View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1320_high_15 (Length: 502)
Name: NF1320_high_15
Description: NF1320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1320_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 487; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 487; E-Value: 0
Query Start/End: Original strand, 6 - 492
Target Start/End: Complemental strand, 32762774 - 32762288
Alignment:
| Q |
6 |
atttccattattaccactgctgttgttatgatcatcatctatgctatgacttcttgacttgaaagaacaattttttctaccacttaccaattcaagaagc |
105 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32762774 |
atttccattattaccactgctgttgttatgatcatcatctatgctatgacttcttgacttgaaagaacaattttttctaccacttaccaattcaagaagc |
32762675 |
T |
|
| Q |
106 |
accattccaaaactatatacatcagttttctcagaaattgctgaatttgtaagccattccggagcaagataaccacgagttcctctcattgttgtgaaca |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32762674 |
accattccaaaactatatacatcagttttctcagaaattgctgaatttgtaagccattccggagcaagataaccacgagttcctctcattgttgtgaaca |
32762575 |
T |
|
| Q |
206 |
aaccagattgttctggactaaggagtttcgaaagtccaaaatcagatatcttagcttgaaattgatcatgcagaagaatattctctggtttgatatcaca |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32762574 |
aaccagattgttctggactaaggagtttcgaaagtccaaaatcagatatcttagcttgaaattgatcatgcagaagaatattctctggtttgatatcaca |
32762475 |
T |
|
| Q |
306 |
gtgaattatcttttgctcacatccactgtgaagataagcgagtccgcgcgctgttccaagggccacatcacacctctcttgccattccaaaaccggatgt |
405 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32762474 |
gtgaattatcttttgctcacatccactgtgaagataagcgagtccgcgcgctgttccaagggccacatcacacctctcttgccattccaaaaccggatgt |
32762375 |
T |
|
| Q |
406 |
ccaccgaagaggttccggtcgagtgagccgcggttcatgtactcgtacaccaacattcggtgtcccctttgagcacaaaagcctttg |
492 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32762374 |
ccaccgaagaggttccggtcgagtgagccgcggttcatgtactcgtacaccaacattcggtgtcccctttgagcacaaaagcctttg |
32762288 |
T |
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