View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1320R-Insertion-8 (Length: 733)

Name: NF1320R-Insertion-8
Description: NF1320R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1320R-Insertion-8
NF1320R-Insertion-8
[»] chr8 (30 HSPs)
chr8 (212-732)||(34723321-34723827)
chr8 (153-222)||(34724239-34724308)
chr8 (253-415)||(15884556-15884718)
chr8 (253-416)||(43027252-43027416)
chr8 (253-382)||(8141049-8141179)
chr8 (247-416)||(14666070-14666240)
chr8 (253-416)||(2467117-2467281)
chr8 (253-416)||(6100419-6100583)
chr8 (253-416)||(8997543-8997707)
chr8 (253-372)||(38922457-38922577)
chr8 (257-410)||(18373961-18374115)
chr8 (248-416)||(45521111-45521279)
chr8 (258-416)||(43032853-43033012)
chr8 (253-383)||(44893310-44893441)
chr8 (253-383)||(583761-583890)
chr8 (253-382)||(10927553-10927683)
chr8 (253-382)||(24837189-24837319)
chr8 (257-416)||(17981392-17981552)
chr8 (253-415)||(7673657-7673816)
chr8 (7-46)||(34724413-34724452)
chr8 (253-338)||(17845680-17845764)
chr8 (253-357)||(34613836-34613941)
chr8 (332-416)||(2964103-2964187)
chr8 (253-416)||(16893884-16894046)
chr8 (257-383)||(44031467-44031599)
chr8 (253-383)||(13085471-13085602)
chr8 (257-383)||(33401831-33401958)
chr8 (253-378)||(1013014-1013140)
chr8 (332-382)||(13357989-13358039)
chr8 (351-416)||(22212514-22212579)
[»] chr4 (46 HSPs)
chr4 (253-381)||(24166398-24166527)
chr4 (253-416)||(38165975-38166139)
chr4 (253-382)||(1446774-1446904)
chr4 (253-382)||(29895735-29895865)
chr4 (253-378)||(53599008-53599134)
chr4 (253-410)||(1940782-1940937)
chr4 (253-416)||(47078406-47078570)
chr4 (268-383)||(15839967-15840082)
chr4 (253-418)||(27248376-27248540)
chr4 (253-383)||(48317307-48317438)
chr4 (253-382)||(43458561-43458691)
chr4 (256-380)||(29588687-29588812)
chr4 (257-416)||(5472847-5473007)
chr4 (285-416)||(42722576-42722708)
chr4 (275-382)||(49260698-49260806)
chr4 (253-383)||(3574478-3574609)
chr4 (286-416)||(7246645-7246776)
chr4 (253-415)||(13073486-13073649)
chr4 (285-416)||(21192622-21192752)
chr4 (253-383)||(41162914-41163045)
chr4 (266-416)||(47682381-47682531)
chr4 (254-383)||(49952178-49952308)
chr4 (274-383)||(55005338-55005448)
chr4 (332-416)||(17080071-17080155)
chr4 (253-416)||(55920982-55921146)
chr4 (253-415)||(33647669-33647832)
chr4 (264-383)||(36262799-36262917)
chr4 (268-382)||(295566-295680)
chr4 (269-382)||(20354601-20354715)
chr4 (315-383)||(20532441-20532510)
chr4 (268-415)||(40780861-40781009)
chr4 (288-410)||(3159474-3159597)
chr4 (253-383)||(12703577-12703708)
chr4 (339-418)||(14567274-14567353)
chr4 (269-382)||(20128273-20128387)
chr4 (253-378)||(38075381-38075507)
chr4 (253-302)||(19651559-19651608)
chr4 (258-378)||(20421727-20421847)
chr4 (332-404)||(8424582-8424654)
chr4 (253-416)||(8888970-8889134)
chr4 (332-416)||(14124044-14124128)
chr4 (332-416)||(30317261-30317345)
chr4 (286-380)||(48015108-48015203)
chr4 (351-418)||(54946296-54946363)
chr4 (329-383)||(50485968-50486022)
chr4 (253-290)||(4736545-4736582)
[»] chr6 (21 HSPs)
chr6 (253-416)||(14107357-14107521)
chr6 (253-416)||(21898595-21898759)
chr6 (253-382)||(2271336-2271464)
chr6 (253-382)||(29333172-29333301)
chr6 (253-416)||(5253222-5253386)
chr6 (253-418)||(8938658-8938824)
chr6 (275-416)||(12606399-12606541)
chr6 (256-416)||(3601034-3601195)
chr6 (332-416)||(9633624-9633708)
chr6 (318-410)||(13391299-13391391)
chr6 (332-416)||(30788852-30788936)
chr6 (256-382)||(13036037-13036164)
chr6 (253-382)||(19230592-19230720)
chr6 (253-405)||(29444775-29444928)
chr6 (253-416)||(8611973-8612137)
chr6 (252-416)||(19089444-19089609)
chr6 (253-301)||(5759575-5759623)
chr6 (253-416)||(6606096-6606260)
chr6 (253-416)||(8932608-8932772)
chr6 (253-416)||(8944074-8944238)
chr6 (329-416)||(5029841-5029928)
[»] chr1 (37 HSPs)
chr1 (253-382)||(5855466-5855596)
chr1 (253-416)||(10422732-10422896)
chr1 (269-382)||(14254302-14254416)
chr1 (253-406)||(40288487-40288641)
chr1 (268-416)||(9659179-9659327)
chr1 (253-416)||(17642004-17642168)
chr1 (253-416)||(11397889-11398052)
chr1 (253-382)||(49078058-49078188)
chr1 (253-416)||(26660082-26660245)
chr1 (257-416)||(32150922-32151082)
chr1 (257-416)||(43959821-43959981)
chr1 (253-382)||(2980965-2981095)
chr1 (253-382)||(17092511-17092641)
chr1 (317-418)||(50371832-50371934)
chr1 (260-416)||(16956417-16956574)
chr1 (248-416)||(18915806-18915975)
chr1 (253-382)||(46929772-46929901)
chr1 (253-381)||(48798105-48798234)
chr1 (253-416)||(8763935-8764099)
chr1 (317-409)||(21849212-21849304)
chr1 (253-416)||(33004015-33004179)
chr1 (254-416)||(41663856-41664019)
chr1 (269-382)||(30927761-30927875)
chr1 (253-382)||(33418149-33418279)
chr1 (256-382)||(47312933-47313059)
chr1 (256-418)||(2567223-2567386)
chr1 (253-407)||(15465909-15466064)
chr1 (317-416)||(44969673-44969772)
chr1 (334-416)||(37339846-37339928)
chr1 (331-416)||(10172971-10173056)
chr1 (270-378)||(10336477-10336586)
chr1 (253-416)||(26325756-26325920)
chr1 (341-416)||(4581682-4581757)
chr1 (317-382)||(13262091-13262157)
chr1 (257-418)||(14357703-14357865)
chr1 (253-377)||(34877934-34878059)
chr1 (272-416)||(45361882-45362027)
[»] chr7 (37 HSPs)
chr7 (248-379)||(4195238-4195370)
chr7 (255-416)||(34659174-34659336)
chr7 (253-416)||(48804629-48804793)
chr7 (253-410)||(5039423-5039581)
chr7 (253-416)||(43346778-43346942)
chr7 (253-416)||(43861971-43862135)
chr7 (256-410)||(1797409-1797564)
chr7 (253-410)||(16802069-16802227)
chr7 (253-382)||(17748415-17748545)
chr7 (256-416)||(5069814-5069975)
chr7 (253-416)||(22993366-22993530)
chr7 (253-383)||(4228786-4228914)
chr7 (253-410)||(13095804-13095962)
chr7 (332-418)||(38578864-38578950)
chr7 (253-382)||(47341822-47341952)
chr7 (253-418)||(22573759-22573924)
chr7 (253-416)||(10047875-10048039)
chr7 (269-378)||(42210299-42210409)
chr7 (253-380)||(43925458-43925586)
chr7 (256-307)||(11607080-11607131)
chr7 (317-419)||(27028289-27028392)
chr7 (272-349)||(45853586-45853664)
chr7 (333-382)||(3353451-3353500)
chr7 (253-409)||(21530694-21530851)
chr7 (332-416)||(4705983-4706067)
chr7 (268-383)||(14535252-14535368)
chr7 (285-416)||(21190779-21190911)
chr7 (253-356)||(22268088-22268192)
chr7 (316-395)||(23658188-23658268)
chr7 (349-409)||(28396166-28396226)
chr7 (273-416)||(36619253-36619397)
chr7 (285-416)||(37514899-37515031)
chr7 (336-416)||(41945503-41945583)
chr7 (253-383)||(45960035-45960165)
chr7 (317-382)||(30827302-30827368)
chr7 (362-416)||(34127644-34127698)
chr7 (252-380)||(42032041-42032170)
[»] chr3 (45 HSPs)
chr3 (253-416)||(13893869-13894033)
chr3 (253-416)||(7328787-7328950)
chr3 (253-416)||(15320129-15320293)
chr3 (253-382)||(33251605-33251735)
chr3 (253-416)||(29127862-29128026)
chr3 (253-416)||(54261169-54261333)
chr3 (253-382)||(45877397-45877527)
chr3 (253-410)||(55069685-55069843)
chr3 (332-416)||(26361967-26362051)
chr3 (257-416)||(28572211-28572371)
chr3 (256-382)||(6462358-6462485)
chr3 (253-383)||(10855327-10855458)
chr3 (275-410)||(15795500-15795635)
chr3 (253-416)||(47749105-47749268)
chr3 (253-383)||(51682987-51683118)
chr3 (253-382)||(3755513-3755643)
chr3 (253-375)||(10040500-10040622)
chr3 (253-383)||(39849015-39849145)
chr3 (253-416)||(7310703-7310867)
chr3 (332-415)||(3507534-3507617)
chr3 (253-383)||(42412807-42412938)
chr3 (253-382)||(26207835-26207965)
chr3 (253-381)||(29135856-29135985)
chr3 (332-416)||(8164576-8164660)
chr3 (253-384)||(28242221-28242353)
chr3 (253-416)||(41630512-41630676)
chr3 (258-369)||(49082772-49082884)
chr3 (253-419)||(29762152-29762319)
chr3 (361-416)||(47164158-47164213)
chr3 (253-382)||(25294903-25295033)
chr3 (253-354)||(50682420-50682522)
chr3 (317-405)||(30767258-30767347)
chr3 (254-378)||(41219537-41219661)
chr3 (317-408)||(26043819-26043911)
chr3 (349-409)||(43330739-43330799)
chr3 (332-383)||(7648763-7648814)
chr3 (361-416)||(36043674-36043729)
chr3 (257-406)||(22405553-22405703)
chr3 (329-379)||(34460547-34460597)
chr3 (332-410)||(35923629-35923707)
chr3 (253-382)||(49198294-49198424)
chr3 (285-378)||(52364838-52364932)
chr3 (331-416)||(15084945-15085030)
chr3 (272-416)||(47219106-47219251)
chr3 (333-410)||(50405609-50405686)
[»] chr2 (50 HSPs)
chr2 (253-416)||(7747217-7747381)
chr2 (253-382)||(22593078-22593207)
chr2 (253-416)||(10026615-10026779)
chr2 (253-416)||(18902529-18902693)
chr2 (253-416)||(38005345-38005509)
chr2 (256-410)||(21286390-21286545)
chr2 (253-383)||(29653571-29653701)
chr2 (257-410)||(7787003-7787157)
chr2 (253-381)||(13026445-13026574)
chr2 (256-404)||(45263678-45263827)
chr2 (253-416)||(331444-331608)
chr2 (269-416)||(25540403-25540551)
chr2 (253-407)||(42770659-42770814)
chr2 (253-416)||(44945537-44945700)
chr2 (253-418)||(2550811-2550977)
chr2 (253-382)||(29422158-29422288)
chr2 (251-418)||(6358148-6358316)
chr2 (253-416)||(8410074-8410238)
chr2 (285-416)||(10823035-10823167)
chr2 (270-416)||(41220595-41220742)
chr2 (296-382)||(35946725-35946811)
chr2 (253-410)||(39201513-39201671)
chr2 (251-416)||(44139425-44139591)
chr2 (256-416)||(37560119-37560280)
chr2 (317-416)||(12455317-12455417)
chr2 (253-416)||(12864167-12864331)
chr2 (252-419)||(38962705-38962873)
chr2 (253-383)||(21180346-21180477)
chr2 (333-418)||(9360745-9360830)
chr2 (317-410)||(24179576-24179669)
chr2 (253-416)||(2528340-2528504)
chr2 (253-416)||(14169608-14169772)
chr2 (253-383)||(15079426-15079557)
chr2 (272-418)||(16034899-16035046)
chr2 (268-382)||(25549686-25549801)
chr2 (253-415)||(20612534-20612699)
chr2 (317-382)||(34130335-34130400)
chr2 (332-416)||(27725963-27726047)
chr2 (253-415)||(10046477-10046639)
chr2 (257-328)||(20963198-20963268)
chr2 (253-343)||(29697467-29697558)
chr2 (248-366)||(40968964-40969083)
chr2 (251-416)||(3811690-3811856)
chr2 (268-382)||(16813198-16813312)
chr2 (268-382)||(16852477-16852591)
chr2 (318-381)||(28525489-28525554)
chr2 (253-378)||(34356149-34356275)
chr2 (268-381)||(39806919-39807033)
chr2 (329-410)||(10669612-10669693)
chr2 (253-302)||(23500795-23500844)
[»] chr5 (45 HSPs)
chr5 (253-382)||(9168286-9168414)
chr5 (253-380)||(38897754-38897881)
chr5 (253-416)||(1538375-1538539)
chr5 (253-416)||(5731919-5732083)
chr5 (252-382)||(19572667-19572798)
chr5 (268-418)||(25417180-25417331)
chr5 (253-382)||(37263185-37263314)
chr5 (253-382)||(41163493-41163622)
chr5 (253-416)||(9812816-9812980)
chr5 (253-416)||(42086271-42086435)
chr5 (286-416)||(12081885-12082016)
chr5 (253-410)||(3653919-3654075)
chr5 (253-416)||(5079275-5079438)
chr5 (253-416)||(12704958-12705122)
chr5 (253-392)||(26077085-26077225)
chr5 (253-383)||(7866525-7866656)
chr5 (294-416)||(40117400-40117523)
chr5 (333-410)||(6764462-6764539)
chr5 (252-416)||(8513462-8513627)
chr5 (253-356)||(16755005-16755109)
chr5 (263-307)||(28862779-28862823)
chr5 (269-328)||(18327730-18327789)
chr5 (253-378)||(20682654-20682781)
chr5 (323-410)||(24463891-24463978)
chr5 (273-418)||(11845798-11845944)
chr5 (317-418)||(14588614-14588716)
chr5 (253-378)||(18136317-18136443)
chr5 (253-382)||(20525782-20525912)
chr5 (253-374)||(28857072-28857194)
chr5 (253-369)||(35403558-35403675)
chr5 (332-416)||(9805028-9805112)
chr5 (248-383)||(35561850-35561986)
chr5 (332-416)||(41801001-41801085)
chr5 (253-416)||(2485141-2485304)
chr5 (315-415)||(21487623-21487721)
chr5 (332-395)||(30995145-30995208)
chr5 (253-307)||(1826801-1826855)
chr5 (253-382)||(30349523-30349653)
chr5 (332-410)||(39099784-39099862)
chr5 (332-382)||(42291538-42291588)
chr5 (253-406)||(18294493-18294646)
chr5 (253-302)||(23383592-23383641)
chr5 (329-378)||(24875366-24875415)
chr5 (322-383)||(25452939-25453000)
chr5 (282-382)||(35638066-35638167)
[»] scaffold0006 (1 HSPs)
scaffold0006 (253-410)||(68463-68618)
[»] scaffold0029 (1 HSPs)
scaffold0029 (253-409)||(40990-41147)
[»] scaffold0004 (1 HSPs)
scaffold0004 (259-383)||(95013-95136)
[»] scaffold0011 (2 HSPs)
scaffold0011 (256-415)||(186467-186626)
scaffold0011 (361-416)||(224372-224427)
[»] scaffold0209 (1 HSPs)
scaffold0209 (253-383)||(12521-12650)
[»] scaffold0086 (1 HSPs)
scaffold0086 (253-382)||(26129-26259)
[»] scaffold0170 (1 HSPs)
scaffold0170 (318-382)||(9856-9921)
[»] scaffold0316 (1 HSPs)
scaffold0316 (317-416)||(1613-1713)
[»] scaffold0291 (1 HSPs)
scaffold0291 (332-416)||(6881-6965)
[»] scaffold0010 (1 HSPs)
scaffold0010 (332-416)||(155710-155794)
[»] scaffold0005 (1 HSPs)
scaffold0005 (339-418)||(250022-250101)
[»] scaffold0384 (1 HSPs)
scaffold0384 (253-382)||(5919-6048)
[»] scaffold0002 (1 HSPs)
scaffold0002 (268-416)||(319383-319532)
[»] scaffold0009 (1 HSPs)
scaffold0009 (329-416)||(42831-42918)
[»] scaffold0016 (1 HSPs)
scaffold0016 (253-302)||(8824-8873)


Alignment Details
Target: chr8 (Bit Score: 304; Significance: 1e-171; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 212 - 732
Target Start/End: Complemental strand, 34723827 - 34723321
Alignment:
Q  212 agttaatcgttcttatctgtaattaaaatgcacataatatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaat 311  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  34723827 agttaatcgttattatctgtaattaaaatgcacataatatgaaccaagttgtttgagctccggtggcaatgagctccttccaaagacatattcgggaaat 34723728  T
Q  312 gctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgt 411  Q
     || ||||||||| |||||  ||||| |||||||  |||||||||| |||||||| |||| |||||| |||        |||||||||||||||||||||    
T  34723727 actaagttcgattcccagggaaacaatgtttggc--ttgcgcatgcctttacgcaagagctggattaatcg--------tggtgtgtcgaaaaccggtgt 34723638  T
Q  412 gaaagaagnnnnnnnntgcacataatatgttgtgtgctgtggggagaagggagacagagagaagaagaaacctgcttcattttgtctttcctgcgtccac 511  Q
    ||||| |         |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34723637 gaaagca-aaaaaaaatgcacataatatgttgtgtgctgtggggagaatggagacagagagaagaagaaacctgcttcattttgtctttcctgcgtccac 34723539  T
Q  512 ctgtccactgtctctctggcctatgctactctgctcaatccaaatggttgatagttgaaacactttttt-ccattcaaacaa----ctacgttgtttgtc 606  Q
    ||||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||||||| ||||||||||||    ||||||||||||||    
T  34723538 ctgtccactgtctctctggcct--------ctgctcaatccaaatggttgaaagttgaaacactttttttccattcaaacaaacaactacgttgtttgtc 34723447  T
Q  607 gtttttgcgtccacctgtcactgttccacacttccactctctctctgtttattctaaatggattgaaagttgaaacacnnnnnnnnccattccattgcct 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||    
T  34723446 gtttttgcgtccacctgtcactgttccacacttccactctctctctgtttattctaaatggattgaaagttgaaacactttttttcccattccattgcct 34723347  T
Q  707 cactctacacactttcattccagtac 732  Q
    ||||||||||||||||||||||||||    
T  34723346 cactctacacactttcattccagtac 34723321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 153 - 222
Target Start/End: Complemental strand, 34724308 - 34724239
Alignment:
Q  153 gataactattttaaatttttgcgtgataacattcaaattagtacataaaatgatatgatagttaatcgtt 222  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34724308 gataactatttcaaatttttgcgtggtaacattcaaattagtacataaaatgatatgatagttaatcgtt 34724239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 253 - 415
Target Start/End: Complemental strand, 15884718 - 15884556
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||||||| |||||||||| || || |||||||||| ||||||   ||| ||| | | |||||||| ||||| |||||||  ||||| | ||||    
T  15884718 aaccaagttgattgggctccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgattcccaggggaacaacacttggcaagtgcg 15884619  T
Q  353 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 415  Q
    ||||| | |||||||||||||||||||||||  | |||||||| |||| ||||||||| ||||    
T  15884618 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 15884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 43027252 - 43027416
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    |||||||||| ||| |||||||||||||||| ||| || |||  ||||||| ||| ||| ||| |||||||| |||||| |||||||| ||| ||| |||    
T  43027252 aaccaagttgtttgggctccagtggcaatgagctcatttcaagaacgtatttggggaatactgggttcgattcccaggaggaacaacgattgtccaatgc 43027351  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| |||||||||||||||   ||||||| || |||| |||||| || |||||    
T  43027352 gcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaaag 43027416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 8141049 - 8141179
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || || ||||||| |||||||||||| ||| | | |||||||||||||| | ||||||| ||||||| |||    
T  8141049 aaccaagttgtttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgc 8141148  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | |||||| |||| | ||||||||    
T  8141149 gcatgcctctacgcatgagctgaattagtcg 8141179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 247 - 416
Target Start/End: Complemental strand, 14666240 - 14666070
Alignment:
Q  247 aatatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggc 345  Q
    ||||| |||||||||| ||| ||||||||||||| || ||| |||||| ||||||| |||| ||| | | |||||||| ||||| | ||||||  |||||    
T  14666240 aatattaaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggc 14666141  T
Q  346 cattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    || ||||||||| | ||||||| |||| ||||||||||  |   |||||| |||||||||||||| |||||    
T  14666140 cagtgcgcatgcctctacgcacaagccagattagtcgcccacagttggtgggtcgaaaaccggtgcgaaag 14666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 2467281 - 2467117
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||||||| || |||||||  ||||||| |||    
T  2467281 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgc 2467182  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||  | || ||| |||||||||||||||   |   ||||||||||| ||||||||| |||||    
T  2467181 gcatgtctctatgcatgagccggattagtcgtccacaattggtgtgtcggaaaccggtgcgaaag 2467117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 6100419 - 6100583
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||| ||||||||| || |||||| ||| ||||||| |||| ||| | | |||||||| ||||||| ||||||| ||||||| |||    
T  6100419 aaccaagttgtttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 6100518  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||   |||||| |||||||||||||||   | |||| ||| ||||||||||| || |||||    
T  6100519 gcatgccactacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccgctgcgaaag 6100583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 8997707 - 8997543
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| |||  |||||||||||| ||||||||| ||| ||| |||||||| ||| | | |||||||| | | || ||||||||||| |||| | |    
T  8997707 aaccaagttgcttggactccagtggcaaggaactcctttcaaggacatattcggggaataccgtgttcgattcctaaggggaacaacgtttcgccagttc 8997608  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| ||||| |||||||||   |||||||||| |||| ||||||||| |||||    
T  8997607 gcatgcctatacgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaag 8997543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 372
Target Start/End: Complemental strand, 38922577 - 38922457
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| |||| | |||||||| ||||||| |||    
T  38922577 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttggccagtgc 38922478  T
Q  352 gcatgcatttacgcacgagcc 372  Q
    |||||| ||||||||||||||    
T  38922477 gcatgcctttacgcacgagcc 38922457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 257 - 410
Target Start/End: Original strand, 18373961 - 18374115
Alignment:
Q  257 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgcat 355  Q
    |||||| ||| |||||| |||||| || ||| |||||||||  ||| |||||||| |   ||||||||  |||| ||||||||| ||| ||| |||||||    
T  18373961 aagttgtttgggctccaatggcaaggagctcattccaaagatatatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcat 18374060  T
Q  356 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    || | |||||| |||||||||||||||   | |||||||| ||||||||||||||    
T  18374061 gcctctacgcatgagccggattagtcgtccaactttggtgggtcgaaaaccggtg 18374115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 248 - 416
Target Start/End: Original strand, 45521111 - 45521279
Alignment:
Q  248 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggcca 347  Q
    |||| |||||||||| ||| ||||||||||||| ||  || |||||| || |||  |||| ||| | | |||||||| ||||| |||||||  |||  ||    
T  45521111 atatcaaccaagttgcttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcgattcccaggggaacaacacttgatca 45521210  T
Q  348 ttgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
     ||||||||| | |||||| ||||||||||||||||  | ||||| || |||| ||||||||| |||||    
T  45521211 gtgcgcatgcctctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaag 45521279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 258 - 416
Target Start/End: Original strand, 43032853 - 43033012
Alignment:
Q  258 agttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatg 356  Q
    ||||| ||| ||||||||||||| ||  |||||||||| | ||||  |||||||   |  ||||||| ||||| | ||||||| ||||||| ||||||||    
T  43032853 agttgtttgggctccagtggcaaggagttccttccaaaaatgtatctgggaaatatcggattcgattcccagggggaacaacgcttggccagtgcgcatg 43032952  T
Q  357 catttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    | | ||| |||||||||||||||||||  | |||||||| |||  ||||||||| |||||    
T  43032953 cctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 43033012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 383
Target Start/End: Complemental strand, 44893441 - 44893310
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||| ||||| | || |||||| | ||||||| ||     
T  44893441 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgt 44893342  T
Q  352 gcatgcatttacgcacgagccggattagtcgc 383  Q
    |||||| | |||||||||||||||||| ||||    
T  44893341 gcatgcctctacgcacgagccggattaatcgc 44893310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 383
Target Start/End: Original strand, 583761 - 583890
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| |||| |||||||| || || ||||||| |||||| ||| ||||| | | |||||||| | ||| |||||||| ||| ||| ||||    
T  583761 aaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattcctagg-gaacaacgcttgaccagtgcg 583859  T
Q  353 catgcatttacgcacgagccggattagtcgc 383  Q
    ||||| | |||||| ||| ||||||||||||    
T  583860 catgcctctacgcatgagtcggattagtcgc 583890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 10927553 - 10927683
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||| ||||||||| || || ||| ||| ||||||  |||| ||| | | |||||||| | ||||| ||||||| ||||||| |||    
T  10927553 aaccaagttgcttgggcttcagtggcaaggagcttctttcaaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgc 10927652  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | |||||| |||||||||||||||    
T  10927653 gcatgcctctacgcatgagccggattagtcg 10927683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 24837189 - 24837319
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || ||||||||||  |||||  |||| ||| | | |||||||| ||| ||||||||||| ||||||| ||     
T  24837189 aaccaagttgcttgggctccagtggcaaggagctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgt 24837288  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
     ||||| | || |||||||| ||||||||||    
T  24837289 tcatgcctctaagcacgagcaggattagtcg 24837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 257 - 416
Target Start/End: Original strand, 17981392 - 17981552
Alignment:
Q  257 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcat 355  Q
    |||||| ||| ||||||||||||| || |||||||||| || |||  |||||||| | | |||||||| ||| || |||||||  ||| ||| || ||||    
T  17981392 aagttgcttgggctccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcat 17981491  T
Q  356 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    || | |||||||||| || |||||| ||  | |||||||| |||| ||||||||| |||||    
T  17981492 gcctctacgcacgagtcgaattagttgcccagctttggtgagtcggaaaccggtgcgaaag 17981552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 253 - 415
Target Start/End: Complemental strand, 7673816 - 7673657
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||  ||| |||    |||||||||    || |||||||||||||| | || |    
T  7673816 aaccaagttgcttg-gctccagtggcaaggagctccttccaaggacgtatctggggaatatcaagttcgattag--ggggaacaacgtttggctagtgtg 7673720  T
Q  353 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 415  Q
    ||||| | |||||||||||||||||  ||||  |||||| |||  ||||||||||||| ||||    
T  7673719 catgcctctacgcacgagccggatttttcgcccatctttagtggatcgaaaaccggtgcgaaa 7673657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 34724452 - 34724413
Alignment:
Q  7 catctaaaaatttgtaggcggttttatatttaaggacaaa 46  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  34724452 catctaaaaatttgtagacggttttatatttaaggacaaa 34724413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 17845680 - 17845764
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaac 338  Q
    |||||||||| ||| |||||||||||||||| |||||||||| || ||| ||||| ||| ||| ||| |||| ||||| |||||||    
T  17845680 aaccaagttgtttgggctccagtggcaatgagctccttccaaggatgtactcggggaatactg-gtttgattcccaggggaacaac 17845764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 34613941 - 34613836
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    |||||| ||| ||| |||||||||||||||| |||||||||||  ||||| |||| |||   | |||||||| |||||| ||||||||| |||||| | |    
T  34613941 aaccaaattgtttgggctccagtggcaatgagctccttccaaaaccgtatccggggaatatcgggttcgattcccaggaggaacaacgtctggccagtac 34613842  T
Q  352 gcatgc 357  Q
    ||||||    
T  34613841 gcatgc 34613836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 2964103 - 2964187
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||| ||||||| || |||||| | ||||||||| |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  2964103 gaacaacgcttggccaatgtgcatgcctctacgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 2964187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 16893884 - 16894046
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| |||  |||||||| ||||||||||||| ||||||| |||| |||   | ||||||||  || || ||| |||| ||||||| | |    
T  16893884 aaccaagttgcttgggctatagtggcaaggaactccttccaatgacgtatccggggaatatcgggttcgattcacagggggaataacgcttggccagtac 16893983  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
     ||||| |||||||| |||||||||| |||||  | |||||||| |||| ||||||||| |||||    
T  16893984 acatgcctttacgcatgagccggatt-gtcgcccacctttggtg-gtcggaaaccggtgcgaaag 16894046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 257 - 383
Target Start/End: Complemental strand, 44031599 - 44031467
Alignment:
Q  257 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggcc-----attg 350  Q
    |||||| |||||||| |||||||| ||||||||||||| || |||  ||||||||   | |||||||||||| || |||||||| ||||||     | ||    
T  44031599 aagttgtttgagctctagtggcaaggaactccttccaaggatgtaaccgggaaatatcgggttcgatttccagggggaacaacgcttggccagtgtagtg 44031500  T
Q  351 cgcatgcatttacgcacgagccggattagtcgc 383  Q
     |||||| | | |||||||||||||||||||||    
T  44031499 tgcatgcctctgcgcacgagccggattagtcgc 44031467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 383
Target Start/End: Original strand, 13085471 - 13085602
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 351  Q
    |||||| ||| ||| ||||||||||| | || |||||||||| ||||||| |||| ||| | | ||||||||  ||| | ||||||||||| |||| ||     
T  13085471 aaccaacttgtttgggctccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgt 13085570  T
Q  352 gcatgcatttacgcacgagccggattagtcgc 383  Q
    |||| | | |||||||||||| ||||| ||||    
T  13085571 gcatacctctacgcacgagccagattaatcgc 13085602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 257 - 383
Target Start/End: Complemental strand, 33401958 - 33401831
Alignment:
Q  257 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcat 355  Q
    |||||| ||| ||||||||||||| || |||||| ||| |||||| ||||| ||| | | ||||||||| || || |||||||  ||| ||| || ||||    
T  33401958 aagttgtttgggctccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcat 33401859  T
Q  356 gcatttacgcacgagccggattagtcgc 383  Q
    || | |||||| ||| ||||||||||||    
T  33401858 gcctctacgcatgagtcggattagtcgc 33401831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 378
Target Start/End: Complemental strand, 1013140 - 1013014
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || ||  |||||| ||||||| |||| ||| | | |||||||| ||| || |||||||| ||||||| | |    
T  1013140 aaccaagttgcttgggctccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagtac 1013041  T
Q  352 gcatgcatttacgcacgagccggatta 378  Q
     ||||| | |||||| |||||| ||||    
T  1013040 acatgcctctacgcatgagccgaatta 1013014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 13358039 - 13357989
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 382  Q
    |||||||||||||||| || |||||| | || |||||||||||||||||||    
T  13358039 gaacaacgtttggccaatgtgcatgcctctatgcacgagccggattagtcg 13357989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 351 - 416
Target Start/End: Complemental strand, 22212579 - 22212514
Alignment:
Q  351 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||| | |||||||| ||||||||||||||  | ||||||||  ||||||||||||| |||||    
T  22212579 cgcatgcttctacgcacgggccggattagtcgctcacctttggtggttcgaaaaccggtgcgaaag 22212514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 253 - 381
Target Start/End: Original strand, 24166398 - 24166527
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 351  Q
    |||||||||||||| ||||||||||||| || |||||||||| |||||| ||||| ||| ||| |||||||| || |||  ||||||||||||||| |||    
T  24166398 aaccaagttgattgggctccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgattcccaagggaaacaacgtttggccagtgc 24166497  T
Q  352 gcatgcatttacgcacgagccggattagtc 381  Q
    |||||| | |||||||||||| ||||||||    
T  24166498 gcatgcctctacgcacgagccagattagtc 24166527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 38165975 - 38166139
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||| |||| ||| ||| ||| |||| ||||| | ||||||| ||||||| |||    
T  38165975 aaccaagttgtttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgc 38166074  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||  | |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  38166075 gcatggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 38166139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 1446774 - 1446904
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  1446774 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 1446873  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | |||||| |||||||||||||||    
T  1446874 gcatgcctctacgcatgagccggattagtcg 1446904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 29895735 - 29895865
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  29895735 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 29895834  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | |||||| |||||||||||||||    
T  29895835 gcatgcctctacgcatgagccggattagtcg 29895865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 253 - 378
Target Start/End: Original strand, 53599008 - 53599134
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||||||| ||||||||||||||| |||    
T  53599008 aaccaagttgtttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgc 53599107  T
Q  352 gcatgcatttacgcacgagccggatta 378  Q
    |||||| | |||||| |||||||||||    
T  53599108 gcatgcctctacgcatgagccggatta 53599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 410
Target Start/End: Complemental strand, 1940937 - 1940782
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| |||| |||||||| || |||||||||| ||||||  ||||||||   | |||||||| ||||| | ||||||| ||||    |||    
T  1940937 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttggg---tgc 1940841  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    |||||| | |||||||||||||||||||||||  | |||||||| ||||||||||||||    
T  1940840 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtg 1940782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 47078406 - 47078570
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| | ||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||||| | ||||||| ||||||| |||    
T  47078406 aaccaagttgcttgggttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgc 47078505  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
     ||||| | |||||||||||||||||||||||  | | |||||| |||| ||||| ||| |||||    
T  47078506 acatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccagtgcgaaag 47078570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 268 - 383
Target Start/End: Complemental strand, 15840082 - 15839967
Alignment:
Q  268 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 367  Q
    ||||||||||||| || |||||||||| |||||| | ||| ||| | | |||||||| | || |||| |||||||||||| ||||||||| | ||||||     
T  15840082 gctccagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcctagaagaataacgtttggccagtgcgcatgcctctacgcat 15839983  T
Q  368 gagccggattagtcgc 383  Q
    ||||||||||||||||    
T  15839982 gagccggattagtcgc 15839967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 253 - 418
Target Start/End: Original strand, 27248376 - 27248540
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||| | |||||| |||||||| |||||||  ||    
T  27248376 aaccaagttgcttgggctccagtggcaacgagctccttccaaggacgtatccggggaataccgggttcgagtcccaggaggaacaacgcttggcca--gc 27248473  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    |||||| | |||||| ||||| ||||||||||  | |||||||  |||  |||| ||||||||||||    
T  27248474 gcatgcctctacgcaggagccagattagtcgcccacctttggtaggtcagaaactggtgtgaaagaa 27248540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 253 - 383
Target Start/End: Complemental strand, 48317438 - 48317307
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || ||| |||||| ||||||||||  |||| |||  |||||||| ||||| |||||||| |||| || ||     
T  48317438 aaccaagttgcttgggctccagtggcaaagagctcattccaatgacgtattcgaaaaatactggattcgattttcaggaggaacaacgcttggtcagtgt 48317339  T
Q  352 gcatgcatttacgcacgagccggattagtcgc 383  Q
    | |||| | |||||||||||||||||||||||    
T  48317338 gtatgcctctacgcacgagccggattagtcgc 48317307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 43458561 - 43458691
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    |||||||||| ||| |||||||||||||  | ||| |||||| |||||||| ||| ||| |||  ||||||| |||||| ||| |||| ||||||| |||    
T  43458561 aaccaagttgcttgggctccagtggcaagaagctcattccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgc 43458660  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | |||| |||||||||||||||||    
T  43458661 gcatgcctctacggacgagccggattagtcg 43458691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 256 - 380
Target Start/End: Original strand, 29588687 - 29588812
Alignment:
Q  256 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgca 354  Q
    ||||||||||| ||||||||||||| || ||| ||||||||||||   |||||||| | | |||||||| ||||| | ||||| | ||||| | ||||||    
T  29588687 caagttgattgggctccagtggcaaggagctcattccaaagacgtgcccgggaaataccgggttcgattcccaggggaaacaaagcttggctagtgcgca 29588786  T
Q  355 tgcatttacgcacgagccggattagt 380  Q
    ||| | ||||||||||||||||||||    
T  29588787 tgcctctacgcacgagccggattagt 29588812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 257 - 416
Target Start/End: Complemental strand, 5473007 - 5472847
Alignment:
Q  257 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcat 355  Q
    |||||| ||| ||||||||||||| || ||| || ||| ||||||| |||| ||| |   ||| ||||  |||| ||| ||||| ||||||| |||||||    
T  5473007 aagttgtttgggctccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcat 5472908  T
Q  356 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    || | |||||||||||||||||||||||  | |||||||| ||||||||| |||| |||||    
T  5472907 gcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaactggtgcgaaag 5472847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 285 - 416
Target Start/End: Complemental strand, 42722708 - 42722576
Alignment:
Q  285 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 383  Q
    |||||||||| ||||||  |||||||| | | |||| ||| ||||||| ||||||| ||||||| ||||||||| | |||||| |||||||||||||||     
T  42722708 ctccttccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgt 42722609  T
Q  384 atatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
      | |||| ||| |||||||||||||| |||||    
T  42722608 tcacctttagtgggtcgaaaaccggtgcgaaag 42722576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 275 - 382
Target Start/End: Complemental strand, 49260806 - 49260698
Alignment:
Q  275 tggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgcacgagccg 373  Q
    |||||| ||||||||||||| || |||| |||| ||| |||| ||| ||| ||| || |||||||| ||||||| ||||||||| | |||||||||||||    
T  49260806 tggcaaggaactccttccaaggatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccg 49260707  T
Q  374 gattagtcg 382  Q
    |||||||||    
T  49260706 gattagtcg 49260698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 383
Target Start/End: Complemental strand, 3574609 - 3574478
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||    || ||| | |||||| ||| ||| ||||||||||  ||||||| |||    
T  3574609 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctagggaataccgagttcaattcccagggagaacaacacttggccagtgc 3574510  T
Q  352 gcatgcatttacgcacgagccggattagtcgc 383  Q
    |||||| | |||||||||| ||||||||||||    
T  3574509 gcatgcctctacgcacgagtcggattagtcgc 3574478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 286 - 416
Target Start/End: Complemental strand, 7246776 - 7246645
Alignment:
Q  286 tccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgca 384  Q
    ||||||||| ||||||  |||| ||| ||| |||||||| | || | |||||||| ||||||| ||||||||| | |||||| ||||||||||||||||     
T  7246776 tccttccaaggacgtacccggggaatactgggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcc 7246677  T
Q  385 tatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
     | |||||||| |||| ||||||||| |||||    
T  7246676 cacctttggtgggtcggaaaccggtgcgaaag 7246645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 415
Target Start/End: Original strand, 13073486 - 13073649
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| |||| ||||||||||| |||||||||| ||||||   ||  ||| | |||||||||| ||| || |||||| ||||||||| |||    
T  13073486 aaccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacctggagaataccgagttcgattcccatggggaacaatgtttggccagtgc 13073585  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 415  Q
    |||| | | |||||| || || |||||||||  || |||||||| |||| ||||||||| ||||    
T  13073586 gcatacctctacgcatgaaccagattagtcgtttacctttggtgggtcggaaaccggtgcgaaa 13073649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 285 - 416
Target Start/End: Original strand, 21192622 - 21192752
Alignment:
Q  285 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgca 384  Q
    |||||||||| |||||||| ||||||| | | |||||| ||||  | |||||||||| ||||| ||||||||| | |||||||||| ||||||| ||||     
T  21192622 ctccttccaatgacgtatttgggaaataccgggttcgagttccgag-gaacaacgttgggccagtgcgcatgcctctacgcacgagtcggattaatcgcc 21192720  T
Q  385 tatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
     |  ||||||| |||||||||||||| |||||    
T  21192721 cacatttggtgagtcgaaaaccggtgcgaaag 21192752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 383
Target Start/End: Complemental strand, 41163045 - 41162914
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||| ||| || |||||||||| ||||||| |||||||| | ||||||||||||||| | |||||||  ||||||| ||     
T  41163045 aaccaagttgcttgggctccagtgacaaggagctccttccaaggacgtatccgggaaataccgagttcgatttccagagggaacaacacttggccagtgt 41162946  T
Q  352 gcatgcatttacgcacgagccggattagtcgc 383  Q
     ||||| | || ||| |||||| |||||||||    
T  41162945 acatgcttctatgcatgagccgaattagtcgc 41162914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 266 - 416
Target Start/End: Complemental strand, 47682531 - 47682381
Alignment:
Q  266 gagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgc 365  Q
    ||||||||| | ||| |||||||||| |||||||||| |||  |||  ||| || ||||  |||| ||| |||||||||||| ||| ||||  | |||||    
T  47682531 gagctccagggacaaggaactccttctaaagacgtatccggagaatattgaatttgattctcaggggaataacgtttggccagtgcacatgtctctacgc 47682432  T
Q  366 acgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||||| ||||||||  | |||||||| |||| ||||||||| |||||    
T  47682431 acgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaag 47682381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 254 - 383
Target Start/End: Complemental strand, 49952308 - 49952178
Alignment:
Q  254 accaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcg 352  Q
    ||||||||| | ||| |||| |||||| || |||||||||| ||||||||||||||||  |  ||| ||||| ||| || |||||||||||| || ||||    
T  49952308 accaagttgttggagttccattggcaaggagctccttccaaggacgtattcgggaaatattaggtttgattttcagaagaaacaacgtttggtcagtgcg 49952209  T
Q  353 catgcatttacgcacgagccggattagtcgc 383  Q
    || || | |||||| ||||||||||||||||    
T  49952208 cacgcctctacgcatgagccggattagtcgc 49952178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 274 - 383
Target Start/End: Complemental strand, 55005448 - 55005338
Alignment:
Q  274 gtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagcc 372  Q
    |||||||||| ||||||||||||||||||  ||||||| | || |||||||  |||| ||| ||||| ||| ||||||||||||| | ||||||| || |    
T  55005448 gtggcaatgagctccttccaaagacgtatctgggaaataccgaattcgattcgcaggggaaacaacgcttgaccattgcgcatgcctctacgcacaagtc 55005349  T
Q  373 ggattagtcgc 383  Q
    |||||||||||    
T  55005348 ggattagtcgc 55005338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 17080071 - 17080155
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||| ||||||| ||||||||| | |||||| ||||||||||||||||| | ||||| ||  ||||||||||||| |||||    
T  17080071 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgcgaaag 17080155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 55920982 - 55921146
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||| |  |||| ||| | | |||||||| ||| || |||||||  |||| || |||    
T  55920982 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgc 55921081  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||| | ||||||||||| ||||  | |||||||| |||| ||||||||| |||||    
T  55921082 gcatgcctctacgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgcgaaag 55921146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 415
Target Start/End: Original strand, 33647669 - 33647832
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| |||| |||||||| || |||||| ||| |||||||  ||| ||| | | |||||||||||| ||||||||||| ||| ||| |||    
T  33647669 aaccaagttgcttgggctctagtggcaaggagctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtgc 33647768  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 415  Q
     ||| | | ||||||||| || |||||||||   ||||||||||  ||| ||||||||| ||||    
T  33647769 acattcctctacgcacgaaccagattagtcgttcatctttggtggatcggaaaccggtgcgaaa 33647832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 264 - 383
Target Start/End: Complemental strand, 36262917 - 36262799
Alignment:
Q  264 ttgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttac 363  Q
    |||||||||||||||||  | |||||||||| ||||||  |||  ||| | | |||||||| ||||| |||||||| ||||||| ||| ||||| | |||    
T  36262917 ttgagctccagtggcaagaagctccttccaaggacgtacccggagaataccgggttcgattcccagg-gaacaacgcttggccagtgcacatgcctctac 36262819  T
Q  364 gcacgagccggattagtcgc 383  Q
    ||||||| ||||||||||||    
T  36262818 gcacgagtcggattagtcgc 36262799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 295680 - 295566
Alignment:
Q  268 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 367  Q
    ||||||||||||| |||| ||||| || ||||||| |||| ||| |    ||||||| ||||  |||||||||||||||| ||||||||| | |||||||    
T  295680 gctccagtggcaaggaacaccttctaaggacgtatccggggaataccagattcgattcccagaggaacaacgtttggccagtgcgcatgcctctacgcac 295581  T
Q  368 gagccggattagtcg 382  Q
    || || |||||||||    
T  295580 gaaccagattagtcg 295566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 269 - 382
Target Start/End: Original strand, 20354601 - 20354715
Alignment:
Q  269 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcac 367  Q
    |||||||||||| || |||||||||| |||| | |||  |||| | ||||| |||||||||| ||||||||| ||||| | ||||||||| | ||||||     
T  20354601 ctccagtggcaaggatctccttccaaggacgaactcgaaaaataccgagtttgatttccagggagaacaacgcttggctagtgcgcatgcctctacgcat 20354700  T
Q  368 gagccggattagtcg 382  Q
    ||| |||||||||||    
T  20354701 gagtcggattagtcg 20354715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 315 - 383
Target Start/End: Complemental strand, 20532510 - 20532441
Alignment:
Q  315 gagttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 383  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||| | |||||| ||||||||| ||||||    
T  20532510 gagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggataagtcgc 20532441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 268 - 415
Target Start/End: Complemental strand, 40781009 - 40780861
Alignment:
Q  268 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgcgcatgcatttacgca 366  Q
    ||||||||||||| || || |||  || ||||||||||| ||||   | |||||||| || ||| |||||||| |||| || ||||||||| | ||||||    
T  40781009 gctccagtggcaaggagcttcttttaaggacgtattcggaaaatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctacgca 40780910  T
Q  367 cgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 415  Q
     |||||||||||||||   | |||||||| |||| ||||||||| ||||    
T  40780909 tgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 288 - 410
Target Start/End: Complemental strand, 3159597 - 3159474
Alignment:
Q  288 cttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcata 386  Q
    ||||||| ||||||| |||  ||| | | |||||| ||||||| | ||||||| ||||||| ||||||||| | |||||||||||| ||||||||||  |    
T  3159597 cttccaaggacgtatccggagaataccgggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctca 3159498  T
Q  387 tctttggtgtgtcgaaaaccggtg 410  Q
     | |||||| |||| |||||||||    
T  3159497 ccattggtgggtcggaaaccggtg 3159474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 253 - 383
Target Start/End: Complemental strand, 12703708 - 12703577
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| ||  |||||| || |||||| ||| | ||| ||||||||||||||||| | |||||||| ||| ||| ||     
T  12703708 aaccaagttgcttgggctccagtggcaaggagatccttcaaaggacgtactcgaggaatactgagttcgatttccagtgggaacaacgcttgaccagtgt 12703609  T
Q  352 gcatgcatttacgcacgagccggattagtcgc 383  Q
    | |||  | ||||||  |||||||||||||||    
T  12703608 gtatgtctctacgcataagccggattagtcgc 12703577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 339 - 418
Target Start/End: Original strand, 14567274 - 14567353
Alignment:
Q  339 gtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||    |||||||| |||| ||| ||||| |||||||    
T  14567274 gtttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaagaa 14567353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 269 - 382
Target Start/End: Original strand, 20128273 - 20128387
Alignment:
Q  269 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcac 367  Q
    |||||| ||||| ||  ||||||||| ||||||| |||| ||| ||| ||||||||  |||| | ||||| | ||||||| ||||||||| |||||||||    
T  20128273 ctccagcggcaaggagttccttccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcac 20128372  T
Q  368 gagccggattagtcg 382  Q
    ||||  |||||||||    
T  20128373 gagctagattagtcg 20128387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 378
Target Start/End: Original strand, 38075381 - 38075507
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||| ||||| ||  ||||||||| |||||||||||  ||| | | ||||||||  |||| | ||||||| ||||||| |||    
T  38075381 aaccaagttgtttgggctccagcggcaaggagttccttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgc 38075480  T
Q  352 gcatgcatttacgcacgagccggatta 378  Q
    |||||| | |||||| |||||| ||||    
T  38075481 gcatgcctctacgcatgagccgaatta 38075507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 19651608 - 19651559
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 302  Q
    |||||||||| ||| |||||||||||||||| |||||||||| |||||||    
T  19651608 aaccaagttgtttgggctccagtggcaatgagctccttccaaggacgtat 19651559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 378
Target Start/End: Original strand, 20421727 - 20421847
Alignment:
Q  258 agttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatg 356  Q
    ||||| ||| ||| ||||||||| || |||||| |||||||||||  ||| ||| ||| |||||||||||| || |||||||  ||||||| ||||||||    
T  20421727 agttgcttgggcttcagtggcaaggagctcctttcaaagacgtatctggggaatactg-gttcgatttccagggggaacaacacttggccagtgcgcatg 20421825  T
Q  357 catttacgcacgagccggatta 378  Q
    | | |||||| ||||| |||||    
T  20421826 cctctacgcatgagccagatta 20421847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 8424582 - 8424654
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaa 404  Q
    |||||||||||||||| ||||||||| | || |||||||||  |||| ||||  |||||||||| ||||||||    
T  8424582 gaacaacgtttggccagtgcgcatgcctctatgcacgagccaaattaatcgctcatctttggtgggtcgaaaa 8424654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 8888970 - 8889134
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| |||| || ||||| || ||||||| || ||||||| |||| ||| | | |||||||| | ||| | ||||||  |||| || |||    
T  8888970 aaccaagttgtttgggctctagcggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgc 8889069  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||  | |||||| |||||||||||||||   | |||||||| |||| |||||||||| ||||    
T  8889070 gcatggctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgtaaaag 8889134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 14124044 - 14124128
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||| |||||||| ||||||||| | ||| |||||||||||||||||||  | | |||||| || | ||||||||| |||||    
T  14124044 gaacaacatttggccagtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaag 14124128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 30317261 - 30317345
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||| ||||||| | || |||| | ||||||||||||| |||||||||  | |||||||| |||| |||||| ||||||||    
T  30317261 gaacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacctttggtgggtcggaaaccgatgtgaaag 30317345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 380
Target Start/End: Complemental strand, 48015203 - 48015108
Alignment:
Q  286 tccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagt 380  Q
    ||||||||||||||||  || | ||| | | |||||||| |||| | |||||||| ||||||| |||||| || | ||||||||||||||||||||    
T  48015203 tccttccaaagacgtacccgaggaataccgggttcgattcccagtgggaacaacgcttggccagtgcgcaagcctctacgcacgagccggattagt 48015108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 418
Target Start/End: Original strand, 54946296 - 54946363
Alignment:
Q  351 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    ||||||| | |||||| ||||||||||||||||  ||| |||||| |||| ||||||| |||||||||    
T  54946296 cgcatgcctctacgcatgagccggattagtcgcccatcattggtgggtcggaaaccggcgtgaaagaa 54946363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 383
Target Start/End: Original strand, 50485968 - 50486022
Alignment:
Q  329 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 383  Q
    ||||||||||| |||||||   ||||||| | |||||||||||||||||||||||    
T  50485968 ggagaacaacgattggccagaacgcatgcctctacgcacgagccggattagtcgc 50486022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 290
Target Start/End: Original strand, 4736545 - 4736582
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactcctt 290  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  4736545 aaccaagttgtttgagctccagtggcaatgagctcctt 4736582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 8e-26; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 14107521 - 14107357
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || ||||||||||||||||||||||| ||| | | |||||||| |||||| |||||||| ||| ||| |||    
T  14107521 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgc 14107422  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
     ||||| | |||||| ||||||||||||||||  ||  || ||| |||| ||||||||| |||||    
T  14107421 acatgcctctacgcatgagccggattagtcgcccattattagtgggtcggaaaccggtgcgaaag 14107357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 21898595 - 21898759
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| |||||| |||||||| ||||||| |||    
T  21898595 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 21898694  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| |||||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  21898695 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 21898759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 253 - 382
Target Start/End: Complemental strand, 2271464 - 2271336
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||||||| ||| | | ||||||||  || |||||||||| || |||| ||||    
T  2271464 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattctca-gagaacaacgcttagccagtgcg 2271366  T
Q  353 catgcatttacgcacgagccggattagtcg 382  Q
    ||||  | ||||||||||||||||||||||    
T  2271365 catgtctctacgcacgagccggattagtcg 2271336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 253 - 382
Target Start/End: Complemental strand, 29333301 - 29333172
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| |||| ||||||||||| |||||||||| ||||||  | || ||| | | |||||||||||||| |||||||||||||||| ||||    
T  29333301 aaccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacccagggaataccgggttcgatttccaggggaacaacgtttggccagtgcg 29333202  T
Q  353 catgcatttacgcacgagccggattagtcg 382  Q
    ||||| | |||||| |||||| || |||||    
T  29333201 catgcctctacgcatgagccgaatcagtcg 29333172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 5253386 - 5253222
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||||| | ||||||  ||||||| |||    
T  5253386 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 5253287  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| ||||||||||| ||||  | |||||||| |||| ||||||||| |||||    
T  5253286 gcatgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaaag 5253222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 418
Target Start/End: Original strand, 8938658 - 8938824
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||| ||| || |||||||||||||| ||| |||| ||| ||  |||||||| |||||| |||||||  ||| ||| |||    
T  8938658 aaccaagttgtttgggctccagtgacaaggagctccttccaaagacatatccggggaatacttggttcgattcccaggaggaacaacacttgaccagtgc 8938757  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    ||| |||| |||||| |||||| ||||||||   | ||||| || |||| ||||||||| |||||||    
T  8938758 gcaagcatctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaagaa 8938824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 275 - 416
Target Start/End: Original strand, 12606399 - 12606541
Alignment:
Q  275 tggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccg 373  Q
    ||||||||| ||||||||||  |||||| |||| ||| |    ||||||||||||| | ||||||||||||||| ||||||||| | |||||||||||||    
T  12606399 tggcaatgagctccttccaagaacgtatccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccg 12606498  T
Q  374 gattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||||||  | |||||||| |  | ||||||||| |||||    
T  12606499 gattagtcgcccacctttggtgagctggaaaccggtgcgaaag 12606541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 256 - 416
Target Start/End: Original strand, 3601034 - 3601195
Alignment:
Q  256 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgca 354  Q
    ||||||| ||| |||| |||||||| || ||| ||||||| ||||||||||| ||| | |  |||||||  |||| | ||||||| ||||||| ||||||    
T  3601034 caagttgcttgggctctagtggcaaagagctctttccaaatacgtattcggggaataccggtttcgattctcagggggaacaacgcttggccagtgcgca 3601133  T
Q  355 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||| | ||| ||||||||||||||||||   | |||||||| |||| ||||||||| |||||    
T  3601134 tgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 3601195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 9633708 - 9633624
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||| ||||||| ||||||||| | |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 9633624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 318 - 410
Target Start/End: Original strand, 13391299 - 13391391
Alignment:
Q  318 ttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    |||||||| |||| |||||| ||||||||| ||||||||| | |||||||||||||||||||||||  || |||  || ||||||||||||||    
T  13391299 ttcgattttcaggggaacaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccatatttaatgggtcgaaaaccggtg 13391391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 30788936 - 30788852
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||||||||||| ||||||||| | || ||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  30788936 gaacaacgtttggccagtgcgcatgcctctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 30788852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 256 - 382
Target Start/End: Complemental strand, 13036164 - 13036037
Alignment:
Q  256 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgca 354  Q
    ||||||| ||| ||||||||||||| || |||||||||| |||||||||||| |||   | ||||||||| || || |||||||  ||||||| ||||||    
T  13036164 caagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgca 13036065  T
Q  355 tgcatttacgcacgagccggattagtcg 382  Q
    ||| | |||||| ||||| |||||||||    
T  13036064 tgcctctacgcatgagccagattagtcg 13036037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 382
Target Start/End: Complemental strand, 19230720 - 19230592
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||| |||||||   | || |||||||| || | |||||||| |||| || |  |    
T  19230720 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaataccgga-ttcgattttcaagggaacaacgcttggtcagtatg 19230622  T
Q  353 catgcatttacgcacgagccggattagtcg 382  Q
    ||||| | ||||||||||||||||||||||    
T  19230621 catgcctctacgcacgagccggattagtcg 19230592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 405
Target Start/End: Complemental strand, 29444928 - 29444775
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||  ||| |||| |||||||| || |||||||||||||||||  ||||  || | | |||||||||| ||| | ||||||| ||||||| |||    
T  29444928 aaccaagttacttgggctctagtggcaaggagctccttccaaagacgtacccgggggataccgggttcgatttctagggggaacaacgcttggccagtgc 29444829  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaac 405  Q
    |||||| | |||||| ||||||||||||| |   |||||||||| |||| ||||    
T  29444828 gcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaac 29444775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 8612137 - 8611973
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | ||||| ||||||| ||| ||| ||     
T  8612137 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgt 8612038  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| || |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  8612037 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 8611973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 252 - 416
Target Start/End: Original strand, 19089444 - 19089609
Alignment:
Q  252 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattg 350  Q
    ||||||||||| ||| |||||||| |||| || ||| || ||| ||||||| || | ||| |   ||| |||| ||||| | ||||||  ||||||| ||    
T  19089444 gaaccaagttgcttgggctccagtcgcaaggagctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtg 19089543  T
Q  351 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
     |||||| | ||||||||||||||||||||||  || |||||||| |||| ||||||||| |||||    
T  19089544 agcatgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaag 19089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 5759575 - 5759623
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgta 301  Q
    |||||||||| ||| ||||||||||||| ||||||||||||| ||||||    
T  5759575 aaccaagttgcttgggctccagtggcaaggaactccttccaaggacgta 5759623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 6606260 - 6606096
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||  ||||||||| || |||||||||| ||||||| |||| ||| | | ||||||||  |||| | ||||||  ||||||| ||     
T  6606260 aaccaagttgcttgggccacagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgt 6606161  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
     ||||| | |||||| |||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  6606160 acatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 6606096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 8932608 - 8932772
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| |||| |||||||||||| ||  ||||||||| || |||| |||| |||   | |||||||| ||| || |||||||  ||||| | |||    
T  8932608 aaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgc 8932707  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| ||||||||||| || |  | ||||| || |||| ||||||||| |||||    
T  8932708 gcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaag 8932772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 8944074 - 8944238
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| |||| |||||||||||| ||  ||||||||| || |||| |||| |||   | |||||||| ||| || |||||||  ||||| | |||    
T  8944074 aaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgc 8944173  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| ||||||||||| || |  | ||||| || |||| ||||||||| |||||    
T  8944174 gcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaag 8944238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 416
Target Start/End: Original strand, 5029841 - 5029928
Alignment:
Q  329 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||||||||||| || ||||||||| | |||||| |||  |||||||||||  ||||||| || |||| |||| |||| |||||    
T  5029841 ggagaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaactggtgcgaaag 5029928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 5855466 - 5855596
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||||||| ||| | | |||||||| |||||| |||||||| ||||||| |||    
T  5855466 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 5855565  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | |||||| ||| |||||||||||    
T  5855566 gcatgcctctacgcatgaggcggattagtcg 5855596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 10422732 - 10422896
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||| ||||||||| || |||||||||| |||||||||||| ||| | | |||||||||| |||| |||||||  ||||||| |||    
T  10422732 aaccaagttgtttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgc 10422831  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| |||||||||||||||   | |||||||  |||| ||||||||| |||||    
T  10422832 gcatgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaaag 10422896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 269 - 382
Target Start/End: Complemental strand, 14254416 - 14254302
Alignment:
Q  269 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcac 367  Q
    |||||| ||||| |||||| |||||| |||||||||||| ||| | ||||||||||| |||| | ||||||| ||||||| | ||||||| ||||||||     
T  14254416 ctccaggggcaaggaactcattccaaggacgtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcat 14254317  T
Q  368 gagccggattagtcg 382  Q
    |||||||||||||||    
T  14254316 gagccggattagtcg 14254302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 253 - 406
Target Start/End: Complemental strand, 40288641 - 40288487
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| |||| |||||||| || ||| |||||| |||||||||||| ||| | | |||||||||||| || |||||||| ||||||| |      
T  40288641 aaccaagttgcttgggctcgagtggcaaggagctctttccaaggacgtattcggggaataccgggttcgatttccagggggaacaacggttggccagtat 40288542  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaacc 406  Q
    |||||| | ||| |||||||||||||||||||  ||| |||||| |||| |||||    
T  40288541 gcatgcctctacacacgagccggattagtcgctcatccttggtgggtcggaaacc 40288487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 268 - 416
Target Start/End: Complemental strand, 9659327 - 9659179
Alignment:
Q  268 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 367  Q
    ||||||||||||| || ||| ||| || |||||| ||||| ||| | | |||||||| ||||| |||||||||||| | | ||||||||| ||||||||     
T  9659327 gctccagtggcaaggagctcattctaaggacgtactcggggaataccgggttcgattcccaggggaacaacgtttgactagtgcgcatgcctttacgcat 9659228  T
Q  368 gagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||||||||||   | |||||||| || | ||||||||| |||||    
T  9659227 gagccggattagtcgtccacctttggtgggttggaaaccggtgcgaaag 9659179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 17642168 - 17642004
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||| ||| || |||||||||  ||||||  | |||||| ||| |||||||| ||||| | ||||||  ||||||| |||    
T  17642168 aaccaagttgtttgggctccagtgacaaggagctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgc 17642069  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | ||||||||||||||||||||||   | |||||||| |||| |||| |||| |||||    
T  17642068 gcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaag 17642004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 11398052 - 11397889
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || |||| |||  ||| | | |||||||| | ||| |||||||||||||||| ||||    
T  11398052 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcgattccgaggggaacaacgtttggccaatgcg 11397953  T
Q  353 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
     |||| | |||||| ||| |||||||||||   | |||||||| |||| ||| ||||| |||||    
T  11397952 tatgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaag 11397889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 49078058 - 49078188
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || ||||||| || ||||||| |||| ||| | | |||||||| ||||| | ||||||  ||||||| |||    
T  49078058 aaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgc 49078157  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | |||||| |||||||||||||||    
T  49078158 gcatgcctctacgcatgagccggattagtcg 49078188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 26660082 - 26660245
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| ||  | |||| || |||||||||||| ||| | | |||||||||||| || ||||||| ||||  || | |    
T  26660082 aaccaagttgcttgggctccagtggcaaagagtttcttcgaatgacgtattcggggaataccgggttcgatttccacggggaacaacatttgatcagtac 26660181  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  26660182 gcatgcctctacgcatgagccggattagtcgc-cacctttggtgggtcggaaaccggtgcgaaag 26660245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 257 - 416
Target Start/End: Complemental strand, 32151082 - 32150922
Alignment:
Q  257 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 355  Q
    |||||| ||| ||||||||||||| || |||||||||| ||||| |||| | |||     |||||||||||||| | |||||| ||||| || |||||||    
T  32151082 aagttgtttgggctccagtggcaaggagctccttccaaggacgttttcgaggaatatcaggttcgatttccagggggaacaacatttggtcagtgcgcat 32150983  T
Q  356 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    || |||||||| |||||| |||||||||  | ||||| || ||||||||||| || |||||    
T  32150982 gcctttacgcatgagccgaattagtcgctcacctttgatgggtcgaaaaccgatgcgaaag 32150922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 257 - 416
Target Start/End: Complemental strand, 43959981 - 43959821
Alignment:
Q  257 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 355  Q
    |||||||||| ||||||||||||| |  |||||||||| ||||||  |||| |||   | |||| ||| ||||| | ||||||| ||||||| |||||||    
T  43959981 aagttgattgggctccagtggcaaggtgctccttccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcat 43959882  T
Q  356 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    || | |||||||||||||||||||||||  | |||| |||  ||| ||||||||| |||||    
T  43959881 gcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaag 43959821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 382
Target Start/End: Complemental strand, 2981095 - 2980965
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 351  Q
    |||||||||| ||| |||| |||||||| || |||||||||  ||||||| |||| ||| ||| |||||||| |||| | |||||||  ||||||| ||     
T  2981095 aaccaagttgcttgggctctagtggcaaggagctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgt 2980996  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | |||||||||| |||||||||||    
T  2980995 gcatgcctctacgcacgagtcggattagtcg 2980965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 382
Target Start/End: Complemental strand, 17092641 - 17092511
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgc 351  Q
    |||||||||| |||| ||| ||||||||  | |||||| ||  ||||||||||||||||   ||||||||||| |||| ||| ||||| ||||||| ||     
T  17092641 aaccaagttgcttgaactctagtggcaagaagctcctttcatggacgtattcgggaaatatcgagttcgattttcaggggaaacaacgattggccagtgt 17092542  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    | |||| | ||||||||||||||||||||||    
T  17092541 gtatgcctctacgcacgagccggattagtcg 17092511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 317 - 418
Target Start/End: Complemental strand, 50371934 - 50371832
Alignment:
Q  317 gttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 415  Q
    ||||||||| ||||| |||||||| ||||||| | ||||||| | ||||||| |||||||||||||||  ||||||||||  ||| ||||||||| ||||    
T  50371934 gttcgattttcaggaagaacaacgcttggccagtacgcatgcttctacgcacaagccggattagtcgcccatctttggtggatcggaaaccggtgcgaaa 50371835  T
Q  416 gaa 418  Q
    |||    
T  50371834 gaa 50371832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 260 - 416
Target Start/End: Original strand, 16956417 - 16956574
Alignment:
Q  260 ttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgca 358  Q
    ||||||||||| || |||||| || |||||||||| ||||||  |||| ||| | | ||||| ||  |||| | ||||||||||| ||| |||||||||     
T  16956417 ttgattgagcttcaatggcaaggagctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcc 16956516  T
Q  359 tttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    | ||||||||||||||||||||| |  | |||||||| |||| ||||| ||| |||||    
T  16956517 tctacgcacgagccggattagtcactcacctttggtgggtcggaaaccagtgcgaaag 16956574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 248 - 416
Target Start/End: Original strand, 18915806 - 18915975
Alignment:
Q  248 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggcc 346  Q
    |||| |||||||||| ||| ||| ||||||||| || || ||||||| ||||||  |||| ||| | | |||||||| ||||| | ||||||  ||||||    
T  18915806 atattaaccaagttgtttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggcc 18915905  T
Q  347 attgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    | || |||||| | |||||||||||||||||||||||  | | |||||| || | ||||||||| |||||    
T  18915906 agtgtgcatgcctctacgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaag 18915975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 382
Target Start/End: Complemental strand, 46929901 - 46929772
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| |||| ||||||||  | ||||||||||||||||||  ||  |||   ||||||||||||||  ||||||||| ||||||| ||||    
T  46929901 aaccaagttgcttgggctctagtggcaagaagctccttccaaagacgtatctggagaatatcgagttcgatttccaaaagaacaacgcttggccaatgcg 46929802  T
Q  353 catgcatttacgcacgagccggattagtcg 382  Q
    ||||| |  || || |||||||||||||||    
T  46929801 catgcctccacacatgagccggattagtcg 46929772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 381
Target Start/End: Complemental strand, 48798234 - 48798105
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| | | ||||||||||||| || |||||||||| ||||||| |||| |||   | |||||||||||| || |||||||| ||| | | |||    
T  48798234 aaccaagttgttggggctccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgc 48798135  T
Q  352 gcatgcatttacgcacgagccggattagtc 381  Q
    |||||| | |||||| ||||||||||||||    
T  48798134 gcatgcctctacgcatgagccggattagtc 48798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 8763935 - 8764099
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||| ||||||| || |||||||||| ||||||  |||| |||   | ||||| || ||||| | ||||||  ||||||| |||    
T  8763935 aaccaagttgcttgggctcccgtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgc 8764034  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | ||||||||||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  8764035 gcatgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaaag 8764099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 317 - 409
Target Start/End: Complemental strand, 21849304 - 21849212
Alignment:
Q  317 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 409  Q
    |||||||| ||||| |||||||| ||||| | ||||||||| | |||||||||||||||||||||||  |   |||||| |||||||||||||    
T  21849304 gttcgattcccaggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgctcactattggtgggtcgaaaaccggt 21849212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 33004179 - 33004015
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgc 351  Q
    |||||||||| ||| |||||||||   | || |||||||||| ||||||| |||| |||   |  ||||||||||||| ||| ||| | ||||||| |||    
T  33004179 aaccaagttgcttgggctccagtgatgaggagctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgc 33004080  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | ||||||||||||||||||||| |  | |  ||||| |||||||||||||| |||||    
T  33004079 gcatgcctctacgcacgagccggattagtcacccaccaatggtgggtcgaaaaccggtgcgaaag 33004015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 254 - 416
Target Start/End: Complemental strand, 41664019 - 41663856
Alignment:
Q  254 accaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcg 352  Q
    ||||||||| ||| ||||||||||||| || ||||||| || ||||||| |||| ||| | | |||||||| ||| || |||||||  |||| || ||||    
T  41664019 accaagttgtttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcg 41663920  T
Q  353 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||| | |||||| |||| ||||||||||   | | |||||| |||| ||||||||| |||||    
T  41663919 catgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 41663856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 269 - 382
Target Start/End: Complemental strand, 30927875 - 30927761
Alignment:
Q  269 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcac 367  Q
    |||||||||||| || |||||||||| ||||||   |||||||   | ||||||||||||| | |||||||| ||||||| || |||||| | ||||||     
T  30927875 ctccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcat 30927776  T
Q  368 gagccggattagtcg 382  Q
    |||||||||||||||    
T  30927775 gagccggattagtcg 30927761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 382
Target Start/End: Complemental strand, 33418279 - 33418149
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||||||||||  |||  ||| | |  ||||||| | | || | |||||| ||||||| |||    
T  33418279 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgc 33418180  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | || |||||||||||||||||||    
T  33418179 gcatgcctctatgcacgagccggattagtcg 33418149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 256 - 382
Target Start/End: Complemental strand, 47313059 - 47312933
Alignment:
Q  256 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcat 355  Q
    ||||||| ||| ||||||||||||| ||  ||||||||| |||||||  ||| ||| | | ||| |||| | ||| |||||||||||||||| |||| ||    
T  47313059 caagttgtttgggctccagtggcaacgagatccttccaaggacgtatctggggaataccgggtttgattcctaggggaacaacgtttggccagtgcgtat 47312960  T
Q  356 gcatttacgcacgagccggattagtcg 382  Q
    || | |||||| ||||| |||||||||    
T  47312959 gcctctacgcatgagccagattagtcg 47312933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 256 - 418
Target Start/End: Original strand, 2567223 - 2567386
Alignment:
Q  256 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcga-tttccaggagaacaacgtttggccattgcgca 354  Q
    ||||||| ||| ||| || |||||| || |||||||||| |||||||||||  ||| | | |||||| ||||  ||| ||||||| ||||||| ||||||    
T  2567223 caagttgtttgggcttcactggcaaggagctccttccaaggacgtattcggagaataccgggttcgattttcggggaaaacaacgcttggccagtgcgca 2567322  T
Q  355 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    ||| | ||| |||||| | |||||| ||   |||||||||| |||| ||||||||  |||||||    
T  2567323 tgcctctactcacgagtcagattagccgtccatctttggtgggtcggaaaccggtacgaaagaa 2567386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 15465909 - 15466064
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||| ||| |  |||||||||| |||||||| ||| ||| |   |||||||||||| || |||||||| |||| || |||    
T  15465909 aaccaagttgtttgggctccagtgacaaagggctccttccaaggacgtatttggggaataccaggttcgatttccagggggaacaacgcttggtcagtgc 15466008  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccg 407  Q
     ||||| | |||||||||| | |||| |||||  | |||||||| |||| ||||||    
T  15466009 acatgcctctacgcacgagtctgattggtcgctcacctttggtgggtcggaaaccg 15466064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 317 - 416
Target Start/End: Original strand, 44969673 - 44969772
Alignment:
Q  317 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||||  ||||||||||||| ||||||| || ||||||   |||||| |||||||||||||||   ||| ||||||  ||| |||||||||||||||    
T  44969673 gttcgattctcaggagaacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtggatcggaaaccggtgtgaaag 44969772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 334 - 416
Target Start/End: Original strand, 37339846 - 37339928
Alignment:
Q  334 acaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| ||||||| ||||||||| |  ||||||||||||||||||||||  | |||||||| || | ||||||||| |||||    
T  37339846 acaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaag 37339928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 416
Target Start/End: Complemental strand, 10173056 - 10172971
Alignment:
Q  331 agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||||| ||||||| ||| ||||| | |||||| ||||||||||| ||||  | |||||||| |||| ||||||||| |||||    
T  10173056 agaacaacgcttggccagtgcccatgcctctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaag 10172971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 270 - 378
Target Start/End: Original strand, 10336477 - 10336586
Alignment:
Q  270 tccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgcacg 368  Q
    ||||||||||| || |||||||||||||||||| |||  |||   | ||||||||| || || |||||||| ||| ||| ||||||||| | |||||| |    
T  10336477 tccagtggcaaggagctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatg 10336576  T
Q  369 agccggatta 378  Q
    ||||||||||    
T  10336577 agccggatta 10336586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 26325756 - 26325920
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 351  Q
    |||||||||| | | ||||||||||||| || |||||| ||| ||||||| || | |||   | |||||||| |||| | |||||||  |||| || |||    
T  26325756 aaccaagttgctagggctccagtggcaaggagctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgc 26325855  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| |||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  26325856 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 26325920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 4581757 - 4581682
Alignment:
Q  341 ttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||| ||||||||| | ||||||||||||||| ||||||   | |||||||| |||| ||||||||| |||||    
T  4581757 ttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaag 4581682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 13262091 - 13262157
Alignment:
Q  317 gttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 382  Q
    |||||||||||||| |||||||||||||| || | ||||||  | |||||||||| |||||||||||    
T  13262091 gttcgatttccagggagaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcg 13262157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 418
Target Start/End: Original strand, 14357703 - 14357865
Alignment:
Q  257 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcat 355  Q
    |||||| ||||||||||||||||| ||  | ||||||| |||||||  || ||||     ||||||||||||   ||| ||||||||| ||| |||||||    
T  14357703 aagttgcttgagctccagtggcaaggagtttcttccaaggacgtatctggaaaatatcaggttcgatttccaattgaaacaacgtttgaccagtgcgcat 14357802  T
Q  356 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    || | ||||||||| |||||||| |||  || | ||| || |||| ||||||||| |||||||    
T  14357803 gcctctacgcacgaaccggattaatcgtttaccattgatgggtcggaaaccggtgcgaaagaa 14357865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 377
Target Start/End: Original strand, 34877934 - 34878059
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||| ||||||||| || | |||||||| |||||||||||| ||| |   |||||||| | |||  |||||||  ||||||| |||    
T  34877934 aaccaagttgtttgggcttcagtggcaaggagcaccttccaaggacgtattcggggaataccaggttcgattcctaggcggaacaacacttggccagtgc 34878033  T
Q  352 gcatgcatttacgcacgagccggatt 377  Q
    |||||| | ||| |||||||| ||||    
T  34878034 gcatgcctctacacacgagccagatt 34878059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 272 - 416
Target Start/End: Complemental strand, 45362027 - 45361882
Alignment:
Q  272 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgag 370  Q
    ||||||||| || |||||||||| ||||||  | || ||| | | ||||||||  |||||| ||||||| ||||||| |||||||||   ||||||  ||    
T  45362027 cagtggcaaggagctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgcataag 45361928  T
Q  371 ccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  45361927 ccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 45361882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 248 - 379
Target Start/End: Complemental strand, 4195370 - 4195238
Alignment:
Q  248 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggcc 346  Q
    |||| |||||||||| ||| ||||||||||||| || ||||| |||| ||||||| |||| ||| | ||||||||||||||||| ||||||| ||||||     
T  4195370 atatcaaccaagttgcttgggctccagtggcaaggagctcctgccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggct 4195271  T
Q  347 attgcgcatgcatttacgcacgagccggattag 379  Q
    | ||||||||| | |||||| ||||||||||||    
T  4195270 agtgcgcatgcctctacgcatgagccggattag 4195238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 255 - 416
Target Start/End: Original strand, 34659174 - 34659336
Alignment:
Q  255 ccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgcgc 353  Q
    |||||||| ||| ||||||||||||| || |||||||||  || |||  |||| ||| | | |||||||| || ||| |||||||| ||| ||| |||||    
T  34659174 ccaagttgtttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgc 34659273  T
Q  354 atgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||| | |||||||||||||||||||||||  | | ||||||||||||||||||||| |||||    
T  34659274 atgcctctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaaag 34659336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 48804629 - 48804793
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| || ||| |||||||  ||||||| |||    
T  48804629 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgc 48804728  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| |||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  48804729 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 48804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 253 - 410
Target Start/End: Complemental strand, 5039581 - 5039423
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || ||||||||| ||| ||||||||| ||| | |||||||||| | |||| |||||||  |||| || |||    
T  5039581 aaccaagttgtttgggctccagtggcaaggagctccttccatagatgtattcggggaataccgagttcgattcctaggaggaacaacacttggtcagtgc 5039482  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
     ||| | | |||||| ||||||||||||||||  | ||||||||  |||||||||||||    
T  5039481 acatacctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtg 5039423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 43346942 - 43346778
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 351  Q
    |||||||||| |||  |||||||||||| || ||||||||||||||||||  ||| ||| | | |||| ||| || ||| |||||||  ||||||  |||    
T  43346942 aaccaagttgtttggactccagtggcaaggagctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgc 43346843  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||| ||||||||||||||||||  |||||||||| |||| ||||| ||| |||||    
T  43346842 gcatgcctctacgtacgagccggattagtcgctcatctttggtgggtcggaaaccagtgcgaaag 43346778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 43862135 - 43861971
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| |||| || ||||| || ||| ||||||||||||||  ||| ||| | | |||||||| ||||| | ||||||||||||||| |||    
T  43862135 aaccaagttgtttgggctctagcggcaaggagctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgc 43862036  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| ||||||||||||||    | ||||||||  ||||||||||||| |||||    
T  43862035 gcatgcctctacgcatgagccggattagtcattcacctttggtggatcgaaaaccggtgcgaaag 43861971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 256 - 410
Target Start/End: Original strand, 1797409 - 1797564
Alignment:
Q  256 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgca 354  Q
    ||||||| ||| ||||||||||||| || |||||||||| ||||||| || | ||| | | |||||||| ||||| ||| ||||| ||||||| ||||||    
T  1797409 caagttgcttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgca 1797508  T
Q  355 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    ||  | ||||||||||||||| ||||||   ||||||| ||  |||||||||||||    
T  1797509 tgtctctacgcacgagccggactagtcgtccatctttgatggatcgaaaaccggtg 1797564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 410
Target Start/End: Original strand, 16802069 - 16802227
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    ||||||||||  || |||||||||||||||| |||||||||| ||||||  |||| ||| | |  |||||||   ||||| ||||||| ||||||| |||    
T  16802069 aaccaagttgcctgggctccagtggcaatgagctccttccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgc 16802168  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    | |||| | |||||||||||||||||||||||  | | |||||| ||||||||| ||||    
T  16802169 gtatgcctctacgcacgagccggattagtcgctcaccattggtgggtcgaaaactggtg 16802227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 382
Target Start/End: Complemental strand, 17748545 - 17748415
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| |||| ||||||||  | || ||||||| |||||||||||| ||| | | |||||||| ||||| | ||||||| ||||||| |||    
T  17748545 aaccaagttgtttgggctctagtggcaagcagcttcttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgc 17748446  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | |||| |||||||||||||||||    
T  17748445 gcatgcctctacgtacgagccggattagtcg 17748415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 256 - 416
Target Start/End: Complemental strand, 5069975 - 5069814
Alignment:
Q  256 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgcgca 354  Q
    ||||||| ||| ||||||||||||| || || |||| || ||||||  |||||||| | | ||||||||||||||| |||||||| || || | || |||    
T  5069975 caagttgtttgggctccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgca 5069876  T
Q  355 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||| | ||||||| |||||||||||||||  | |||||||| |||| |||||| || |||||    
T  5069875 tgcctctacgcacaagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 5069814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 22993530 - 22993366
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| |||   | |||||||| | ||||| ||||||| ||||||| ||     
T  22993530 aaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgt 22993431  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | ||||||||| |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  22993430 gcatgcctctacgcacgaaccggattagtcgctcacctttggtgggtcagaaaccggtgcgaaag 22993366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 383
Target Start/End: Complemental strand, 4228914 - 4228786
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| ||||||| ||||| || |||||||||| ||||||| || | ||| |   |||||||||||||||  |||||||||||||| |||     
T  4228914 aaccaagttgtttgggctccagcggcaaggagctccttccaaggacgtatccgaggaataccaggttcgatttccagga--acaacgtttggccagtgca 4228817  T
Q  353 catgcatttacgcacgagccggattagtcgc 383  Q
    |||||   |||||| ||||||||||||||||    
T  4228816 catgcccctacgcatgagccggattagtcgc 4228786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 410
Target Start/End: Original strand, 13095804 - 13095962
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||| ||||||| || |||||| ||| ||||||  |||| ||| | | |||| ||| ||||| | ||||||  ||||||| |||    
T  13095804 aaccaagttgcttgggctcccgtggcaaggagctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgc 13095903  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| |||| |||||||||    
T  13095904 gcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtg 13095962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 332 - 418
Target Start/End: Complemental strand, 38578950 - 38578864
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    |||||||| ||||||| ||||||||| | |||||| ||||||||||||||||  | |||||||| |||| ||||||||| |||||||    
T  38578950 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagaa 38578864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 47341822 - 47341952
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || ||| |||||| ||||||  |||| ||| | |||||||||| ||| || |||||||  ||||||| |||    
T  47341822 aaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgc 47341921  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | ||||||||||| ||||| ||||    
T  47341922 gcatgcctctacgcacgagcaggattggtcg 47341952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 418
Target Start/End: Original strand, 22573759 - 22573924
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| |||||||| ||||  | || ||||||||||  |||| ||| |||   | ||||||||| |||| ||||||| |||| ||| ||||    
T  22573759 aaccaagttgcttgggctccagtagcaagaagcttcttccaaagatatattgggggaatatcgggttcgattttcaggggaacaacatttgaccagtgcg 22573858  T
Q  353 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    ||||| |||||||| ||||||||||| |||   ||| ||| || || ||||||||||| |||||||    
T  22573859 catgcctttacgcatgagccggattaatcgtccatcattgatgggttgaaaaccggtgcgaaagaa 22573924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 10048039 - 10047875
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  10048039 aaccaagttgcttgaactccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 10047940  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||| || | |||||| |||| | ||||||||   | | |||||| |||| ||||||||| |||||    
T  10047939 gcaggcctctacgcatgagcagaattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 10047875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 269 - 378
Target Start/End: Complemental strand, 42210409 - 42210299
Alignment:
Q  269 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcac 367  Q
    |||||||||||| || ||| |||||| ||||||| || | ||| | |  ||||||| |||| || ||||||||||||||| ||||||||| | |||||||    
T  42210409 ctccagtggcaaggagctctttccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcatgcctctacgcac 42210310  T
Q  368 gagccggatta 378  Q
    |||||||||||    
T  42210309 gagccggatta 42210299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 380
Target Start/End: Original strand, 43925458 - 43925586
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||| || |||||||  |||| || |||    
T  43925458 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgc 43925557  T
Q  352 gcatgcatttacgcacgagccggattagt 380  Q
    |||||| | |||||| |||| ||||||||    
T  43925558 gcatgcctctacgcatgagctggattagt 43925586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 11607080 - 11607131
Alignment:
Q  256 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcggg 307  Q
    ||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||    
T  11607080 caagttgcttgggctccagtggcaaggaactccttccaaggacgtattcggg 11607131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 27028289 - 27028392
Alignment:
Q  317 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 415  Q
    |||||||||||||| | ||||||  ||||||| ||||||||| | ||| || |||| |||||||||||  | |||||||| |||| ||||||||| ||||    
T  27028289 gttcgatttccagggggaacaacacttggccagtgcgcatgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 27028388  T
Q  416 gaag 419  Q
    ||||    
T  27028389 gaag 27028392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 45853664 - 45853586
Alignment:
Q  272 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccatt 349  Q
    ||||||||| ||||||||||||| |||||||| ||  ||||| ||||||||||||||| |  ||||||| |||||||||    
T  45853664 cagtggcaaggaactccttccaaggacgtatttggagaatgccgagttcgatttccagtggaaacaacgattggccatt 45853586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 333 - 382
Target Start/End: Original strand, 3353451 - 3353500
Alignment:
Q  333 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| |||||||| ||||||||| | ||||||||||||||||||||||    
T  3353451 aacaacatttggccagtgcgcatgcctctacgcacgagccggattagtcg 3353500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 409
Target Start/End: Original strand, 21530694 - 21530851
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||  ||||||||||||| || |||||||||| ||||||   ||| ||| ||| ||| |||| ||| || |||||||  |||| || |||    
T  21530694 aaccaagttgcttcggctccagtggcaaggagctccttccaaggacgtacctggggaatactgggtttgattcccagggggaacaacacttggtcagtgc 21530793  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 409  Q
     ||||| | ||||||||||||| |||| ||||  | |||||||| |||| ||||||||    
T  21530794 acatgcctctacgcacgagccgaattaatcgctcacctttggtgggtcggaaaccggt 21530851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 4706067 - 4705983
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||||||| |||||| ||||||| | ||||||||||| ||||||||||   | |||||||   |||||||||| ||||||||    
T  4706067 gaacaacgtttagccattacgcatgcttctacgcacgagctggattagtcgtccacctttggtagatcgaaaaccgatgtgaaag 4705983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 268 - 383
Target Start/End: Original strand, 14535252 - 14535368
Alignment:
Q  268 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgca 366  Q
    |||||| |||||| ||||||||||||| |||||| || || ||| | | |||  |||| || ||||||||||  ||||||| || |||||| | ||||||    
T  14535252 gctccaatggcaaagaactccttccaaggacgtactccgggaataccgggtttcattttcagggagaacaacacttggccagtgtgcatgcctctacgca 14535351  T
Q  367 cgagccggattagtcgc 383  Q
    ||||| |||||||||||    
T  14535352 cgagctggattagtcgc 14535368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 285 - 416
Target Start/End: Complemental strand, 21190911 - 21190779
Alignment:
Q  285 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 383  Q
    |||||||||| ||| ||| |||| ||| | | |||||||| | ||||| | ||||| ||||| | ||||||||| | |||||||||| | ||||||||||    
T  21190911 ctccttccaaggacttatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgcacgagtcagattagtcgc 21190812  T
Q  384 atatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
      |||  ||||| |||||||||||||| |||||    
T  21190811 ccatcaatggtgggtcgaaaaccggtgcgaaag 21190779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 356
Target Start/End: Complemental strand, 22268192 - 22268088
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || ||| |||||| |||||| | ||| ||| | | |||||||| ||| || ||||||| |||||||| |||    
T  22268192 aaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacttggggaataccgggttcgattcccagggggaacaacatttggccagtgc 22268093  T
Q  352 gcatg 356  Q
    |||||    
T  22268092 gcatg 22268088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 395
Target Start/End: Original strand, 23658188 - 23658268
Alignment:
Q  316 agttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtg 395  Q
    ||||||||||||||| | ||||||| ||||||| || |||||| | ||| ||||||||||||||||||   ||||||||||    
T  23658188 agttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttggtg 23658268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 28396226 - 28396166
Alignment:
Q  349 tgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 409  Q
    ||||||||| |||||||| |||||||||||||||  || |||||||| |||| ||||||||    
T  28396226 tgcgcatgcctttacgcatgagccggattagtcgtctacctttggtgggtcggaaaccggt 28396166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 273 - 416
Target Start/End: Complemental strand, 36619397 - 36619253
Alignment:
Q  273 agtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagc 371  Q
    |||||||| ||||||||| ||| |||||||| ||| ||| | | |||||||| ||||| | ||||||  ||| ||| || |||||| | |||||| ||||    
T  36619397 agtggcaaggaactccttgcaaggacgtatttggggaataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagc 36619298  T
Q  372 cggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||||||   | | |||||| ||| |||||| |||||||||    
T  36619297 cggattagtcgtccaccattggtgggtcaaaaaccagtgtgaaag 36619253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 285 - 416
Target Start/End: Original strand, 37514899 - 37515031
Alignment:
Q  285 ctccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 383  Q
    |||||||||| ||| ||  |||| ||| ||| ||||||||| ||| | ||||||||||||| || ||||||||  | |||||||||||||||||| |||     
T  37514899 ctccttccaaggacatacccggggaatactgggttcgattttcagtgggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggattaatcgt 37514998  T
Q  384 atatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
      | | || ||| |||| |||||||||||||||    
T  37514999 tcaccattagtgggtcggaaaccggtgtgaaag 37515031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 41945503 - 41945583
Alignment:
Q  336 aacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||| ||||||| ||||||||| | ||||||||||||||||||||||   | |||||||| |||| ||| ||||| |||||    
T  41945503 aacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaag 41945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 383
Target Start/End: Complemental strand, 45960165 - 45960035
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 351  Q
    |||||||||| |||||||||||| |||| || ||| |||||| |||||| ||||| ||| | ||||| |||| || |||  ||||||  |||| || |||    
T  45960165 aaccaagttgtttgagctccagtagcaaggagctctttccaaggacgta-tcggggaataccgagtttgattcccaagggcaacaacacttggtcagtgc 45960067  T
Q  352 gcatgcatttacgcacgagccggattagtcgc 383  Q
    |||||| | ||||||  |||||||||||||||    
T  45960066 gcatgcctctacgcataagccggattagtcgc 45960035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 30827302 - 30827368
Alignment:
Q  317 gttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 382  Q
    ||||||||| |||| ||||||||  ||||||| | ||||||| | ||||||||||||||||||||||    
T  30827302 gttcgattttcagggagaacaacacttggccagtacgcatgcctctacgcacgagccggattagtcg 30827368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 34127698 - 34127644
Alignment:
Q  362 acgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||||||||||||||||||  | |||||||| ||| |||||||||| |||||    
T  34127698 acgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggtgcgaaag 34127644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 252 - 380
Target Start/End: Original strand, 42032041 - 42032170
Alignment:
Q  252 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattg 350  Q
    |||| |||||| ||| |||||||| ||||  | |||||||||| ||||||  |||| ||| |   |||||||| ||| || |||||||||||||||| ||    
T  42032041 gaactaagttgtttgggctccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtg 42032140  T
Q  351 cgcatgcatttacgcacgagccggattagt 380  Q
    | ||| ||| |||||| |||||| ||||||    
T  42032141 cacatacatctacgcatgagccgaattagt 42032170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 13893869 - 13894033
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||| | |||| ||| | | ||| |||||||||| | ||||||| |||| || |||    
T  13893869 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtgtccggggaataccgggttggatttccagggggaacaacgcttggtcaatgc 13893968  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | ||| |||||||||||||||||||  | ||||||||  ||||||||||||| |||||    
T  13893969 gcatgcctctacacacgagccggattagtcgcccacctttggtggatcgaaaaccggtgcgaaag 13894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 7328787 - 7328950
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| |||| |||||||| ||  ||||||||| ||||||  |||||||| | | |||||||| ||||| | ||||||  ||||||| |||    
T  7328787 aaccaagttgcttgtgctctagtggcaaggagttccttccaaggacgtacccgggaaataccgggttcgattcccagggggaacaacacttggccagtgc 7328886  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| || ||||| ||||||||||||||||  | |||||||| |||||||||||||| |||||    
T  7328887 gcatgcctt-acgcatgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcgaaag 7328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 15320129 - 15320293
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||||| ||||| ||||| | ||||||| ||     
T  15320129 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgt 15320228  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||||||||||||||||||||  | |||||||| |||  ||||||||| |||||    
T  15320229 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 15320293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 33251605 - 33251735
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||| |||||||||| |||||||||| |||||||| ||| ||| | | |||||||| || | | |||||||||||||||| ||     
T  33251605 aaccaagttgtttgggctccggtggcaatgagctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgt 33251704  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | |||||| |||||||||||||||    
T  33251705 gcatgcctctacgcatgagccggattagtcg 33251735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 29127862 - 29128026
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| ||  ||||||||| |||||||  ||| |||   | |||||||||||||| ||||||||  |||| || |||    
T  29127862 aaccaagttgtttgggctccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgc 29127961  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| |||| |||||| || |||||    
T  29127962 gcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 29128026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 54261169 - 54261333
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||   ||| ||| | | |||||||| | ||||| ||||||| ||||||| |||    
T  54261169 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgc 54261268  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| |||||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  54261269 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 54261333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 45877397 - 45877527
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || | |||||||| ||||||| |||| ||| | | |||||||||||||| | ||||||  ||||||| |||    
T  45877397 aaccaagttgtttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgc 45877496  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
     ||||| | |||||| |||||||||||||||    
T  45877497 acatgcctctacgcatgagccggattagtcg 45877527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 410
Target Start/End: Complemental strand, 55069843 - 55069685
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||| |||||| ||| || ||| ||||||||| || ||| ||| ||| |||| | |  | |||||||||||||||| |||    
T  55069843 aaccaagttgtttgggctccagtgacaatgagctcttttcaaggacgtattcagggaatactgggtttgattcctatagggaacaacgtttggccagtgc 55069744  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
     ||||| | |||||||||||||||||| ||||  | |||||||| |||| |||||||||    
T  55069743 acatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtg 55069685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 26362051 - 26361967
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||||||||| || || |||||| | |||||||||||||||||||||||| | ||||| || |||| |||||||||||||||    
T  26362051 gaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaag 26361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 257 - 416
Target Start/End: Complemental strand, 28572371 - 28572211
Alignment:
Q  257 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcat 355  Q
    |||||| ||| ||||||||||||| || |||||| |||  ||| |  |||| ||| ||| |||||||| ||||| ||| ||||| ||||||| |  ||||    
T  28572371 aagttgcttgtgctccagtggcaaggagctcctttcaagaacgcacccggggaatactgggttcgattcccaggggaaacaacgcttggccagtatgcat 28572272  T
Q  356 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    || | |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  28572271 gcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 28572211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 256 - 382
Target Start/End: Original strand, 6462358 - 6462485
Alignment:
Q  256 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgca 354  Q
    ||||||| ||| |||| |||||||| || |||||||||| |||||||  ||| ||| | | ||||||||  |||| ||||||||| ||||||| ||||||    
T  6462358 caagttgcttgggctctagtggcaaggagctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgca 6462457  T
Q  355 tgcatttacgcacgagccggattagtcg 382  Q
    ||| | |||||| |||||||||||||||    
T  6462458 tgcctctacgcatgagccggattagtcg 6462485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 383
Target Start/End: Original strand, 10855327 - 10855458
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || ||| | ||||||| | | ||| |||||||| || |||||||| ||||||| | |    
T  10855327 aaccaagttgtttgggctccagtggcaaggagctccttccaaggatgtacttgggaaataccgggtttgatttccagggggaacaacgcttggccagtac 10855426  T
Q  352 gcatgcatttacgcacgagccggattagtcgc 383  Q
    |||||| | ||||||||| ||| |||||||||    
T  10855427 gcatgcctctacgcacgaaccgaattagtcgc 10855458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 275 - 410
Target Start/End: Complemental strand, 15795635 - 15795500
Alignment:
Q  275 tggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccgg 374  Q
    |||| |||| |||||||||| ||||||  |||| ||| | |||||||||| ||||| |||||||| |||| || ||||||||| | ||||||||||| |     
T  15795635 tggcgatgagctccttccaaggacgtacccggggaataccgagttcgattcccaggggaacaacgcttggtcagtgcgcatgcctctacgcacgagctga 15795536  T
Q  375 attagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    |||||||||  | |  ||||| ||||||||||||||    
T  15795535 attagtcgcccaccaatggtgggtcgaaaaccggtg 15795500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 47749268 - 47749105
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||| ||| ||| |||||||||| ||||| || ||||||| ||||||| | || ||| | | |||||||| | ||| |||||||  ||||||| ||||    
T  47749268 aaccaaattgtttgggctccagtggtaatgagcttcttccaaggacgtatccagggaataccgggttcgattcctaggggaacaactcttggccagtgcg 47749169  T
Q  353 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||| | ||||||||||||| |||||||||  | |||||||  |||| |||||| || |||||    
T  47749168 catgcctctacgcacgagccgaattagtcgcccacctttggtaggtcggaaaccgatgcgaaag 47749105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 383
Target Start/End: Complemental strand, 51683118 - 51682987
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||| | || |||||||||||||||||| |||| ||| |   |||||||| ||| || |||||||| ||| ||| |||    
T  51683118 aaccaagttgtttgggctccagtggcgaggagctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgc 51683019  T
Q  352 gcatgcatttacgcacgagccggattagtcgc 383  Q
    |||||| | | | |||||||||||||||||||    
T  51683018 gcatgcctctccacacgagccggattagtcgc 51682987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 3755513 - 3755643
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| |||  |||||||||||| || ||| || ||| ||||||| |||| ||| | || ||||||| ||||||| ||||||||||| ||| |||    
T  3755513 aaccaagttgcttggactccagtggcaaagagctcttttcaaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgc 3755612  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||  | |||||| |||||||||||||||    
T  3755613 gcatgtctctacgcatgagccggattagtcg 3755643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 375
Target Start/End: Original strand, 10040500 - 10040622
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| ||||||||||||| || ||||||| || ||||||  |||| |||   | ||||||||  |||| |||||||| ||||||| ||||    
T  10040500 aaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtacccggggaatatcgggttcgattctcaggggaacaacgcttggccagtgcg 10040599  T
Q  353 catgcatttacgcacgagccgga 375  Q
    ||||| | |||||||||||||||    
T  10040600 catgcctctacgcacgagccgga 10040622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 383
Target Start/End: Original strand, 39849015 - 39849145
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||| | ||| ||||||||||||| || |||||||||| |||||| || || |||   | |||||||| ||||  |||||||| ||||||| || |    
T  39849015 aaccaagtcgcttgggctccagtggcaaggagctccttccaaggacgtactcagggaatttcgggttcgattcccagaggaacaacgcttggccagtgtg 39849114  T
Q  353 catgcatttacgcacgagccggattagtcgc 383  Q
    ||||| | |||||| ||||||||||||||||    
T  39849115 catgcctctacgcatgagccggattagtcgc 39849145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 7310867 - 7310703
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 351  Q
    |||||||||||||| ||||| |||||||||| ||||||||||  |||||   | | ||| | | |||||||| |||| | |||||||  ||| ||  ||     
T  7310867 aaccaagttgattgggctccggtggcaatgagctccttccaagaacgtacctgaggaataccgggttcgattcccagtgggaacaacacttgcccggtgt 7310768  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||||||||||||||||||||  |||||||||| |||| |||||| || |||||    
T  7310767 gcatgcctctacgcacgagccggattagtcgctcatctttggtgggtcggaaaccgatgcgaaag 7310703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 332 - 415
Target Start/End: Complemental strand, 3507617 - 3507534
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 415  Q
    |||||||  ||||||| ||||||||| | |||||||||||||||||||||||  | |||||||| |||| ||||||||| ||||    
T  3507617 gaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 3507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 383
Target Start/End: Complemental strand, 42412938 - 42412807
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||| |||| ||| | | |||||||| || || | ||||||| ||||| | |||    
T  42412938 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgc 42412839  T
Q  352 gcatgcatttacgcacgagccggattagtcgc 383  Q
     ||||| | |||||| ||||||||||||||||    
T  42412838 ccatgcctctacgcatgagccggattagtcgc 42412807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 382
Target Start/End: Complemental strand, 26207965 - 26207835
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || |||  |||| ||| | | |||||||| ||| || |||||||| ||| ||| ||     
T  26207965 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgt 26207866  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | |||||| |||||||||||||||    
T  26207865 gcatgcctctacgcatgagccggattagtcg 26207835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 381
Target Start/End: Original strand, 29135856 - 29135985
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||| ||| ||| ||||||||||||| || || ||||||| ||||||| |||| ||| | |  ||||||| ||||| | ||||||  ||||||| |||    
T  29135856 aaccaaattgcttgggctccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgc 29135955  T
Q  352 gcatgcatttacgcacgagccggattagtc 381  Q
    |||||| | |||||| ||||||||||||||    
T  29135956 gcatgcctctacgcatgagccggattagtc 29135985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 8164576 - 8164660
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||| ||||||| ||||||||| |||||||||||| ||||||||||||  | ||||||||  ||| ||| ||| |||||||    
T  8164576 gaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtggatcggaaatcggcgtgaaag 8164660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 384
Target Start/End: Original strand, 28242221 - 28242353
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||||||||| |||| || || |||||||||| ||||||| |||  ||| | | ||| |||| ||||||| ||||| ||||||||| |||    
T  28242221 aaccaagttgcttgagctccggtggtaaagagctccttccaatgacgtatccggagaataccgggttagattgccaggaggaacaatgtttggccagtgc 28242320  T
Q  352 gcatgcatttacgcacgagccggattagtcgca 384  Q
     ||||| | || ||| ||| |||||||||||||    
T  28242321 acatgcctctatgcatgaggcggattagtcgca 28242353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 41630676 - 41630512
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||| ||| || |||||||||  ||||||  ||| |||| | | |||| ||| ||| || |||||||| ||| ||| |||    
T  41630676 aaccaagttgtttgggctccagtgacaaggagctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagtgc 41630577  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | ||| || ||||||||||||||||  | |||||||  |||| |||| ||||||||||    
T  41630576 gcatgcctctacacatgagccggattagtcgcccacctttggttggtcggaaactggtgtgaaag 41630512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 258 - 369
Target Start/End: Original strand, 49082772 - 49082884
Alignment:
Q  258 agttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatg 356  Q
    ||||| ||| ||||||||||||  || ||||||| || ||||||| |||| ||| | |||||||||| ||| ||||||||||| || |||| ||||||||    
T  49082772 agttgtttgggctccagtggcagggagctccttctaaggacgtatccggggaataccgagttcgattcccagggagaacaacgcttagccagtgcgcatg 49082871  T
Q  357 catttacgcacga 369  Q
    ||| ||| |||||    
T  49082872 catctacacacga 49082884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 253 - 419
Target Start/End: Complemental strand, 29762319 - 29762152
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || ||||||||| |||   | || |||||  |||| | ||||||  ||||||| |||    
T  29762319 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgc 29762220  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaag 419  Q
    |||||| | || ||| |||| ||||||||||   | | |||||| |||| ||||||||| ||||||||    
T  29762219 gcatgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagaag 29762152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 361 - 416
Target Start/End: Original strand, 47164158 - 47164213
Alignment:
Q  361 tacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||||||||||||||||||  ||||||||||  ||| |||||||||||||||    
T  47164158 tacgcacgagccggattagtcgctcatctttggtggatcggaaaccggtgtgaaag 47164213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 25294903 - 25295033
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | ||| |||| ||  ||  ||||||  ||||||| |||    
T  25294903 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgc 25295002  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | || ||| |||||||||||||||    
T  25295003 gcatgcctctatgcatgagccggattagtcg 25295033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 354
Target Start/End: Original strand, 50682420 - 50682522
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| |||||||| ||||||||  | ||||||| || ||||||||||| ||||   | |||||||||| | ||||||||||| ||||||| |||    
T  50682420 aaccaagttgtttgagctctagtggcaagaagctccttcgaatgacgtattcggaaaatatagggttcgatttctagggagaacaacgcttggccagtgc 50682519  T
Q  352 gca 354  Q
    |||    
T  50682520 gca 50682522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 405
Target Start/End: Complemental strand, 30767347 - 30767258
Alignment:
Q  317 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaac 405  Q
    |||||||||||||| | ||||||  ||||||| || |||||| | |||||||||||||||||||||||  | |||||||| |||| ||||    
T  30767347 gttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaac 30767258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 378
Target Start/End: Original strand, 41219537 - 41219661
Alignment:
Q  254 accaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcg 352  Q
    ||||||||| ||| ||||| || ||||||| ||||||| || ||||||| |||||| | |  |||||||||  |||||| ||||||||||||||| ||||    
T  41219537 accaagttgcttgggctcccgttgcaatgagctccttctaaggacgtatacgggaa-taccaagttcgattctcaggaggaacaacgtttggccagtgcg 41219635  T
Q  353 catgcatttacgcacgagccggatta 378  Q
     |||| | | ||||||||| ||||||    
T  41219636 tatgcctctgcgcacgagctggatta 41219661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 26043819 - 26043911
Alignment:
Q  317 gttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccgg 408  Q
    |||||||| ||||| ||||||||  ||||||| ||||||||| | |||||| ||||||||||||||||  | |||||||| |||  |||||||    
T  26043819 gttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgagtcagaaaccgg 26043911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 43330799 - 43330739
Alignment:
Q  349 tgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 409  Q
    ||||||||| | |||||||||||||||||||||||  | |||||||| ||| |||||||||    
T  43330799 tgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggt 43330739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 332 - 383
Target Start/End: Original strand, 7648763 - 7648814
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 383  Q
    |||||||||||| ||| ||||||| | | |||||||||||||||||||||||    
T  7648763 gaacaacgtttgaccagtgcgcatacctctacgcacgagccggattagtcgc 7648814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 416
Target Start/End: Complemental strand, 36043729 - 36043674
Alignment:
Q  361 tacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  36043729 tacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 36043674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 406
Target Start/End: Complemental strand, 22405703 - 22405553
Alignment:
Q  257 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 355  Q
    |||||| ||| ||||||||||||| || ||||| |||| ||||||| || ||||| | |  ||| |||  |||||| ||||||| ||  ||| |||| ||    
T  22405703 aagttgtttgggctccagtggcaaggagctcctaccaatgacgtatccgtgaaataccggattctattctcaggaggaacaacgcttaaccaatgcgaat 22405604  T
Q  356 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaacc 406  Q
    || |||| ||||||||||||||| |||   |||||||||| |||| |||||    
T  22405603 gcctttatgcacgagccggattaatcgtccatctttggtgcgtcggaaacc 22405553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 34460597 - 34460547
Alignment:
Q  329 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattag 379  Q
    ||||||||||||||||||| || |||||| |  ||||||||||||||||||    
T  34460597 ggagaacaacgtttggccagtgtgcatgcctccacgcacgagccggattag 34460547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 332 - 410
Target Start/End: Complemental strand, 35923707 - 35923629
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    |||||||||||||||| ||||||||| | || ||||||| || ||||||||   ||||||| ||  |||||||||||||    
T  35923707 gaacaacgtttggccagtgcgcatgcctctaagcacgagtcgaattagtcgtccatctttgatggatcgaaaaccggtg 35923629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 49198294 - 49198424
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||| ||| ||  | ||||||| ||| ||| |||| ||| | | |||||||| | ||| | ||||||  ||||||| |||    
T  49198294 aaccaagttgtttgggctccagtgacaaggagtttcttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgc 49198393  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | |||||| |||||||||||||||    
T  49198394 gcatgcctctacgcatgagccggattagtcg 49198424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 285 - 378
Target Start/End: Complemental strand, 52364932 - 52364838
Alignment:
Q  285 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggatta 378  Q
    |||||||||| ||||||  |||| ||| | |||||||||| |||| || ||||||| ||| ||| ||||||||| | ||||||||||| ||||||    
T  52364932 ctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgcacgagctggatta 52364838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 416
Target Start/End: Complemental strand, 15085030 - 15084945
Alignment:
Q  331 agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||||| ||||||| || |||| | | |||| ||||||  |||||||||  |||||||||||  ||| |||||||||||||||    
T  15085030 agaacaacggttggccagtgtgcatacctctacgtacgagctagattagtcgtctatctttggtggatcggaaaccggtgtgaaag 15084945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 272 - 416
Target Start/End: Original strand, 47219106 - 47219251
Alignment:
Q  272 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgag 370  Q
    |||||| ||||| ||| |||||| ||||||| |||| ||| |   |||||||| ||| | ||| ||||| ||||| | ||||||||| | |||||| |||    
T  47219106 cagtggtaatgagctctttccaaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgag 47219205  T
Q  371 ccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||||||||   | ||||| || |||| ||||||||| |||||    
T  47219206 ccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaag 47219251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 410
Target Start/End: Complemental strand, 50405686 - 50405609
Alignment:
Q  333 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    ||||||| ||| ||| ||||||||| | |||||||||| ||||||||||||  | | |||||| |||| |||||||||    
T  50405686 aacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtg 50405609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 7747217 - 7747381
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| | ||||| ||||||||||||||| ||     
T  7747217 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgt 7747316  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| |||||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  7747317 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 7747381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 22593078 - 22593207
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| |||||||||||| ||| || |||||||| ||||||| |||    
T  22593078 aaccaagttgcttgtgctccagtggcaaggagctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgc 22593176  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | |||||| |||||||||||||||    
T  22593177 gcatgcctctacgcatgagccggattagtcg 22593207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 10026779 - 10026615
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| |||||| |||||| || |||||||||| |||||| |||| |||| | | ||||||||  |||| | ||||||||||||||| |||    
T  10026779 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtactcggaaaataccgggttcgattctcagggggaacaacgtttggccagtgc 10026680  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| ||||  |||||||||    
T  10026679 gcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaactagtgtgaaag 10026615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 18902693 - 18902529
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||| ||||| ||| | | |||||||| ||| || |||||||| ||| ||| |||    
T  18902693 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgc 18902594  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    || ||  | |||||||||||| ||||||||||  | |||||||| |||| ||||||||| |||||    
T  18902593 gcgtgtctctacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 18902529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 38005345 - 38005509
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| ||| |||||||| || ||| |||||||| ||||||| |||    
T  38005345 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgc 38005444  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | ||| || ||||||||||||||||  | ||||||||  ||| |||| |||| |||||    
T  38005445 gcatgcctctacacatgagccggattagtcgcccacctttggtggatcggaaactggtgcgaaag 38005509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 256 - 410
Target Start/End: Original strand, 21286390 - 21286545
Alignment:
Q  256 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgca 354  Q
    ||||||| ||||||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||||| | ||||||| ||| ||| ||||||    
T  21286390 caagttgtttgagctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgca 21286489  T
Q  355 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    ||| | ||||||||||| ||||||||| |  ||| |||||| || | |||||||||    
T  21286490 tgcctctacgcacgagctggattagtcactcatcattggtgggttggaaaccggtg 21286545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 253 - 383
Target Start/End: Original strand, 29653571 - 29653701
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||||||||| ||||||| |||||| || |||||| | |  ||||||||||| ||| ||||||| |||| || |||    
T  29653571 aaccaagttgtttg-gctccagtggcaatgaacttcttccaaggacgtactccggaaataccggattcgatttccagggaaaacaacgcttgggcagtgc 29653669  T
Q  352 gcatgcatttacgcacgagccggattagtcgc 383  Q
    |||||| | ||||||||||||| |||||||||    
T  29653670 gcatgcctctacgcacgagccgaattagtcgc 29653701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 257 - 410
Target Start/End: Original strand, 7787003 - 7787157
Alignment:
Q  257 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 355  Q
    |||||| ||| ||||||||||||| ||||||||| | | ||||||  |||| ||| | | |||||||||||||| | |||||   ||||||| | |||||    
T  7787003 aagttggttgggctccagtggcaaggaactcctttctaggacgtacccggggaataccgggttcgatttccagggggaacaatacttggccagtacgcat 7787102  T
Q  356 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    || | |||||||||||||||||||||||  ||||||||||  |||||||||||||    
T  7787103 gcctctacgcacgagccggattagtcgcccatctttggtggatcgaaaaccggtg 7787157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 253 - 381
Target Start/End: Complemental strand, 13026574 - 13026445
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||||| | || |||   | ||||||||  ||||| |||||| | ||||||| |||    
T  13026574 aaccaagttgattgaactccagtggcaaggaactccttccaaggacgtatccagggaatatcgggttcgattatcaggaggaacaatgattggccagtgc 13026475  T
Q  352 gcatgcatttacgcacgagccggattagtc 381  Q
    |||||| | |||||| ||||||||||||||    
T  13026474 gcatgcctctacgcatgagccggattagtc 13026445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 256 - 404
Target Start/End: Complemental strand, 45263827 - 45263678
Alignment:
Q  256 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgca 354  Q
    ||||||| ||| ||||||||||||| || |||||| |||| |  ||| |||| ||| | | |||||||| |||| | |||||||| ||||||| ||||||    
T  45263827 caagttgtttgggctccagtggcaaggagctcctttcaaaaatttatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgca 45263728  T
Q  355 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaa 404  Q
    ||| | |||||||||||||||||| ||||  |||||||||| ||||||||    
T  45263727 tgcctctacgcacgagccggattaatcgctcatctttggtgggtcgaaaa 45263678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 331444 - 331608
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| |||||||||||||||| ||| |||||| ||||||  |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  331444 aaccaagttgcttgggctccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 331543  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| || | ||||| || ||||||    
T  331544 gcatgcttctacgcatgagccggattagtcgcccacctttggtgggttggaaaccagtatgaaag 331608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 269 - 416
Target Start/End: Complemental strand, 25540551 - 25540403
Alignment:
Q  269 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcac 367  Q
    |||||||||||| || ||| |||||| |||||||  ||| ||| ||| |||||||| | ||| | ||||||| ||||||| ||||||||| | |||||||    
T  25540551 ctccagtggcaaggagctcattccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcac 25540452  T
Q  368 gagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||||||||||   | |||||||| |||| ||||||||| |||||    
T  25540451 gagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 25540403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 42770814 - 42770659
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| || ||||| | | |||| |||  |||| | ||||||| ||||||| |||    
T  42770814 aaccaagttgcttgggctccagtggcaaagagctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgc 42770715  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccg 407  Q
    |||||| | | |||||||||||||||| |||   | |||||||| |||||||||||    
T  42770714 gcatgcctcttcgcacgagccggattaatcgtccacctttggtgggtcgaaaaccg 42770659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 44945537 - 44945700
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| |||| |||||||| || |||||||||| |||||| ||||  ||| ||| ||| |||| ||||  |||||||| ||||  | ||||    
T  44945537 aaccaagttgcttgggctcaagtggcaaggagctccttccaaggacgtactcggagaatactgggtttgattcccagaggaacaacgcttggatagtgcg 44945636  T
Q  353 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||| | |||||||||||||||||||||||  | |||| |||  ||| ||||||||| |||||    
T  44945637 catgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaag 44945700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 418
Target Start/End: Original strand, 2550811 - 2550977
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||| ||| ||||||| |||| |||   | |||||||| |||||| |||||||  || |||| |||    
T  2550811 aaccaagttgcttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgc 2550910  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    |||||  | |||||| ||||||||||||||||  |  ||||||| || ||||||||||| |||||||    
T  2550911 gcatgtctctacgcatgagccggattagtcgcccacttttggtgggttgaaaaccggtgcgaaagaa 2550977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 29422158 - 29422288
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 351  Q
    |||||||||| ||| |||||||| |||| || |||||| ||| ||||||  |||| ||| ||| ||||||||||||| | |||||||  ||||||| ||     
T  29422158 aaccaagttgtttgggctccagtagcaaggagctcctttcaaggacgtacccggggaatactgggttcgatttccagagggaacaacacttggccaatga 29422257  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||| | ||||||||||||||||||||||||    
T  29422258 gcatacctttacgcacgagccggattagtcg 29422288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 251 - 418
Target Start/End: Complemental strand, 6358316 - 6358148
Alignment:
Q  251 tgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccatt 349  Q
    |||||| ||||| ||| |||||||||||||  | ||| ||| || ||||||| |||| ||| |    ||||||||||||| | ||||||  ||||||| |    
T  6358316 tgaaccgagttgtttgggctccagtggcaagaagctcattcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagt 6358217  T
Q  350 gcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    |||||||| | |||||| |||||||||||||||   | | |||||| ||||||||||||||||||||||    
T  6358216 gcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccggtgtgaaagaa 6358148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 8410074 - 8410238
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||  |||   | |||||||| ||||| | ||||||  ||||||| |||    
T  8410074 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgc 8410173  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||||||||||||||||||||  |  ||||| | |||| ||||||||| |||||    
T  8410174 gcatgcctctacgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgcgaaag 8410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 285 - 416
Target Start/End: Original strand, 10823035 - 10823167
Alignment:
Q  285 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 383  Q
    |||||||||| ||||||  |||| ||| | | ||| |||| ||||||| ||||||| ||||||| ||||||||| | |||||||||||||||||||||||    
T  10823035 ctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgc 10823134  T
Q  384 atatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
      | |||| ||| |||| ||||||||| |||||    
T  10823135 ccaccttttgtgggtcggaaaccggtgcgaaag 10823167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 270 - 416
Target Start/End: Original strand, 41220595 - 41220742
Alignment:
Q  270 tccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacg 368  Q
    ||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| |||||| |||||||| ||||||| ||||||||| | |||||| |    
T  41220595 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 41220694  T
Q  369 agccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||| ||||||||   | |||| ||| |||| ||||||||| |||||    
T  41220695 agccgaattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 41220742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 35946725 - 35946811
Alignment:
Q  296 gacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 382  Q
    ||||||| |||| ||| | |||||||||| | ||| |||||||| |||||||||| |||||| | ||||||||||||||||||||||    
T  35946725 gacgtatccggggaataccgagttcgattcctaggggaacaacgcttggccattgtgcatgcctctacgcacgagccggattagtcg 35946811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 410
Target Start/End: Complemental strand, 39201671 - 39201513
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||||||| |||  |||||||| || |||||||||| |||||| ||| | ||| | || |||||||  |||| | ||||| ||||||||| ||     
T  39201671 aaccaagttgattgggctatagtggcaaggagctccttccaaggacgtactcgaggaataccgaattcgattctcagggggaacaatgtttggccagtgt 39201572  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| |||||||||    
T  39201571 gcatgcctctacgcatgagccggattagtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 251 - 416
Target Start/End: Original strand, 44139425 - 44139591
Alignment:
Q  251 tgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccatt 349  Q
    |||||||||||| ||| ||||||||||  | ||||||||||||| || | ||  ||| ||| | | |||||||| ||||| | ||||||| ||||||| |    
T  44139425 tgaaccaagttgcttgggctccagtggtgaggaactccttccaaggatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagt 44139524  T
Q  350 gcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||| ||| | |||||||||||||||||||||||  | |  ||||| |||| ||||||||| |||||    
T  44139525 gcgcgtgcctctacgcacgagccggattagtcgcccaccaatggtgggtcggaaaccggtgcgaaag 44139591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 256 - 416
Target Start/End: Original strand, 37560119 - 37560280
Alignment:
Q  256 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgcgca 354  Q
    ||||||| ||| |||||||||| ||  | |||||||||| ||||||  || | ||| |   |||||||| || ||| ||||||||||||| || ||||||    
T  37560119 caagttgtttgggctccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgca 37560218  T
Q  355 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||| | |||||||||||||||||| |||   | ||||| || ||||||||||||||||||||    
T  37560219 tgcctctacgcacgagccggattaatcgtccacctttgatgggtcgaaaaccggtgtgaaag 37560280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 317 - 416
Target Start/End: Original strand, 12455317 - 12455417
Alignment:
Q  317 gttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 415  Q
    |||||||||||||| ||| ||||| || |||| ||||||||| | |||||||||||||||||||||||  | | |||||| |||| ||||||||| ||||    
T  12455317 gttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcgaaa 12455416  T
Q  416 g 416  Q
    |    
T  12455417 g 12455417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 12864167 - 12864331
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||| ||| || |||||||||| |||||||||||| ||| | |  ||||||||||| || |||||||  |||| || |||    
T  12864167 aaccaagttgtttgggctccagtgacaaggagctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgc 12864266  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | | |||| ||||| |||||||||   | | |||||| |||| ||||||||| |||||    
T  12864267 gcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 12864331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 252 - 419
Target Start/End: Original strand, 38962705 - 38962873
Alignment:
Q  252 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattg 350  Q
    ||||||||||| |||  ||||||||| || || ||| || ||| ||||||| |||| ||| | | ||||||||| |||||| ||||||| ||||||| ||    
T  38962705 gaaccaagttgtttggactccagtggtaaggagctcatttcaaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtg 38962804  T
Q  351 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaag 419  Q
    ||||||| | |||||| || ||||||||||||   | |||||||| |||  |||| |||| ||||||||    
T  38962805 cgcatgcctctacgcatgaaccggattagtcgtccacctttggtgggtcagaaactggtgcgaaagaag 38962873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 383
Target Start/End: Complemental strand, 21180477 - 21180346
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  ||   ||| | |  ||||||| ||| ||||||||||  ||||||| |||    
T  21180477 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtgc 21180378  T
Q  352 gcatgcatttacgcacgagccggattagtcgc 383  Q
     ||||| | |||||||||||||||||||||||    
T  21180377 acatgcctctacgcacgagccggattagtcgc 21180346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 418
Target Start/End: Complemental strand, 9360830 - 9360745
Alignment:
Q  333 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    ||||||||||||||| ||||||||| | ||||||||||||| |||||||||  | |||| ||| | || ||||||||| |||||||    
T  9360830 aacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttagtgggccggaaaccggtgcgaaagaa 9360745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 410
Target Start/End: Original strand, 24179576 - 24179669
Alignment:
Q  317 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    ||||||||  |||| |||||||||||||||| ||| ||||| | |||||| |||||||||||||||   |||||||||| ||  ||||||||||    
T  24179576 gttcgattctcaggggaacaacgtttggccagtgcacatgcctctacgcatgagccggattagtcgtccatctttggtgggttaaaaaccggtg 24179669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 2528504 - 2528340
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||| ||| ||| |||||||||||||||| |||||||||| |||||| ||| | ||  | | |||||||| ||| || |||||||| |||| || ||     
T  2528504 aaccaaattgtttgggctccagtggcaatgagctccttccaaggacgtactcgaggaacaccgggttcgattcccagggggaacaacgcttggtcagtgt 2528405  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | ||| ||  |||||||||||||||  |||||| ||| |||| |||| |||| |||||    
T  2528404 gcatgcctctacacataagccggattagtcgctcatctttagtgagtcggaaactggtgcgaaag 2528340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 14169772 - 14169608
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||| ||| ||  || |||||| |||||||||||| |||   | |||||||| ||| || |||||||  ||| ||| |||    
T  14169772 aaccaagttgtttgggctccagtgacaaggagatctttccaaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgc 14169673  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||  | |||||| |||||||||||||||  || | |||||| |||| ||||||||| |||||    
T  14169672 gcatgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaag 14169608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 253 - 383
Target Start/End: Original strand, 15079426 - 15079557
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||| ||||||| |||| |||||||| ||||||  |||| ||| | | |||||||||||| || |||||||| ||| ||| ||     
T  15079426 aaccaagttgcttgggctccggtggcaaggaacaccttccaaggacgtacccggggaatacagggttcgatttccagggggaacaacgcttgaccagtgt 15079525  T
Q  352 gcatgcatttacgcacgagccggattagtcgc 383  Q
    |||||  | ||||||||||||  |||||||||    
T  15079526 gcatgactctacgcacgagccaaattagtcgc 15079557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 272 - 418
Target Start/End: Original strand, 16034899 - 16035046
Alignment:
Q  272 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgag 370  Q
    |||||| || ||||||||||||| ||||||| || | ||| | | ||||||||| |||| | ||||||| ||| ||| || |||||| | |||| |||||    
T  16034899 cagtggtaaggaactccttccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgag 16034998  T
Q  371 ccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    |||||||||||||  | | ||| || |||| ||||||||| |||||||    
T  16034999 ccggattagtcgctcaccattgatgagtcggaaaccggtgcgaaagaa 16035046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 268 - 382
Target Start/End: Original strand, 25549686 - 25549801
Alignment:
Q  268 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgca 366  Q
    ||||||||||||| || ||||||||||  ||||||| ||| ||| ||| ||||||||   ||| | |||||| |||||| | ||| ||||| | ||||||    
T  25549686 gctccagtggcaaggagctccttccaagtacgtatttggggaatactgggttcgattcttagggaaaacaacatttggctagtgcacatgcctctacgca 25549785  T
Q  367 cgagccggattagtcg 382  Q
    ||||||||||||||||    
T  25549786 cgagccggattagtcg 25549801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 415
Target Start/End: Complemental strand, 20612699 - 20612534
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga--gaacaacgtttggccattg 350  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |  ||||||||| ||| | | ||||||||  |||||  |||||||  ||||||| ||    
T  20612699 aaccaagttgcttgggctccagtggcaaggagctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtg 20612600  T
Q  351 cgcatgcatttacgcacgagcc-ggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 415  Q
    ||||||| | || ||| ||||| ||||||||||   | | |||||| |||| ||||||||| ||||    
T  20612599 cgcatgcctctatgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 20612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 34130400 - 34130335
Alignment:
Q  317 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 382  Q
    ||||||||| ||||||||||||||||| ||||||| ||||  | |||||| ||||| |||||||||    
T  34130400 gttcgattttcaggagaacaacgtttgaccattgcacatgtctctacgcatgagccagattagtcg 34130335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 27725963 - 27726047
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | ||||||| ||||||||| | ||||||| |||||||||||||||  | |  ||||| |||| |||||||||||||||    
T  27725963 gaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaaccggtgtgaaag 27726047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 415
Target Start/End: Complemental strand, 10046639 - 10046477
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| |||||| |||||| || ||||||||||  |||||| |||  ||| | | |||||||| || |||  ||||||||||| | | |||    
T  10046639 aaccaagttgcttgggctccaatggcaaggagctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacgtttgac-agtgc 10046541  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 415  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| ||||  ||||||||    
T  10046540 gcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaactagtgtgaaa 10046477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 20963268 - 20963198
Alignment:
Q  257 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca 328  Q
    |||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | ||||||||||||||    
T  20963268 aagttgtttgggctccagtggcaaggacctccttccaatgacgtatccggggaatac-gagttcgatttcca 20963198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 29697467 - 29697558
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcggga-aatgctgagttcgatttccaggagaacaacgtttg 343  Q
    ||||||| || ||| ||||||||||||| |||||||||||||  |||||  ||| | ||| ||||||| |||| ||||| ||||||||||||    
T  29697467 aaccaaggtgtttgggctccagtggcaaggaactccttccaataacgtacacggaagaatactgagtttgattcccaggggaacaacgtttg 29697558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 366
Target Start/End: Complemental strand, 40969083 - 40968964
Alignment:
Q  248 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggcc 346  Q
    ||||||||||||||| ||| |||| |||||||||||  || |||||| |||||  || || ||| | | |||||||||||| ||| |||||||||||| |    
T  40969083 atatgaaccaagttgcttgggctctagtggcaatgagttcattccaaggacgttctcagggaataccgggttcgatttccagggaaaacaacgtttggtc 40968984  T
Q  347 attgcgcatgcatttacgca 366  Q
    | |||| |||| | ||||||    
T  40968983 agtgcgaatgcctctacgca 40968964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 251 - 416
Target Start/End: Complemental strand, 3811856 - 3811690
Alignment:
Q  251 tgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccatt 349  Q
    |||||||||||| |||  || || |||||| ||||||||||||| |||||| ||| | |||   | |||||||| |||| | |||||||  |||| || |    
T  3811856 tgaaccaagttgtttggtcttcaatggcaaggaactccttccaaggacgtactcgaggaatatcgggttcgattcccagagggaacaacacttggtcaat 3811757  T
Q  350 gcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||| | |||||| ||||||||||| ||||  | |||||||| |||  |||||| || |||||    
T  3811756 gcgcatgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaaccgatgcgaaag 3811690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 16813312 - 16813198
Alignment:
Q  268 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 367  Q
    |||||| || ||| || |||||||||| |||||| ||||  ||| |  ||||| | || |||| |||||||||||| ||| | ||||||| | || ||||    
T  16813312 gctccactgacaaggagctccttccaaggacgtactcggagaataccaagttcaactttcaggggaacaacgtttgaccagtacgcatgcctctatgcac 16813213  T
Q  368 gagccggattagtcg 382  Q
    |||||||||||||||    
T  16813212 gagccggattagtcg 16813198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 16852591 - 16852477
Alignment:
Q  268 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 367  Q
    |||||| || ||| || |||||||||| |||||| ||||  ||| |  ||||| | || |||| |||||||||||| ||| | ||||||| | || ||||    
T  16852591 gctccactgacaaggagctccttccaaggacgtactcggagaataccaagttcaactttcaggggaacaacgtttgaccagtacgcatgcctctatgcac 16852492  T
Q  368 gagccggattagtcg 382  Q
    |||||||||||||||    
T  16852491 gagccggattagtcg 16852477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 318 - 381
Target Start/End: Complemental strand, 28525554 - 28525489
Alignment:
Q  318 ttcgatttccaggag--aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtc 381  Q
    ||||||||||||| |  ||||||  ||||||| ||||||||| | |||||||||||||||||||||    
T  28525554 ttcgatttccagggggaaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 28525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 378
Target Start/End: Original strand, 34356149 - 34356275
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || ||  |||||| |||||||  ||| ||| | | |||||||||||| || |||||||  |||| || |||    
T  34356149 aaccaagttgtttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgc 34356248  T
Q  352 gcatgcatttacgcacgagccggatta 378  Q
    |||||| | || ||| |||||||||||    
T  34356249 gcatgcctctatgcatgagccggatta 34356275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 268 - 381
Target Start/End: Complemental strand, 39807033 - 39806919
Alignment:
Q  268 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgca 366  Q
    |||||||||||||    |||||| ||| ||||||  |||| ||| | | |||||||| ||| ||||| ||||||||||||| ||||||||| | ||| ||    
T  39807033 gctccagtggcaagatgctccttacaaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctctacaca 39806934  T
Q  367 cgagccggattagtc 381  Q
    |||| ||||||||||    
T  39806933 cgagtcggattagtc 39806919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 410
Target Start/End: Original strand, 10669612 - 10669693
Alignment:
Q  329 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    ||||||||||| ||||||| ||||||||  | |||||||||| ||||||| |||   | |||||||| |||| |||||||||    
T  10669612 ggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaaccggtg 10669693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 23500844 - 23500795
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 302  Q
    |||||||||| ||| ||||| ||||||| || ||||||||||||||||||    
T  23500844 aaccaagttgtttgggctccggtggcaaggagctccttccaaagacgtat 23500795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 253 - 382
Target Start/End: Complemental strand, 9168414 - 9168286
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||||| |||| ||| | |||  ||||| ||||  |||||||| ||||||| ||||    
T  9168414 aaccaagttgcttgagctccagtggcaagga-ctccttccaaagacgtatccggggaataccgagaacgattcccagaggaacaacgcttggccagtgcg 9168316  T
Q  353 catgcatttacgcacgagccggattagtcg 382  Q
    ||| | | |||||| |||||||||||||||    
T  9168315 catacctctacgcatgagccggattagtcg 9168286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 253 - 380
Target Start/End: Complemental strand, 38897881 - 38897754
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| |||| ||| |||||||| || ||| || ||| |||||||  ||| ||| | | |||||||||||||| |||||||| ||||||| ||||    
T  38897881 aaccaagttgcttgaactcaagtggcaaggagctctttacaaggacgtatatggggaataccgggttcgatttccaggggaacaacgcttggccagtgcg 38897782  T
Q  353 catgcatttacgcacgagccggattagt 380  Q
    ||||| | ||||||||||||||||||||    
T  38897781 catgcctctacgcacgagccggattagt 38897754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 1538375 - 1538539
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||| | |||||||||||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  1538375 aaccaagttgtttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgc 1538474  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| ||||||||||| |||   | | |||||| |||| ||||||||| |||||    
T  1538475 gcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaag 1538539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 416
Target Start/End: Complemental strand, 5732083 - 5731919
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| |||||| |||||||| ||||||| |||    
T  5732083 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 5731984  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||| | ||||| |||||||||   | |||| ||| |||| ||||||||| |||||    
T  5731983 gcatgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 5731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 252 - 382
Target Start/End: Original strand, 19572667 - 19572798
Alignment:
Q  252 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattg 350  Q
    ||||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | ||| |||| ||| || |||||||  ||||||| ||    
T  19572667 gaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtg 19572766  T
Q  351 cgcatgcatttacgcacgagccggattagtcg 382  Q
    ||||||| | |||||| |||||||||||||||    
T  19572767 cgcatgcctctacgcatgagccggattagtcg 19572798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 268 - 418
Target Start/End: Complemental strand, 25417331 - 25417180
Alignment:
Q  268 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgca 366  Q
    ||||||||||||| || |||||||||| |||||| ||||| ||| | | |||||||| ||||| | ||||||| ||||||| ||||||||| | |||| |    
T  25417331 gctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaa 25417232  T
Q  367 cgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    |||||||||||||||   || | |||||| |||  ||||||||| |||||||    
T  25417231 cgagccggattagtcatttaccattggtgggtcagaaaccggtgcgaaagaa 25417180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 37263185 - 37263314
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| ||||||||||||| ||  |||||| || ||||||  |||| |||   | ||||||||  |||| |||||||| ||||||| ||||    
T  37263185 aaccaagttgcttgggctccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgattctcaggggaacaacgcttggccaatgcg 37263284  T
Q  353 catgcatttacgcacgagccggattagtcg 382  Q
    ||||| | ||||||||||||||||||||||    
T  37263285 catgcctctacgcacgagccggattagtcg 37263314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 253 - 382
Target Start/End: Complemental strand, 41163622 - 41163493
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| ||||||||||||| || ||||||||||  |||||  |||| ||| | | |||||||| ||||| |||||||||||||||| |||     
T  41163622 aaccaagttgtttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcgattcccaggggaacaacgtttggccagtgca 41163523  T
Q  353 catgcatttacgcacgagccggattagtcg 382  Q
    ||||  | |||||| |||| ||||||||||    
T  41163522 catgtctctacgcatgagctggattagtcg 41163493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 9812816 - 9812980
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | ||||| ||||||| ||||||| ||     
T  9812816 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgt 9812915  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| || |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  9812916 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 9812980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 42086271 - 42086435
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||| ||||||| || |||||||||| ||||||  || | ||| | | |||||||| ||||| | ||||||| ||| ||| |||    
T  42086271 aaccaagttgcttgggctccggtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgc 42086370  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| ||||||||| |||||    
T  42086371 gcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 42086435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 286 - 416
Target Start/End: Original strand, 12081885 - 12082016
Alignment:
Q  286 tccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgca 384  Q
    |||||| || ||||||| |||| ||| ||| ||||||||  |||| | ||||||| ||||||| ||||||||||| ||||||||||||| ||||||||      
T  12081885 tccttcaaaggacgtatccggggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtc 12081984  T
Q  385 tatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
     | |||||||| |||| ||| |||||||||||    
T  12081985 cacctttggtgagtcggaaatcggtgtgaaag 12082016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 410
Target Start/End: Complemental strand, 3654075 - 3653919
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| ||||||||| |||||| ||| |||||| ||||||  |||  ||| | | |||||||| | || ||||||||| ||| ||| ||||    
T  3654075 aaccaagttgtttgggctccagtgacaatgagctctttccaaggacgtacccggagaataccgggttcgattcctag-agaacaacgcttgaccagtgcg 3653977  T
Q  353 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    ||||| | |||||||||| |||||||||||   | ||||||||  |||||||||||||    
T  3653976 catgcctctacgcacgaggcggattagtcgtccacctttggtggatcgaaaaccggtg 3653919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 5079275 - 5079438
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| | ||| ||||||| || ||||||||||  |||||| || | ||| | | | | |||||||||| | |||| || |||| || |||    
T  5079275 aaccaagttgtttgggttccggtggcaaagagctccttccaagcacgtatccgtggaataccggggttgatttccagggggaacagcgcttggtcaatgc 5079374  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||||||||||||||||||||  | |||||||| |||||||||||||| |||||    
T  5079375 gcatgcttctacgcacgagccggattagtcgcccacctttggtg-gtcgaaaaccggtgcgaaag 5079438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 12704958 - 12705122
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 351  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | |||| |||||||| ||| ||| ||     
T  12704958 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgt 12705057  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||| | |||||| || |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  12705058 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 12705122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 392
Target Start/End: Original strand, 26077085 - 26077225
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 351  Q
    |||||||||| ||| |||||||||| || || ||| |||||| |||||||| ||| ||| ||  |||||||| |||| | |||||||| ||||||| |||    
T  26077085 aaccaagttgtttgggctccagtggtaaggagctcattccaaggacgtatttggggaatactaggttcgattcccagagggaacaacgcttggccagtgc 26077184  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttg 392  Q
     ||||| | |||||||||||| ||||| ||||  |||||||    
T  26077185 acatgcctctacgcacgagccagattaatcgctcatctttg 26077225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 383
Target Start/End: Original strand, 7866525 - 7866656
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  || | ||| | | |||||||| | ||||| ||||||| ||||||| ||     
T  7866525 aaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgt 7866624  T
Q  352 gcatgcatttacgcacgagccggattagtcgc 383  Q
    |||||| | ||||||||| |||||||||||||    
T  7866625 gcatgcctctacgcacgaaccggattagtcgc 7866656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 294 - 416
Target Start/End: Original strand, 40117400 - 40117523
Alignment:
Q  294 aagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttg 392  Q
    |||||||||||||| |||   || ||||||||||||| | ||||||| ||||||| ||||||||| | |||||| ||||||||||| |||   | |||||    
T  40117400 aagacgtattcggggaatatcgaattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttg 40117499  T
Q  393 gtgtgtcgaaaaccggtgtgaaag 416  Q
    |||  ||||||||||||| |||||    
T  40117500 gtggatcgaaaaccggtgcgaaag 40117523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 410
Target Start/End: Complemental strand, 6764539 - 6764462
Alignment:
Q  333 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    ||||| ||||||| | ||||||||| | ||||||||||||||||||||||| |||||||| || |||| |||| ||||    
T  6764539 aacaatgtttggctagtgcgcatgcctctacgcacgagccggattagtcgcctatctttgttgggtcggaaactggtg 6764462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 252 - 416
Target Start/End: Original strand, 8513462 - 8513627
Alignment:
Q  252 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattg 350  Q
    ||||||||||| |||  ||| |||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | ||| ||| ||| | ||||||| ||    
T  8513462 gaaccaagttgcttggactcaagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtg 8513561  T
Q  351 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    | ||||| | |||||||||||| |||||||||   | |||||||| |||| ||||||||| |||||    
T  8513562 cacatgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 8513627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 356
Target Start/End: Original strand, 16755005 - 16755109
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||  ||| ||| ||||||||| || ||| |||||||||||||| |||| ||| ||| ||||||||| |||||| ||||||  ||||||| |||    
T  16755005 aaccaagttccttgggcttcagtggcaaggagctctttccaaagacgtatccggggaatactgggttcgattttcaggagaaacaacacttggccagtgc 16755104  T
Q  352 gcatg 356  Q
    |||||    
T  16755105 gcatg 16755109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 307
Target Start/End: Original strand, 28862779 - 28862823
Alignment:
Q  263 attgagctccagtggcaatgaactccttccaaagacgtattcggg 307  Q
    |||||||||||||||||| || |||||||||||||||||||||||    
T  28862779 attgagctccagtggcaaggagctccttccaaagacgtattcggg 28862823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 18327730 - 18327789
Alignment:
Q  269 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca 328  Q
    |||||||||||| || |||||||||| ||||||||| |||||| ||| ||||||||||||    
T  18327730 ctccagtggcaaggagctccttccaaggacgtattcaggaaatactgggttcgatttcca 18327789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 253 - 378
Target Start/End: Complemental strand, 20682781 - 20682654
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactcc-ttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattg 350  Q
    |||||||||| ||| ||||||||| ||| || |||| ||| || ||||||  |||| |||  || ||| |||||||||| | ||||||| ||||||| ||    
T  20682781 aaccaagttgcttgggctccagtgacaaggagctccattctaaggacgtacccggggaatattgggttagatttccagggggaacaacgcttggccagtg 20682682  T
Q  351 cgcatgcatttacgcacgagccggatta 378  Q
    ||||||| | ||||||||||||||||||    
T  20682681 cgcatgcctctacgcacgagccggatta 20682654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 323 - 410
Target Start/End: Complemental strand, 24463978 - 24463891
Alignment:
Q  323 tttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    |||| ||| |||||||| ||||||| ||||||||| | || ||||||||||||||||||||  | ||||  || ||||||||||||||    
T  24463978 tttcaaggcgaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccacctttactgggtcgaaaaccggtg 24463891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 418
Target Start/End: Complemental strand, 11845944 - 11845798
Alignment:
Q  273 agtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagc 371  Q
    |||||||| || |||||||||| ||||||  || |||||   | |||||||||| ||| | ||||||||||||||| ||||||||| | |||| | ||||    
T  11845944 agtggcaaggagctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacgtatgagc 11845845  T
Q  372 cggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    || |||| ||||  | ||||| || || | |||||||||||||||||    
T  11845844 cgaattaatcgcccacctttgatgggttggaaaccggtgtgaaagaa 11845798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 317 - 418
Target Start/End: Complemental strand, 14588716 - 14588614
Alignment:
Q  317 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 415  Q
    ||||||||| |||||| || |||| ||| ||| ||||||||| | |||||| |||||||||||||||   | |||||||| | |||||||||||| ||||    
T  14588716 gttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgagccgaaaaccggtgcgaaa 14588617  T
Q  416 gaa 418  Q
    |||    
T  14588616 gaa 14588614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 378
Target Start/End: Complemental strand, 18136443 - 18136317
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||||||||||| |||  ||| | | |||||||| ||| || |||||||  |||| || ||     
T  18136443 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtgt 18136344  T
Q  352 gcatgcatttacgcacgagccggatta 378  Q
    |||||| | ||| || |||||||||||    
T  18136343 gcatgcctctacacatgagccggatta 18136317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 20525782 - 20525912
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||| ||| || |||| |||| |||   | |||||||| |||||  |||||||  || |||| |||    
T  20525782 aaccaagttgcttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgc 20525881  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | |||||| |||||||||||||||    
T  20525882 gcatgcctctacgcatgagccggattagtcg 20525912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 374
Target Start/End: Original strand, 28857072 - 28857194
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||| |  |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  28857072 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 28857171  T
Q  352 gcatgcatttacgcacgagccgg 374  Q
    |||||| | |||||| |||||||    
T  28857172 gcatgcctctacgcatgagccgg 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 369
Target Start/End: Complemental strand, 35403675 - 35403558
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 351  Q
    |||||| ||| ||| ||||||||||||| || |||||||||| |||||| ||||||||| | | |||||||| |   || |||||||| ||||||| |||    
T  35403675 aaccaacttgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaaataccgggttcgattctaagggggaacaacgcttggccaatgc 35403576  T
Q  352 gcatgcatttacgcacga 369  Q
    |||||  | |||||||||    
T  35403575 gcatgtctctacgcacga 35403558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 9805028 - 9805112
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||| ||||||| ||||||||| | |||||| |||||||||||||||   | |||||||| |||| |||| |||| |||||    
T  9805028 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaag 9805112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 35561986 - 35561850
Alignment:
Q  248 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggcc 346  Q
    |||| |||||||||| |||  |||||||||||| || |||||||||| ||||||| |||| |||   |||||||| |||||| | |||||||   || ||    
T  35561986 atattaaccaagttgcttggactccagtggcaaagagctccttccaatgacgtatccggggaatatcgagttcgacttccagagggaacaacacctgacc 35561887  T
Q  347 attgcgcatgcatttacgcacgagccggattagtcgc 383  Q
    | ||||||||| | ||| || ||||| ||||||||||    
T  35561886 agtgcgcatgcctctacacatgagccagattagtcgc 35561850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 41801001 - 41801085
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||| ||| ||| ||||||||  | ||||||||||||||||||||||   ||||||| || |||| ||| |||||||||||    
T  41801001 gaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtcgttcatctttgatgggtcggaaagcggtgtgaaag 41801085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 416
Target Start/End: Original strand, 2485141 - 2485304
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| |||  ||||| |||||| || ||| |||||| ||||||||| || ||| ||| |||||||| | ||| |||||||  | ||||  ||||    
T  2485141 aaccaagttgtttggactccaatggcaaggagctcattccaaggacgtattcagggaatactgggttcgattcctaggggaacaaccctgggcctgtgcg 2485240  T
Q  353 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||| | |||| | ||| ||||||||||||  | ||||| || |||| |||||| || |||||    
T  2485241 catgcctctacgtatgagtcggattagtcgctcacctttgatgggtcggaaaccgatgcgaaag 2485304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 315 - 415
Target Start/End: Original strand, 21487623 - 21487721
Alignment:
Q  315 gagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtga 413  Q
    ||||||||||| |||||| ||||||||||||| | ||||||||| | |   |||||||||||||||||||  | ||||  || |||||||||||||| ||    
T  21487623 gagttcgattttcaggaggaacaacgtttggctagtgcgcatgcctct---cacgagccggattagtcgcccacctttaatgggtcgaaaaccggtgcga 21487719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 332 - 395
Target Start/End: Original strand, 30995145 - 30995208
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtg 395  Q
    |||||||  |||||||  |||||||| | |||||||||||||||||||||||  ||||||||||    
T  30995145 gaacaacacttggccagggcgcatgcctctacgcacgagccggattagtcgctcatctttggtg 30995208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 1826801 - 1826855
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcggg 307  Q
    |||||||||| ||| ||| |||| ||||||| ||||||||||||||||| |||||    
T  1826801 aaccaagttgtttgggcttcagtagcaatgagctccttccaaagacgtactcggg 1826855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 30349523 - 30349653
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| ||  ||||||||| ||||||| |||| ||| | | ||| |||||| | || |||||| | ||||||| |||    
T  30349523 aaccaagttgtttgggctccagtggcaaggagttccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgc 30349622  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | || ||| |||| | ||||||||    
T  30349623 gcatgcctctatgcatgagctgaattagtcg 30349653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 332 - 410
Target Start/End: Complemental strand, 39099862 - 39099784
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    |||||||  ||||||| ||| ||||| | |||||| ||||||||||||||||  | |||||||| |||| |||||||||    
T  39099862 gaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtg 39099784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 42291588 - 42291538
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 382  Q
    |||||||| ||||||| ||| ||||| | ||||||||||||||||||||||    
T  42291588 gaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcg 42291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 406
Target Start/End: Complemental strand, 18294646 - 18294493
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| |||  || ||||| ||| ||||||||||||| ||| || ||||  ||| | | |||| || |||||| |||||||| |||| || ||||    
T  18294646 aaccaagttgtttggacttcagtgacaaggaactccttccaaggacatactcggagaataccgggttcaatatccaggggaacaacgcttggtcagtgcg 18294547  T
Q  353 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaacc 406  Q
    ||| | | ||| || || |||||||| ||||  |||||||||| |||| |||||    
T  18294546 catacctctacacatgaaccggattaatcgcccatctttggtgggtcggaaacc 18294493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 23383592 - 23383641
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 302  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||    
T  23383592 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtat 23383641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 378
Target Start/End: Original strand, 24875366 - 24875415
Alignment:
Q  329 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggatta 378  Q
    ||||||||||||||| ||| ||||||||  | ||||||||||||||||||    
T  24875366 ggagaacaacgtttgaccagtgcgcatgtctctacgcacgagccggatta 24875415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 383
Target Start/End: Original strand, 25452939 - 25453000
Alignment:
Q  322 atttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 383  Q
    |||| |||| |||||| ||||| ||| || |||||| | |||||||||||||||||||||||    
T  25452939 attttcaggggaacaatgtttgaccagtgtgcatgcctctacgcacgagccggattagtcgc 25453000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 382
Target Start/End: Complemental strand, 35638167 - 35638066
Alignment:
Q  282 gaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagt 380  Q
    ||||||||||||  |||||||| ||| |||  ||| |||||||| |||||| |||||||||||| || || |||| | | |||||||||| | |||||||    
T  35638167 gaactccttccagggacgtatttggggaatattgaattcgattttcaggaggaacaacgtttggtcagtgtgcatacctctacgcacgagtcagattagt 35638068  T
Q  381 cg 382  Q
    ||    
T  35638067 cg 35638066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 410
Target Start/End: Original strand, 68463 - 68618
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| ||| |||| |||||||| || |||||||||| ||||||  ||||||||   | |||||||| ||||| | ||||||| ||||    |||    
T  68463 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttggg---tgc 68559  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 410  Q
    |||||| | |||||||||||||||||||||||  | |||||||| ||||||||||||||    
T  68560 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtg 68618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 253 - 409
Target Start/End: Original strand, 40990 - 41147
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 351  Q
    |||||||||| ||| ||||||||||||| || |||||||||  |||||| || || |||   | |||||||| || ||| |||||||  |||| || ||     
T  40990 aaccaagttgtttgggctccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgattctcaaggggaacaacacttggtcagtgt 41089  T
Q  352 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 409  Q
    |||||| | |||||||||||||||||||||||  |||||||||| |||| ||||||||    
T  41090 gcatgcctctacgcacgagccggattagtcgcccatctttggtgagtcggaaaccggt 41147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 259 - 383
Target Start/End: Complemental strand, 95136 - 95013
Alignment:
Q  259 gttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgca 358  Q
    |||| ||| |||||| |||||| || ||||||||||  | |||| |||| ||| |   |||||||||| |||| ||||||||||| ||| |||||||||     
T  95136 gttgcttgggctccaatggcaaggagctccttccaagaaagtatccggggaataccaggttcgatttctagga-aacaacgtttgaccagtgcgcatgcc 95038  T
Q  359 tttacgcacgagccggattagtcgc 383  Q
    |||||||| ||||||||||||||||    
T  95037 tttacgcatgagccggattagtcgc 95013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 256 - 415
Target Start/End: Original strand, 186467 - 186626
Alignment:
Q  256 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcat 355  Q
    ||||||| |||||||| |||||||| || | ||||| || || ||||| ||  |||   | ||||||||||  |||||| || |||||| || ||| |||    
T  186467 caagttggttgagctctagtggcaaggagcaccttctaaggatgtatttggagaatatcgggttcgatttcagggagaataatgtttggtcagtgcacat 186566  T
Q  356 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 415  Q
    || | ||||||||||||||||||||||   |||||| ||| |||| ||||||||||||||    
T  186567 gcctctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccggtgtgaaa 186626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 416
Target Start/End: Original strand, 224372 - 224427
Alignment:
Q  361 tacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||||||||||||||||||   |||||||||| |||| ||||||||| |||||    
T  224372 tacgcacgagccggattagtcgtccatctttggtgggtcggaaaccggtgcgaaag 224427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 383
Target Start/End: Original strand, 12521 - 12650
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| |||| |||||||| || || ||||||| |||||| ||| ||||| | | |||||||| | ||| |||||||| ||| ||| ||||    
T  12521 aaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattcctagg-gaacaacgcttgaccagtgcg 12619  T
Q  353 catgcatttacgcacgagccggattagtcgc 383  Q
    ||||| | |||||| ||| ||||||||||||    
T  12620 catgcctctacgcatgagtcggattagtcgc 12650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 26129 - 26259
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 351  Q
    |||||||||| |||  ||| ||||||||  ||||||||| || ||| ||   ||| ||| ||| |||||||||||||| | ||||||| ||||||| ||     
T  26129 aaccaagttgcttggactctagtggcaagaaactccttctaaggacatacctggggaatactgggttcgatttccagggggaacaacgcttggccagtgt 26228  T
Q  352 gcatgcatttacgcacgagccggattagtcg 382  Q
    |||||| | ||||||||||||||||||||||    
T  26229 gcatgcctctacgcacgagccggattagtcg 26259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 318 - 382
Target Start/End: Original strand, 9856 - 9921
Alignment:
Q  318 ttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 382  Q
    ||||||||||||| | ||||||| ||||||| ||||||||| | ||||||||||||||||||||||    
T  9856 ttcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcg 9921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 416
Target Start/End: Complemental strand, 1713 - 1613
Alignment:
Q  317 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 415  Q
    |||||||||||||| | ||||||| || |||| ||||||||| | |||||| |||||  |||||||||  | |||||||| |||||||||||||| ||||    
T  1713 gttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgggtcgaaaaccggtgcgaaa 1614  T
Q  416 g 416  Q
    |    
T  1613 g 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 6881 - 6965
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||  ||||||| ||||||||| | |||||| ||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  6881 gaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 6965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 155794 - 155710
Alignment:
Q  332 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    |||||||| ||||| | ||||||||| | |||||||||||||||||||||||  | |||||||| |||| || |||||| |||||    
T  155794 gaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaag 155710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 339 - 418
Target Start/End: Complemental strand, 250101 - 250022
Alignment:
Q  339 gtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 418  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||    |||||||| |||| ||| ||||| |||||||    
T  250101 gtttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaagaa 250022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 5919 - 6048
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 352  Q
    |||||||||| ||| | || |||||||| || |||||| ||| | ||||  |||| ||| ||| |||||||||||||| | |||||| ||||||| |||     
T  5919 aaccaagttgcttgggttctagtggcaaggagctcctttcaagggcgtacccggggaatactgggttcgatttccagggggacaacgcttggccagtgca 6018  T
Q  353 catgcatttacgcacgagccggattagtcg 382  Q
    ||||| | |||||| ||| || ||||||||    
T  6019 catgcctctacgcatgagacgaattagtcg 6048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 268 - 416
Target Start/End: Original strand, 319383 - 319532
Alignment:
Q  268 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgca 366  Q
    ||||||||||||| || |||||||||| ||||||| |||| ||| | | ||| |||||| | || |||||||| ||||||| ||||||| | | || |||    
T  319383 gctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgca 319482  T
Q  367 cgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
     |||| ||||||||||   | |||||||| | || ||||||||| |||||    
T  319483 tgagctggattagtcgtccacctttggtggggcggaaaccggtgcgaaag 319532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 416
Target Start/End: Complemental strand, 42918 - 42831
Alignment:
Q  329 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 416  Q
    ||||||||| | |||| || ||||||||| | ||| || ||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  42918 ggagaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 42831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 8873 - 8824
Alignment:
Q  253 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 302  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||    
T  8873 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtat 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University