View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1320_high_41 (Length: 355)
Name: NF1320_high_41
Description: NF1320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1320_high_41 |
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Alignment Details
Target: chr2 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 3 - 326
Target Start/End: Original strand, 43662710 - 43663033
Alignment:
| Q |
3 |
tggaggagcagagaggcttggttttaatcattttcaacctaaaaactcagaaaactgggatgtgcaaattatgaatccatcttcaagagttccttttatg |
102 |
Q |
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| T |
43662710 |
tggagaagaagagagacttggttttaatcattttcaacctaaaaactcagaaaactgggatgtgcaaattatgaatccatcttcaagagttccttttatg |
43662809 |
T |
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| Q |
103 |
gatataataaagcatgaagtttctcaaggtgagaatttttatggccaacaagggcatcatcatgaggagtttcatgctaactctggatcacttggttcat |
202 |
Q |
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| T |
43662810 |
gatataataaagcatgaagtttctcaaggtgagaatttttatggccaacaagggcatcatcatgaggagtttcatgctaactctggatcacttggttcat |
43662909 |
T |
|
| Q |
203 |
cttggtcacatatggtgccagtttcttctccaagctctcatatcactagcttaagtagtgataatatattggatttcacttacaacaaggtagatcaaag |
302 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
43662910 |
cttggtcacatatggtgccagtttcttctccaagctctcatatcactagcttaagtagtgataatatattggatttcacttacaacaaggtagatcatag |
43663009 |
T |
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| Q |
303 |
caagaatcaactaccagatcaaat |
326 |
Q |
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|||||||||||||||||||||||| |
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| T |
43663010 |
caagaatcaactaccagatcaaat |
43663033 |
T |
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