View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1320R-Insertion-21 (Length: 328)
Name: NF1320R-Insertion-21
Description: NF1320R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1320R-Insertion-21 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 8 - 328
Target Start/End: Original strand, 28638207 - 28638532
Alignment:
| Q |
8 |
aattatgccatcaaaaagctactttctctcaactaaccaacattttgtttcctttagcaaacttctctcattttttgtaatcagtttctcacctctaata |
107 |
Q |
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| T |
28638207 |
aattatgccatcaaaaagctactttctctcaactaaccaacattttgtttcctttagcaaacctctctcattttttgtaatcagtttctcacctcaaata |
28638306 |
T |
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| Q |
108 |
gcatctttaataaagaacttaaacaatttttcactctaacaatacaactctcttaaaaaatcaaaattagctcaaaagttatcacatattttggttggt- |
206 |
Q |
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| T |
28638307 |
gcatctctaataaagaacttaaacaatttttcactctaacaatacaactctcctaaaaaatcaaaattagctcaaaagttatcacatattttggttggtt |
28638406 |
T |
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| Q |
207 |
----taagaactaaatccatgtcacaaaacaaaacctagttaacaactgctattagaaatggaagaaagacttaccagttctgatatgttccgatcaatc |
302 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28638407 |
aagataagaactaaatccatgtcacaaaacaaaacctaattaacaactgctattagaaatggaagaaagacttaccagttctgatatgttccgatcaatc |
28638506 |
T |
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| Q |
303 |
cgcgttcataaacgacaccaagtgtg |
328 |
Q |
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|||||||||||||||||||||||||| |
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| T |
28638507 |
cgcgttcataaacgacaccaagtgtg |
28638532 |
T |
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