View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1320A-Insertion-18 (Length: 425)

Name: NF1320A-Insertion-18
Description: NF1320A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1320A-Insertion-18
NF1320A-Insertion-18
[»] chr8 (1 HSPs)
chr8 (7-425)||(11402536-11402954)
[»] chr4 (4 HSPs)
chr4 (5-276)||(24146978-24147261)
chr4 (5-276)||(27729984-27730276)
chr4 (5-276)||(45966246-45966538)
chr4 (289-395)||(45966497-45966603)
[»] chr5 (5 HSPs)
chr5 (5-276)||(35841959-35842251)
chr5 (112-276)||(12528771-12528936)
chr5 (5-110)||(12528958-12529063)
chr5 (112-278)||(12643795-12643962)
chr5 (296-346)||(12643967-12644017)
[»] chr2 (5 HSPs)
chr2 (5-276)||(42912884-42913176)
chr2 (5-106)||(42300832-42300933)
chr2 (112-187)||(42300959-42301034)
chr2 (289-395)||(42301083-42301189)
chr2 (289-395)||(42912819-42912925)
[»] chr1 (2 HSPs)
chr1 (5-276)||(29282025-29282317)
chr1 (289-395)||(29281960-29282066)
[»] chr6 (2 HSPs)
chr6 (112-276)||(29304106-29304271)
chr6 (5-106)||(29303979-29304080)


Alignment Details
Target: chr8 (Bit Score: 399; Significance: 0; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 7 - 425
Target Start/End: Complemental strand, 11402954 - 11402536
Alignment:
Q  7 aatttcaacaatggaggaagaaaaaactttagaggtagaggttgaggaacttttagaggaagaggatgtggaaacttcgatcaatggagagacaataatt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11402954 aatttcaacaatggaggaagaaaaaactttagaggtagaggttgaggaacttttagaggaagaggacgtggaaacttcgatcaatggagagacaataatt 11402855  T
Q  107 tcaagaggaagaggtggaaacaattttggttctaccaaccgtggcagagaaagaggttcttacaaacaagagagaccaaattacagttgttttcaccgtt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11402854 tcaagaggaagaggtggaaacaattttggttctaccaaccgtggcagagaaagaggttcttacaaacaagagagaccaaattacagttgttttcaccgtt 11402755  T
Q  207 gaaattttaggcacaaagcagccgattgcaaatacaacatcaggcaaacgtggcagaaaattcatatcaaaacactgatgagtcttgtgaaagtgtattg 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11402754 gaaattttaggcacaaagcagccgattgcaaatacaacatcaggcaaacgtggcagaaaattcatatcaaaacactaatgagtcttgtgaaagtgtattg 11402655  T
Q  307 cttgctaaaattaaaccatatggattttcataagactcacaattgttttgatctaaattttctgcaatctgtgcatgatgtttatatcttgaatcgtctg 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||    
T  11402654 cttgctaaaattaaaccatatggattttcataagactcacaattgttttgatataaattttttgcaatctgtgcatgatgtttatatcttcaatcgtctg 11402555  T
Q  407 ctttgcgctcaaacttttc 425  Q
    |||||||||||||||||||    
T  11402554 ctttgcgctcaaacttttc 11402536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 276
Target Start/End: Original strand, 24146978 - 24147261
Alignment:
Q  5 acaatttcaacaatggaggaagaaaaaactttagaggtagaggttgaggaacttttagaggaagaggatgtggaaacttcgatcaatggagagacaataa 104  Q
    |||||||||||| ||||  ||||  ||| || |||| || |||| ||||||| ||||||||||||||| |||| |||||| | |||||||||||||| ||    
T  24146978 acaatttcaacattggattaagaggaaatttcagagttaaaggtcgaggaacctttagaggaagaggacgtggcaacttcaaccaatggagagacaacaa 24147077  T
Q  105 tttcaag-----------aggaagaggtggaaacaattttggttctaccaaccgtggcagagaaagaggttcttacaaacaagagagaccaaattacagt 193  Q
    ||||||            |||||||||||||||||||||||| || | |||||||||||||| |||||||| |||||| ||||||||   |||| |  ||    
T  24147078 tttcaatccatcccatcaaggaagaggtggaaacaattttggctccaacaaccgtggcagaggaagaggttattacaaccaagagaggaaaaataatggt 24147177  T
Q  194 tgttttcaccgttgaaattttaggcacaaagcagccgattgcaaatac-aacatcaggcaaacgtggcagaaaattcatatcaa 276  Q
    || ||| |  || |||| |  |||||||||| ||| ||||| | |||| ||||| |||||||| ||||||| ||||||||||||    
T  24147178 tgctttaattgtggaaagtacaggcacaaagaagctgattgtagatacaaacataaggcaaacatggcagagaattcatatcaa 24147261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 5 - 276
Target Start/End: Complemental strand, 27730276 - 27729984
Alignment:
Q  5 acaatttcaacaatggaggaagaaaaaactttagaggtagaggttgaggaacttttagaggaagaggatgtggaaacttcgatcaatggagagacaataa 104  Q
    |||||||||||||||||||||||  ||| || ||||| |||||| ||||||  ||||||||||||||| |||| |||||| | |||||||||||||| ||    
T  27730276 acaatttcaacaatggaggaagaggaaatttcagaggaagaggtcgaggaagctttagaggaagaggacgtggcaacttcaaccaatggagagacaacaa 27730177  T
Q  105 tttcaaga--------------------ggaagaggtggaaacaattttggttctaccaaccgtggcagagaaagaggttcttacaaacaagagagacca 184  Q
    || ||| |                    |||| ||||||||||||||||||||| |  ||||||||||||| |||||||| |||||| ||||||||| ||    
T  27730176 ttacaacaatttcaatccatcccatcaaggaaaaggtggaaacaattttggttccaataaccgtggcagaggaagaggttattacaaccaagagagaaca 27730077  T
Q  185 aattacagttgttttcaccgttgaaattttaggcacaaagcagccgattgcaaata-caacatcaggcaaacgtggcagaaaattcatatcaa 276  Q
    ||| |  |||||||| |  || |||| | | ||||||||||||| || |||| |||  ||||||| |||||  ||||||| ||||||||||||    
T  27730076 aataatggttgttttaattgtggaaagtatgggcacaaagcagctgactgcagatataaacatcaagcaaatatggcagagaattcatatcaa 27729984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 276
Target Start/End: Original strand, 45966246 - 45966538
Alignment:
Q  5 acaatttcaacaatggaggaagaaaaaactttagaggtagaggttgaggaacttttagaggaagaggatgtggaaacttcgatcaatggagagacaataa 104  Q
    |||||||||||||||||||||||  ||| || ||||| |||||| ||||||  ||||||||||||||| |||| |||||| | |||||||||||||| ||    
T  45966246 acaatttcaacaatggaggaagaggaaatttcagaggaagaggtcgaggaagctttagaggaagaggacgtggcaacttcaaccaatggagagacaacaa 45966345  T
Q  105 tttcaa--------------------gaggaagaggtggaaacaattttggttctaccaaccgtggcagagaaagaggttcttacaaacaagagagacca 184  Q
    || |||                     ||||| |||||||||||| |||||||| |  ||||||||||||| |||||||| |||||| ||||||||| ||    
T  45966346 ttacaacaatttcaatccatcccatcaaggaaaaggtggaaacaactttggttccaataaccgtggcagaggaagaggttattacaaccaagagagaaca 45966445  T
Q  185 aattacagttgttttcaccgttgaaattttaggcacaaagcagccgattgcaaata-caacatcaggcaaacgtggcagaaaattcatatcaa 276  Q
    ||| |  |||||||| |  || |||| | | ||||||||||||| || |||| |||  ||||||| |||||  ||||||| ||||||||||||    
T  45966446 aataatggttgttttaattgtggaaagtatgggcacaaagcagctgactgcagatataaacatcaagcaaatatggcagagaattcatatcaa 45966538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 395
Target Start/End: Complemental strand, 45966603 - 45966497
Alignment:
Q  289 tcttgtgaaagtgtattgcttgctaaaattaaaccatatggattttcataagactcacaattgttttgatctaaattttctgcaatctgtgcatgatgtt 388  Q
    |||| ||||||||||||||||||||||| ||||| || | |||||| | ||||||||| |   | ||||| | |||| ||||| || | ||| |||||||    
T  45966603 tcttctgaaagtgtattgcttgctaaaaataaactatgttgattttgagaagactcaccaaaatgttgatatgaattctctgccatatttgcttgatgtt 45966504  T
Q  389 tatatct 395  Q
    |||||||    
T  45966503 tatatct 45966497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 5e-23; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 5 - 276
Target Start/End: Original strand, 35841959 - 35842251
Alignment:
Q  5 acaatttcaacaatggaggaagaaaaaactttagaggtagaggttgaggaacttttagaggaagaggatgtggaaacttcgatcaatggagagacaataa 104  Q
    |||||||||||||||||||||||  ||| || ||||| |||||| ||||||  ||||||||||||||| |||| |||||| | |||||||||||||| ||    
T  35841959 acaatttcaacaatggaggaagaggaaatttcagaggaagaggtcgaggaagctttagaggaagaggacgtggcaacttcaaccaatggagagacaacaa 35842058  T
Q  105 tttcaaga--------------------ggaagaggtggaaacaattttggttctaccaaccgtggcagagaaagaggttcttacaaacaagagagacca 184  Q
    || ||| |                    |||| ||||||||||||||||||||| |  ||||||||||||| |||||||| |||||| ||||||||| ||    
T  35842059 ttacaacaatttcaatccatcccatcaaggaaaaggtggaaacaattttggttccaataaccgtggcagaggaagaggttgttacaaccaagagagaaca 35842158  T
Q  185 aattacagttgttttcaccgttgaaattttaggcacaaagcagccgattgcaaata-caacatcaggcaaacgtggcagaaaattcatatcaa 276  Q
    ||| |  |||||||| |  || |||| | | ||||||||||||| || |||| |||  ||||||| |||||  ||||||| ||||||||||||    
T  35842159 aataatggttgttttaattgtggaaagtatgggcacaaagcagctgactgcagatataaacatcaagcaaatatggcagagaattcatatcaa 35842251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 112 - 276
Target Start/End: Complemental strand, 12528936 - 12528771
Alignment:
Q  112 aggaagaggtggaaacaattttggttctaccaaccgtggcagagaaagaggttcttacaaacaagagagaccaaattacagttgttttcaccgttgaaat 211  Q
    ||||| ||||||||||||||||||||| |  ||||||||||||| |||||||| |||||| ||||||||| ||||| |  |||||||| |  || ||||     
T  12528936 aggaaaaggtggaaacaattttggttccaataaccgtggcagaggaagaggttattacaaccaagagagaacaaataatggttgttttaattgtggaaag 12528837  T
Q  212 tttaggcacaaagcagccgattgcaaata-caacatcaggcaaacgtggcagaaaattcatatcaa 276  Q
    | | ||||||||||||| || |||| |||  ||||||| |||||  ||||||| ||||||||||||    
T  12528836 tatgggcacaaagcagctgactgcagatataaacatcaagcaaatatggcagagaattcatatcaa 12528771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 12529063 - 12528958
Alignment:
Q  5 acaatttcaacaatggaggaagaaaaaactttagaggtagaggttgaggaacttttagaggaagaggatgtggaaacttcgatcaatggagagacaataa 104  Q
    |||||||||||||||||||||||  ||  || ||||| |||||| ||||||  ||||||||||||||| |||| |||||| | |||||||||||||| ||    
T  12529063 acaatttcaacaatggaggaagaggaagtttcagaggaagaggtcgaggaagctttagaggaagaggacgtggcaacttcaaccaatggagagacaacaa 12528964  T
Q  105 tttcaa 110  Q
    || |||    
T  12528963 ttacaa 12528958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 112 - 278
Target Start/End: Original strand, 12643795 - 12643962
Alignment:
Q  112 aggaagaggtggaaacaattttggttctaccaaccgtggcagagaaagaggttcttacaaacaagagagaccaaattacagttgttttcaccgttgaaat 211  Q
    ||||||||||||| |||||||| ||| |||||| | || || || || ||| | |||||| ||||||||| ||||||| |||||||| |||  |  |||     
T  12643795 aggaagaggtggagacaattttagttataccaatcatgacaaaggaaaaggatattacaaccaagagagaacaaattatagttgtttccactatgaaaag 12643894  T
Q  212 tttaggcacaaagcagccgattgcaaatac-aacatcaggcaaacgtggcagaaaattcatatcaaaa 278  Q
    ||| |||||||| |||| ||||||| |||| ||||||  | |||| || |||||||||||||||||||    
T  12643895 tttgggcacaaaacagctgattgcagatacaaacatcgagaaaacatgccagaaaattcatatcaaaa 12643962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 12644017 - 12643967
Alignment:
Q  296 aaagtgtattgcttgctaaaattaaaccatatggattttcataagactcac 346  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  12644017 aaagtgtattgcttgctaaaaataaactatatggaatttcataagactcac 12643967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 5 - 276
Target Start/End: Complemental strand, 42913176 - 42912884
Alignment:
Q  5 acaatttcaacaatggaggaagaaaaaactttagaggtagaggttgaggaacttttagaggaagaggatgtggaaacttcgatcaatggagagacaataa 104  Q
    |||||||||||||||||||||||  ||| || ||||| |||||| ||||||  ||||||||||||||| |||| |||||| | |||||||||||||| ||    
T  42913176 acaatttcaacaatggaggaagaggaaatttcagaggaagaggtcgaggaagctttagaggaagaggacgtggcaacttcaaccaatggagagacaacaa 42913077  T
Q  105 tttcaaga--------------------ggaagaggtggaaacaattttggttctaccaaccgtggcagagaaagaggttcttacaaacaagagagacca 184  Q
    || ||| |                    |||| ||||||||||||||||||||| |  ||||||||||||| |||||||| |||||| ||||||||| ||    
T  42913076 ttacaacaatttcaatccatcccatcaaggaaaaggtggaaacaattttggttccaataaccgtggcagaggaagaggttattacaaccaagagagaaca 42912977  T
Q  185 aattacagttgttttcaccgttgaaattttaggcacaaagcagccgattgcaaata-caacatcaggcaaacgtggcagaaaattcatatcaa 276  Q
    ||| |  |||||||| |  || |||| | | ||||||||||||| || |||| |||  ||||||| |||||  ||||||| ||||||||||||    
T  42912976 aataatggttgttttaattgtggaaagtatgggcacaaagcagctgactgcagatataaacatcaagcaaatatggcagagaattcatatcaa 42912884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 42300832 - 42300933
Alignment:
Q  5 acaatttcaacaatggaggaagaaaaaactttagaggtagaggttgaggaacttttagaggaagaggatgtggaaacttcgatcaatggagagacaataa 104  Q
    |||||||||||||||||||||||  ||| || ||||| |||||| ||||||  ||||||||||||||| |||| |||||| | |||||||||||||| ||    
T  42300832 acaatttcaacaatggaggaagaggaaatttcagaggaagaggtcgaggaagctttagaggaagaggacgtggcaacttcaaccaatggagagacaacaa 42300931  T
Q  105 tt 106  Q
    ||    
T  42300932 tt 42300933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 112 - 187
Target Start/End: Original strand, 42300959 - 42301034
Alignment:
Q  112 aggaagaggtggaaacaattttggttctaccaaccgtggcagagaaagaggttcttacaaacaagagagaccaaat 187  Q
    ||||||||||||||||||||||||||| |  | ||||||||||| |||||||| |||||| ||||||||| |||||    
T  42300959 aggaagaggtggaaacaattttggttccaatagccgtggcagaggaagaggttattacaaccaagagagaacaaat 42301034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 395
Target Start/End: Complemental strand, 42301189 - 42301083
Alignment:
Q  289 tcttgtgaaagtgtattgcttgctaaaattaaaccatatggattttcataagactcacaattgttttgatctaaattttctgcaatctgtgcatgatgtt 388  Q
    |||| ||||||||||||||||||||||| ||||| || | |||||| | ||||||||| |   | ||||| | |||| ||||| || | ||| |||||||    
T  42301189 tcttctgaaagtgtattgcttgctaaaaataaactatgttgattttgagaagactcaccaaaatgttgatatgaattctctgccatatttgcctgatgtt 42301090  T
Q  389 tatatct 395  Q
    |||||||    
T  42301089 tatatct 42301083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 395
Target Start/End: Original strand, 42912819 - 42912925
Alignment:
Q  289 tcttgtgaaagtgtattgcttgctaaaattaaaccatatggattttcataagactcacaattgttttgatctaaattttctgcaatctgtgcatgatgtt 388  Q
    |||| ||||||||||||||||||||||| ||||| || | |||||| | ||||||||| |   | ||||| | |||| ||||| || | ||| |||||||    
T  42912819 tcttctgaaagtgtattgcttgctaaaaataaactatgttgattttgagaagactcaccaaaatgttgatatgaattctctgccatatttgcttgatgtt 42912918  T
Q  389 tatatct 395  Q
    |||||||    
T  42912919 tatatct 42912925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 5 - 276
Target Start/End: Complemental strand, 29282317 - 29282025
Alignment:
Q  5 acaatttcaacaatggaggaagaaaaaactttagaggtagaggttgaggaacttttagaggaagaggatgtggaaacttcgatcaatggagagacaataa 104  Q
    |||||||||||||||||||||||  ||| || ||||| |||||| ||||||  ||||||||||||||| |||| |||||| | |||||||||||||| ||    
T  29282317 acaatttcaacaatggaggaagaggaaatttcagaggaagaggtcgaggaagctttagaggaagaggacgtggcaacttcaaccaatggagagacaacaa 29282218  T
Q  105 tttcaaga--------------------ggaagaggtggaaacaattttggttctaccaaccgtggcagagaaagaggttcttacaaacaagagagacca 184  Q
    || ||| |                    |||| ||||||||||||||||||||| |  ||||||||||||| |||||||| |||||| ||||||||| ||    
T  29282217 ttacaacaatttcaatccatcccatcaaggaaaaggtggaaacaattttggttccaataaccgtggcagaggaagaggttattacaaccaagagagaaca 29282118  T
Q  185 aattacagttgttttcaccgttgaaattttaggcacaaagcagccgattgcaaata-caacatcaggcaaacgtggcagaaaattcatatcaa 276  Q
    ||| |  |||||||| |  || |||| | | ||||||||||||| || |||| |||  ||||||| |||||  ||||||| ||||||||||||    
T  29282117 aataatggttgttttaattgtggaaagtatgggcacaaagcagctgactgcagatataaacatcaagcaaatatggcagagaattcatatcaa 29282025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 395
Target Start/End: Original strand, 29281960 - 29282066
Alignment:
Q  289 tcttgtgaaagtgtattgcttgctaaaattaaaccatatggattttcataagactcacaattgttttgatctaaattttctgcaatctgtgcatgatgtt 388  Q
    |||| ||||||||||||||||||||||| ||||| || | |||||| | ||||||||| |   | ||||| | |||| ||||| || | ||| |||||||    
T  29281960 tcttctgaaagtgtattgcttgctaaaaataaactatgttgattttgagaagactcaccaaaatgttgatatgaattctctgccatatttgcttgatgtt 29282059  T
Q  389 tatatct 395  Q
    |||||||    
T  29282060 tatatct 29282066  T

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Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 112 - 276
Target Start/End: Original strand, 29304106 - 29304271
Alignment:
Q  112 aggaagaggtggaaacaattttggttctaccaaccgtggcagagaaagaggttcttacaaacaagagagaccaaattacagttgttttcaccgttgaaat 211  Q
    ||||| ||||||||||||||||||||| |  ||||||||||||| |||||||| |||||| ||||||||| ||||| |  |||||||| |  || ||||     
T  29304106 aggaaaaggtggaaacaattttggttccaataaccgtggcagaggaagaggttattacaaccaagagagaacaaataatggttgttttaattgtggaaag 29304205  T
Q  212 tttaggcacaaagcagccgattgcaaata-caacatcaggcaaacgtggcagaaaattcatatcaa 276  Q
    | | ||||||||||||| || |||| |||  ||||||| |||||  ||||||| ||||||||||||    
T  29304206 tatgggcacaaagcagctgactgcagatataaacatcaagcaaatatggcagagaattcatatcaa 29304271  T

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Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 29303979 - 29304080
Alignment:
Q  5 acaatttcaacaatggaggaagaaaaaactttagaggtagaggttgaggaacttttagaggaagaggatgtggaaacttcgatcaatggagagacaataa 104  Q
    |||||||||||||||||||||||  ||  || ||||| |||| | ||||||  ||||||||||||||| |||| |||||| | |||||||||||||| ||    
T  29303979 acaatttcaacaatggaggaagaggaagtttcagaggaagagatcgaggaagctttagaggaagaggacgtggcaacttcaaccaatggagagacaacaa 29304078  T
Q  105 tt 106  Q
    ||    
T  29304079 tt 29304080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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