View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1320R-Insertion-23 (Length: 318)
Name: NF1320R-Insertion-23
Description: NF1320R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1320R-Insertion-23 |
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Alignment Details
Target: chr2 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 9 - 316
Target Start/End: Complemental strand, 43663033 - 43662726
Alignment:
| Q |
9 |
atttgatctggtagttgattcttgctttgatctaccttgttgtaagtgaaatccaatatattatcactacttaagctagtgatatgagagcttggagaag |
108 |
Q |
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| T |
43663033 |
atttgatctggtagttgattcttgctatgatctaccttgttgtaagtgaaatccaatatattatcactacttaagctagtgatatgagagcttggagaag |
43662934 |
T |
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| Q |
109 |
aaactggcaccatatgtgaccaagatgaaccaagtgatccagagttagcatgaaactcctcatgatgatgcccttgttggccataaaaattctcaccttg |
208 |
Q |
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| T |
43662933 |
aaactggcaccatatgtgaccaagatgaaccaagtgatccagagttagcatgaaactcctcatgatgatgcccttgttggccataaaaattctcaccttg |
43662834 |
T |
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| Q |
209 |
agaaacttcatgctttattatatccataaaaggaactcttgaagatggattcataatttgcacatcccagttttctgagtttttaggttgaaaatgatta |
308 |
Q |
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| T |
43662833 |
agaaacttcatgctttattatatccataaaaggaactcttgaagatggattcataatttgcacatcccagttttctgagtttttaggttgaaaatgatta |
43662734 |
T |
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| Q |
309 |
aaaccaag |
316 |
Q |
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|||||||| |
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| T |
43662733 |
aaaccaag |
43662726 |
T |
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