||| || ||| | |||||||||||| |||||| ||| |||| ||   ||  |||||||||    
T  22993366 ctttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaa 22993465  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttac 567  Q
    |||||||||| |||  || |||||| |||| ||||||||| || ||||| |||| |||||||||||||    
T  22993466 cccgatattccccgggtacgtccttggaaggagctccttgccactggagtccaagcaacttggtttac 22993533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 400 - 562
Target Start/End: Complemental strand, 34659336 - 34659174
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| |||  |||||| | ||| ||||||||| |||||| | ||||||||||||||||||||||| |||| ||  ||  | ||||||||    
T  34659336 ctttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaa 34659237  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttgg 562  Q
    |||| ||||| |||  ||  ||| | |||| ||||||||| || |||||||||||||||||||    
T  34659236 cccggtattccccgggtacatccctggaaggagctccttgccactggagcccaaacaacttgg 34659174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 400 - 509
Target Start/End: Complemental strand, 3353534 - 3353426
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| |||||| ||||| ||||||||||||| |||||| | ||||||||||||||||||| |||| |||  |||||| | |||||||     
T  3353534 ctttcgcaccggtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaaatgtt-gtttccctgagaatcgat 3353436  T
Q  500 cccgatattc 509  Q
    ||||||||||    
T  3353435 cccgatattc 3353426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 8734685 - 8734849
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||||| | || |||||||||||||||  ||| | || ||  |||  | |||||||    
T  8734685 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgttcccccaagaaatcgaa 8734784  T
Q  500 cccgatattctccga-ataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    || ||||||| |||| ||| |||||| |||| ||||||||| || ||  |||||||||||||||||    
T  8734785 cctgatattc-ccgagatatgtccttggaaggagctccttgccactgacgcccaaacaacttggtt 8734849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 10047875 - 10048039
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||| | ||||||||||||   ||||  | |||||||| |||||||||| |||  ||| ||  ||| ||||||||||    
T  10047875 ctttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaa 10047974  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||| ||| |||||| |||| ||||||||| || |||||  ||| ||||||||||    
T  10047975 cccggtattccccggatacgtccttggaaggagctccttgccactggagttcaagcaacttggtt 10048039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 560
Target Start/End: Complemental strand, 23658289 - 23658130
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| |||| |||||| || ||||||||||||||||||||||| |||||| | |||||||||||| |||||| ||| |||| ||  ||| || |||||||    
T  23658289 cttttgcacaggtttctgacccaccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaa 23658190  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaactt 560  Q
    |  ||||||| | |  || |||||| |||| ||||||||| || |||||||||||||||||    
T  23658189 ctggatattccctgggtacgtcctt-gaaggagctccttgccactggagcccaaacaactt 23658130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 42210261 - 42210425
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| ||||||| | |||  || ||||| |||||| | ||||||||||||||||||| |||||||| ||||| | ||||||||||    
T  42210261 ctttcgcatcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcgaa 42210360  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
     ||| |||||  || ||| |||||| |||  ||||||||| || ||||| | || ||||||||||    
T  42210361 gccggtattcctcggatacgtccttggaaagagctccttgccactggagtctaagcaacttggtt 42210425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 13095968 - 13095802
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| |||||||||||||| ||||||||| ||  ||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| |||||| |||    
T  13095968 cttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatagaa 13095869  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||| ||||| |||  || ||||||  ||| ||||||||| ||  ||||||||| ||||||||||||    
T  13095868 cccggtattccccgggtacgtccttgaaaggagctccttgccacgggagcccaagcaacttggttta 13095802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 400 - 561
Target Start/End: Original strand, 5069814 - 5069975
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| ||||||||| ||| ||||||||| |||| | | |||||||||||| |||| |  || |||| ||   || || |||||||    
T  5069814 ctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgttcctcctggaaatcgaa 5069913  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    |||| ||||  |||  || |||||| |||||||||||||| || ||||||||||||||||||    
T  5069914 cccggtatttcccgggtacgtccttagaagaagctccttgccactggagcccaaacaacttg 5069975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 47341986 - 47341822
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||| ||||||| ||||||| | || ||||| ||||  ||||| | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  47341986 ctttcgcaccgatttccgacccaccaatggtgaacgaccaatcctgctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 47341887  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    | || ||||| |||  || |||||| |||  ||||||||| || |||||||||| ||||||||||    
T  47341886 ctcggtattccccgggtacgtccttggaatgagctccttgccactggagcccaagcaacttggtt 47341822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 400 - 483
Target Start/End: Complemental strand, 41945583 - 41945500
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttatt 483  Q
    ||||||||||| |||||||  |||||||| ||||||||||||| |||||| | ||||||||||||||||||| ||| |||||||    
T  41945583 ctttcgcaccgatttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttatt 41945500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 22573922 - 22573758
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| | | ||| ||| ||||||||| ||||| |||||  | ||| |||||||||||||||||||| |||  || ||| |  |||||||    
T  22573922 ctttcgcaccggttttcaacccatcaatgatggacgattaatccggctcatgcgtaaaggcatgcgcactggtcaaatgtt-gttcccctgaaaatcgaa 22573824  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||||||||| || ||||  || || ||||||||| ||||  | |||||||||| |||||||||||    
T  22573823 cccgatattcccccaatatatctttggaagaagcttcttgctactggagcccaagcaacttggttt 22573758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 509
Target Start/End: Complemental strand, 29152050 - 29151941
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| ||| ||| | | ||||| ||||| || ||| | |||||||||||||||||||||||||||| || | || ||||||||||    
T  29152050 ctttcgcatcggtttccgacccatcaatggtagacgattaatccggatcgtgtgtagaggcatgcgcactggtcaaacgttgttcttcctgggaatcgaa 29151951  T
Q  500 cccgatattc 509  Q
    |||| |||||    
T  29151950 cccggtattc 29151941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 4195201 - 4195365
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||| | ||||||| | |||||| |||||| |||||  | ||||||||||||||||| | |||| ||| ||   || || |||||||    
T  4195201 ctttcgcatcggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaa 4195300  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    | || ||||| ||| ||| |||||| | || ||||||||| || |||||||||| ||||||||||    
T  4195301 ctcggtattccccggatacgtccttggcaggagctccttgccactggagcccaagcaacttggtt 4195365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 14650427 - 14650263
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| | | ||||||||| ||  ||||||| | |||||  | ||||||||||  ||||||||||| | || ||   || || |||||||    
T  14650427 ctttcgcaccggttttcaacccaccaaaggtgagcgactaacccggctcatgcgtagaggcatatgcactggtcaagcattgttcctcctggaaatcgaa 14650328  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||||||||||||  || |||||| |||| ||||||||| || | ||| |||||||||||||||    
T  14650327 cccgatattctccgggtacgtccttggaaggagctccttgccactagagtccaaacaacttggtt 14650263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 22268040 - 22268193
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||            || |||||||||||| |||| ||| ||  ||| ||||||||||    
T  22268040 ctttcgcaccggtttccgatccaccaaaggtgagcgactaatctg------------agtcatgcgcactggccaaatgttgttccccctgggaatcgaa 22268127  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| ||||| || | || |||||| |||  ||||||||| || ||||||||||||||||||||||    
T  22268128 cccggtattccccaagtacgtccttggaatgagctccttgccactggagcccaaacaacttggttt 22268193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 43346778 - 43346942
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||| ||||||||| ||||||||||||  ||||||||| ||||||   |||||||||||||||| || |||  ||| ||  ||  | |||| |||    
T  43346778 ctttcgcactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaa 43346877  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||  ||| ||| || |||| ||||||||| || ||||| |||||||||||||||    
T  43346878 cccggtattccccagatacgtctttggaaggagctccttgccactggagtccaaacaacttggtt 43346942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 21190779 - 21190914
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| ||| ||||||  ||||| ||||||||||| |||| | ||||||||||||||||| | ||| ||||  |   ||  |||||||||    
T  21190779 ctttcgcaccggttttcgacccaccattgatgggcgactaatctgactcgtgcgtagaggcatgcgcactagccaagcgttgctcctcctaggaatcgaa 21190878  T
Q  500 cccgatattctccgaataagtccttcgaagaagctc 535  Q
    |||| ||||| ||| |||||||||| |||| |||||    
T  21190879 cccggtattccccggataagtccttggaaggagctc 21190914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 27875088 - 27875250
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||||||||| ||| |||| |||| ||||||||||||  | |||  | ||||||||||| ||||||| |||  ||||||  ||| ||||||||||     
T  27875088 tttcgcaccggttttcgacccactaaaggtggacgactaatgcgactcatgcgtagaggcatgtgcactggccaagtgttattccccctgggaatcgaat 27875187  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||| ||||| ||  ||| || ||| |||| |||| |||| || |||||||||||||||||||||    
T  27875188 ccggtattccccagatacgt-cttggaaggagctacttgccactggagcccaaacaacttggtt 27875250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 402 - 564
Target Start/End: Complemental strand, 18785777 - 18785615
Alignment:
Q  402 ttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacc 501  Q
    ||||||||||||||||| |||||| || || ||||||||||  | ||  | ||||||||||||||||||| |||  ||| ||  |||  |||||||||||    
T  18785777 ttcgcaccggtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacc 18785678  T
Q  502 cgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    || ||||| |||  || |||||| |||| |||| |||| || |||||||||  ||||||||||    
T  18785677 cggtattccccgggtacgtccttggaaggagcttcttgccactggagcccatgcaacttggtt 18785615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 43925622 - 43925458
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||| || ||||||| |||||| ||||| |  || |||||||  ||||  | ||||||||||||||||||  |||  ||| ||  ||| ||||||||||    
T  43925622 ctttcacatcggtttctgatccatcaaaggtaaacaactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaa 43925523  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| |||  || |||||| |||| ||||||||| || |||||||||| ||||||||||    
T  43925522 cccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 43925458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 400 - 480
Target Start/End: Complemental strand, 48551967 - 48551887
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| |||||    ||||||||||||||| ||| ||| ||||    
T  48551967 ctttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcatacgtagaggcatgcgcattggccaaccgtt 48551887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 400 - 561
Target Start/End: Original strand, 24969325 - 24969484
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||| ||||||||  ||| ||||| | || |   ||||||||| ||||||||| |||  ||| ||  ||| || |||||||    
T  24969325 ctttcgcaccggtttccgagccatcaaagatgagcgattaatccgacttgtacgtagaggcacgcgcactggccaagtgttgtt--ccctggaaatcgaa 24969422  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    |||| |||| |||  ||| ||||||  || |||||||||| || ||||||||||||||||||    
T  24969423 cccggtattttccagatacgtccttgaaaaaagctccttgccactggagcccaaacaacttg 24969484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 409 - 538
Target Start/End: Original strand, 41267932 - 41268062
Alignment:
Q  409 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttcccc-gggaatcgaacccgatat 507  Q
    |||||||||| ||| ||||| ||||||||||||||  |||  | |||||||||||| ||||  |||| ||||||| |||||    |||||||| ||||||    
T  41267932 cggtttccgacccatcaaaggtggacgactaatctaactcatgcgtagaggcatgcacactaatcaagcgttattctcccctaaaaatcgaactcgatat 41268031  T
Q  508 tctccgaataagtccttcgaagaagctcctt 538  Q
    ||| |||||| || ||| |||||||||||||    
T  41268032 tcttcgaatacgttctttgaagaagctcctt 41268062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 405 - 565
Target Start/End: Original strand, 5039422 - 5039582
Alignment:
Q  405 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccga 504  Q
    |||||||||| ||||||||||||| ||  ||||||||| |||||  | ||||||| ||| ||||||  |||  ||| ||   ||  |||||||||| ||     
T  5039422 gcaccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggtatgtgcactgaccaagtgttgttcctcctaggaatcgaactcgg 5039521  T
Q  505 tattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    ||||| |||||||  ||  | |||| ||||||||| || ||||||||||||||||||||||    
T  5039522 tattccccgaatacatctatggaaggagctccttgccactggagcccaaacaacttggttt 5039582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 27028389 - 27028318
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    ||||||||||||||||||| ||||||||| ||  |||||||||  ||||  | |||||||||||||||||||    
T  27028389 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactgg 27028318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 28744272 - 28744201
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    |||||||||| |||||||| ||||||||| ||||||||||||| ||||||   ||||||| ||||| |||||    
T  28744272 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcgtactgg 28744201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 463
Target Start/End: Complemental strand, 32769047 - 32768984
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatg 463  Q
    ||||| ||||||||||||||||||||||| || |||||||||| | |||| | |||||||||||    
T  32769047 ctttcacaccggtttccgatccaccaaaggtgaacgactaatccgactcgtgcgtagaggcatg 32768984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 430 - 509
Target Start/End: Complemental strand, 44336973 - 44336894
Alignment:
Q  430 tggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 509  Q
    ||||||| | ||||| |||| | ||||||||||||||||||  ||||||||||||| || || |||||||| ||||||||    
T  44336973 tggacgatttatctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattc 44336894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 3603467 - 3603397
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 470  Q
    ||||||||||| ||||||| ||||||||  || |||| ||||| |||||| | ||||||||||||||||||    
T  3603467 ctttcgcaccgatttccgacccaccaaaagtgaacgattaatccggctcgtgcgtagaggcatgcgcactg 3603397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 492 - 558
Target Start/End: Complemental strand, 9685757 - 9685691
Alignment:
Q  492 gaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaac 558  Q
    |||||||||||||||||| ||| ||| || ||| |||| ||||||||| || |||||||||||||||    
T  9685757 gaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaac 9685691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 420 - 566
Target Start/End: Original strand, 36619273 - 36619419
Alignment:
Q  420 ccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataag 519  Q
    ||||||| | ||||||||||||| |||||  | |||||||||||| |||||| |||  ||| ||  ||| |||||||||||||| ||||| || |||| |    
T  36619273 ccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccctgggaatcgaacccggtattccccaaatacg 36619372  T
Q  520 tccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||||  ||| || |||||| || | ||| ||||| |||||| ||||    
T  36619373 tccttgcaaggagttccttgccactagagtccaaataacttgattta 36619419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 434 - 565
Target Start/End: Original strand, 4228787 - 4228915
Alignment:
Q  434 cgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagc 533  Q
    ||||||||| |||||  | |||| |||||| ||||||| |||||||| ||   || || ||||||||| | |||||  || ||| |||||| |||| |||    
T  4228787 cgactaatccggctcatgcgtaggggcatgtgcactggccaaacgttgtt---cctggaaatcgaacctggtattcctcggatacgtccttggaaggagc 4228883  T
Q  534 tccttgtcaatggagcccaaacaacttggttt 565  Q
    |||||| |  ||||||||||||||||||||||    
T  4228884 tccttgccgctggagcccaaacaacttggttt 4228915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 509
Target Start/End: Original strand, 10317745 - 10317853
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||||||||||||| ||  |||||||||| |||   |  ||||||||| |||||||  |||  ||||||  ||| ||||||||||    
T  10317745 ctttcgcaccggtttccgatccaccaaaggtgagcgactaatct-gcttatgcatagaggcatacgcactgaccaagtgttattccccctgggaatcgaa 10317843  T
Q  500 cccgatattc 509  Q
    |||| |||||    
T  10317844 cccggtattc 10317853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 491 - 567
Target Start/End: Original strand, 34127710 - 34127786
Alignment:
Q  491 ggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttac 567  Q
    ||||||||||||| ||||| |||  || |||||| |||| || |||||| || |||||||||| |||||||||||||    
T  34127710 ggaatcgaacccggtattccccgggtacgtccttggaaggagttccttgccattggagcccaagcaacttggtttac 34127786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 400 - 560
Target Start/End: Complemental strand, 42032206 - 42032046
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| ||| |||||||||| ||| ||||| ||||| ||||||  |||||  | ||||| | ||| ||||||| |||||||| ||  ||  ||||||||||    
T  42032206 ctttagcatcggtttccgacccatcaaaggtggacaactaattcggctcatgcgtagatgtatgtgcactggccaaacgttgttccccgtgggaatcgaa 42032107  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaactt 560  Q
    || | ||||| |||  || |||||| |||| |||| ||||  | |||||||||||||||||    
T  42032106 ccaggtattccccgggtacgtccttggaaggagcttcttgctactggagcccaaacaactt 42032046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 405 - 564
Target Start/End: Original strand, 45960007 - 45960165
Alignment:
Q  405 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccga 504  Q
    |||||||||||||||||| ||||| ||  ||||||||| ||||   | ||||||||||||||||||  |||  ||| ||  ||  ||||||| ||| ||     
T  45960007 gcaccggtttccgatccatcaaaggtgagcgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgttgcccttgggaatcaaactcgg 45960106  T
Q  505 tattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||| ||| ||| |||||| |||  |||||||||  | |||||| ||||||||||||||    
T  45960107 tattccccg-atacgtccttggaaagagctccttgctactggagctcaaacaacttggtt 45960165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 48244355 - 48244430
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 475  Q
    ||||||||||||||| ||||||||||||| ||  ||||||||| |||||  | |||||||||  ||||||| ||||    
T  48244355 ctttcgcaccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggcaaacgcactgatcaa 48244430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 24983417 - 24983487
Alignment:
Q  400 ctttcgcaccggtttcc-gatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 469  Q
    |||||||| |||||||| || ||||||| | ||||||||||||| |||||  | |||||||||||||||||    
T  24983417 ctttcgcatcggtttccagacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcact 24983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 39475050 - 39474980
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 470  Q
    ||||||||| ||||| ||| |||| |||| ||||||||||||| |||||  | ||||||| ||||||||||    
T  39475050 ctttcgcactggttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactg 39474980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 519 - 568
Target Start/End: Original strand, 19914820 - 19914869
Alignment:
Q  519 gtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttaca 568  Q
    |||||| |||| ||||||||| || |||||||||| ||||||||||||||    
T  19914820 gtccttggaaggagctccttgccactggagcccaagcaacttggtttaca 19914869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 410 - 463
Target Start/End: Complemental strand, 20097289 - 20097236
Alignment:
Q  410 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatg 463  Q
    ||||||||||||| ||| ||||||||||||||||  |||| | |||||||||||    
T  20097289 ggtttccgatccatcaaggatggacgactaatctaactcgtgcgtagaggcatg 20097236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 407 - 468
Target Start/End: Original strand, 28396166 - 28396227
Alignment:
Q  407 accggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcac 468  Q
    |||||||||||| ||||||||| | ||||||||||| |||||  | ||| ||||||||||||    
T  28396166 accggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgcgcac 28396227  T

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Target: chr6 (Bit Score: 79; Significance: 2e-36; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1066 - 1176
Target Start/End: Complemental strand, 11647624 - 11647514
Alignment:
Q  1066 gtaagttaatgtagtgtaattaaaatataaataaaatatgcatttattaattatttgaggtgagaaaaggataacgtaaatatgacaaattatttgtttg 1165  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||| ||| ||||| ||||||||||||||| ||||||||||    
T  11647624 gtaaattaatgtagtgtaattaaaatataaataaaatatgcatttgttagttatttgagatgacaaagggataccgtaaatatgacaaactatttgtttg 11647525  T
Q  1166 tacaagtgatg 1176  Q
    |||||||||||    
T  11647524 tacaagtgatg 11647514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 400 - 567
Target Start/End: Original strand, 14107357 - 14107524
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| |||| ||  |||| ||||||||| |||||  | ||||||||||| ||||||||||| |||| ||   || ||||||||||    
T  14107357 ctttcgcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaa 14107456  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttac 567  Q
    |||| ||||| ||||||| ||| || |||| ||||||||| || ||||||||||||||||||||||||    
T  14107457 cccggtattccccgaatacgtctttggaaggagctccttgccactggagcccaaacaacttggtttac 14107524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 400 - 561
Target Start/End: Original strand, 13036003 - 13036164
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| |||||||   |||||||||||||||||||  | ||||||||||||||||||| |||  ||| ||  ||| |  |||||||    
T  13036003 ctttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaa 13036102  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    |||||||||| ||||||| |||||| |||| ||||||||| || |||||||||| |||||||    
T  13036103 cccgatattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaacttg 13036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 21898759 - 21898595
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| |||| |||| || |||||||||| |||||  | ||||||||||||||||||| ||| |||| ||   || ||||||||||    
T  21898759 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 21898660  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||| ||| |||||| |||| ||||||||| || |||||||||| ||||||||||    
T  21898659 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 21898595  T

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Target: chr6; HSP #5
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 5253222 - 5253386
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||| ||| ||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  5253222 ctttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 5253321  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| |||  || |||||| |||| ||||||||| || |||||||||| ||||||||||    
T  5253322 cccggtattccccgggtacgtccttggaaggagctccttgccattggagcccaagcaacttggtt 5253386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 8938822 - 8938658
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||  |||||  | ||||| || ||||||||||||||  ||| ||   || ||||||||||    
T  8938822 ctttcgcaccggtttccgacccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaatcgaa 8938723  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||   ||||| ||| ||| ||| || |||| |||||||||||| |||||||||||||||||||||    
T  8938722 ccaagtattccccggatatgtctttggaaggagctccttgtcactggagcccaaacaacttggtt 8938658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 400 - 567
Target Start/End: Original strand, 8611973 - 8612140
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || ||||||||| ||| ||||||||| || ||  | ||||| |||||| |||||||||| |||| ||   ||  |||||||||    
T  8611973 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaa 8612072  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttac 567  Q
    |||| ||||| |||  || |||||| |||| ||||||||| || ||||| ||||||||||||||||||    
T  8612073 cccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggtttac 8612140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 6606096 - 6606262
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||  | |||||||||||  |||||| |||  ||| ||  ||| | ||||||||    
T  6606096 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcgaa 6606195  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||| ||||| ||| ||| |||||| |||| ||||||||| || ||  |||||| ||||||||||||    
T  6606196 cccggtattccccggatacgtccttggaaggagctccttgccactgtggcccaagcaacttggttta 6606262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 405 - 565
Target Start/End: Original strand, 2271307 - 2271465
Alignment:
Q  405 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccga 504  Q
    |||| |||||| || ||| ||||| ||||||||||||| |||||| | |||||| ||||||||||||  || |||| || ||   | ||||||||||||     
T  2271307 gcactggtttctgacccatcaaaggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgttctct--gagaatcgaacccgg 2271404  T
Q  505 tattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    ||||| ||||||| |||||| |||| ||||||||| || |||||||||| |||||||||||    
T  2271405 tattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaacttggttt 2271465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 400 - 517
Target Start/End: Complemental strand, 3601195 - 3601078
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| |||||| | ||| ||||||||||||||| ||| |||| ||  ||| | ||||||||    
T  3601195 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccctgagaatcgaa 3601096  T
Q  500 cccgatattctccgaata 517  Q
     ||| ||||| |||||||    
T  3601095 accggtattccccgaata 3601078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 9179735 - 9179900
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||| |||| ||||||||||||||||| |||||||||||||  ||||  | ||||||| ||||  |||||||||  ||| ||  ||| ||||||||||    
T  9179735 ctttcggaccgatttccgatccaccaaaggtggacgactaatccagctcatgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatcgaa 9179834  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| ||||| | |  || |||||| |||  ||||||||| || ||||||||||||||||||||||    
T  9179835 cccggtattccctgggtacgtccttggaatgagctccttgccactggagcccaaacaacttggttt 9179900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 400 - 560
Target Start/End: Original strand, 30788852 - 30789010
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||| |  |||||||||||||||||| |||||||| ||  ||  | ||||| ||    
T  30788852 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgtt--ccatgagaatcaaa 30788949  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaactt 560  Q
    |||||||||| ||| |||  ||||| |||| ||||||||| || ||| | |||| ||||||    
T  30788950 cccgatattccccggatacatccttggaaggagctccttgccactggggtccaagcaactt 30789010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 401 - 560
Target Start/End: Complemental strand, 11142713 - 11142554
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||||||| ||||| ||||||||| ||||| ||||||||| |||  | |||||||||||||||||||||||||||| ||| | | | |||||||||    
T  11142713 tttcgcaccggtctccgacccaccaaagttggacaactaatctgactcatgcgtagaggcatgcgcactggtcaaacgttgtttccactgcgaatcgaac 11142614  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaactt 560  Q
     || ||||  |||  || |||||| |||  |||| ||||||| ||  |||||||||||||    
T  11142613 tcggtatttcccgggtatgtccttggaatgagcttcttgtcactgaggcccaaacaactt 11142554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 8932772 - 8932608
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||| ||||| |||  || ||||| |||||  | ||||||||||||||||| | |||  ||| ||  ||| ||||||||||    
T  8932772 ctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaa 8932673  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||| ||| |||  ||||| |||| | ||||||| || |||||  ||||||||||||||    
T  8932672 cccgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaacttggtt 8932608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 8944238 - 8944074
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||| ||||| |||  || ||||| |||||  | ||||||||||||||||| | |||  ||| ||  ||| ||||||||||    
T  8944238 ctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaa 8944139  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||| ||| |||  ||||| |||| | ||||||| || |||||  ||||||||||||||    
T  8944138 cccgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaacttggtt 8944074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 480
Target Start/End: Original strand, 9633624 - 9633704
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||||| ||| ||||    
T  9633624 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgtt 9633704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 13469044 - 13468880
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||| | ||||||| | ||| |||||||||||||||| | ||||||||||| ||||||  ||| |||| ||  |||  ||||| |||    
T  13469044 ctttcgcaccggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaatcgttgttccccctaggaattgaa 13468945  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    || | ||||| ||| ||| |||||| |||| ||||||||| ||   |||||||| ||||||||||    
T  13468944 cctggtattccccggatacgtccttggaaggagctccttgccaccagagcccaagcaacttggtt 13468880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 19089609 - 19089445
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| | ||||||||||| |||||| | |||||||||||| |||||| |||  ||| ||  ||| ||||||| ||    
T  19089609 ctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccctgggaatcaaa 19089510  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    || | |||||  || ||| ||||||  ||  |||||||||  | |||||||||| ||||||||||    
T  19089509 cctggtattcctcggatacgtccttgaaatgagctccttgcgactggagcccaagcaacttggtt 19089445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 29333138 - 29333301
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||| |||| | ||||||| ||||||||| ||  |||||  | ||||||||||||||||||| ||||||||  || ||| || |||||||    
T  29333138 ctttcgcaccggttaccgacctaccaaaggtggacgactgattcggctcatgcgtagaggcatgcgcactggccaaacgtt-gttcccctggaaatcgaa 29333236  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| | |  || |||||| |||| ||||| ||| || | |||||||||||||||||||    
T  29333237 cccggtattccctgggtacgtccttggaaggagctcattgccactagagcccaaacaacttggtt 29333301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 401 - 569
Target Start/End: Original strand, 32157167 - 32157335
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||| |||||||||| ||||||||||||||||| ||||||||||||||  | ||||||| |||||||||||||||  ||| ||  | |    |||  |||    
T  32157167 tttcacaccggtttctgatccaccaaagatggatgactaatctggctcatgcgtagaggtatgcgcactggtcaagtgttgttccctctaaaaattaaac 32157266  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttacat 569  Q
    | ||||||| |  |||| |||||| |||| |||||||| ||| |||||||||| ||| |||||||||||    
T  32157267 ctgatattccctaaatatgtccttagaaggagctccttatcagtggagcccaagcaatttggtttacat 32157335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 24671865 - 24672031
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||| ||||| ||||||| ||| |||||  |||| ||||||| |||| | | |||||||||||| ||||||||||  ||| ||  | | |||||| |||    
T  24671865 ctttcacaccgatttccgaaccatcaaaggcggactactaatccggcttgtgcgtagaggcatgcacactggtcaagtgttgttccctctgggaatagaa 24671964  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||| ||||||||  ||| ||||||  ||| ||||||||| || |||||||||| ||||||||||||    
T  24671965 cccggtattctccagatacgtccttgaaaggagctccttgccactggagcccaagcaacttggttta 24672031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 3587944 - 3588109
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| | |||||||||||| ||||| | ||||||||||| || ||  | ||||||| ||| ||||||| ||| |||| ||  ||  ||||||||||    
T  3587944 ctttcgcatcagtttccgatccatcaaaggttgacgactaatccggttcatgcgtagaggtatgtgcactggccaagcgttgttccccttgggaatcgaa 3588043  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| ||||||||| ||| ||| || ||| || ||||||| || | ||||||||||||||| ||||    
T  3588044 cccggtattctccggatacgtctttggaataaactccttgccacttgagcccaaacaacttagttt 3588109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 557
Target Start/End: Original strand, 34954618 - 34954774
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||  ||||||||| ||| ||||| |||||||||||||||||||  | ||||||| ||| ||||||| |||||||| ||  ||| | ||||||||    
T  34954618 ctttcgcattggtttccgacccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatcgaa 34954717  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaa 557  Q
    || | ||||| ||   || |||||| |||| ||||||||| | |||||||||||||||    
T  34954718 cctggtattccccaggtacgtccttggaaggagctccttg-ccatggagcccaaacaa 34954774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 29444764 - 29444928
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||  |||||||| ||||||||||||||| ||||||| |||||  | ||||||||||||||||||| ||| |||| ||  |||  | |||||||    
T  29444764 ctttcgcactagtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctagaaatcgaa 29444863  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||| | |||  || ||| || |||| ||||||||| || | ||||||||  |||||||||    
T  29444864 cccggtatcccccgggtacgtctttggaaggagctccttgccactagagcccaagtaacttggtt 29444928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 12606541 - 12606375
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||||    |||||||| ||| ||||||||| |||||| | ||||||||||||||||||| |||||||| ||  ||| || |||||||    
T  12606541 ctttcgcaccggtttccagctcaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 12606442  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
     | | ||||| ||| ||| || ||| |||| ||||| ||| ||   |||||||| ||| ||||||||    
T  12606441 tctggtattccccggatacgttcttggaaggagctcattgccagcagagcccaagcaatttggttta 12606375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 400 - 505
Target Start/End: Complemental strand, 5029928 - 5029823
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| |||||||| ||| ||||||||| |||||||||   |||  | ||||||||||||||||||  |||||||| || |||| | ||||||||    
T  5029928 ctttcgcaccagtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactgaccaaacgttgttctccctgagaatcgaa 5029829  T
Q  500 cccgat 505  Q
    ||||||    
T  5029828 cccgat 5029823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 12635925 - 12635796
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| |||||||   ||| ||||||||| |||| | | ||||||||||||||||| | ||| |||| ||| ||| ||||||| ||    
T  12635925 ctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtttcccctgggaatcaaa 12635826  T
Q  500 cccgatattctccgaataagtccttcgaag 529  Q
    || | ||||| ||| ||| |||||| ||||    
T  12635825 cctggtattccccggatacgtccttggaag 12635796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 3030707 - 3030781
Alignment:
Q  490 gggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||||||||||||| |  |||| |||||| |||  ||||||||| || |||||||||||||||||||||    
T  3030707 gggaatcgaacccgatattcccgaaatacgtccttggaatgagctccttgccactggagcccaaacaacttggtt 3030781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 14783419 - 14783488
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 469  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||  | |||||||||||| ||||    
T  14783419 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacact 14783488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 31129288 - 31129219
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 469  Q
    |||||||||||||||||||  |||||||| || || |||||||||||||  | |||||||||||||||||    
T  31129288 ctttcgcaccggtttccgactcaccaaaggtgcacaactaatctggctcatgcgtagaggcatgcgcact 31129219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 437 - 553
Target Start/End: Original strand, 9366459 - 9366575
Alignment:
Q  437 ctaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctcc 536  Q
    |||||| |||||| | ||||||||||||||||||| ||| |||||||  |||    ||||||||| ||||||| || | ||  ||||| |||| ||||||    
T  9366459 ctaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattccccctaaaaatcgaacctgatattccccaagtacatccttggaaggagctcc 9366558  T
Q  537 ttgtcaatggagcccaa 553  Q
    |||||| ||||||||||    
T  9366559 ttgtcactggagcccaa 9366575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 10311468 - 10311633
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| |||| ||| ||||||| | ||  ||||||||||  |||| | |||||| |||||||||||| ||| |||| ||  ||  | | ||||||    
T  10311468 ctttcgcaccagttttcgacccaccaatggtgagcgactaatctaactcgtgcgtagagacatgcgcactggccaagcgttgttccccttgaggatcgaa 10311567  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| ||||| ||| ||| || ||| |||| |||||||||  | |||||||||| |||| ||||||    
T  10311568 cccggtattccccggatacgttcttggaaggagctccttgctactggagcccaagcaacatggttt 10311633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 13391397 - 13391320
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 477  Q
    |||| |||||||||| ||| |||  ||| |||| ||||||||| |||||| | ||||||||||||||||||| |||||    
T  13391397 cttttgcaccggttttcgacccattaaatatgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaac 13391320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 401 - 509
Target Start/End: Original strand, 8149797 - 8149904
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||||||||||| | ||||||||| ||||||||||||  ||||   | ||||||||||| ||| ||||||||  || || | ||  ||||||||||    
T  8149797 tttcgcaccggtttccaacccaccaaaggtggacgactaattcggctaatgcgtagaggcatgtgcattggtcaaatattgttct-cctaggaatcgaac 8149895  T
Q  501 ccgatattc 509  Q
    |||||||||    
T  8149896 ccgatattc 8149904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 453 - 561
Target Start/End: Complemental strand, 9147359 - 9147251
Alignment:
Q  453 gtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagccca 552  Q
    ||||||||||| |||||||||||  ||  ||  ||| |||||||||||||||||||| ||   || |||||| |||  ||||||||  || |||||||||    
T  9147359 gtagaggcatgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattccccaggtacgtccttggaatgagctccttcccactggagccca 9147260  T
Q  553 aacaacttg 561  Q
    |||||||||    
T  9147259 aacaacttg 9147251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 420 - 564
Target Start/End: Original strand, 19230578 - 19230720
Alignment:
Q  420 ccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataag 519  Q
    ||||||| |||| |||||||||| |||||| | ||||||||||||  ||||  ||| |||| ||  ||  |  ||||||| ||| ||||| |||| || |    
T  19230578 ccaccaatgatgaacgactaatccggctcgtgcgtagaggcatgcatactgaccaagcgttgttc-ccttgaaaatcgaatccggtattc-ccgagtacg 19230675  T
Q  520 tccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||| |||| ||||||||| || |||||||||||||||||||||    
T  19230676 tccttggaaggagctccttgccactggagcccaaacaacttggtt 19230720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 30410556 - 30410484
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggt 472  Q
    |||||||| |||||||||| ||||||||||||  ||| |||||  ||||  | ||||||||||||||||||||    
T  30410556 ctttcgcatcggtttccgacccaccaaagatgagcgattaatccagctcatgcgtagaggcatgcgcactggt 30410484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 424 - 472
Target Start/End: Complemental strand, 33940098 - 33940050
Alignment:
Q  424 caaagatggacgactaatctggctcgcgagtagaggcatgcgcactggt 472  Q
    ||||||||||||||||||| |||||| | ||||||||||||||| ||||    
T  33940098 caaagatggacgactaatccggctcgtgtgtagaggcatgcgcaatggt 33940050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 410 - 480
Target Start/End: Complemental strand, 8888983 - 8888913
Alignment:
Q  410 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    ||||| ||||||| ||||| ||||||||||||| | |||  | ||||||| ||||||||||| ||||||||    
T  8888983 ggttttcgatccatcaaaggtggacgactaatccgactcatgcgtagaggtatgcgcactggccaaacgtt 8888913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 21016841 - 21016914
Alignment:
Q  491 ggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||||||||||| ||||| |||  || |||| | |||| ||||||||| || |||||||||| ||||||||||    
T  21016841 ggaatcgaacccggtattccccgggtacgtccctggaaggagctccttgccactggagcccaagcaacttggtt 21016914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 4e-35; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 18902529 - 18902693
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||||| | |||||| || ||||||||||||| |||| ||  ||  ||||||||||    
T  18902529 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaa 18902628  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| |||| || |||||| |||| ||||||||| || |||||||||| ||||||||||    
T  18902629 cccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 18902693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 8410238 - 8410074
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| || |||||  ||| ||||||||| |||||| | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  8410238 ctttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 8410139  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||||||||||||  || |||||| |||| ||||||||| || |||||||||| ||||||||||    
T  8410138 cccgatattctccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 8410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 14169608 - 14169772
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||| | | ||||||||||| |||||  | |||||| ||||||||||||||||  ||| ||  ||| | ||||||||    
T  14169608 ctttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaa 14169707  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||| ||||||| |||||| |||  | |||||||||| |||||||||||||||||||||    
T  14169708 cccgatattccccgaatacgtccttggaaagatctccttgtcactggagcccaaacaacttggtt 14169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 12864331 - 12864167
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||| | |||||||||||||||||||  | | ||||||||||||||||  |||  ||| ||  ||| || |||||||    
T  12864331 ctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaa 12864232  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
     ||| ||||| ||||||| ||| || |||| |||||||||||| |||||||||||||||||||||    
T  12864231 tccggtattccccgaatacgtcattggaaggagctccttgtcactggagcccaaacaacttggtt 12864167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 38005509 - 38005345
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| |||||||||||||||||| ||| ||||||||| |||||  | ||||||||||||||||||| ||| |||| ||  ||  ||||||||||    
T  38005509 ctttcgcaccagtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaa 38005410  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||  ||||| |||  || |||||| |||| ||||||||| || |||||||||||||||||||||    
T  38005409 cccagtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 38005345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 411 - 577
Target Start/End: Original strand, 10026626 - 10026792
Alignment:
Q  411 gtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattct 510  Q
    |||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||||||||||| |||||||| ||  ||| | |||||||||||| |||| |    
T  10026626 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtatttt 10026725  T
Q  511 ccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttacattttattaa 577  Q
    |||| || |||||| |||| ||||||||| || |||||||||| ||||||||||  |||||| ||||    
T  10026726 ccgagtacgtccttggaaggagctccttgccattggagcccaagcaacttggttaccatttttttaa 10026792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 7747381 - 7747217
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| |||| |||| || |||||||||| |||||  | |||||||||||| |||||| |||||||| ||   ||  |||||||||    
T  7747381 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaa 7747282  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||| ||| |||||| |||| ||||||||| || |||||||||| ||||||||||    
T  7747281 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 7747217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 411 - 577
Target Start/End: Original strand, 10046487 - 10046652
Alignment:
Q  411 gtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattct 510  Q
    |||||||| ||||||||| ||| ||||||||| |||||  | |||||||||||||||||| ||||||||| ||| ||  | |||||||||||| ||||||    
T  10046487 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactg-tcaaacgttgtttcccttgagaatcgaacccggtattct 10046585  T
Q  511 ccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttacattttattaa 577  Q
    ||| ||| || ||| |||| ||||||||| || |||||||||| ||||||||||  |||||| ||||    
T  10046586 ccggatacgttcttggaaggagctccttgccattggagcccaagcaacttggttaccatttttttaa 10046652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 400 - 561
Target Start/End: Complemental strand, 21286551 - 21286390
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| |||||||||||| | ||||||| ||||   ||||||||  ||||| | ||||||||||||||||||||||| |||| |||  || ||||||||||    
T  21286551 cttttgcaccggtttccaacccaccaatgatgagtgactaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaa 21286452  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    |||| ||||| ||| ||| |||||| |||| ||||||||| || |||||| |||||||||||    
T  21286451 cccggtattccccggatacgtccttggaaggagctccttgccactggagctcaaacaacttg 21286390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 400 - 561
Target Start/End: Original strand, 28616378 - 28616540
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || |||| |||||||| |||||||||||||||| | ||||||||||||||||||  |||  ||||||  ||| |  |||||||    
T  28616378 ctttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccccctgaaaatcgaa 28616477  T
Q  500 cccgatattctccgaataagtccttcgaagaagctcc-ttgtcaatggagcccaaacaacttg 561  Q
    ||||||||||  || ||| |||||| |||| || ||| |||||| ||||| ||||||||||||    
T  28616478 cccgatattccgcggatatgtccttggaaggagttcctttgtcactggagtccaaacaacttg 28616540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 400 - 548
Target Start/End: Original strand, 25540403 - 25540551
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| |||||| | ||||||||||||||||||| ||| |||| ||  |||  |||||||||    
T  25540403 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaa 25540502  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggag 548  Q
    |||  ||||| ||  ||| |||||| |||  ||||||||| || |||||    
T  25540503 cccagtattccccagatacgtccttggaatgagctccttgccactggag 25540551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 44945700 - 44945537
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||||||||||| |||| ||| ||||||||| |||||| | |||||||||||||||||   ||| ||||  || | | ||||||| ||    
T  44945700 ctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgtt-gttcctctgggaatcaaa 44945602  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||  |||||||||| || |||||| |||| ||||||||| || | |||||||| ||||||||||    
T  44945601 cccagtattctccgagtacgtccttggaaggagctccttgccacttgagcccaagcaacttggtt 44945537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 400 - 554
Target Start/End: Complemental strand, 25549835 - 25549681
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| |||||| ||| ||||||| ||||||||||||||||||| |||||| | ||||||||||| ||||| | |||| ||| |||||||   ||||||||    
T  25549835 cttttgcaccgatttacgatccatcaaagatggacgactaatccggctcgtgcgtagaggcatgtgcactagccaaatgttgttttccctaagaatcgaa 25549736  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaa 554  Q
    |||  ||||| || |||| || ||| |||| ||||||||| || |||||||||||    
T  25549735 cccagtattccccaaatacgtacttggaaggagctccttgccactggagcccaaa 25549681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 16813164 - 16813329
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaa-tcga 498  Q
    ||||||||| | ||||| | | ||||||||||||||||||||| |||||| |  |||||||||||| |||||||||||||  | |||||| | || | ||    
T  16813164 ctttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgt--tgttcccctgaaagttga 16813261  T
Q  499 acccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    ||  | |||||||||| || |||||| |||| |||||||||||| ||||||| |||||||| ||||||    
T  16813262 acttggtattctccgagtacgtccttggaaggagctccttgtcagtggagcctaaacaactaggttta 16813329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 16852443 - 16852608
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaa-tcga 498  Q
    ||||||||| | ||||| | | ||||||||||||||||||||| |||||| |  |||||||||||| |||||||||||||  | |||||| | || | ||    
T  16852443 ctttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgt--tgttcccctgaaagttga 16852540  T
Q  499 acccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    ||  | |||||||||| || |||||| |||| |||||||||||| ||||||| |||||||| ||||||    
T  16852541 acttggtattctccgagtacgtccttggaaggagctccttgtcagtggagcctaaacaactaggttta 16852608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 22593240 - 22593078
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||| |||| ||||||||| ||||||||||||| |||||  | ||||||||||||||||||| | |||||| ||  ||| ||||||||||    
T  22593240 ctttcgcaccggtt-ccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgg-ccaacgttgttccccctgggaatcgaa 22593143  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    | |  ||||| |||  || |||||| |||| ||||||||| || |||||| ||| ||||||||||    
T  22593142 ctcagtattccccgggtacgtccttggaaggagctccttgccactggagcacaagcaacttggtt 22593078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 400 - 538
Target Start/End: Complemental strand, 10823167 - 10823029
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| |||| |||| ||| ||||||||| |||||| | ||||||||||||||||||| ||| |||| ||   || ||||||| ||    
T  10823167 ctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcaaa 10823068  T
Q  500 cccgatattctccgaataagtccttcgaagaagctcctt 538  Q
    |||| ||||| |||  || |||||| |||| ||||||||    
T  10823067 cccggtattccccgggtacgtccttggaaggagctcctt 10823029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 5035395 - 5035230
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||  ||||||||| |||  |||| |||| || ||||| || ||| | |||||| |||||||||||||||| | || ||||  | ||||||||||    
T  5035395 ctttcgcatgggtttccgacccattaaaggtggatgattaatccggttcgtgcgtagagacatgcgcactggtcaagcattgttttttctgggaatcgaa 5035296  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    ||| ||||| |||| ||| || ||| |||| |||||| || || ||||||||||||||||||||||    
T  5035295 cccaatattttccggatacgttcttagaagcagctccgtgccactggagcccaaacaacttggttt 5035230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 400 - 569
Target Start/End: Complemental strand, 11069985 - 11069816
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| ||||||| | ||||||||||||   ||||| | ||||||| ||||||||||| |||||||| ||  |||  |||||||||    
T  11069985 ctttcgcatcggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgttccccctcggaatcgaa 11069886  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttacat 569  Q
    || | ||||| |||  || |||||| |||  ||||||| | || ||||||| ||||||||||||| ||||    
T  11069885 cctggtattccccgggtacgtccttggaatgagctcctagccattggagccaaaacaacttggttaacat 11069816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 400 - 557
Target Start/End: Original strand, 39806884 - 39807041
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||  || ||||||||| |||| |||||||| | |||| | ||||||||||||||||||| |||||||| |||  |  ||||||||||    
T  39806884 ctttcgcaccggtttatgaaccaccaaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaa 39806983  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaa 557  Q
    |||| ||||| |||  || ||||||  ||| |||  |||| || ||||||||||||||    
T  39806984 cccggtattccccgggtacgtccttgtaaggagcatcttgccactggagcccaaacaa 39807041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 2550975 - 2550811
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| | | ||||||||  ||| ||||||||| |||||  | |||||| ||||||||||||  ||  ||| ||   || ||||||||||    
T  2550975 ctttcgcaccggttttcaacccaccaaaagtgggcgactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaa 2550876  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||| ||| ||| ||||||  ||| ||||||||| || |||||||||| ||||||||||    
T  2550875 cccgatattccccggatacgtccttgtaaggagctccttgccactggagcccaagcaacttggtt 2550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 400 - 539
Target Start/End: Complemental strand, 41220742 - 41220603
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| |||| |||| || |||||||||  |||||  | ||||||||||||||||||| ||| |||| ||   || ||||||||||    
T  41220742 ctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 41220643  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttg 539  Q
    |||| ||||| |||  || |||||| |||| |||||||||    
T  41220642 cccggtattccccgggtacgtccttggaaggagctccttg 41220603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 434 - 564
Target Start/End: Original strand, 21180347 - 21180477
Alignment:
Q  434 cgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagc 533  Q
    ||||||||| |||||| | ||||||||||| ||||||| |||  ||| || |||  |||||||||| ||| |||||| ||  || |||||| |||| |||    
T  21180347 cgactaatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattcttcgggtacgtccttggaaggagc 21180446  T
Q  534 tccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||| || |||||||||||||||||||||    
T  21180447 tccttgccactggagcccaaacaacttggtt 21180477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 509
Target Start/End: Complemental strand, 12455417 - 12455308
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||| | ||  ||||||||| |||||| | |||||||||||||||||||  || |||| ||| ||| || |||||||    
T  12455417 ctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcgaa 12455318  T
Q  500 cccgatattc 509  Q
    |||| |||||    
T  12455317 cccggtattc 12455308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 20612534 - 20612699
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatct-ggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgg-gaatcga 498  Q
    |||||||||||||||||| ||||||| | |||||||||||||  |||||  |  |||||||||||||||||| |||  ||| ||  | || | |||||||    
T  20612534 tttcgcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaagtgttgttccctcctgagaatcga 20612633  T
Q  499 acccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||| ||||| |||||||   |||| |||| ||||||||| || |||||||||| ||||||||||    
T  20612634 acccggtattccccgaatacaaccttggaaggagctccttgccactggagcccaagcaacttggtt 20612699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 557
Target Start/End: Complemental strand, 34722787 - 34722631
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| |||||| ||||| ||| ||||||||| |||||| | |||||| |||| ||||||  ||| |||| || |||| | ||||||||    
T  34722787 ctttcgcaccggtttctgatccatcaaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactgaccaagcgttgttctccctgagaatcgaa 34722688  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaa 557  Q
    ||| ||||||      || |||||| |||| |||||||||||| ||||||||||||||    
T  34722687 ccc-atattcatttggtacgtccttggaaggagctccttgtcactggagcccaaacaa 34722631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 509
Target Start/End: Complemental strand, 44139591 - 44139482
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||  | ||| ||||||||| |||||| | ||||||||| ||||||||| ||| |||| ||  ||| ||||||||||    
T  44139591 ctttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaa 44139492  T
Q  500 cccgatattc 509  Q
    |||| |||||    
T  44139491 cccggtattc 44139482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 420 - 561
Target Start/End: Original strand, 45263686 - 45263827
Alignment:
Q  420 ccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataag 519  Q
    ||||||||||||  ||| ||||| |||||| | ||||||||||||||||||| ||| |||| ||  | | |||||||||||||| ||||| ||| ||||     
T  45263686 ccaccaaagatgagcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccggataaa 45263785  T
Q  520 tccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    |  ||  ||| ||||||||| || ||||||||||||||||||    
T  45263786 tttttgaaaggagctccttgccactggagcccaaacaacttg 45263827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 6358150 - 6358314
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||| ||||||||| ||| ||||||| | ||||||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| || |||||||    
T  6358150 ctttcacaccggttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaa 6358249  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
     | | ||||| ||| ||| |||||| |||  |||| |||| || |||||||||||||||| ||||    
T  6358250 tctggtattccccggatacgtcctttgaatgagcttcttgccactggagcccaaacaactcggtt 6358314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 500
Target Start/End: Complemental strand, 16325702 - 16325602
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||| | |||||||||||||||||||  | |||||||||||| |||||| |||  ||| ||  ||| ||||||||||    
T  16325702 ctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 16325603  T
Q  500 c 500  Q
    |    
T  16325602 c 16325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 38962870 - 38962706
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| ||||| || ||||||||| ||||||||||||| || ||  | ||||||||||||||||||| ||| |||| ||   || |  |||||||    
T  38962870 ctttcgcaccagtttctgacccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaa 38962771  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||| ||| ||||||  ||  ||||||||  || ||||| |||||||||||||||    
T  38962770 cccggtattccccggatacgtccttgaaatgagctccttaccactggagtccaaacaacttggtt 38962706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 406 - 566
Target Start/End: Original strand, 39201513 - 39201673
Alignment:
Q  406 caccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgat 505  Q
    ||||||||||||| ||||||||| || |||||||||| |||||  | |||||||||||| |||||| ||||| || ||  ||| | ||||||||  || |    
T  39201513 caccggtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacattgttccccctgagaatcgaattcggt 39201612  T
Q  506 attctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    ||||  ||| || |||||| |||| ||||||||| || |  ||||||| ||||||||||||    
T  39201613 attcctcgagtacgtccttggaaggagctccttgccactatagcccaatcaacttggttta 39201673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 41031905 - 41032068
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||| ||||||||| ||||||||| |||  |||||||| |||||| | |||||||||||| |||||| |||  ||| ||  ||| ||||||||||    
T  41031905 ctttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 41032004  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| | ||| ||   || |||||| |||| ||||||||| || |||||||||| ||| ||||||    
T  41032005 cccggtgttc-cctggtacgtccttggaaggagctccttgccactggagcccaagcaatttggtt 41032068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 42770650 - 42770814
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| ||| |||||| ||| ||||||||| ||||||| ||||| |||||| | | ||||||||||||||||| ||| |||| ||  ||| | |||| |||    
T  42770650 cttttgcatcggttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaa 42770749  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||   || ||| |||||| |||| ||||| ||| || |||||||||| ||||||||||    
T  42770750 cccggtatttctcggatacgtccttggaaggagctctttgccactggagcccaagcaacttggtt 42770814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 405 - 560
Target Start/End: Complemental strand, 7787158 - 7787003
Alignment:
Q  405 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccga 504  Q
    |||||||||| ||||||||||||||||| ||||||||| |||||| | ||||||||||||| ||||| |||   || ||  ||| || |||||||||||     
T  7787158 gcaccggttttcgatccaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccgg 7787059  T
Q  505 tattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaactt 560  Q
    ||||| |||  || |||||   ||| || |||||| || |||||||||| ||||||    
T  7787058 tattccccgggtacgtcctagaaaggagttccttgccactggagcccaaccaactt 7787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 410 - 564
Target Start/End: Complemental strand, 331598 - 331444
Alignment:
Q  410 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 509  Q
    ||||||| | ||||||||| ||| ||||||||| |||||  | ||||| ||||||||||||| |||  ||| ||  ||| |||||||||||||| |||||    
T  331598 ggtttccaacccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattc 331499  T
Q  510 tccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
     |||  || |||||| |||  ||||| ||| || |||||||||| ||||||||||    
T  331498 cccgggtacgtccttggaaagagctcattgccactggagcccaagcaacttggtt 331444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 3643886 - 3644052
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||  ||||||||| |||||||||||||  ||||  | ||||||||||||||||||| ||| |||| ||   |   | |||| ||    
T  3643886 ctttcgcaacggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaa 3643985  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||| ||||| ||| ||| |||||| |||  ||||||||  || |||||||||| ||||||||||||    
T  3643986 cccggtattccccggatacgtccttggaatgagctcctttccactggagcccaagcaacttggttta 3644052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 29422322 - 29422156
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||| |||||| | ||| ||| |||| || ||| |||  ||| ||  | | || |||||||    
T  29422322 ctttcgcaccgatttccgatccatcaaaggtggacgactaatccggctcgtgcgtaaaggtatgctcattggccaagtgttgttccctctggaaatcgaa 29422223  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||  ||||| |||  || ||||||  ||| |||||||||  | |||||||||||||||||||||||    
T  29422222 cccagtattccccgggtacgtccttgaaaggagctccttgctactggagcccaaacaacttggttta 29422156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 2528340 - 2528505
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| ||||||||  ||| |||||||  ||||||||| ||||   | |||||||||||| |||||  ||| |||| ||  ||| ||||||||||    
T  2528340 ctttcgcaccagtttccgactcactaaagatgagcgactaatccggcttatgtgtagaggcatgcacactgaccaagcgttgttccccctgggaatcgaa 2528439  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| | |||  ||| || |||||| |||| ||||| ||| || |||||||||||||| |||||||    
T  2528440 cccggtgttcctcgagtacgtccttggaaggagctcattgccactggagcccaaacaatttggttt 2528505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 34130301 - 34130464
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||| ||||||||| ||||| | | |||||||||||||||||  | |||||| |||| ||| |||||||||||| || | || |  |||||||    
T  34130301 ctttcgcaccgatttccgatctaccaatggtagacgactaatctggctcatgcgtagagacatgtgcaatggtcaaacgttgttct-cctgaaaatcgaa 34130399  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    || ||||||  || |||| || ||| |||||| ||||||| || ||||| |||||||| |||||||    
T  34130400 cctgatatttccctaatacgt-cttggaagaaactccttgccactggaggccaaacaatttggttt 34130464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 400 - 561
Target Start/End: Complemental strand, 37560280 - 37560119
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||| ||||||||| ||| ||| ||||| ||||||| ||||| |||||| | ||||||||||||||||||  |||||||| ||  ||  | ||||||||    
T  37560280 ctttcacaccggttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaa 37560181  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    || | |||||  ||  || |||||| |||| |||| |||  || ||||||||||||||||||    
T  37560180 cctggtattcctcgggtacgtccttggaaggagcttcttaccactggagcccaaacaacttg 37560119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 453 - 564
Target Start/End: Original strand, 2149246 - 2149358
Alignment:
Q  453 gtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac-ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagccc 551  Q
    ||||||||||||||||||| |||||||||||  ||| | ||||||||| ||| ||||| ||  |||  |||||  |||||| |||||| || ||||||||    
T  2149246 gtagaggcatgcgcactggccaaacgttattcccccagtgaatcgaactccggtattccccagatacatccttgaaagaagttccttgccactggagccc 2149345  T
Q  552 aaacaacttggtt 564  Q
    |||||||||||||    
T  2149346 aaacaacttggtt 2149358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 3811690 - 3811854
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| ||||||| || ||||||||| ||| ||| ||||| |||||  | ||||||||||||||| ||  |||  ||| ||  | | ||||||||||    
T  3811690 ctttcgcatcggtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttccctctgggaatcgaa 3811789  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||||||||  ||| || |||||| |||| || |||||| || || || |||||||||||||||    
T  3811790 cccgatattcctcgagtacgtccttggaaggagttccttgccattgaagaccaaacaacttggtt 3811854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 400 - 480
Target Start/End: Original strand, 9360747 - 9360827
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    ||||||||||||||||||  |||| |||| ||| ||||||||  |||||| | ||||||||||||||||||| ||||||||    
T  9360747 ctttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgtt 9360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 19976806 - 19976970
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||| |||||||| || ||||| ||| ||||||||  | ||   | |||||| |||||||||||  |||||||||||  ||| |  |||||||    
T  19976806 ctttcgcaccgatttccgattcatcaaaggtgggcgactaattcgacttatgcgtagagacatgcgcactgaccaaacgttattccccctgaaaatcgaa 19976905  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||| ||| |||||| |||  |||| |||| || |||||||||||||| ||||||    
T  19976906 cccggtattccccggatacgtccttggaaagagctacttgccactggagcccaaacaatttggtt 19976970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 29653729 - 29653571
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||||    |||||||| ||| ||||||||  |||||| | ||||||||||||||||||  ||| |||| ||||||| || |||||||    
T  29653729 ctttcgcaccggtttcc----caccaaaggtgg-cgactaattcggctcgtgcgtagaggcatgcgcactgcccaagcgttgttttccctggaaatcgaa 29653635  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
     ||| ||||  | || || |||||| ||||||| || ||| || ||||| |||||||||||||||    
T  29653634 tccggtatttccggagtacgtccttggaagaagttcattgccactggag-ccaaacaacttggtt 29653571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 405 - 503
Target Start/End: Complemental strand, 10669694 - 10669596
Alignment:
Q  405 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccg 503  Q
    |||||||||||||| ||||||||| || |||| ||||| | |||| | |||||| |||||||||||| ||| |||| || |||| ||||||| ||||||    
T  10669694 gcaccggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgttctccctgggaatcaaacccg 10669596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 400 - 538
Target Start/End: Complemental strand, 35946845 - 35946708
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| |||||||| ||||||| | ||||||||||||| |||||| | |||||||||||| || ||| ||| ||||  || |||  |||||||||    
T  35946845 ctttcgcaccagtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgtt-gttcccctaggaatcgaa 35946747  T
Q  500 cccgatattctccgaataagtccttcgaagaagctcctt 538  Q
    | || ||||| ||| ||| |||||| |||  ||||||||    
T  35946746 ctcggtattccccggatacgtccttagaatgagctcctt 35946708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 401 - 470
Target Start/End: Complemental strand, 2785038 - 2784969
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 470  Q
    ||||||||||||||||||  || ||| ||||||||||||||||| |||  | ||||||||||||||||||    
T  2785038 tttcgcaccggtttccgactcatcaatgatggacgactaatctgactcatgcgtagaggcatgcgcactg 2784969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 401 - 469
Target Start/End: Original strand, 3042503 - 3042571
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 469  Q
    ||||||| || ||| ||||| || |||||||||||||||||||| |||||  |||||||||||||||||    
T  3042503 tttcgcatcgattttcgatcaactaaagatggacgactaatctgcctcgcacgtagaggcatgcgcact 3042571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 24179655 - 24179595
Alignment:
Q  420 ccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    ||||||||||||||||||||||| |||||  | ||||||||||| ||||||| ||||||||    
T  24179655 ccaccaaagatggacgactaatccggctcatgcgtagaggcatgtgcactggccaaacgtt 24179595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 400 - 448
Target Start/End: Original strand, 44548723 - 44548771
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctc 448  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  44548723 ctttcgcaccagtttccgatccatcaaaggtggacgactaatctggctc 44548771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 400 - 488
Target Start/End: Complemental strand, 44773370 - 44773282
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccc 488  Q
    ||||||||||||||||||| ||| ||||| ||  ||||||||| ||||| ||   |||||||||| |||||| |||||||| |||||||    
T  44773370 ctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcacgcacagaggcatgcacactggccaaacgttgttttccc 44773282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 14853365 - 14853530
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagt--agaggcatgcgcactggtcaaacgttattttccccgggaatcg 497  Q
    ||||||||||| |||| ||||||| |||||||||||||||||| | |||  ||||  |||||||| |||||||| |||| ||| ||  ||| |  |||||    
T  14853365 ctttcgcaccgatttc-gatccactaaagatggacgactaatccgactcatgagtagagaggcatacgcactggccaaaagttgttccccctgaaaatcg 14853463  T
Q  498 aacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    || | | ||||| ||| |||  |||||  ||| || |||||| || |||||||||||||||||||||    
T  14853464 aatctggtattccccggatacatccttgaaaggagttccttgccactggagcccaaacaacttggtt 14853530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 15234060 - 15234135
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 475  Q
    |||||||| |||||||||| | | |||||||| |||||||||||  || | | |||||||||||||||||||||||    
T  15234060 ctttcgcatcggtttccgacctatcaaagatgaacgactaatctaacttgtgcgtagaggcatgcgcactggtcaa 15234135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 467
Target Start/End: Original strand, 20116611 - 20116678
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgca 467  Q
    ||||||||||||||||||| ||| ||||| |||||| |||||| |||||  | |||||||||||||||    
T  20116611 ctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgca 20116678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 410 - 509
Target Start/End: Original strand, 33634448 - 33634547
Alignment:
Q  410 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 509  Q
    ||||| ||||||||||||| | || |||||||  |||||| | | || ||||||||||||||  ||||||||||| | | |||||||||||||| |||||    
T  33634448 ggttttcgatccaccaaaggtagatgactaattcggctcgtgcgcagcggcatgcgcactggctaaacgttatttcctctgggaatcgaacccggtattc 33634547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 23500771 - 23500844
Alignment:
Q  490 gggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||||||||||||| |||| || ||| || |||| ||||||||| ||  ||||||||||||||||||||    
T  23500771 gggaatcgaacccgatattccccga-tacgtctttggaaggagctccttgccaccggagcccaaacaacttggtt 23500844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 454 - 564
Target Start/End: Complemental strand, 34356259 - 34356149
Alignment:
Q  454 tagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaa 553  Q
    |||||||||||||||||  |||  ||| ||  ||| || ||||||||||| ||||| ||  ||| |||||| |||  ||||||||| || ||||||||||    
T  34356259 tagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattccccagatacgtccttggaaatagctccttgccactggagcccaa 34356160  T
Q  554 acaacttggtt 564  Q
    |||||||||||    
T  34356159 acaacttggtt 34356149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 503 - 564
Target Start/End: Original strand, 3598854 - 3598915
Alignment:
Q  503 gatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||||| ||||||| |||||| |||| ||||| |||||| |||||||| ||||||||||||    
T  3598854 gatattccccgaatacgtccttggaaggagctcattgtcagtggagccccaacaacttggtt 3598915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 561
Target Start/End: Original strand, 3848913 - 3849074
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||  ||| ||| ||| ||||| || |||||||||| | |||| | |||||| ||||||| |||| |||||||| ||| ||| |  |||||||    
T  3848913 ctttcgcaccaattttcgacccatcaaaggtgaacgactaatccgactcgtgcgtagagacatgcgccctggccaaacgttgtttcccctgataatcgaa 3849012  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    |||| ||||||||  ||| ||||||  ||  | |||||| ||| |||||| ||| |||||||    
T  3849013 cccggtattctccagatacgtccttgaaatgaactccttatcactggagctcaagcaacttg 3849074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 441
Target Start/End: Complemental strand, 44023402 - 44023361
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaat 441  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  44023402 ctttcgcaccggtttccaacccaccaaagatggacgactaat 44023361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 792261 - 792213
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctc 448  Q
    |||| |||||||||||||| ||||||||||||| ||||||||| |||||    
T  792261 cttttgcaccggtttccgacccaccaaagatgggcgactaatccggctc 792213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 27726047 - 27725976
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    ||||| ||||||||||||| ||||||  | ||| ||||||||| |||| | | |||||||||||||||||||    
T  27726047 ctttcacaccggtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcactgg 27725976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 28525454 - 28525525
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    ||||| |||| |||||||| |||  |||| |||| |||||||| |||||| | |||||||||||||||||||    
T  28525454 ctttcacaccagtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactgg 28525525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 34346286 - 34346357
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    ||||||||||||||||||| ||||||||| ||  ||| ||||||| |||  | |||||||||||| ||||||    
T  34346286 ctttcgcaccggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactgg 34346357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 18846220 - 18846290
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 470  Q
    ||||||||||||||| ||||||| ||| ||||  ||| ||||||||||||   ||| ||||||||||||||    
T  18846220 ctttcgcaccggttttcgatccatcaatgatgagcgattaatctggctcgtacgtaaaggcatgcgcactg 18846290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 9e-33; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 1538539 - 1538375
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||| | ||||||| ||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  1538539 ctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 1538440  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||||||| |||||  |||| ||||||||| || |||||||||||||||||||||    
T  1538439 cccggtattccccgaatacgtcctcggaaggagctccttgccactggagcccaaacaacttggtt 1538375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 42086435 - 42086271
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| |||||  | ||||||||||||||||||||||| |||| ||  ||| ||||||||||    
T  42086435 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaa 42086336  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| |||||  ||  || |||||| |||| ||||||||| ||  ||||||||| ||||||||||    
T  42086335 cccggtattcctcgggtacgtccttggaaggagctccttgccaccggagcccaagcaacttggtt 42086271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 3653913 - 3654077
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| |||||||||| ||||||||||||| ||||||||||||| | |||| | ||||||||||||||||||||||| |||  | ||| |  |||||||||    
T  3653913 cttttgcaccggttttcgatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgt--tgttctctaggaatcgaa 3654010  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||| |||||||||  || |||||| |||  ||||| |||||| |||||||||||||||||||||||    
T  3654011 cccggtattctccgggtacgtccttggaaagagctcattgtcactggagcccaaacaacttggttta 3654077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 8513627 - 8513463
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||| ||||||| ||| | || ||| |||  |||||||||    
T  8513627 ctttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaa 8513528  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| |||  || |||||| |||| ||||||||| || | ||| |||| ||||||||||    
T  8513527 cccggtattccccgggtacgtccttggaaggagctccttgccacttgagtccaagcaacttggtt 8513463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 5731919 - 5732084
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| |||| |||| || ||||||||||||||||    ||||||||||||||||||| ||| |||| ||   || ||||||||||    
T  5731919 ctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 5732018  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| ||||| |||  || |||||| |||| ||||||||| || |||||||||| |||||||||||    
T  5732019 cccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggttt 5732084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 401 - 565
Target Start/End: Complemental strand, 20525945 - 20525781
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||||||||||||||||||||| | ||||||||||||| |||||  | |||||||||||||||||||  ||  ||| ||   || |||||||||||    
T  20525945 tttcgcaccggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaac 20525846  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    ||||||||| ||| |||  |||||  ||| ||||||||| || |||||||||| |||||||||||    
T  20525845 ccgatattccccggatacatccttgaaaggagctccttgccactggagcccaagcaacttggttt 20525781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 401 - 564
Target Start/End: Complemental strand, 37263347 - 37263185
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    ||||||||||||||||||||||  |||| ||||||||||||| |||||| | ||||||||||||||| ||| ||| ||||  || ||| | |||||||||    
T  37263347 tttcgcaccggtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgtt-gttcccctgagaatcgaac 37263249  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||||||| |||  || |||||| |||| | ||||||| || |||||||||| ||||||||||    
T  37263248 ccgatattccccgggtacgtccttagaaggaactccttgccactggagcccaagcaacttggtt 37263185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 42861217 - 42861383
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||| ||||| ||||||| | ||||||| ||||| |||||  | ||||||||||||||||||| |||  ||| ||| ||  || ||| |||    
T  42861217 ctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttccctgggaaattgaa 42861316  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||||||||| ||| ||| |||||| |||  ||||||||| || |||||||||||||| ||||||||    
T  42861317 cccgatattccccggatatgtccttggaatgagctccttgccactggagcccaaacaatttggttta 42861383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 41163459 - 41163623
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| |||||||| |||| |||| |||||||||||||  ||||  | |||||| |||| ||||||| |||||||| ||  ||| ||||||||||    
T  41163459 ctttcgcaccagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgttgttc-ccctgggaatcgaa 41163557  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| ||||| |||  || || ||| |||| ||||||||| || ||||||||||||||||||||||    
T  41163558 cccggtattccccgggtacgttcttggaaggagctccttgccactggagcccaaacaacttggttt 41163623  T

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Target: chr5; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 19572832 - 19572668
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||| ||||||| | ||||||| | || |||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| ||||||| ||    
T  19572832 ctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaa 19572733  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||| ||| |||||| |||| ||||||||| || |||||||||| ||||||||||    
T  19572732 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 19572668  T

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Target: chr5; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 25417182 - 25417345
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || ||||||| | |  | |||||||| ||||||   ||||||||||||||||||| ||| |||| ||  ||| ||||||||||    
T  25417182 ctttcgcaccggtttctgacccaccaatggtaaatgactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 25417281  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| |||| || |||||| |||| ||||||||| || ||||||||||| |||||||||    
T  25417282 cccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaaa-aacttggtt 25417345  T

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Target: chr5; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 401 - 513
Target Start/End: Original strand, 42291505 - 42291617
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||||||||||||||||| ||||| ||||||||||||| |||||| | ||||||||||| ||||||| ||| |||| ||  ||| ||||||| |||    
T  42291505 tttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaac 42291604  T
Q  501 ccgatattctccg 513  Q
    ||| |||||||||    
T  42291605 ccggtattctccg 42291617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 400 - 567
Target Start/End: Complemental strand, 12705122 - 12704955
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || ||||||||| ||| ||||||||| || ||  | ||||| |||||| |||||||||| |||| ||   ||  |||||||||    
T  12705122 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaa 12705023  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttac 567  Q
    |||| ||||| |||  || |||||| |||| ||||||||| || ||||| ||||||||||||||||||    
T  12705022 cccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggtttac 12704955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 20682616 - 20682783
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||| | |||| |||| ||| ||| ||||| |||||| | ||||||||||||||||||| ||| |||| ||  ||| || |||| ||    
T  20682616 ctttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatctaa 20682715  T
Q  500 cccgatattctccgaataagtccttcgaa-gaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    ||| |||||| |||  || |||||| ||| | |||||||||||| |||||||||| ||||||||||||    
T  20682716 cccaatattccccgggtacgtccttagaatggagctccttgtcactggagcccaagcaacttggttta 20682783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 400 - 510
Target Start/End: Complemental strand, 9805112 - 9805002
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| |||||||| ||||||||| ||||||||||||| |||||  | ||||||||||||||||||| ||| |||| ||  ||| ||||||||||    
T  9805112 ctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 9805013  T
Q  500 cccgatattct 510  Q
    |||| ||||||    
T  9805012 cccggtattct 9805002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 24499090 - 24498927
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||  ||||| | ||||||||||||||| | ||||| ||||||   |||||||||||||||||| |||| ||||||||| |   | |||||||    
T  24499090 ctttcgcaccaatttccaacccaccaaagatggactattaatccggctcgtacgtagaggcatgcgcactgatcaagcgttatttt-cttagaaatcgaa 24498992  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||||||  ||| |||||| |||| |||||||||  | | |||||||||||||| ||||    
T  24498991 cccgatattctccagatacgtccttggaaggagctccttgctactagagcccaaacaactcggtt 24498927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 400 - 567
Target Start/End: Complemental strand, 9812980 - 9812813
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || ||||||||| ||| ||||||||| || ||  | ||||| |||||| |||||| ||| |||| ||   ||  |||||||||    
T  9812980 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgttcctcctcggaatcgaa 9812881  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttac 567  Q
    |||| ||||| |||  || |||||| |||| ||||||||| || ||||| ||||||||||||||||||    
T  9812880 cccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggtttac 9812813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 400 - 539
Target Start/End: Original strand, 14588616 - 14588755
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| ||   |||||||| ||||||||||||| |||||  | ||||||||||||||||||||||| |||||||   || |  |||||||    
T  14588616 ctttcgcaccggttttcggctcaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaa 14588715  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttg 539  Q
    |||||||||| ||  ||| ||||||  |||||||||||||    
T  14588716 cccgatattccccagatacgtccttgaaagaagctccttg 14588755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 18136275 - 18136443
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaat----ctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaat 495  Q
    |||| |||||||||||||| ||||||| | ||||||||||||    | |||||  | |||||||||||| |||||  |||  ||| ||  ||| ||||||    
T  18136275 cttttgcaccggtttccgacccaccaatggtggacgactaattaatccggctcatgtgtagaggcatgcacactgaccaagtgttgttccccctgggaat 18136374  T
Q  496 cgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||| ||||||||| ||| ||| || |||| ||||||||| || |||||||||||||||||||||    
T  18136375 cgaacccggtattctccggatacgtctttggaaggagctccttgccactggagcccaaacaacttggtt 18136443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 23383765 - 23383592
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| |||||||| ||||||||| |||||||||||||  ||||  | ||||||||| ||||||||| ||| |||| ||  ||| ||||||||||    
T  23383765 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaa 23383666  T
Q  500 cccgatatt-ctccga--------ataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| |||| ||| ||        ||| |||||| |||| ||||||||| || |||||||||||||||||||||    
T  23383665 cccggtattcctctgatacgtctgatacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 23383592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 400 - 567
Target Start/End: Complemental strand, 12766239 - 12766072
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || ||||||||| ||| |||||||||||| ||  | |||||||||||| |||||| ||| | || ||   ||   ||||||||    
T  12766239 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaagcattgttcctcctcagaatcgaa 12766140  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttac 567  Q
    |||| ||||| |||  || |||||| |||| ||||||||| || | ||| ||||||||||||||||||    
T  12766139 cccggtattccccgggtacgtccttggaaggagctccttgccactcgagtccaaacaacttggtttac 12766072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 412 - 571
Target Start/End: Complemental strand, 24875441 - 24875282
Alignment:
Q  412 tttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctc 511  Q
    ||||||| ||| ||||| ||||||| ||||| |||||| | |||||| ||||||||||||||||||||| || ||||   |||||||||| ||||||||     
T  24875441 tttccgacccatcaaaggtggacgattaatccggctcgtgcgtagagacatgcgcactggtcaaacgttgttctccctaagaatcgaacctgatattctt 24875342  T
Q  512 cgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttacattt 571  Q
     |  || |||||| ||| |||||||||| |  | ||||||||  ||||||||||| ||||    
T  24875341 tgggtacgtccttggaataagctccttgccgctagagcccaagtaacttggtttagattt 24875282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 30349687 - 30349521
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||  ||||| ||| ||||||||||||   ||||  |  |||||||||||||||||| ||| | || ||  |||  | |||| ||    
T  30349687 ctttcgcaccggtttccggcccacctaaggtggacgactaattcagctcatgcatagaggcatgcgcactggccaatcattgttccccctagaaatcaaa 30349588  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||| ||||| ||| ||| |||||| |||| | ||||||| || |||||||||||||||||||||||    
T  30349587 cccggtattccccggatacgtccttggaaggaactccttgccactggagcccaaacaacttggttta 30349521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 420 - 564
Target Start/End: Original strand, 14974343 - 14974485
Alignment:
Q  420 ccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataag 519  Q
    ||||||||| ||||||||||||| |||||  | ||||||||||| ||||||| |||| ||| ||  ||    |||||||||||||||||||||| ||| |    
T  14974343 ccaccaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactggccaaatgttgttcccctttagaatcgaacccgatattctccggatacg 14974442  T
Q  520 tccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||| |||  ||||||||| ||  ||||||||| ||||||||||    
T  14974443 tccttagaatgagctccttgcca--ggagcccaagcaacttggtt 14974485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 509
Target Start/End: Original strand, 23247351 - 23247459
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| ||| ||| ||||| |||||||||||||||||||| | ||||||||||||  |||| |||| |||| ||   || ||||||||||    
T  23247351 ctttcgcaccggttttcga-ccatcaaaggtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaagcgttgttcctcctgggaatcgaa 23247449  T
Q  500 cccgatattc 509  Q
    ||||||||||    
T  23247450 cccgatattc 23247459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 509
Target Start/End: Original strand, 38897718 - 38897826
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||| ||||||||||||||||||| ||| | ||||||| |||||| | ||||||||||||||||||| ||| ||||  || ||| || |||||||    
T  38897718 ctttcgcactggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgtt-gttcccctggaaatcgaa 38897816  T
Q  500 cccgatattc 509  Q
    |||| |||||    
T  38897817 cccggtattc 38897826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 517
Target Start/End: Complemental strand, 40117523 - 40117406
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| ||||||||||||| || |||| ||||| |||||  | ||||||||||||||||||| ||| |||| ||  ||| || |||||||    
T  40117523 ctttcgcaccggttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaa 40117424  T
Q  500 cccgatattctccgaata 517  Q
      |||||||| |||||||    
T  40117423 ttcgatattccccgaata 40117406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 480
Target Start/End: Complemental strand, 7617028 - 7616948
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    |||||||||| ||||||||||||||||  |||||||||||||||| |||  | ||||||||||||  ||||||||||||||    
T  7617028 ctttcgcaccagtttccgatccaccaataatggacgactaatctgactcatgcgtagaggcatgcatactggtcaaacgtt 7616948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 21375459 - 21375383
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaa 476  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| | |||  | ||||| ||||||||||||||||||    
T  21375459 ctttcgcactggtttccgatccatcaaagatggacgactaatccgactcatgcgtagaagcatgcgcactggtcaaa 21375383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 400 - 567
Target Start/End: Complemental strand, 7866689 - 7866522
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||| ||||||  | ||||||||| ||| ||||||||| || ||| | |||||||||||| |||||| ||| |||| ||   ||  |||||||||    
T  7866689 ctttcgcactggtttctaacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaa 7866590  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttac 567  Q
    |||| |||||  ||  || |||||| |||| ||||||||| || ||||| |||| |||||||||||||    
T  7866589 cccggtattcctcgggtacgtccttggaaggagctccttgccactggagtccaagcaacttggtttac 7866522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 400 - 483
Target Start/End: Complemental strand, 43399236 - 43399153
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttatt 483  Q
    ||||||||||||||||||| | ||||||  |||||||||||||  ||||| | ||||||||||||||||||| ||| |||||||    
T  43399236 ctttcgcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaagcgttatt 43399153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 400 - 561
Target Start/End: Complemental strand, 20693041 - 20692880
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||  ||  |   ||||||||| | ||||| ||| |||| ||| | |  |||||| ||    
T  20693041 ctttcgcaccggtttccgacccaccaaaggtggacaactaatctgaatcatgcacagaggcatgtgtactggccaagcgttgtttcctctaggaatcaaa 20692942  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    |||| ||||| |||  || |||||| |||||||||| ||| || | ||||||||||||||||    
T  20692941 cccggtattccccgggtacgtccttggaagaagctctttgccactagagcccaaacaacttg 20692880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 400 - 509
Target Start/End: Complemental strand, 41801085 - 41800976
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||| ||||| ||||||| ||| |||||||| |||||||||| |||||| | |||||| |||||||| ||||||| |||| ||  ||  | ||||||||    
T  41801085 ctttcacaccgctttccgacccatcaaagatgaacgactaatccggctcgtgcgtagagacatgcgcattggtcaagcgttgttccccttgagaatcgaa 41800986  T
Q  500 cccgatattc 509  Q
    ||||||||||    
T  41800985 cccgatattc 41800976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 410 - 564
Target Start/End: Original strand, 18294493 - 18294646
Alignment:
Q  410 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccggga-atcgaacccgatatt 508  Q
    ||||||||| ||||||||||||| ||| ||||| || ||  | ||||||| ||||||||||  ||| |||| ||  |||| ||| || ||||||| ||||    
T  18294493 ggtttccgacccaccaaagatgggcgattaatccggttcatgtgtagaggtatgcgcactgaccaagcgttgtt--cccctggatattgaacccggtatt 18294590  T
Q  509 ctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||| || |||||| |||| || ||||||||| || || |||||||||||||||    
T  18294591 ctccgagtatgtccttggaaggagttccttgtcactgaagtccaaacaacttggtt 18294646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 424 - 564
Target Start/End: Complemental strand, 26077225 - 26077085
Alignment:
Q  424 caaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtcct 523  Q
    ||||||||  ||| |||||||||||| | ||||||||||| ||||||| ||| |||| ||  | | ||||||||||||   ||||| || |||| |||||    
T  26077225 caaagatgagcgattaatctggctcgtgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtcct 26077126  T
Q  524 tcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    | |||  ||||||||  || |||||||||||||||||||||    
T  26077125 tggaatgagctccttaccactggagcccaaacaacttggtt 26077085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 400 - 448
Target Start/End: Original strand, 27648424 - 27648472
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctc 448  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||    
T  27648424 ctttcgcatcggtttccgatccaccaaagatggacgactaatccggctc 27648472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 453 - 565
Target Start/End: Complemental strand, 28857183 - 28857071
Alignment:
Q  453 gtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagccca 552  Q
    ||||||||||||||||||| |||  ||| ||  ||| |||||||||||||| ||||| |||  |  |||||| |||| ||||||||| || |||||||||    
T  28857183 gtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagccca 28857084  T
Q  553 aacaacttggttt 565  Q
    | |||||||||||    
T  28857083 agcaacttggttt 28857071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 20255477 - 20255402
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 475  Q
    |||||||||| ||||||||  |||||||| ||||||||||||| | |||  | |||||||||||||||||||||||    
T  20255477 ctttcgcaccagtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaa 20255402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 407 - 561
Target Start/End: Original strand, 7308370 - 7308524
Alignment:
Q  407 accggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgata 506  Q
    ||||||||  |||||| ||||| ||  ||||||||| |||||  | ||||||||||| ||||||  ||| |||| ||  ||| |||||||||||||||||    
T  7308370 accggtttttgatccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgata 7308469  T
Q  507 ttctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    |||  | |||| |||||| |||  ||||||||| || | || |||||||||||||    
T  7308470 ttcctcaaatacgtccttggaatgagctccttgccactagaacccaaacaacttg 7308524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 12082016 - 12081887
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||| ||||| |||||||  |||||||| ||||||||||||  |||||| | ||||| ||||||||||||| ||| |||| ||  ||| | ||||||||    
T  12082016 ctttcacaccgatttccgactcaccaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaa 12081917  T
Q  500 cccgatattctccgaataagtccttcgaag 529  Q
    |||  ||||| ||| ||| |||||| ||||    
T  12081916 cccagtattccccggatacgtcctttgaag 12081887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 20228825 - 20228756
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 469  Q
    ||||| || ||||||| |||||||||||||||| ||||||||||| |||| | |||||||||| ||||||    
T  20228825 ctttcacatcggtttctgatccaccaaagatgggcgactaatctgactcgtgtgtagaggcatacgcact 20228756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 400 - 480
Target Start/End: Original strand, 18262617 - 18262697
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    ||||||||||| ||| ||||||| || || ||| ||||||||| |||||| | ||||||| ||||||||||||||| ||||    
T  18262617 ctttcgcaccgattttcgatccatcagaggtgggcgactaatccggctcgtgtgtagaggtatgcgcactggtcaagcgtt 18262697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 13664368 - 13664297
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    |||||||||||||||||||  |||||||| ||  ||| |||||||||||  | |||||||||||||||||||    
T  13664368 ctttcgcaccggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactgg 13664297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 39099778 - 39099849
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    |||| |||||||||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||| |||||||    
T  39099778 cttttgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactgg 39099849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 40773381 - 40773306
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 475  Q
    |||||||||||||||||||  ||||||||||| |||||||||| | ||||   ||||||||||||||  |||||||    
T  40773381 ctttcgcaccggtttccgacgcaccaaagatgaacgactaatccgactcgtatgtagaggcatgcgctttggtcaa 40773306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 17693339 - 17693405
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaa-gatggacgactaatctggctcgcgagtagaggcatgcg 465  Q
    ||||||||||||||||| | |||||||| || ||||||||||||||||||  | |||||||||||||    
T  17693339 ctttcgcaccggtttccaacccaccaaaagacggacgactaatctggctcatgcgtagaggcatgcg 17693405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 4016254 - 4016418
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||| ||||||||| ||||||| | ||  | ||||||| |||||| | ||||||||||||||||||| |||  ||| ||  ||| |  |||||||    
T  4016254 ctttcgcactggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaa 4016353  T
Q  500 cccgata-ttctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||||| ||||| |  || |||||| |||  |||| |||| || ||||||||| |||||||||||    
T  4016354 cccgatatttctcag-gtacgtccttggaatgagcttcttgccactggagcccatacaacttggtt 4016418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 509
Target Start/End: Complemental strand, 7336727 - 7336619
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||   ||||||||||| | ||||| ||||| |||||| | |||||||||||||||||| | || |||| || |||   | |||||||    
T  7336727 ctttcgcaccggttttt-atccaccaaaggtagacgattaatccggctcgtgcgtagaggcatgcgcactgataaagcgttgttctccttagaaatcgaa 7336629  T
Q  500 cccgatattc 509  Q
    ||||||||||    
T  7336628 cccgatattc 7336619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 501
Target Start/End: Original strand, 22655157 - 22655257
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||| ||||| ||| |||| |||| ||||||||||||||| ||   | |||||||||||| ||||| |||||| || ||| ||| ||||||||||    
T  22655157 ctttcgcactggttttcgacccac-aaaggtggacgactaatctgacttatgcgtagaggcatgcacactgatcaaacattgtttcccctgggaatcgaa 22655255  T
Q  500 cc 501  Q
    ||    
T  22655256 cc 22655257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 418 - 539
Target Start/End: Complemental strand, 30995211 - 30995090
Alignment:
Q  418 atccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaata 517  Q
    ||||||||||||||  ||||||||| |||||| | |||||||||||||| |||| |||  ||| ||  ||| |||||||||||| | ||||| ||   ||    
T  30995211 atccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtattccccatgta 30995112  T
Q  518 agtccttcgaagaagctccttg 539  Q
     |||||| |||| |||||||||    
T  30995111 cgtccttggaaggagctccttg 30995090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 424 - 509
Target Start/End: Original strand, 35813021 - 35813106
Alignment:
Q  424 caaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 509  Q
    ||||| ||||||||||||| | |||  | |||||| |||||||||||||||| | |||||| |||  ||||||||||||| |||||    
T  35813021 caaaggtggacgactaatccgactcatgtgtagagacatgcgcactggtcaagcattatttcccctaggaatcgaacccggtattc 35813106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 492 - 564
Target Start/End: Original strand, 6767142 - 6767214
Alignment:
Q  492 gaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||||| ||||| |||  || |||||| |||| ||||||||| || |||||||||| ||||||||||    
T  6767142 gaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 6767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 400 - 480
Target Start/End: Complemental strand, 21149842 - 21149762
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    |||||||| |||||| | ||||||||| | ||| |||||||||   |||| | |||||| |||||||||||||||||||||    
T  21149842 ctttcgcatcggttttctatccaccaatggtgggcgactaatccaactcgtgcgtagagtcatgcgcactggtcaaacgtt 21149762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 492 - 564
Target Start/End: Original strand, 35403603 - 35403675
Alignment:
Q  492 gaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||||| ||||  |||| || |||||| |||| ||||||||| || |||||||||||||| ||||||    
T  35403603 gaatcgaacccggtatttcccgagtacgtccttggaaggagctccttgccactggagcccaaacaagttggtt 35403675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 492 - 575
Target Start/End: Complemental strand, 1826873 - 1826790
Alignment:
Q  492 gaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttacattttatt 575  Q
    |||||||||| ||||||| |||| || ||| || |||| ||||| |||  | || ||||||||||||||||||| |||||||||    
T  1826873 gaatcgaacctgatattccccgagtacgtctttggaaggagctcattgctactgaagcccaaacaacttggttttcattttatt 1826790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 406 - 469
Target Start/End: Original strand, 6764462 - 6764525
Alignment:
Q  406 caccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 469  Q
    |||| |||||||| ||| ||||||| | ||||||||| |||||| | |||||||||||||||||    
T  6764462 caccagtttccgacccaacaaagataggcgactaatccggctcgtgcgtagaggcatgcgcact 6764525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 491 - 565
Target Start/End: Complemental strand, 2485214 - 2485140
Alignment:
Q  491 ggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    ||||||||||||  ||||| | ||||| |||||| |||  ||||||||| || ||||| ||||||||||||||||    
T  2485214 ggaatcgaacccagtattccctgaatacgtccttggaatgagctccttgccattggagtccaaacaacttggttt 2485140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 14728191 - 14728121
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 470  Q
    ||||||||||||||||||| ||| ||||| ||  | ||||||| |||||  | ||||||||||||||||||    
T  14728191 ctttcgcaccggtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactg 14728121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 28856995 - 28856921
Alignment:
Q  490 gggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||||||| ||||| |||  |  |||||| |||| ||||||||| || |||||||||| ||||||||||    
T  28856995 gggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttggtt 28856921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 465 - 563
Target Start/End: Complemental strand, 36783291 - 36783193
Alignment:
Q  465 gcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggt 563  Q
    ||||||||||||| |  ||| |||  ||||||||||| ||||||| |||| ||  ||||| | || || ||||||||| | ||||||||||||||||||    
T  36783291 gcactggtcaaacatcgtttcccctaggaatcgaacctgatattccccgagtacatccttggcaggagatccttgtcactagagcccaaacaacttggt 36783193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 459 - 556
Target Start/End: Complemental strand, 1899050 - 1898953
Alignment:
Q  459 gcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaaca 556  Q
    ||||||||||||| ||| |||| ||  ||| |||||||||||||| ||||| |||  ||  ||||| |||| ||||||||| || || ||||||||||    
T  1899050 gcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacatccttggaaggagctccttgccactgtagcccaaaca 1898953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 409 - 470
Target Start/End: Complemental strand, 15034174 - 15034113
Alignment:
Q  409 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 470  Q
    |||||||||||||| ||||| ||||| ||||||| |||||  | |||||||||||| |||||    
T  15034174 cggtttccgatccatcaaaggtggacaactaatcaggctcatgcgtagaggcatgcacactg 15034113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 18045746 - 18045682
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcg 465  Q
    |||||||| ||||||||||||||| |||| ||||||| ||||| |||||  | |||||||||||||    
T  18045746 ctttcgcatcggtttccgatccactaaaggtggacgattaatc-ggctcatgtgtagaggcatgcg 18045682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 25453032 - 25452956
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 477  Q
    |||| |||||||||| ||| | || |||| ||| ||||||||| |||||| | |||||||||||| ||||||||||||    
T  25453032 cttttgcaccggttttcgaccgactaaagttgg-cgactaatccggctcgtgcgtagaggcatgcacactggtcaaac 25452956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 2e-30; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 8141213 - 8141049
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| ||||||| || ||||||||  ||||||||||||   ||||  | ||||||||||||||||||| ||| |||| ||| ||| || |||||||    
T  8141213 ctttcgcatcggtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaa 8141114  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||||||| |||||| |||| ||||||||| || |||||||||||||||||||||    
T  8141113 cccggtattccccgaatacgtccttggaagcagctccttgccactggagcccaaacaacttggtt 8141049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 14666070 - 14666234
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| ||| |||||||   ||| |||||||||||||| | | ||||||||||||||||||| |||  ||| ||| ||| ||||||||||    
T  14666070 ctttcgcaccggttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaa 14666169  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||| ||| |||||| |||  ||||||||| || |||||||||| ||||||||||    
T  14666170 cccggtattccccggatacgtccttggaatgagctccttgccactggagcccaagcaacttggtt 14666234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 24837353 - 24837187
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| |||||||||||||||||| |||||||||||||  ||||| |  ||||||||||  |||||| ||| |||| || |||| ||||||||||    
T  24837353 ctttcgcaccagtttccgatccaccaaaggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgttctccctgggaatcgaa 24837254  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    | || ||||| |||  || || ||| |||| ||||||||| || |||||||||| ||||||||||||    
T  24837253 cacggtattccccgggtacgtacttggaaggagctccttgccactggagcccaagcaacttggttta 24837187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 18374121 - 18373955
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| |||||||||| ||| ||||||||| ||||||||||||| |||||  | ||||||||||||||||||||||| |||| || |||| | ||||||||    
T  18374121 cttttgcaccggttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaa 18374022  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    || | ||||  ||| |||  || || |||  ||||||||| || ||||||||||||||||| |||||    
T  18374021 cctggtatttcccggatatatctttggaatgagctccttgccattggagcccaaacaacttagttta 18373955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 8997543 - 8997708
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||  | ||| ||||||||| |||||  ||||||| ||  ||   |||||||||    
T  8997543 ctttcgcaccggtttccgacccaccaaagatgaacgactaatctggctcatgcgtataggcatgcgaactggcgaaacgttgttccccttaggaatcgaa 8997642  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    | || ||||| ||||||| ||||||  ||| || |||||| || ||||| |||| |||||||||||    
T  8997643 cacggtattccccgaatatgtccttgaaaggagttccttgccactggagtccaagcaacttggttt 8997708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 9859994 - 9860159
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| ||| |||||||||||||||||| | |||||||||||||||||||  | |||||||||||| |||||| |||  ||| ||  ||| ||||||||||    
T  9859994 cttttgcatcggtttccgatccaccaatggtggacgactaatctggctcatgtgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 9860093  T
Q  500 cccgatatt-ctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| |||| | ||| ||| |||||| |||| ||||| ||| || |||| ||||||||||||||||    
T  9860094 cccggtattcccccggatacgtccttggaaggagctctttgccactggatcccaaacaacttggtt 9860159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 401 - 566
Target Start/End: Original strand, 15884556 - 15884720
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||||||||||||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||| | |||  |||  || ||| |||||||||||    
T  15884556 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgtt-gttcccctgggaatcgaac 15884654  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    ||| ||||| ||   || |||||| |||| ||||||||  || |||||||||| ||||||||||||    
T  15884655 ccggtattccccaggtacgtccttggaaggagctccttaccactggagcccaatcaacttggttta 15884720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 2467117 - 2467283
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||||||  ||||||   ||||||||||||| |||||  |  ||||| |||||||||||| |||  ||| ||  ||| || |||||||    
T  2467117 ctttcgcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttccccctggaaatcgaa 2467216  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||| ||||| ||| ||| |||||| |||| ||||||||| || |||||||||| ||||||||||||    
T  2467217 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggttta 2467283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 583923 - 583761
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||  ||||| ||||| ||| ||||||||| | |||  | ||||||||||||||||||||||| |||  | |||||  |||||||||    
T  583923 ctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgt--tgttccctaggaatcgaa 583826  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||   ||| || |||||| |||| ||||||||| || | |||||||||||||||||||    
T  583825 cccggtatttctcgagtacgtccttggaagtagctccttgccactagagcccaaacaacttggtt 583761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 6100583 - 6100419
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||| ||| |||| |||| || |||||||||| |||||  | |||| |||||||||||||| ||| |||| ||   || ||||||||||    
T  6100583 ctttcgcagcggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 6100484  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||| ||| ||||||  ||| ||||||||| || || ||||||||||||||||||    
T  6100483 cccggtattccccggatacgtccttgaaaggagctccttgccactgaagcccaaacaacttggtt 6100419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 10927717 - 10927553
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| |||| |||| || |||||||||| |||||  | ||||||||||||||||||| ||| |||| ||   ||  |||||||||    
T  10927717 ctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaa 10927618  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| |||  || ||||||  ||||||||||||| || || ||||||| ||||||||||    
T  10927617 cccggtattccccgggtacgtccttgaaagaagctccttgccactgaagcccaagcaacttggtt 10927553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 14846686 - 14846523
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||| ||||||| ||||||||| ||||||||| ||||| |||  | ||||||||||||||||||  ||| | ||  || ||| | ||||||||    
T  14846686 ctttcgcaccgatttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactgaccaatcatt-gttcccctgagaatcgaa 14846588  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| |||  || |||||| |||| |||| |||| || |||||||||||||||||||||    
T  14846587 cccggtattccccgggtacgtccttagaaggagcttcttgccagtggagcccaaacaacttggtt 14846523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 43027416 - 43027252
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| ||| ||||||||||||||||||| |||||  | ||||||||||||||| ||| ||| |||| ||   || ||||||||||    
T  43027416 ctttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaa 43027317  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||  ||||| || |||| || |||  ||  ||||| ||| || |||||||||||||||||||||    
T  43027316 cccagtattccccaaatacgttcttgaaatgagctcattgccactggagcccaaacaacttggtt 43027252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 508
Target Start/End: Complemental strand, 43033012 - 43032904
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || ||||||||| ||| ||||||||| |||||| | ||||||||||||||||||| ||| |||| ||  ||| ||||||||||    
T  43033012 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 43032913  T
Q  500 cccgatatt 508  Q
     ||||||||    
T  43032912 tccgatatt 43032904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 409 - 564
Target Start/End: Original strand, 1012985 - 1013140
Alignment:
Q  409 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatatt 508  Q
    |||||| |||||||| |||| || |||| ||||  |||||  | ||||||||||| | ||||| ||| |||| ||  ||| |||||||||||||| ||||    
T  1012985 cggttttcgatccactaaaggtgaacgattaattcggctcatgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtatt 1013084  T
Q  509 ctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    | ||| ||| |||||| ||| |||||||||| || |||||||||| ||||||||||    
T  1013085 ccccggatacgtccttggaaaaagctccttgccactggagcccaagcaacttggtt 1013140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 3418512 - 3418678
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || |||| |||| ||||||||||||||| |||  | ||||| ||||||||||||| |||  ||| ||   ||    |||||||    
T  3418512 ctttcgcaccggtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcctaaaaatcgaa 3418611  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||||||||| ||  ||| |||||| |||| ||||||||| ||  |||| |||||||||||||||||    
T  3418612 cccgatattccccagatacgtccttggaaggagctccttgccacgggagtccaaacaacttggttta 3418678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 17981552 - 17981386
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||||||  |||||||| ||| | ||||||  | |||| | |||||||||||| ||||||||||  ||| ||  ||| ||||||||||    
T  17981552 ctttcgcaccggtttccgactcaccaaagctgggcaactaattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaa 17981453  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||| ||||  |||  ||  ||||| |||| ||||||||| || |||||||||| |||||| |||||    
T  17981452 cccggtatttcccgggtacatccttggaaggagctccttgccactggagcccaagcaacttagttta 17981386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 401 - 510
Target Start/End: Original strand, 4479296 - 4479404
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||||||||||||| ||||||||| |||||||||||||  ||||  | ||||||||||||||||||| ||| ||||  || ||| ||||||||||     
T  4479296 tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgtt-gttcccctgggaatcgaat 4479394  T
Q  501 ccgatattct 510  Q
    ||| ||||||    
T  4479395 ccggtattct 4479404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 568
Target Start/End: Complemental strand, 16894046 - 16893880
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||| |||| |||| |||||  | ||| ||||||| | ||||| ||| |||||||  ||| | ||||||||    
T  16894046 ctttcgcaccggtttccga-ccaccaaaggtgggcgac-aatccggctcatgcgtaaaggcatgtgtactggccaagcgttattccccctgtgaatcgaa 16893949  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttaca 568  Q
    |||||||||| ||| ||| ||| || |||| || |||||| || |  ||||||| ||||||||||||||    
T  16893948 cccgatattccccggatacgtcattggaaggagttccttgccactatagcccaagcaacttggtttaca 16893880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 45521279 - 45521116
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||| ||||| ||  ||||||||| |||||  | |||||||||||||||||| ||||  |||  || ||| ||||||||||    
T  45521279 ctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgtt-gttcccctgggaatcgaa 45521181  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| |||  ||  ||||| |||  | ||||||| || |||||||||| ||||||||||    
T  45521180 cccggtattccccgggtacatccttggaatgaactccttgccactggagcccaagcaacttggtt 45521116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 401 - 564
Target Start/End: Complemental strand, 13085633 - 13085471
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||||||||||||| ||||    ||||| ||| |||||||||||| | ||||||| |||| ||||||  ||||||| ||  | | | |||||||||    
T  13085633 tttcgcaccggtttccgacccacttt-gatgggcgattaatctggctcgtgcgtagaggtatgcacactggctaaacgttgttccctctgagaatcgaac 13085535  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||| ||||| ||| ||| |||||| |||| ||||||| | || |||||||||||||| ||||||    
T  13085534 ccggtattccccggatacgtccttggaaggagctcctcgccactggagcccaaacaagttggtt 13085471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 68097 - 68263
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| |||||||||||||| ||| ||||| || |||| ||||| |||||| | ||| ||||||||  ||||| |||||||| ||   || | ||||||||    
T  68097 cttttgcaccggtttccgacccatcaaaggtgaacgattaatccggctcgtgtgtaaaggcatgcatactggccaaacgttgttcctcctgagaatcgaa 68196  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||||| ||| ||||  | |||||| |||| ||||||||| ||  ||||| ||||||||||| ||||    
T  68197 cccgatcttccccgagcacgtccttggaaggagctccttgccaccggagctcaaacaacttgattta 68263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 22810101 - 22810027
Alignment:
Q  490 gggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||||||||| ||||||| ||| |||||| |||| ||||||||| || | |||||||||||||||||||    
T  22810101 gggaatcgaacccgatgttctccggatacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 22810027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 400 - 561
Target Start/End: Original strand, 34710566 - 34710727
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||| || ||||| ||| ||||||| |||||||||||| || | || | | ||| ||||||||||||| | |||  ||| ||| ||| ||||||||||    
T  34710566 ctttcggactggttttcgacccaccaatgatggacgactagtccgacttgtgtgtaaaggcatgcgcactagccaagtgttgtttcccctgggaatcgaa 34710665  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
     ||| |||| ||||| || |||||| |||||| || |||| ||  |||||||||||||||||    
T  34710666 tccggtattttccgagtacgtccttggaagaaacttcttgccaccggagcccaaacaacttg 34710727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 443 - 564
Target Start/End: Original strand, 38922456 - 38922577
Alignment:
Q  443 tggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtca 542  Q
    ||||||| | ||| ||||||||||||||| ||| |||| ||  | | |||||||||||||| ||||| |||  || |||||| |||| ||||||||| ||    
T  38922456 tggctcgtgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgcca 38922555  T
Q  543 atggagcccaaacaacttggtt 564  Q
     |||||||||| ||||||||||    
T  38922556 ctggagcccaagcaacttggtt 38922577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 400 - 560
Target Start/End: Original strand, 33401799 - 33401958
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| ||||||  ||||||| |||| ||| ||||||||| | |||  | |||||||||||| ||||||||||  ||| ||  ||| |  |||||||    
T  33401799 ctttcgcatcggtttt-gatccactaaaggtgggcgactaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaa 33401897  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaactt 560  Q
    |||| ||||| |||| || ||||||  ||| ||||||||| || |||||||||||||||||    
T  33401898 cccggtattccccgagtacgtccttgaaaggagctccttgccactggagcccaaacaactt 33401958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 44893277 - 44893441
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| |||||||||||||| ||| ||| | ||  ||| ||||| |||||| | |||||||||||| |||||| ||| | || ||  |||  | ||| |||    
T  44893277 cttttgcaccggtttccgacccatcaagggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaa 44893376  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| |||  || |||||| |||| ||||||||| || |||||||||||||||||||||    
T  44893377 cccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 44893441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 453 - 564
Target Start/End: Complemental strand, 29933830 - 29933720
Alignment:
Q  453 gtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagccca 552  Q
    |||||||||||  ||||||||||  ||| || |||| |||||||||||||| ||||||||| |||  | ||| |||| ||||||||| || ||||| |||    
T  29933830 gtagaggcatgtacactggtcaagtgttgttctccctgggaatcgaacccg-tattctccggatacattcttagaaggagctccttgccactggagtcca 29933732  T
Q  553 aacaacttggtt 564  Q
    ||||||||||||    
T  29933731 aacaacttggtt 29933720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 7673657 - 7673816
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||||||||| |||||||| |||||||| |||  |||| |||||| | |||||||||||| |||| | |||||||| ||   |||   ||||||||    
T  7673657 tttcgcaccggttttcgatccactaaagatgggcgaaaaatccggctcgtgcgtagaggcatgcacactagccaaacgttgtt---ccccctaatcgaac 7673753  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
      ||||||| ||  ||| |||||| |||| ||||||||| || ||||| |||| ||||||||||    
T  7673754 ttgatattccccagatacgtccttggaaggagctccttgccactggag-ccaagcaacttggtt 7673816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 407 - 564
Target Start/End: Original strand, 24938568 - 24938725
Alignment:
Q  407 accggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgata 506  Q
    |||||||||||||||| ||||| |||| |||||||| || ||  | ||||||||||||||| ||  |||  ||| |||   |  | ||||||||| | ||    
T  24938568 accggtttccgatccatcaaaggtggatgactaatccggttcatgcgtagaggcatgcgcattgaccaagtgttgtttcatctagaaatcgaacctggta 24938667  T
Q  507 ttctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||  || |||||| || | ||||||||| || |||||||||||||||||||||    
T  24938668 ttctccgggtatgtccttggagggagctccttgccactggagcccaaacaacttggtt 24938725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 39969914 - 39969983
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 469  Q
    |||||||| |||||||||||||| ||| ||||| ||||||||||| |||  | |||||||||||||||||    
T  39969914 ctttcgcatcggtttccgatccatcaatgatgggcgactaatctgactcatgtgtagaggcatgcgcact 39969983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 400 - 568
Target Start/End: Complemental strand, 8817144 - 8816976
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||||||  || ||||||| ||| | ||||| | |||| | |||||||||| |  ||  |||||  ||| ||| |   ||||||||||    
T  8817144 ctttcgcaccggtttccgactcatcaaagatagacaagtaatccgactcgtgcgtagaggcatacataccagtcaagtgttgtttcctatgggaatcgaa 8817045  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttaca 568  Q
    ||||||||||| |||||| ||||||  ||| |||||||| ||| |  || |||||||| ||||||||||    
T  8817044 cccgatattcttcgaatacgtccttaaaaggagctccttatcattaaagtccaaacaatttggtttaca 8816976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 405 - 480
Target Start/End: Complemental strand, 11786021 - 11785946
Alignment:
Q  405 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    |||||||||||||||||| ||||||||  ||| |||||||||||  | |||||||||||| |||||  ||||||||    
T  11786021 gcaccggtttccgatccatcaaagatgagcgattaatctggctcatgcgtagaggcatgcacactgcccaaacgtt 11785946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 430 - 509
Target Start/End: Complemental strand, 20240651 - 20240572
Alignment:
Q  430 tggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 509  Q
    ||||||| | ||||| |||| | ||||||||||||||||||  ||||||||||||| || || |||||||| ||||||||    
T  20240651 tggacgatttatctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattc 20240572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 430 - 509
Target Start/End: Original strand, 20252416 - 20252495
Alignment:
Q  430 tggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 509  Q
    ||||||| | ||||| |||| | ||||||||||||||||||  ||||||||||||| || || |||||||| ||||||||    
T  20252416 tggacgatttatctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattc 20252495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 438 - 564
Target Start/End: Complemental strand, 34846886 - 34846761
Alignment:
Q  438 taatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctcct 537  Q
    |||||||||| | | ||||||||||||  ||||| ||| |||| ||  ||  |||||||||||||| ||||| |||  || |||||| |||  |||||||    
T  34846886 taatctggcttgtgcgtagaggcatgcatactggccaagcgttgttcaccatgggaatcgaacccggtattc-ccgggtacgtccttggaatgagctcct 34846788  T
Q  538 tgtcaatggagcccaaacaacttggtt 564  Q
    || || |||||||||||||||||||||    
T  34846787 tgccactggagcccaaacaacttggtt 34846761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 493 - 566
Target Start/End: Complemental strand, 6940576 - 6940503
Alignment:
Q  493 aatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||||||||||||||| |||| |||  ||||| |||  ||||||||  || |||||||||||||||||||||||    
T  6940576 aatcgaacccgatattttccggatacctccttggaatgagctccttaccactggagcccaaacaacttggttta 6940503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 453 - 566
Target Start/End: Complemental strand, 30903393 - 30903281
Alignment:
Q  453 gtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagccca 552  Q
    |||| |||||||||||||||||| | || ||| ||| |  ||||||| ||| ||||| ||||||| ||| || |||||||||||||   | |||||| ||    
T  30903393 gtagcggcatgcgcactggtcaagcattgttt-ccctgaaaatcgaatccggtattccccgaatacgtcattggaagaagctccttactactggagcgca 30903295  T
Q  553 aacaacttggttta 566  Q
    ||||||||||||||    
T  30903294 aacaacttggttta 30903281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 2964187 - 2964123
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgc 464  Q
    |||||||||||||||| || ||||||||| ||| ||||||||| || ||| | ||||||||||||    
T  2964187 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgc 2964123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 409 - 473
Target Start/End: Complemental strand, 12754127 - 12754063
Alignment:
Q  409 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtc 473  Q
    |||||||||||||| ||||||||  ||||||||||| || | |  ||||||||||||||||||||    
T  12754127 cggtttccgatccatcaaagatgagcgactaatctgacttgtgcatagaggcatgcgcactggtc 12754063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 22212514 - 22212590
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaa 476  Q
    ||||||||||||||| ||| ||||||||| ||  ||||||||| ||| || | ||||| ||||||| ||||||||||    
T  22212514 ctttcgcaccggttttcgaaccaccaaaggtgagcgactaatccggcccgtgcgtagaagcatgcgtactggtcaaa 22212590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 11298266 - 11298337
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    ||||||||||||||||||| ||||||||| ||  ||| |||| ||||||  |  ||||||||||||||||||    
T  11298266 ctttcgcaccggtttccgacccaccaaaggtgagcgattaatttggctcatgcatagaggcatgcgcactgg 11298337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 405 - 480
Target Start/End: Original strand, 13357960 - 13358035
Alignment:
Q  405 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    |||||||||||||| |||| ||||  |||||||||||| |||||| |  ||||||||||| || ||| ||||||||    
T  13357960 gcaccggtttccgacccactaaagggggacgactaatccggctcgtgcatagaggcatgcacattggccaaacgtt 13358035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 400 - 442
Target Start/End: Original strand, 1653859 - 1653901
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatc 442  Q
    ||||||||||||||||||| |||||||  ||||||||||||||    
T  1653859 ctttcgcaccggtttccgacccaccaataatggacgactaatc 1653901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 400 - 442
Target Start/End: Original strand, 1742235 - 1742277
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatc 442  Q
    ||||||||||||||||||| |||||||  ||||||||||||||    
T  1742235 ctttcgcaccggtttccgacccaccaataatggacgactaatc 1742277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 404 - 442
Target Start/End: Original strand, 4772054 - 4772092
Alignment:
Q  404 cgcaccggtttccgatccaccaaagatggacgactaatc 442  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  4772054 cgcaccggtttccgacccaccaaaggtggacgactaatc 4772092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 454 - 564
Target Start/End: Original strand, 34613831 - 34613941
Alignment:
Q  454 tagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaa 553  Q
    |||||||||||| ||||| || ||||| ||   || |||||||||||||||||||| ||| ||| |   || |||| ||||| ||| || ||||||||||    
T  34613831 tagaggcatgcgtactggccagacgttgttcctcctgggaatcgaacccgatattccccggatacggttttggaaggagctcattgccactggagcccaa 34613930  T
Q  554 acaacttggtt 564  Q
    |||| ||||||    
T  34613931 acaatttggtt 34613941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 3568005 - 3567940
Alignment:
Q  410 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 475  Q
    ||||||||| ||||||||| |||| ||||||| ||||||  | ||||||| ||| |||||||||||    
T  3568005 ggtttccgacccaccaaaggtggatgactaatttggctcatgcgtagaggtatgtgcactggtcaa 3567940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 519 - 564
Target Start/End: Complemental strand, 18091393 - 18091348
Alignment:
Q  519 gtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||| ||| |||||||||| || |||||||||||||||||||||    
T  18091393 gtccttggaataagctccttgccactggagcccaaacaacttggtt 18091348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 2e-30; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 48342127 - 48341963
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||  | ||||||||||||||||| | ||| |||| ||  |||  ||||| |||    
T  48342127 ctttcgcacctgtttccgatccaccaaagatggacgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaatagaa 48342028  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||   || |||||| |||| ||||||||| || |||||||||||||||||||||    
T  48342027 cccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 48341963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 409 - 564
Target Start/End: Complemental strand, 49198449 - 49198294
Alignment:
Q  409 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatatt 508  Q
    ||||||| |||||||||| | ||||||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  |||  ||||||||||||| ||||    
T  49198449 cggtttctgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtatt 49198350  T
Q  509 ctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    | ||| ||| |||||| |||||| |||||||||| |||||||||||||||||||||    
T  49198349 ccccggatatgtccttggaagaaactccttgtcactggagcccaaacaacttggtt 49198294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 13894033 - 13893869
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||| |||||| | ||||||||||||||| ||  ||| |||| ||  ||| || |||| ||    
T  13894033 ctttcgcaccggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctggaaatccaa 13893934  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||| | | |||||| |||| ||||||||| || |||||||||||||||||||||    
T  13893933 cccggtattccccggacacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 13893869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 29128026 - 29127862
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||||||||||  |||  ||| || |||| || |||||||    
T  29128026 ctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaa 29127927  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||| ||  ||| |||||| |||| | ||||||| || |||||||||||||||||||||    
T  29127926 cccgatattccccagatacgtccttggaaggatctccttgccactggagcccaaacaacttggtt 29127862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 35316063 - 35315899
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| ||||||||  ||| |||||||||  ||||  | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  35316063 ctttcgcatcggtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 35315964  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    ||||||||||||||  || |||||| |||| ||||| ||| || |||||||||||||||||||||    
T  35315963 cccgatattctccgggtacgtccttggaaggagctctttgccactggagcccaaacaacttggtt 35315899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 54261333 - 54261167
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| |||| |||| || |||||||||| |||||  | ||||||||||||||||||| ||| |||| ||   ||  |||||||||    
T  54261333 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaa 54261234  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||| ||||| ||   || |||||| |||| ||||||||| || |||||||||||||||||||||||    
T  54261233 cccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaacttggttta 54261167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 29762155 - 29762320
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||| | |||||||||||||  ||||  |  |||||||||||||||||| |||  ||| ||  ||| | |||||| |    
T  29762155 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcgga 29762254  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||||||||| |||||||  ||||| |||| ||||||||| || |||||||||| |||||||||||    
T  29762255 cccgatattccccgaatacatccttggaaggagctccttgccactggagcccaagcaacttggttt 29762320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 404 - 564
Target Start/End: Complemental strand, 10040659 - 10040500
Alignment:
Q  404 cgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccg 503  Q
    ||||||||||||| | ||||||||| |||||||| | || |||||| | ||||||||||||||||||| ||| |||| ||  ||| | ||||||||||||    
T  10040659 cgcaccggtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc-ccctgagaatcgaacccg 10040561  T
Q  504 atattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||| |||  || |||||| |||| ||||||||| || |||||||||| ||||||||||    
T  10040560 atattccccgggtacgtccttagaaggagctccttgccactggagcccaagcaacttggtt 10040500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 25295067 - 25294903
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||| | ||||||| | ||||||||||||| |||||  |  |||||||||||||||||| |||  ||| ||| ||| | ||||| ||    
T  25295067 ctttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaaa 25294968  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||| ||| |||||| |||| ||||||||| || |||||||||| ||||||||||    
T  25294967 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 25294903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 45877561 - 45877397
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||| ||| | || |||||||||| |||||  | ||||||||||| ||||||| |||  ||| ||| ||| || |||||||    
T  45877561 ctttcgcaccggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaa 45877462  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| ||| ||| |||||| ||||  |||||||| || |||||||||||||||||||||    
T  45877461 cccggtattccccggatacgtccttggaaggggctccttgccactggagcccaaacaacttggtt 45877397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 51682955 - 51683118
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||| ||||||||| ||||||  | ||| ||||||||| |||||| | | ||||||||||||||||||||| |||| ||  ||| |||||||||||    
T  51682955 tttcgcactggtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaac 51683054  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    | | ||||| ||| ||| ||| || |||| ||||||| | || |||||||||||||||||||||    
T  51683055 ctggtattccccggatacgtctttggaaggagctcctcgccactggagcccaaacaacttggtt 51683118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 29136020 - 29135855
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||| |||||||||| | ||||||| | |||| |||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  29136020 ctttcgtaccggtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 29135921  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
     ||| ||||| ||| ||| |||||| |||||||||||||| || |||||||||| ||| |||||||    
T  29135920 tccggtattccccggatacgtccttggaagaagctccttgccactggagcccaagcaatttggttt 29135855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 33251769 - 33251604
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||  |||| ||| ||| ||||  ||||||||||||| |||||  | |||||||||||| |||||| |||||||| ||  | ||||||||||||    
T  33251769 ctttcgcactcgttttcgacccatcaaatgtggacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaa 33251670  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| ||||| || |||| |||||| |||| ||||| ||| ||  |||||||||||||||||||||    
T  33251669 cccggtattcccctaatacgtccttggaaggagctcattgccaccggagcccaaacaacttggttt 33251604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 41630512 - 41630676
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||| |||| |||||||| | ||||||| ||| ||||||||| |||||  | ||||||||||||||||||| ||| |||| ||  ||  |||||| |||    
T  41630512 ctttcacaccagtttccgaccaaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgttccccttgggaattgaa 41630611  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| |||| ||||  || |||| | |||| |||||||||||| |||||||||||||||||||||    
T  41630612 cccggtattttccggttacgtccatggaaggagctccttgtcactggagcccaaacaacttggtt 41630676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 400 - 567
Target Start/End: Complemental strand, 15320293 - 15320126
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || ||||||||| ||| ||||||||| |||||| | |||||||||||| |||||| ||| | || ||   ||  | |||||||    
T  15320293 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcgaa 15320194  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttac 567  Q
    |||| ||||| |||  || |||||| |||| ||||||||| || ||||| ||||||||||||||||||    
T  15320193 cccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggtttac 15320126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 400 - 561
Target Start/End: Complemental strand, 31072985 - 31072824
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||| | | ||||||| ||||||| |||||||| ||| | ||||||||||| ||||||  ||| |||| ||  ||| || |||||||    
T  31072985 ctttcgcaccggtttccaacctaccaaaggtggacgattaatctgggtcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaa 31072886  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    || | |||||||||  || ||||||  ||| ||||||||| || ||||||||||||||||||    
T  31072885 cctggtattctccgggtacgtccttgaaaggagctccttgccattggagcccaaacaacttg 31072824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 401 - 561
Target Start/End: Complemental strand, 6462518 - 6462358
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||||||||||| | |||| ||  |||| ||||||||| |||||  | ||||||||||||||||||| ||| |||| || |||| | |||||||||    
T  6462518 tttcgcaccggtttccaacccactaataatggtcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaac 6462419  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    ||| ||||| ||  ||| |||||| |||| ||||||||| || | |||||||| |||||||    
T  6462418 ccggtattccccagatacgtccttggaaggagctccttgccactagagcccaagcaacttg 6462358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 434 - 566
Target Start/End: Original strand, 42412808 - 42412940
Alignment:
Q  434 cgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagc 533  Q
    ||||||||| |||||  | ||||||||||| ||||| | ||| |||| ||  |||||||||||||||||| ||||| ||| ||| |||||| |||| |||    
T  42412808 cgactaatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttggaaggagc 42412907  T
Q  534 tccttgtcaatggagcccaaacaacttggttta 566  Q
    |||||| || |||||||||| ||||||||||||    
T  42412908 tccttgccattggagcccaagcaacttggttta 42412940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 400 - 502
Target Start/End: Original strand, 28572211 - 28572313
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||| | ||||||||||||  ||||| ||| |||| ||| ||| ||||||||||    
T  28572211 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccctgggaatcgaa 28572310  T
Q  500 ccc 502  Q
    |||    
T  28572311 ccc 28572313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 422 - 572
Target Start/End: Original strand, 32873571 - 32873720
Alignment:
Q  422 accaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtc 521  Q
    ||||||| ||| |||||||||||||||    ||||||||||| ||||||||||| |||| || ||||  ||||||||||| | ||||| |||  || |||    
T  32873571 accaaaggtgggcgactaatctggctcatacgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggtattc-ccgggtacgtc 32873669  T
Q  522 cttcgaagaagctccttgtcaatggagcccaaacaacttggtttacatttt 572  Q
    ||| |||  ||||||||| || ||||||||||||||||||||||| |||||    
T  32873670 cttggaatgagctccttgccactggagcccaaacaacttggtttaaatttt 32873720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 403 - 564
Target Start/End: Original strand, 26207804 - 26207965
Alignment:
Q  403 tcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaaccc 502  Q
    |||||||||||||||| |||| ||  |||| ||||||||| |||||  | |||||||||||| |||||| ||| |||| ||  ||  |||||||||||||    
T  26207804 tcgcaccggtttccgacccactaataatggccgactaatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaaccc 26207903  T
Q  503 gatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    | ||||| |||  ||  ||||| |||| ||||||||| || |||||||||| ||||||||||    
T  26207904 ggtattccccgggtacatccttggaaggagctccttgccactggagcccaagcaacttggtt 26207965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 402 - 514
Target Start/End: Complemental strand, 8362682 - 8362570
Alignment:
Q  402 ttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacc 501  Q
    |||||||||||||| ||||||| |||| |||||||||||| ||||||  | ||||||||||||| ||||| |||||||| ||| | | |||||| |||||    
T  8362682 ttcgcaccggtttcggatccactaaaggtggacgactaatttggctcatgcgtagaggcatgcggactggccaaacgttgtttccactgggaattgaacc 8362583  T
Q  502 cgatattctccga 514  Q
    || ||||| ||||    
T  8362582 cggtattccccga 8362570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 524
Target Start/End: Complemental strand, 47219251 - 47219127
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||| |||||  | ||||||||||||||||| | ||| |||| ||| ||  ||||||||||    
T  47219251 ctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaatcgaa 47219152  T
Q  500 cccgatattctccgaataagtcctt 524  Q
    || | ||||| ||| ||| ||||||    
T  47219151 cctggtattccccggatacgtcctt 47219127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 47749105 - 47749268
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| | ||||||| ||| ||||||||  |||||| | ||||||||||||||||||| |||  |||  || |||  |||||||||    
T  47749105 ctttcgcatcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaagagtt-gttcccctaggaatcgaa 47749203  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| | | ||| |||||| |||||||||| ||  || |||||||||||||| ||||||    
T  47749204 cccggtattccctggatacgtccttggaagaagctcattaccactggagcccaaacaatttggtt 47749268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 51060281 - 51060445
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||| | |||||||||||||  | ||  | ||||||||||||||||||  |||  ||| ||  ||| | ||||||||    
T  51060281 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaatcgaa 51060380  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||| ||| |||  ||||| |||| ||||  ||| || ||||| |||||||||||||||    
T  51060381 cccgatattccccggatagatccttggaaggagctatttgccactggagtccaaacaacttggtt 51060445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 401 - 537
Target Start/End: Complemental strand, 53649833 - 53649697
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    |||||||||||||||||||||| ||||| || |||||||||| |||||  | |||||| || ||||||||| |||  ||| ||  ||| | |||||||||    
T  53649833 tttcgcaccggtttccgatccatcaaaggtgaacgactaatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccctgagaatcgaac 53649734  T
Q  501 ccgatattctccgaataagtccttcgaagaagctcct 537  Q
    ||| ||||| ||||||| |||||| |||| |||||||    
T  53649733 ccggtattccccgaatacgtccttggaaggagctcct 53649697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 405 - 563
Target Start/End: Original strand, 35923628 - 35923786
Alignment:
Q  405 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccga 504  Q
    |||||||||| ||||||| ||||||||||||||||||  | |||| |  |||||||||||||||||| |||||||| ||  |||   |||||||||| |     
T  35923628 gcaccggttttcgatccatcaaagatggacgactaattcgactcgtgcttagaggcatgcgcactggccaaacgttgttccccctatgaatcgaacctgg 35923727  T
Q  505 tattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggt 563  Q
    ||||||||   || |||||| |||  ||||| ||| || | ||||||||||||||||||    
T  35923728 tattctccaggtacgtccttggaatgagctcattgccactagagcccaaacaacttggt 35923786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 400 - 566
Target Start/End: Complemental strand, 49543626 - 49543460
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||| ||| |||||||| |||| |||| ||| ||||||||  |||||| | |||||||||||| |||||  |||||||| ||  ||  | ||||||||    
T  49543626 ctttcgtaccagtttccgacccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcgaa 49543527  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
    |||||||||| | | ||| |||||| |||| ||||||||| || |  ||||||||||| ||||||||    
T  49543526 cccgatattcccgggatacgtccttggaaggagctccttgccactaaagcccaaacaaattggttta 49543460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 405 - 502
Target Start/End: Original strand, 50405608 - 50405705
Alignment:
Q  405 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaaccc 502  Q
    |||||||||||||| ||||||| | ||| ||||||||| | |||| | ||||||||||||||||||||||| |||| ||| |||  ||||||||||||    
T  50405608 gcaccggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtttcccctcggaatcgaaccc 50405705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 560
Target Start/End: Original strand, 26590266 - 26590426
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||||||||||||||| | |  ||| |||||| ||||| | |||||||||||| |||||  ||| |||| ||  ||| | ||||||||    
T  26590266 ctttcgcaccggtttccgatccaccaaatacgatcgattaatctagctcgtgtgtagaggcatgcacactgaccaagcgttgttccccctgagaatcgaa 26590365  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaactt 560  Q
    ||| ||||||| ||  || ||||||  ||||| || ||||||| ||||| ||||| |||||    
T  26590366 cccaatattcttcgggtacgtccttgaaagaaacttcttgtcactggagtccaaaaaactt 26590426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 560
Target Start/End: Original strand, 30767247 - 30767407
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||  |||||||| ||||||||| ||| ||||||||| |||||| | |||||||||||| |||||| |||  ||| ||  ||| || |||||||    
T  30767247 ctttcgcactagtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaa 30767346  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaactt 560  Q
    |||||||||| ||   ||  ||||| |||| | ||||||| || |||||||||| ||||||    
T  30767347 cccgatattccccaggtacatccttggaaggaactccttgccactggagcccaagcaactt 30767407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 55069679 - 55069843
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||| |||||||||||||| ||||||||| ||  ||| ||||| |||||| | ||||||||||| ||||||| |||||||| ||  |    |||||| ||    
T  55069679 cttttgcaccggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgttccctataggaatcaaa 55069778  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||  ||||| | ||||| ||||||  ||  ||||| |||||| |||||||||||||||||||||    
T  55069779 cccagtattccctgaatacgtccttgaaaagagctcattgtcactggagcccaaacaacttggtt 55069843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 49021203 - 49021274
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||  | |||||||||||||||||||    
T  49021203 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 49021274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 401 - 471
Target Start/End: Original strand, 3507534 - 3507604
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    |||||||||||||||||| ||||||||| ||  ||||||||| |||||| | |||||||||||||||||||    
T  3507534 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactgg 3507604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 7328950 - 7328786
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| ||| ||||||||| ||| ||||||||| |||||  | ||| ||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  7328950 ctttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaa 7328852  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||| ||||  |||  || |||||| |||| | ||||||| || | |||| ||| |||||||||||    
T  7328851 cccggtatttcccgggtacgtccttggaaggaactccttgccactagagcacaagcaacttggttt 7328786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 400 - 509
Target Start/End: Complemental strand, 23511674 - 23511565
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||| ||| ||| ||||| ||||||| ||||| | |||  | ||||||||||||||||||||||||||||  |  ||  | ||||||||    
T  23511674 ctttcgcaccggttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcactggtcaaacgttgctccccttgtgaatcgaa 23511575  T
Q  500 cccgatattc 509  Q
    ||||||||||    
T  23511574 cccgatattc 23511565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 400 - 480
Target Start/End: Original strand, 15084945 - 15085025
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| |||||   ||||||| |||| |||||| ||| ||||    
T  15084945 ctttcacaccggtttccgatccaccaaagatagacgactaatctagctcgtacgtagaggtatgcacactggccaaccgtt 15085025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 435 - 559
Target Start/End: Complemental strand, 49082896 - 49082772
Alignment:
Q  435 gactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagct 534  Q
    ||||||||||  ||| | ||||| |||||||||||||  || |||| || |||| ||||||||||| || ||||| ||| ||| |||||| |||| ||||    
T  49082896 gactaatctgattcgtgtgtagatgcatgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccggatacgtccttagaaggagct 49082797  T
Q  535 ccttgtcaatggagcccaaacaact 559  Q
    || || || ||||||||||||||||    
T  49082796 ccctgccactggagcccaaacaact 49082772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 43330732 - 43330807
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 475  Q
    |||||| ||||||||  || ||||||||| ||| ||||||||| |||||| | |||||||||||||||||||||||    
T  43330732 ctttcgtaccggtttttgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaa 43330807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 3136694 - 3136764
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 470  Q
    ||||||||||||||||||| | ||||||| ||||||||||||| | |||  | ||||||||||||||||||    
T  3136694 ctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactg 3136764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 400 - 574
Target Start/End: Complemental strand, 47471938 - 47471765
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| ||||||||| ||||||||||||  |||||  | ||||| ||||||||||| | ||| | ||  || ||| ||||||||||    
T  47471938 ctttcgcatcggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcactagccaagcatt-gttcccctgggaatcgaa 47471840  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttacattttat 574  Q
    |||| ||||| |    || |||||| |||| ||||| ||| || | |||||||| |||||||||||  |||||||    
T  47471839 cccggtattccctaggtacgtccttggaaggagctctttgccactagagcccaagcaacttggttttaattttat 47471765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 509
Target Start/End: Original strand, 7310703 - 7310812
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||||| ||||||||||||  ||||||||| |||||| | |||||||||||| ||| || |||  ||| ||  | | ||||||||||    
T  7310703 ctttcgcatcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcccactgggaatcgaa 7310802  T
Q  500 cccgatattc 509  Q
    |||| |||||    
T  7310803 cccggtattc 7310812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 26361967 - 26362129
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||| ||||||||||||| ||| ||||| ||  ||||||||| |||||| | |||||||||||| |||||  |||||||| ||  ||  ||||||| ||    
T  26361967 ctttcacaccggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccttgggaatcaaa 26362066  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    || |||||||  |||  | |||||| |||| ||||| |||||| ||||| ||||| || ||||||    
T  26362067 cctgatattcctcga--acgtccttggaaggagctcattgtcactggagtccaaagaatttggtt 26362129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 492 - 565
Target Start/End: Complemental strand, 43738459 - 43738387
Alignment:
Q  492 gaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||||||||||| ||||||||| ||| |||||| ||||||||| ||||||| ||||||| ||||||||| ||||    
T  43738459 gaatcgaacccggtattctccg-atacgtcctttgaagaagcttcttgtcactggagccaaaacaactttgttt 43738387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 461
Target Start/End: Complemental strand, 47164213 - 47164152
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggca 461  Q
    ||||| ||||||||||||||||||||||||||  ||||||||| |||||| | |||||||||    
T  47164213 ctttcacaccggtttccgatccaccaaagatgagcgactaatccggctcgtgcgtagaggca 47164152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 7650334 - 7650170
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||| | ||||||||| ||| ||||||||| |||||| | |||||| ||| || ||||| |||  ||| ||  ||| || |||||||    
T  7650334 ctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaa 7650235  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| |  | ||  |||||  ||| | ||||||| || |||| ||||||||||||||||    
T  7650234 cccggtattccctaagtacatccttgaaaggaactccttgccactggaacccaaacaacttggtt 7650170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 928707 - 928632
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 475  Q
    ||||||||||| ||| |||  |||||||| |||| |||||||| |||||| | |||| ||||||||||||||||||    
T  928707 ctttcgcaccgattttcgactcaccaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcactggtcaa 928632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 402 - 501
Target Start/End: Complemental strand, 4638259 - 4638160
Alignment:
Q  402 ttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacc 501  Q
    |||||| |||||||||| |||  |||| ||| | ||||||| |||||| | ||||||| ||||||||||||||| |||| |||  || ||||||||||||    
T  4638259 ttcgcatcggtttccgacccattaaaggtgggctactaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtttctcctgggaatcgaacc 4638160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 453 - 564
Target Start/End: Original strand, 11687162 - 11687273
Alignment:
Q  453 gtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagccca 552  Q
    ||||||||||||||||||| ||| | || ||  ||| | ||||| |||||| ||||||||   || |||||| |||| |||| |||| || |||||||||    
T  11687162 gtagaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtattctccaggtacgtccttggaaggagcttcttgccactggagccca 11687261  T
Q  553 aacaacttggtt 564  Q
    ||||||||||||    
T  11687262 aacaacttggtt 11687273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 503
Target Start/End: Complemental strand, 26043919 - 26043816
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||| |||||||| ||  |||||||| ||  ||||||||| |||||  | ||||||||||||||||||| |||  ||| || |||| ||||||||||    
T  26043919 ctttcgccccggtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcgaa 26043820  T
Q  500 cccg 503  Q
    ||||    
T  26043819 cccg 26043816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 460 - 567
Target Start/End: Original strand, 37092565 - 37092672
Alignment:
Q  460 catgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaact 559  Q
    |||||||||||| |||||||| ||  ||  || |||| || |||||||||  ||  || |||||| |||||||||||||| || |||||||||| |||||    
T  37092565 catgcgcactggccaaacgttgttccccttggaaatctaatccgatattccacgggtacgtccttggaagaagctccttgccactggagcccaagcaact 37092664  T
Q  560 tggtttac 567  Q
    ||||||||    
T  37092665 tggtttac 37092672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 434 - 565
Target Start/End: Complemental strand, 39849144 - 39849014
Alignment:
Q  434 cgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagc 533  Q
    ||||||||| |||||  | |||||||||||| |||||| ||| |||| ||  | | ||||||||||||||| |||| | || || |||||| |||| |||    
T  39849144 cgactaatccggctcatgcgtagaggcatgcacactggccaagcgttgttc-ctctgggaatcgaacccgaaattccctgagtacgtccttggaaggagc 39849046  T
Q  534 tccttgtcaatggagcccaaacaacttggttt 565  Q
    |||||| || |||||||||| | |||||||||    
T  39849045 tccttgccactggagcccaagcgacttggttt 39849014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 45450447 - 45450522
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 475  Q
    ||||||||||||||||| |  || ||||| |||||||||||||| |||   | |||||||||||||||||||||||    
T  45450447 ctttcgcaccggtttccaactcatcaaaggtggacgactaatctagcttatgcgtagaggcatgcgcactggtcaa 45450522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 422 - 564
Target Start/End: Complemental strand, 3755655 - 3755513
Alignment:
Q  422 accaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtc 521  Q
    ||||||| | ||||||||||| |||||  | |||||| ||||||||||||||||||||| ||   || ||||||||||  || ||||| ||| ||| |||    
T  3755655 accaaaggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatacgtc 3755556  T
Q  522 cttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||  ||  ||||| ||| || ||||| |||| ||||||||||    
T  3755555 cttgaaaagagctctttgccactggagtccaagcaacttggtt 3755513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 400 - 442
Target Start/End: Complemental strand, 19147068 - 19147026
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatc 442  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  19147068 ctttcgcaccggtttccgacccaccaaaggtggacgactaatc 19147026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 462 - 564
Target Start/End: Complemental strand, 50682522 - 50682420
Alignment:
Q  462 tgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttg 561  Q
    |||||||||| ||| |||| || ||||  | |||||||||| ||||| |||||||| ||| ||||||| |||| |||| || | |||| |||||||||||    
T  50682522 tgcgcactggccaagcgttgttctccctagaaatcgaaccctatattttccgaatacgtcattcgaaggagcttcttgccactagagctcaaacaacttg 50682423  T
Q  562 gtt 564  Q
    |||    
T  50682422 gtt 50682420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 509
Target Start/End: Original strand, 26923261 - 26923370
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || |||||||  |||||| | ||||| | |||| | ||| | |||||||||||| ||||||||| |||||||    |||||||    
T  26923261 ctttcgcaccggtttctgacccaccaataatggacaattaatccgactcgtgtgtatatgcatgcgcactgatcaaacgttgttttccctaaaaatcgaa 26923360  T
Q  500 cccgatattc 509  Q
     |||||||||    
T  26923361 tccgatattc 26923370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 509
Target Start/End: Complemental strand, 30045928 - 30045819
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||  |||| ||| ||| ||||| ||||||||||||| | |||| | |||||| |||||||||||| ||| |||| ||  |||  |||||||||    
T  30045928 ctttcgcactagtttacgacccatcaaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaa 30045829  T
Q  500 cccgatattc 509  Q
    |||| |||||    
T  30045828 cccggtattc 30045819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 449
Target Start/End: Original strand, 36043674 - 36043723
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcg 449  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| ||||||    
T  36043674 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcg 36043723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 424 - 480
Target Start/End: Complemental strand, 7648823 - 7648767
Alignment:
Q  424 caaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    ||||| ||| ||||||||| |||||| | ||||||| ||||||||||||||||||||    
T  7648823 caaaggtgggcgactaatccggctcgtgcgtagaggtatgcgcactggtcaaacgtt 7648767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 412 - 480
Target Start/End: Complemental strand, 8164648 - 8164580
Alignment:
Q  412 tttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    ||||||||||||||||| ||| ||||||||| | |||| | ||| ||||||||||||||| ||| ||||    
T  8164648 tttccgatccaccaaaggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgtt 8164580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 424 - 564
Target Start/End: Complemental strand, 10855466 - 10855327
Alignment:
Q  424 caaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtcct 523  Q
    ||||||||| ||||||||  || ||| | ||||||||||||| ||||| ||| |||| ||  ||| || |||| |||||| ||||  || | ||  ||||    
T  10855466 caaagatgg-cgactaattcggttcgtgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatttcccaagtacatcct 10855368  T
Q  524 tcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    | |||| ||||||||| || |||||||||||||||||||||    
T  10855367 tggaaggagctccttgccactggagcccaaacaacttggtt 10855327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 400 - 480
Target Start/End: Original strand, 24506648 - 24506728
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    |||| |||||||||||||| ||||||| | ||  ||||||||||| |||  | ||||||||||| ||||||||||| ||||    
T  24506648 cttttgcaccggtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcactggtcaagcgtt 24506728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 405 - 509
Target Start/End: Complemental strand, 33689053 - 33688949
Alignment:
Q  405 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccga 504  Q
    |||||||||||| | ||||||| | |||| |||||| |||||||  | ||||||||||||||||||| |||  ||||||  ||   ||||| ||||||||    
T  33689053 gcaccggtttccaacccaccaatggtggatgactaaactggctcatgcgtagaggcatgcgcactggccaagtgttattccccttaggaattgaacccga 33688954  T
Q  505 tattc 509  Q
    |||||    
T  33688953 tattc 33688949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 50753341 - 50753405
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgc 464  Q
    |||| |||||||||||||| ||||||| |||| |||||||||| | |||| | ||||||||||||    
T  50753341 cttttgcaccggtttccgacccaccaatgatgaacgactaatccgactcgtgcgtagaggcatgc 50753405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 10043167 - 10043100
Alignment:
Q  490 gggaatcgaacccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaa 557  Q
    |||||||||||||||||||| ||| ||| ||||||  ||| ||||| ||| || ||||||||||||||    
T  10043167 gggaatcgaacccgatattccccggatacgtccttgaaaggagctcattgccagtggagcccaaacaa 10043100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 400 - 459
Target Start/End: Complemental strand, 19873479 - 19873420
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagagg 459  Q
    |||| ||||| |||||||| |||| |||||||||||||||||| |||||| | |||||||    
T  19873479 cttttgcaccagtttccgacccacaaaagatggacgactaatccggctcgtgcgtagagg 19873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 21325171 - 21325120
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcg 451  Q
    ||||||||||||||||||| ||| ||||||||| ||| ||||| ||||||||    
T  21325171 ctttcgcaccggtttccgacccatcaaagatgggcgattaatccggctcgcg 21325120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 54237555 - 54237485
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 470  Q
    ||||||||||||||||||| |||| || | ||||||||| ||| |||||  | |||||| |||||||||||    
T  54237555 ctttcgcaccggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactg 54237485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 10043789 - 10043720
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 469  Q
    ||||||||||||||||||| ||||||| | ||  ||| ||||||| |||| | ||||||||||| |||||    
T  10043789 ctttcgcaccggtttccgacccaccaatggtgagcgattaatctgcctcgtgcgtagaggcatgtgcact 10043720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 401 - 530
Target Start/End: Original strand, 34662320 - 34662449
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    ||||||| |||||||| |||||| |||| ||||||||||||  |||||  |  ||||| |||||| ||||  |||||||||||   || |  ||||||||    
T  34662320 tttcgcatcggtttccaatccactaaaggtggacgactaattcggctcatgcatagagacatgcgtactgaccaaacgttattcctcctgaaaatcgaac 34662419  T
Q  501 ccgatattctccgaataagtccttcgaaga 530  Q
    ||||||||| || | || |||||| |||||    
T  34662420 ccgatattccccaagtacgtccttggaaga 34662449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 400 - 513
Target Start/End: Original strand, 35998571 - 35998683
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || |||| |||| ||||||| |||||   |||| | ||||||||||| |||||| |||| ||||  ||||||  | |||| ||    
T  35998571 ctttcgcaccggtttctgacccactaaaggtggacgattaatccaactcgtgcgtagaggcatgtgcactgatcaagcgtt-gtttccctcgaaatcaaa 35998669  T
Q  500 cccgatattctccg 513  Q
    |||| |||||||||    
T  35998670 cccggtattctccg 35998683  T

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Target: scaffold0006 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 68621 - 68460
Alignment:
Q  403 tcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaaccc 502  Q
    |||||||||||| ||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||    ||| |||| ||  ||| |||||||||||||    
T  68621 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacc---caagcgttgttccccctgggaatcgaaccc 68525  T
Q  503 gatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttac 567  Q
    ||||||  |||  || |||||| |||| ||||||||| || | ||||||||||||||||||||||    
T  68524 gatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtttac 68460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 41154 - 40990
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||| ||||||||||||  |||||||||||| ||||||||| |||||| | |||||||||||| |||||  |||  ||| ||  ||  | ||||||||    
T  41154 ctttcgaaccggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaa 41055  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||||||| | || || |||| | |||| ||||||||| || |||||||||||||||||||||    
T  41054 cccgatattccctgagtacgtccatggaaggagctccttgccactggagcccaaacaacttggtt 40990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 12683 - 12521
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||  ||||| ||||| ||| ||||||||| | |||  | ||||||||||||||||||||||| |||  | |||||  |||||||||    
T  12683 ctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgt--tgttccctaggaatcgaa 12586  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||   ||| || |||||| |||| ||||||||| || | |||||||||||||||||||    
T  12585 cccggtatttctcgagtacgtccttggaagtagctccttgccactagagcccaaacaacttggtt 12521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 53; Significance: 8e-21; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 410 - 566
Target Start/End: Complemental strand, 9945 - 9789
Alignment:
Q  410 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 509  Q
    |||||| || ||||||||| ||||||||||||| |||||| | ||||||||||||||||||| ||| |||| ||  ||| || ||||||| ||| |||||    
T  9945 ggtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattc 9846  T
Q  510 tccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggttta 566  Q
      |  |||  ||||| |||| |||||||||||| ||||| | |||||||||||||||    
T  9845 ctcagatacatccttggaaggagctccttgtcactggagtcaaaacaacttggttta 9789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 53; Significance: 8e-21; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 680 - 516
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||  |||||||||||||||    |||||||||||| ||||| ||||  ||| ||  ||| | ||||||||    
T  680 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaagtgttgttccccctgcgaatcgaa 581  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| ||||| |||  || |||||| |||| ||||||||| || | |||||||| ||||||||||    
T  580 cccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaagcaacttggtt 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 400 - 550
Target Start/End: Complemental strand, 319532 - 319382
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||  ||||||||| |||||||||||||  ||||  |  |||||| ||||||||||| ||| |||| ||  |||  | |||| ||    
T  319532 ctttcgcaccggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgttccccctagaaatcaaa 319433  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcc 550  Q
    |||| ||||| ||| ||| |||||| |||| ||||||||| || |||||||    
T  319432 cccggtattccccggatacgtccttggaaggagctccttgccactggagcc 319382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 5e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 400 - 509
Target Start/End: Original strand, 42831 - 42940
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||||||||||  ||| | || || ||||  |||||||||    
T  42831 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaagcattgttctccctaggaatcgaa 42930  T
Q  500 cccgatattc 509  Q
    ||||||||||    
T  42931 cccgatattc 42940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 401 - 448
Target Start/End: Complemental strand, 9551 - 9504
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctc 448  Q
    ||||||||||||||| || ||||||||| |||||||||||| ||||||    
T  9551 tttcgcaccggtttctgacccaccaaaggtggacgactaatttggctc 9504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 8700 - 8873
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||| |||||||| ||||||||| |||||||||||||  ||||  | ||||||||| ||||||||| ||| |||| ||  ||| ||||||||||    
T  8700 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaa 8799  T
Q  500 cccgatatt-ctccga--------ataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |||| |||| ||| ||        ||| |||||| |||| ||||||||| || |||||||||||||||||||||    
T  8800 cccggtattcctctgatacgtctgatacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 8873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 509
Target Start/End: Complemental strand, 6965 - 6856
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||||||||||||| ||||||||| ||  ||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  6965 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 6866  T
Q  500 cccgatattc 509  Q
    |||| |||||    
T  6865 cccggtattc 6856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 25784 - 25947
Alignment:
Q  401 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 500  Q
    ||||||||||||||| || |||  |||| |||  ||||||||||| || || |||||| |||||||||||| ||| |||| || ||||  ||||||||||    
T  25784 tttcgcaccggtttctgacccagtaaaggtgggtgactaatctggttcacgcgtagagtcatgcgcactggccaagcgttgttctccctaggaatcgaac 25883  T
Q  501 ccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtt 564  Q
    |   ||||| |||| || || ||| |||| ||||| |||  | |||||||||||||||||||||    
T  25884 cttgtattccccgagtacgtacttggaaggagctctttgctactggagcccaaacaacttggtt 25947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 155710 - 155809
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||| |||||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||| | ||| |||| ||  ||| ||||||||||    
T  155710 ctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttccccctgggaatcgaa 155809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 434 - 564
Target Start/End: Original strand, 271107 - 271237
Alignment:
Q  434 cgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagc 533  Q
    ||||||| | |||||| | |||||| |||||||||||  ||| |||| ||  ||| ||||||||||||||||||||||||  || |||||| |||| |||    
T  271107 cgactaacccggctcgtgcgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagc 271206  T
Q  534 tccttgtcaatggagcccaaacaacttggtt 564  Q
    |||||| ||   |||||||| ||||||||||    
T  271207 tccttgccaccagagcccaagcaacttggtt 271237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 219479 - 219402
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 477  Q
    |||| |||||||||| ||||||| ||||| |||||||||||||  | ||| | ||||||||||||||||||| |||||    
T  219479 cttttgcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaaac 219402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 250024 - 250101
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 477  Q
    ||||||||||| ||||||| |||||||||  |  ||||||||| |||||| | ||||||||||||||||||| |||||    
T  250024 ctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaaac 250101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 434 - 564
Target Start/End: Original strand, 249338 - 249473
Alignment:
Q  434 cgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaagaagc 533  Q
    ||||||||| | |||| | ||||||| ||| ||||||||||| ||||||| |||| | |||||||||| | ||||| || |||| |||||| |||| |||    
T  249338 cgactaatccgactcgtgcgtagaggtatgtgcactggtcaagcgttattctccctgagaatcgaacctggtattccccaaatacgtccttagaaggagc 249437  T
Q  534 ---tccttgtca--atggagcccaaacaacttggtt 564  Q
       |||||| ||   |||||||||||||||||||||    
T  249438 tgatccttgccactctggagcccaaacaacttggtt 249473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 40; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 1613 - 1684
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    ||||||||||||||| ||| ||||||||| ||| |||||||| ||||||  | |||||||||||||||||||    
T  1613 ctttcgcaccggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactgg 1684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 25195 - 25151
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctg 444  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||    
T  25195 ctttcgcaccggtttccgatccaccaaaggtggacgattaatctg 25151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 400 - 558
Target Start/End: Original strand, 94979 - 95136
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaa-gatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcga 498  Q
    |||| |||||| ||||||| |||||||| | ||| ||||||||| |||||  | ||| |||||||||||||||||||||||| |||  ||  | ||||||    
T  94979 cttttgcaccgatttccgacccaccaaatggtgggcgactaatccggctcatgcgtaaaggcatgcgcactggtcaaacgttgttt--cctagaaatcga 95076  T
Q  499 acccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaac 558  Q
    ||| | ||||| ||| |||  | ||| |||| ||||||||| || |||||||||| ||||    
T  95077 acctggtattccccggatactttcttggaaggagctccttgccattggagcccaagcaac 95136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 7834 - 7905
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 471  Q
    |||||| |||||||||||||||||||||| ||| |||||||||  |||   | |||||||||||||||||||    
T  7834 ctttcgtaccggtttccgatccaccaaaggtgggcgactaatccagctaatgcgtagaggcatgcgcactgg 7905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 400 - 567
Target Start/End: Complemental strand, 12780 - 12613
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||||||||||| || ||| ||||| ||| ||||||||| || ||| | |||||||||||| |||||| ||| |||| ||   ||   ||||||||    
T  12780 ctttcgcaccggtttctgacccatcaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctctgaatcgaa 12681  T
Q  500 cccgatattctccgaataagtccttcgaagaagctccttgtcaatggagcccaaacaacttggtttac 567  Q
    |||| ||||| |||   | |||||| |||| |||| |||| || | ||| |||| |||||||||||||    
T  12680 cccggtattccccgggcacgtccttggaaggagcttcttgccactagagtccaagcaacttggtttac 12613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 400 - 538
Target Start/End: Complemental strand, 16989 - 16851
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    |||||||| |||||||| | ||||||||| ||  |||||||||||||||| | |||||| ||| |||||||  ||| |||| ||| ||| | |||| |||    
T  16989 ctttcgcatcggtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgaccaagcgttgtttcccctgagaattgaa 16890  T
Q  500 cccgatattctccgaataagtccttcgaagaagctcctt 538  Q
    ||| |||||| | ||||   ||||| |||| ||||||||    
T  16889 cccaatattccctgaatgcatccttggaaggagctcctt 16851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 409 - 506
Target Start/End: Complemental strand, 17491 - 17394
Alignment:
Q  409 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgata 506  Q
    |||||||||| ||| ||| | ||| ||||||||| |||||| | ||||| ||||||||||||||||| | || ||| ||| | |||||||| ||||||    
T  17491 cggtttccgacccatcaatggtgggcgactaatccggctcgtgtgtagaagcatgcgcactggtcaagcattttttcccctgagaatcgaatccgata 17394  T

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Target: scaffold0045 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 400 - 480
Target Start/End: Original strand, 58032 - 58112
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 480  Q
    ||||||||||||| ||||||||||||||||| | |||||||||   |||  | ||||||| || | |||||||||||||||    
T  58032 ctttcgcaccggtatccgatccaccaaagataggcgactaatccaactcatgcgtagaggtatacacactggtcaaacgtt 58112  T

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Target: scaffold0086 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 400 - 502
Target Start/End: Complemental strand, 26293 - 26191
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 499  Q
    ||||||||| |||||||||  || |||   ||||||||||||| |||||| | |||||||||||| |||||| ||| |||| ||  ||| || |||||||    
T  26293 ctttcgcactggtttccgactcatcaattgtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaa 26194  T
Q  500 ccc 502  Q
    |||    
T  26193 ccc 26191  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 519 - 565
Target Start/End: Complemental strand, 51733 - 51687
Alignment:
Q  519 gtccttcgaagaagctccttgtcaatggagcccaaacaacttggttt 565  Q
    |||||| ||||||||||||||||| |||| |||||||||||| ||||    
T  51733 gtccttggaagaagctccttgtcagtggatcccaaacaacttagttt 51687  T

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Target: scaffold0079 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 400 - 441
Target Start/End: Complemental strand, 8273 - 8232
Alignment:
Q  400 ctttcgcaccggtttccgatccaccaaagatggacgactaat 441  Q
    ||||||||||||||||||| | ||||||| ||||||||||||    
T  8273 ctttcgcaccggtttccgacctaccaaaggtggacgactaat 8232  T

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