View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1320_high_33 (Length: 389)
Name: NF1320_high_33
Description: NF1320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1320_high_33 |
 | |
|
| [»] scaffold0274 (2 HSPs) |
| | |
|
| [»] scaffold0648 (1 HSPs) |
| | |
|
| [»] scaffold0640 (1 HSPs) |
| | |
|
| [»] scaffold0271 (1 HSPs) |
| | |
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Alignment Details
Target: chr3 (Bit Score: 178; Significance: 7e-96; HSPs: 29)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 19456662 - 19456923
Alignment:
| Q |
19 |
gaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattagga |
118 |
Q |
| |
|
|||| |||||||||||||| ||||||| ||| ||| || |||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
19456662 |
gaagatgatgactctataagagaatcaatgtttctcggcttgggagttggatttgcagtaggtttctgggggatttgtggttctttgtttcttattagga |
19456761 |
T |
|
| Q |
119 |
aatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcc |
218 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
19456762 |
aatggaggcatgcatacttttgggttatatatggagtgggtaacagggtctatgtaactttgatggtaaagttaaatagctttcgcagaaattgaactcc |
19456861 |
T |
|
| Q |
219 |
tgcagtaaaggttagtgaaactactttcagtttaagtgatgaaactatagagtatttagttt |
280 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |||| |||||||||||||||| |||| |
|
|
| T |
19456862 |
tgcagtaaaggttagtgaaactgctttcagtttaattgatcaaactatagagtattttgttt |
19456923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 19465723 - 19465939
Alignment:
| Q |
24 |
tgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattaggaaatgg |
123 |
Q |
| |
|
|||||| || ||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
19465723 |
tgatgaatcgataaaagaatcattgtatctaaggacgggagttggatttgcagcaggtttctgggggatttgtggttctttgtttcttattaggaaatgg |
19465822 |
T |
|
| Q |
124 |
aggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcct-gca |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
19465823 |
aggcatgcatactttcggtttatatatggaataggtgacaagctctatgttactttgacggtaaagttaaatagctttcgcagaaattgagctcctacca |
19465922 |
T |
|
| Q |
223 |
gtaaaggttagtgaaac |
239 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
19465923 |
gttaaggttagtgaaac |
19465939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 19394510 - 19394736
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || |
|
|
| T |
19394510 |
agaatgaagatgaagactctataaaagaatcattgtatctagggatgggagttggatttgcagtaggtttctgggggatttgtggttctttgtttcttat |
19394609 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattga |
213 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
19394610 |
taggaaatggaggcatgcatgctttcgggttatatatggagtaggtgacaagctctatgttattttgacggtaaagttaaatagctttcgcagaaattga |
19394709 |
T |
|
| Q |
214 |
gctcctg-cagtaaaggttagtgaaac |
239 |
Q |
| |
|
| ||||| || | |||||||||||||| |
|
|
| T |
19394710 |
ggtcctgccaattaaggttagtgaaac |
19394736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 24 - 285
Target Start/End: Original strand, 18017393 - 18017655
Alignment:
| Q |
24 |
tgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattaggaaatgg |
123 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
18017393 |
tgatgaatctataaaagaatcattgtatctaggcatgggagttggctttgcagcaggtttctgggggatttgtggttctttgtttctcattagaaaatgg |
18017492 |
T |
|
| Q |
124 |
aggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcctgc-a |
222 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||| ||| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||| | |
|
|
| T |
18017493 |
aggcatgcatattttcggtttatatatggagtgggtaacagactttatgtaactttgatggtaaagttaaatagctttcgtagaagttgagcttctgcta |
18017592 |
T |
|
| Q |
223 |
gtaaaggttagtgaaactactttcagtttaagtgatgaaactatagagtatttagttttattc |
285 |
Q |
| |
|
||||| |||||||| |||||| |||| || |||| | |||||||||||| ||||||||| |
|
|
| T |
18017593 |
ataaagattagtgaacgtactttaagttgaattgatcatgatatagagtattttgttttattc |
18017655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 14 - 272
Target Start/End: Original strand, 19382254 - 19382514
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||| ||||||| ||| || ||||||||||| |||||||||||||||| || |||||| |||||||||||||||||||| ||||| || |
|
|
| T |
19382254 |
agaatgaagatgatgaatctataatagagtcgttgtatctaggcatgggagttggatttggagtaggtttttgggggatttgtggttctttatttcttat |
19382353 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattga |
213 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
19382354 |
taggaaatggaggcatgcatactttcggtttatctatggagtaggtgacaagctctatgttattttgacggtaaagttaaatagctttcgcagaaattga |
19382453 |
T |
|
| Q |
214 |
gctcctg-cagtaaaggttagtgaaa-ctactttcagtttaagtgatgaaactatagagta |
272 |
Q |
| |
|
||| ||| |||| ||||||||||||| |||||| ||||| | | || ||||||||||||| |
|
|
| T |
19382454 |
gctgctgccagttaaggttagtgaaacctacttcaagttttattaatcaaactatagagta |
19382514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 31 - 221
Target Start/End: Complemental strand, 18872500 - 18872310
Alignment:
| Q |
31 |
tctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattaggaaatggaggcatg |
130 |
Q |
| |
|
||||||| ||||||| ||||||| || ||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
18872500 |
tctataagagaatcaatgtatcttggcatgggagttggatttgcagtaggtttctgggggatttgtggttctttgtttcttattaggaaatggaggcatg |
18872401 |
T |
|
| Q |
131 |
catactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcctgc |
221 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
18872400 |
catacttttggtttatatatggagtaggtgacaagctctatgttactttgatgataaagttaaatagctttcgcagatattgagctcctgc |
18872310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 19352753 - 19352960
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || |
|
|
| T |
19352753 |
agaatgaaggtgatgactccataaaagaatcattgtatctaggcatgggagttggatttgcagcaggtttctgggggatttgtggttctttgtttcttat |
19352852 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattga |
213 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||||||||| ||| ||| ||| ||||||||||| ||||||||||||||||||||||| |||| ||| |
|
|
| T |
19352853 |
tagaaaatggaggcatgcatattttcggtttatatatggagtgggtaacaggctttatgtaactttaatggtaaagttaaatagctttcgtagaatatga |
19352952 |
T |
|
| Q |
214 |
gctcctgc |
221 |
Q |
| |
|
||| |||| |
|
|
| T |
19352953 |
gcttctgc |
19352960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 24 - 275
Target Start/End: Original strand, 17951194 - 17951446
Alignment:
| Q |
24 |
tgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattaggaaatgg |
123 |
Q |
| |
|
|||||| ||| |||||||||||||||| || || |||||||| |||||||||| |||||| |||||||||||||||||||||||||| ||| | |||||| |
|
|
| T |
17951194 |
tgatgaatctctaaaagaatcattgtaccttggtatgggagtgggatttgcagtaggtttctgggggatttgtggttctttgtttcttattcgaaaatgg |
17951293 |
T |
|
| Q |
124 |
aggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcctgc-a |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||||| |||||| ||||||| |||| | |
|
|
| T |
17951294 |
aggcatgcatactttcggtttatatatggagtgggtaacaggctctatgtaactttgaaggtaaagttaaatagcttttgcagaagttgagcttctgcta |
17951393 |
T |
|
| Q |
223 |
gtaaaggttagtgaaactactttcagtttaagtgatgaaactatagagtattt |
275 |
Q |
| |
|
| ||||||||||||| ||||||| |||| || |||| | |||||||||||| |
|
|
| T |
17951394 |
gaaaaggttagtgaacctactttaagttgaattgatcacgatatagagtattt |
17951446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 17726176 - 17725989
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || |
|
|
| T |
17726176 |
agaatgaagatgatgactctatcaaagaatcattgtatctagggatgggagttggatttgcagtaggtttctgggggatttgtggttctttgtttcttat |
17726077 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagcttt |
201 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||| || |||||||||||||||||| |
|
|
| T |
17726076 |
tagaaaatggaggcatgcatacttttggtttattgatggagtaggtgacaagctctatgttactttaattgtaaagttaaatagcttt |
17725989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 19027405 - 19027218
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || |
|
|
| T |
19027405 |
agaatgaagatgatgactctatcaaagaatcattgtatctagggatgggagttggatttgcagtaggtttctgggggatttgtggttctttgtttcttat |
19027306 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagcttt |
201 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||| || |||||||||||||||||| |
|
|
| T |
19027305 |
tagaaaatggaggcatgcatacttttggtttattgatggagtaggtgacaagctctatgttactttaattgtaaagttaaatagcttt |
19027218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 19401087 - 19401324
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| ||| || |||||||||||||| ||||| || || |||||||| |||||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
19401087 |
agaatgaagatgacgaatctataaaagaatcgttgtaccttggcatgggagtgggatttgcagtaggtttctgggggatttgtggttctttgtttctcat |
19401186 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattga |
213 |
Q |
| |
|
||| ||||||||||||||||| |||||||| ||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
19401187 |
tagaaaatggaggcatgcatattttcggttcatatatggagtgggtaacaggctctatgtaactttgatggtaaagttaaatagctttcatagaagttga |
19401286 |
T |
|
| Q |
214 |
gctcctgc-agtaaaggttagtgaaactactttcagtt |
250 |
Q |
| |
|
||| ||| |||||||||||||||| ||| ||| |||| |
|
|
| T |
19401287 |
gcttttgctagtaaaggttagtgaacctaatttaagtt |
19401324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 24 - 250
Target Start/End: Original strand, 18109801 - 18110028
Alignment:
| Q |
24 |
tgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattaggaaatgg |
123 |
Q |
| |
|
|||||| |||||||||||||||||||| || || |||||||| |||||||||| |||||| |||||||||||||||||||||||| | || ||||||||| |
|
|
| T |
18109801 |
tgatgaatctataaaagaatcattgtaccttggtatgggagtgggatttgcagtaggtttctgggggatttgtggttctttgtttgttatcaggaaatgg |
18109900 |
T |
|
| Q |
124 |
aggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcctgc-a |
222 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||| ||| |||||||||||| |||||||||||||| ||||||||| || ||| ||||||| |||| | |
|
|
| T |
18109901 |
aggcatgcatactttcgttttatatatggagtgggtaacaggctctatgtaacattgatggtaaagttgaatagcttttgctgaagttgagcttctgcta |
18110000 |
T |
|
| Q |
223 |
gtaaaggttagtgaaactactttcagtt |
250 |
Q |
| |
|
||||||||||||||| ||| ||| |||| |
|
|
| T |
18110001 |
gtaaaggttagtgaacctaatttaagtt |
18110028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 14 - 216
Target Start/End: Original strand, 17943315 - 17943517
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||||||||||||||||||| |||| || || ||||| |||||||||||||||||||| |||||||||||||||||||||||| | || |
|
|
| T |
17943315 |
agaatgaagatgatgactctataaaagaatcactgtaccttggcatgggggttggatttgcagcaggtttttgggggatttgtggttctttgttttttat |
17943414 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattga |
213 |
Q |
| |
|
||| |||||||||||||||| |||||||||||| || |||| || ||||| |||||||| |||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
17943415 |
tagaaaatggaggcatgcatgctttcggtttattgatagagtgggcgacaaactctatgttactttgatcgtaaagttaaatagctttcgcagaaactga |
17943514 |
T |
|
| Q |
214 |
gct |
216 |
Q |
| |
|
||| |
|
|
| T |
17943515 |
gct |
17943517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 18166517 - 18166743
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| || |
|
|
| T |
18166517 |
agaatgaagatgatgactctataagagaatggttgtacctaggcatgggagttggatttgcagtaggtttctgggggatttgtggttctttgtttcttat |
18166616 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattga |
213 |
Q |
| |
|
||| |||||||| |||||||||||||||||||| || |||| ||||||||||||||||| ||||||| ||||||||||||||||||| |||||| ||| |
|
|
| T |
18166617 |
tagaaaatggagacatgcatactttcggtttattgatagagttggtgacaagctctatgttactttgaacgtaaagttaaatagctttctcagaaactga |
18166716 |
T |
|
| Q |
214 |
gctcctgc-agtaaaggttagtgaaac |
239 |
Q |
| |
|
| || ||| || |||||||||||||| |
|
|
| T |
18166717 |
gttcatgctggttaaggttagtgaaac |
18166743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 25 - 210
Target Start/End: Original strand, 25464425 - 25464610
Alignment:
| Q |
25 |
gatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattaggaaatgga |
124 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
25464425 |
gatgactctataaaagaatcattgtatctaggcttgggagttggatttgcaataggtttctgggggatttgtggttctttgttttttattaggaaatgga |
25464524 |
T |
|
| Q |
125 |
ggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaat |
210 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||| |||||||| |||||||| ||||||||||| ||||||||||||| |
|
|
| T |
25464525 |
ggcatgcatactttcggtttattaatggagtgagtgacaaactctatgttactttgatcgtaaagttaaaccactttcgcagaaat |
25464610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 34 - 221
Target Start/End: Original strand, 19377000 - 19377187
Alignment:
| Q |
34 |
ataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattaggaaatggaggcatgcat |
133 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
19377000 |
ataagagaatcattgtatctaggcatgggagttggatttgcagtaggtttctgggggatttgcggttctttgtttcttattaggaaatggaggcatgcat |
19377099 |
T |
|
| Q |
134 |
actttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcctgc |
221 |
Q |
| |
|
|||||| |||||| || ||||||||||||| |||||||| |||||||| ||||||||||| || |||| ||||||| ||||||||| |
|
|
| T |
19377100 |
actttcagtttattaatagagtaggtgacaaactctatgttactttgatcgtaaagttaaacaggtttcaaagaaattaagctcctgc |
19377187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 19335378 - 19335580
Alignment:
| Q |
19 |
gaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattagga |
118 |
Q |
| |
|
|||| ||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | |
|
|
| T |
19335378 |
gaagatgacgactctttaagagaatcattgtatctagggatgagagttggatttgcagcaggtttctgggggatttgtggttctttgtttcttattagaa |
19335477 |
T |
|
| Q |
119 |
aatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcc |
218 |
Q |
| |
|
||||||||||||| |||||||||||| | ||| |||| ||||||||| ||||||| |||||||| |||||||| || | ||| |||||||||||||| |
|
|
| T |
19335478 |
aatggaggcatgcttactttcggtttgtttatagagtgggtgacaagatctatgttactttgatcgtaaagttgaacatgtttaaaagaaattgagctcc |
19335577 |
T |
|
| Q |
219 |
tgc |
221 |
Q |
| |
|
||| |
|
|
| T |
19335578 |
tgc |
19335580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 28 - 235
Target Start/End: Complemental strand, 14895015 - 14894807
Alignment:
| Q |
28 |
gactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattaggaaatggaggc |
127 |
Q |
| |
|
|||||||||| ||||||| ||||||| || |||||| |||||||||||| |||||| |||||||||| ||||||||||||||| ||||| |||||||||| |
|
|
| T |
14895015 |
gactctataagagaatcaatgtatcttggcatgggaattggatttgcagtaggtttttgggggatttctggttctttgtttcttattagaaaatggaggc |
14894916 |
T |
|
| Q |
128 |
atgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcctgc-agtaa |
226 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| | |||| | | |||||||||||| || ||| | |
|
|
| T |
14894915 |
atgcatactttcggtttattgatggagtaggtgacaagctctatgttactttgatcccaaagttaaacaactttggaaaaaattgagctccggctagtta |
14894816 |
T |
|
| Q |
227 |
aggttagtg |
235 |
Q |
| |
|
||||||||| |
|
|
| T |
14894815 |
aggttagtg |
14894807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 35 - 316
Target Start/End: Original strand, 16678589 - 16678871
Alignment:
| Q |
35 |
taaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattaggaaatggaggcatgcata |
134 |
Q |
| |
|
||||||||||||||||||| || |||||||||| ||||| | |||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
16678589 |
taaaagaatcattgtatctgggcttgggagttggttttgcggtaggtttctggggtatttgtggttctttgtttcttattaggaaatggaggcacacata |
16678688 |
T |
|
| Q |
135 |
ctttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcct-gcagtaaaggttag |
233 |
Q |
| |
|
|| || ||||| ||||||| || |||||||| |||||||||||||||||||||||||||| ||||| ||||| ||||| |||| ||| |||||||| |
|
|
| T |
16678689 |
ctatcaatttattgatggagtgggcgacaagctgtatgtaactttgatggtaaagttaaataactttcacagaagttgagttcctaatagtgaaggttag |
16678788 |
T |
|
| Q |
234 |
tgaaactactttcagtttaagtgatgaaactatagagtatttagttttattcataatttatctatgacatatttcattgatca |
316 |
Q |
| |
|
|| | ||| ||| ||||| | | || ||||||||||||| || ||| ||||| || ||||| |||||||| ||| |||||||| |
|
|
| T |
16678789 |
tggacctattttaagttttattaatcaaactatagagtaatttgttgtattcgtagtttatgtatgacatcttttattgatca |
16678871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 18117317 - 18117517
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||| ||||||| ||| |||||||||||||| |||||||| |||||||||| |||||| |||||||||||||||||| ||||||| || |
|
|
| T |
18117317 |
agaatgaagatgatgaatctataagagagtcattgtatctaggcatgggagtgggatttgcagtaggtttctgggggatttgtggttctatgtttcttat |
18117416 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattga |
213 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | || |||| |||||| | |||||||| |||||||| ||||||||||||||||||||| |||| ||| |
|
|
| T |
18117417 |
taggaaatggaggcatgcgtactttcggttagttgatagagtgggtgactatctctatgttactttgatcgtaaagttaaatagctttcgctgaaactga |
18117516 |
T |
|
| Q |
214 |
g |
214 |
Q |
| |
|
| |
|
|
| T |
18117517 |
g |
18117517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 19426051 - 19426231
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| || || |
|
|
| T |
19426051 |
agaatgaagatgatgactctatcaaagaatcattgtatctagggatgggagttggatttgcagtaggtttctgggggatttgtggttctttgttccttat |
19426150 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaa |
194 |
Q |
| |
|
||| ||||||| ||||||||||||||||||| | || |||| |||| ||| ||||||| |||||||| ||||||||||| |
|
|
| T |
19426151 |
tagaaaatggaagcatgcatactttcggtttgttgatagagtgcgtgataagatctatgttactttgatcgtaaagttaaa |
19426231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 18148179 - 18148405
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||| ||||||| ||| || |||||| |||| |||||||| |||||||||| |||||| |||||||||||||||||||||||||| || |
|
|
| T |
18148179 |
agaatgaagatgatgaatctataagagagtcgttgtatttaggcatgggagtgggatttgcagtaggtttctgggggatttgtggttctttgtttcttat |
18148278 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattga |
213 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | || |||| |||||| | |||||||| ||| |||| ||||||||||||||||||||| ||| ||| |
|
|
| T |
18148279 |
taggaaatggaggcatgcgtactttcggttagttgatagagtgggtgactatctctatgttactgtgatcgtaaagttaaatagctttcgccgaagctga |
18148378 |
T |
|
| Q |
214 |
gctcctgc-agtaaaggttagtgaaac |
239 |
Q |
| |
|
|||||||| ||| ||||||||| |||| |
|
|
| T |
18148379 |
gctcctgctagttaaggttagttaaac |
18148405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 19355081 - 19355283
Alignment:
| Q |
19 |
gaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattagga |
118 |
Q |
| |
|
|||| ||| |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||| | |
|
|
| T |
19355081 |
gaagatgacgactctatcaaagaatcattgtatctaggcatgggagttggatttgcagtaggtttctgggggatttgccgttctttgtttctaattagaa |
19355180 |
T |
|
| Q |
119 |
aatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcc |
218 |
Q |
| |
|
|||||||||||||||||||||||||| | || |||| |||||||| ||||||| |||||||| ||||||||||| | ||| |||||||||||||| |
|
|
| T |
19355181 |
aatggaggcatgcatactttcggtttgttgatagagtgcgtgacaagatctatgttactttgatcgtaaagttaaacgggtttaaaagaaattgagctcc |
19355280 |
T |
|
| Q |
219 |
tgc |
221 |
Q |
| |
|
||| |
|
|
| T |
19355281 |
tgc |
19355283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 19462541 - 19462767
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||| ||||||| ||| || |||||| |||| |||||||| |||||||||| |||||| ||||| |||||||||||||||||||| || |
|
|
| T |
19462541 |
agaatgaagatgatgaatctataagagagtcgttgtatttaggcatgggagtgggatttgcagtaggtttctggggcatttgtggttctttgtttcttat |
19462640 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattga |
213 |
Q |
| |
|
| |||||||||||||||| ||||||||||| | || |||| |||||| |||||||| ||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
19462641 |
tcggaaatggaggcatgcgtactttcggttagttgatagagtgggtgactttctctatgttactttgaccgtaaagttaaatagctttcgcagaaactga |
19462740 |
T |
|
| Q |
214 |
gctcctgc-agtaaaggttagtgaaac |
239 |
Q |
| |
|
|||||||| ||| ||||||||| |||| |
|
|
| T |
19462741 |
gctcctgctagttaaggttagttaaac |
19462767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 24 - 234
Target Start/End: Original strand, 18104867 - 18105078
Alignment:
| Q |
24 |
tgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattaggaaatgg |
123 |
Q |
| |
|
|||||| ||||||| ||| || |||||| |||| |||||||| |||||||||| ||| || | |||||||| |||||| ||||||| |||||||||||| |
|
|
| T |
18104867 |
tgatgaatctataagagagtcgttgtatttaggcatgggagtgggatttgcagtaggattcttggggattttcggttctatgtttcttattaggaaatgg |
18104966 |
T |
|
| Q |
124 |
aggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcctgc-a |
222 |
Q |
| |
|
|||||||||||||||||||| | || |||| |||||| | |||||||| |||||||| ||||||||||||||||||||| |||| ||||||||||| | |
|
|
| T |
18104967 |
aggcatgcatactttcggttagttaatagagtgggtgactatctctatgttactttgatcgtaaagttaaatagctttcgccgaaactgagctcctgcta |
18105066 |
T |
|
| Q |
223 |
gtaaaggttagt |
234 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
18105067 |
gttaaggttagt |
18105078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 216
Target Start/End: Original strand, 19415557 - 19415747
Alignment:
| Q |
26 |
atgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattaggaaatggag |
125 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||| |||||||| |||||||||| |||||| |||||||||||||||||| | ||||| ||||| ||||| || |
|
|
| T |
19415557 |
atgattctatgaaagattcattgtatctaggaatgggagtgggatttgcagtaggtttctgggggatttgtggttctatttttcttattagaaaatgcag |
19415656 |
T |
|
| Q |
126 |
gcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagct |
216 |
Q |
| |
|
|||||||||||| |||||||| || |||| | | ||| |||||||| |||||| | |||||||||||||||||||||||||| |||||| |
|
|
| T |
19415657 |
gcatgcatacttccggtttattgatagagtggccggcaatctctatgttactttggtcgtaaagttaaatagctttcgcagaaactgagct |
19415747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 204
Target Start/End: Original strand, 19438307 - 19438497
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||| ||||||| ||| || ||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||| ||||||| || |
|
|
| T |
19438307 |
agaatgaagatgatgaatctataagagagtcgttgtatctaggcatgggagttggatttgcagtaggtttttgggggatttgtggttctatgtttcttat |
19438406 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgc |
204 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | || ||| ||||| | || ||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
19438407 |
taggaaatggaggcatgcgtactttcggttagttgatacagtgtgtgactatctttatgttactttgatagtaaagttaaatagctttcgc |
19438497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 234
Target Start/End: Complemental strand, 24493377 - 24493200
Alignment:
| Q |
56 |
ggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattaggaaatggaggcatgcatactttcggtttatatatggagt |
155 |
Q |
| |
|
||||||||||||| |||| || |||||| ||| ||| |||||| |||| ||||| ||||||||||||||||| || |||| |||||||| ||||||| |
|
|
| T |
24493377 |
ggatgggagttgggtttggagtaggtttttggttgatgtgtggtcctttatttcttattaggaaatggaggcacgcgtactaccggtttatcgatggagt |
24493278 |
T |
|
| Q |
156 |
aggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcctgc-agtaaaggttagt |
234 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||||| ||||||||| |||||| |||| |||||| ||| ||||||||| |
|
|
| T |
24493277 |
gggtgacaggatctatgtaactttgatggtgaagtt--atagctttcacagaaaatgagttcctgctagttaaggttagt |
24493200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 50 - 221
Target Start/End: Complemental strand, 24496823 - 24496662
Alignment:
| Q |
50 |
atctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattaggaaatggaggcatgcatactttcggtttatata |
149 |
Q |
| |
|
||||||| |||||||||||||||| | |||||| ||| ||| |||||| ||||||||| |||||||||||| ||||| |||||| || |||||| | |
|
|
| T |
24496823 |
atctaggcatgggagttggatttggaataggtttctggttgatctgtggtcctttgtttcgtattaggaaatgg-ggcatacatactatcagtttatcga |
24496725 |
T |
|
| Q |
150 |
tggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcctgc |
221 |
Q |
| |
|
|| |||||||||||||||||||||||||||| ||||||| |||| | ||||||||||||||| |
|
|
| T |
24496724 |
tg---------acaagctctatgtaactttgatggtaaatttaaataattttcactaaaattgagctcctgc |
24496662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 168; Significance: 6e-90; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 14 - 316
Target Start/End: Original strand, 8460927 - 8461230
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||| || |
|
|
| T |
8460927 |
agaatgaagatgatgactctataagagaatcattgtatcttggcatgggagttggatttgcagtgggtttttgggggatttgtggttctttgtttcttat |
8461026 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattga |
213 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||| ||||| | |||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
8461027 |
taggaaatggaggcatgcatactatcgatttattgatggaatgggtgacaagctctatggaattttgatggtaaagttaattagatttcgcagaaattga |
8461126 |
T |
|
| Q |
214 |
gctcctgc-agtaaaggttagtgaaactactttcagtttaagtgatgaaactatagagtatttagttttattcataatttatctatgacatatttcattg |
312 |
Q |
| |
|
|||||||| || ||||||||||||| ||||||| ||||| | ||| | || ||||| ||||| ||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
8461127 |
gctcctgctagcaaaggttagtgaacctactttaagttttattgaacacaccatagaatattttgttttatgcataatttatctatgacatgtttcattg |
8461226 |
T |
|
| Q |
313 |
atca |
316 |
Q |
| |
|
|||| |
|
|
| T |
8461227 |
atca |
8461230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 135; Significance: 3e-70; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 31 - 338
Target Start/End: Complemental strand, 2709195 - 2708889
Alignment:
| Q |
31 |
tctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcattaggaaatggaggcatg |
130 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||||||||| ||||||||||||||| | |
|
|
| T |
2709195 |
tctataagagaatcattgtatctaggcatgggagttggatttgcagtaggtttttgggggatttgtggtcctttgtttcttattaggaaatggaggaaca |
2709096 |
T |
|
| Q |
131 |
catactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattgagctcctgc-agtaaagg |
229 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||||| ||||| || | ||| |||| |
|
|
| T |
2709095 |
catactatcggtttattgatggagtaggtgacaagctctatgtaactttgatgataaagttaaacaactttcatagaaatcgagcttctacaagttaagg |
2708996 |
T |
|
| Q |
230 |
ttagtgaaactactt-tcagtttaagtgatgaaactatagagtatttagttttattcataatttatctatgacatatttcattgatcagagactatagag |
328 |
Q |
| |
|
|||||||| |||||| |||||| | |||| |||||||| | ||||| |||||||||| ||| ||| |||||||| ||| ||||||| | |||| |||| |
|
|
| T |
2708995 |
ttagtgaacctacttcacagttt-attgatcaaactatacaatattttgttttattcacaatatatgtatgacatgttttattgatc--aaactagagag |
2708899 |
T |
|
| Q |
329 |
tattttgttt |
338 |
Q |
| |
|
|||||||||| |
|
|
| T |
2708898 |
tattttgttt |
2708889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 15536894 - 15537101
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||| || |
|
|
| T |
15536894 |
agaatgaagatgatgactctaacaaagaatcattgtatctagggatgggagttggatttgcggtaggtttctgggggatttgtggttctttgtttcttat |
15536993 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattga |
213 |
Q |
| |
|
||| |||||||||||||||||||||||||||| || ||||||||||||| ||||||| |||||||| ||||||||||| | |||| |||||||||| |
|
|
| T |
15536994 |
tagaaaatggaggcatgcatactttcggtttactgataaagtaggtgacaagatctatgttactttgatcgtaaagttaaacatgtttcacagaaattga |
15537093 |
T |
|
| Q |
214 |
gctcctgc |
221 |
Q |
| |
|
|||||||| |
|
|
| T |
15537094 |
gctcctgc |
15537101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 14 - 216
Target Start/End: Complemental strand, 13665587 - 13665385
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| ||| ||||||||||||||||||||| | || || ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| || |
|
|
| T |
13665587 |
agaatgaagatgacgactctataaaagaatcattgaaccttggcatgggggttggatttgcagcaggtttctgggggatatgtggttctttgtttcttat |
13665488 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaatagctttcgcagaaattga |
213 |
Q |
| |
|
||| |||||||||||||||| |||||||||| | || |||| || ||||| |||||| | |||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
13665487 |
tagaaaatggaggcatgcatgctttcggttttttgatagagtgggcgacaatctctatattactttgatggtaaagttaaatagctttcgcaggaactga |
13665388 |
T |
|
| Q |
214 |
gct |
216 |
Q |
| |
|
||| |
|
|
| T |
13665387 |
gct |
13665385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 21947 - 22127
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||||||| |||||| ||||||||||| || ||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||| |
|
|
| T |
21947 |
agaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgggggatttttggttctttgtttctcat |
22046 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaa |
194 |
Q |
| |
|
|| ||||||||||||||||||| ||||||||| || |||| ||||||||||||||||| |||| ||| ||||||||||| |
|
|
| T |
22047 |
tacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagttaaa |
22127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 2209 - 2029
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||||||| |||||| ||||||||||| || ||||| |||||||||||| ||||| |||||||||| ||||||||||||||||| |
|
|
| T |
2209 |
agaatgaagatgatgactctgcaaaagagtcattgtatcttggcatggggattggatttgcagttggtttctgggggattttcggttctttgtttctcat |
2110 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaa |
194 |
Q |
| |
|
|| ||||||||||||||||||| ||||||||| || |||| ||||||||||||||||| |||| ||| ||||||||||| |
|
|
| T |
2109 |
tacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagttaaa |
2029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 2739 - 2558
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatggggg-atttgtggttctttgtttctca |
112 |
Q |
| |
|
|||| |||| |||||||||| |||||| ||||||||||| || ||||| ||||||||||||| ||||| |||||| |||| ||||||||||||||||| |
|
|
| T |
2739 |
agaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgggggtatttttggttctttgtttctca |
2640 |
T |
|
| Q |
113 |
ttaggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaa |
194 |
Q |
| |
|
||| ||||||||||||||||||| ||||||||| || |||| ||||||||||||||||| |||| ||| ||||||||||| |
|
|
| T |
2639 |
ttacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagttaaa |
2558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 6764 - 6944
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||||||| |||||| ||||||||||| || ||||| |||||||||||| ||||| |||||||||| ||||||||||||||||| |
|
|
| T |
6764 |
agaatgaagatgatgactctgcaaaagagtcattgtatcttggcatggggattggatttgcagttggtttctgggggattttcggttctttgtttctcat |
6863 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaa |
194 |
Q |
| |
|
|| ||||||||||||||||||| ||||||||| || |||| ||||||||||||||||| |||| ||| ||||||||||| |
|
|
| T |
6864 |
tacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagttaaa |
6944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0271 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0271
Description:
Target: scaffold0271; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 11862 - 12042
Alignment:
| Q |
14 |
agaacgaaggtgatgactctataaaagaatcattgtatctagggatgggagttggatttgcagcaggtttatgggggatttgtggttctttgtttctcat |
113 |
Q |
| |
|
|||| |||| |||||||||| |||||| ||||||||||| || ||||| |||||||||||| ||||| |||||||||| ||||||||||||||||| |
|
|
| T |
11862 |
agaatgaagatgatgactctgcaaaagagtcattgtatcttggcatggggattggatttgcagttggtttctgggggattttcggttctttgtttctcat |
11961 |
T |
|
| Q |
114 |
taggaaatggaggcatgcatactttcggtttatatatggagtaggtgacaagctctatgtaactttgatggtaaagttaaa |
194 |
Q |
| |
|
|| ||||||||||||||||||| ||||||||| || |||| ||||||||||||||||| |||| ||| ||||||||||| |
|
|
| T |
11962 |
tacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagttaaa |
12042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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