View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1320_high_7 (Length: 567)

Name: NF1320_high_7
Description: NF1320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1320_high_7
NF1320_high_7
[»] chr8 (32 HSPs)
chr8 (233-559)||(34723512-34723827)
chr8 (174-243)||(34724239-34724308)
chr8 (274-436)||(15884556-15884718)
chr8 (274-437)||(43027252-43027416)
chr8 (274-403)||(8141049-8141179)
chr8 (268-437)||(14666070-14666240)
chr8 (274-437)||(2467117-2467281)
chr8 (274-437)||(6100419-6100583)
chr8 (274-437)||(8997543-8997707)
chr8 (274-393)||(38922457-38922577)
chr8 (278-431)||(18373961-18374115)
chr8 (269-437)||(45521111-45521279)
chr8 (279-437)||(43032853-43033012)
chr8 (274-404)||(44893310-44893441)
chr8 (274-404)||(583761-583890)
chr8 (274-403)||(10927553-10927683)
chr8 (274-403)||(24837189-24837319)
chr8 (278-437)||(17981392-17981552)
chr8 (274-436)||(7673657-7673816)
chr8 (28-67)||(34724413-34724452)
chr8 (274-359)||(17845680-17845764)
chr8 (274-378)||(34613836-34613941)
chr8 (353-437)||(2964103-2964187)
chr8 (274-437)||(16893884-16894046)
chr8 (278-404)||(44031467-44031599)
chr8 (274-404)||(13085471-13085602)
chr8 (278-404)||(33401831-33401958)
chr8 (274-399)||(1013014-1013140)
chr8 (353-403)||(13357989-13358039)
chr8 (372-437)||(22212514-22212579)
chr8 (389-437)||(16291202-16291250)
chr8 (353-437)||(26570951-26571035)
[»] chr4 (49 HSPs)
chr4 (274-402)||(24166398-24166527)
chr4 (274-437)||(38165975-38166139)
chr4 (274-403)||(1446774-1446904)
chr4 (274-439)||(2559255-2559421)
chr4 (274-403)||(29895735-29895865)
chr4 (274-399)||(53599008-53599134)
chr4 (274-431)||(1940782-1940937)
chr4 (274-437)||(47078406-47078570)
chr4 (289-404)||(15839967-15840082)
chr4 (274-439)||(27248376-27248540)
chr4 (274-404)||(48317307-48317438)
chr4 (274-403)||(43458561-43458691)
chr4 (277-401)||(29588687-29588812)
chr4 (278-437)||(5472847-5473007)
chr4 (306-437)||(42722576-42722708)
chr4 (296-403)||(49260698-49260806)
chr4 (274-404)||(3574478-3574609)
chr4 (307-437)||(7246645-7246776)
chr4 (274-436)||(13073486-13073649)
chr4 (306-437)||(21192622-21192752)
chr4 (274-404)||(41162914-41163045)
chr4 (287-437)||(47682381-47682531)
chr4 (275-404)||(49952178-49952308)
chr4 (295-404)||(55005338-55005448)
chr4 (353-437)||(17080071-17080155)
chr4 (274-437)||(55920982-55921146)
chr4 (274-436)||(33647669-33647832)
chr4 (285-404)||(36262799-36262917)
chr4 (289-403)||(295566-295680)
chr4 (290-403)||(20354601-20354715)
chr4 (336-404)||(20532441-20532510)
chr4 (289-436)||(40780861-40781009)
chr4 (309-431)||(3159474-3159597)
chr4 (274-404)||(12703577-12703708)
chr4 (360-439)||(14567274-14567353)
chr4 (290-403)||(20128273-20128387)
chr4 (274-399)||(38075381-38075507)
chr4 (274-323)||(19651559-19651608)
chr4 (279-399)||(20421727-20421847)
chr4 (353-425)||(8424582-8424654)
chr4 (274-437)||(8888970-8889134)
chr4 (353-437)||(14124044-14124128)
chr4 (353-437)||(30317261-30317345)
chr4 (307-401)||(48015108-48015203)
chr4 (372-439)||(54946296-54946363)
chr4 (350-404)||(50485968-50486022)
chr4 (274-311)||(4736545-4736582)
chr4 (338-437)||(4738630-4738730)
chr4 (274-330)||(38841472-38841528)
[»] chr6 (22 HSPs)
chr6 (274-437)||(14107357-14107521)
chr6 (274-437)||(21898595-21898759)
chr6 (274-403)||(2271336-2271464)
chr6 (274-403)||(29333172-29333301)
chr6 (274-437)||(5253222-5253386)
chr6 (274-439)||(8938658-8938824)
chr6 (296-437)||(12606399-12606541)
chr6 (277-437)||(3601034-3601195)
chr6 (353-437)||(9633624-9633708)
chr6 (339-431)||(13391299-13391391)
chr6 (353-437)||(30788852-30788936)
chr6 (277-403)||(13036037-13036164)
chr6 (274-403)||(19230592-19230720)
chr6 (274-426)||(29444775-29444928)
chr6 (274-437)||(8611973-8612137)
chr6 (273-437)||(19089444-19089609)
chr6 (274-322)||(5759575-5759623)
chr6 (274-437)||(6606096-6606260)
chr6 (274-437)||(8932608-8932772)
chr6 (274-437)||(8944074-8944238)
chr6 (350-437)||(5029841-5029928)
chr6 (306-437)||(12635793-12635925)
[»] chr1 (43 HSPs)
chr1 (274-403)||(5855466-5855596)
chr1 (274-437)||(10422732-10422896)
chr1 (290-403)||(14254302-14254416)
chr1 (274-427)||(40288487-40288641)
chr1 (289-437)||(9659179-9659327)
chr1 (274-437)||(17642004-17642168)
chr1 (274-437)||(11397889-11398052)
chr1 (274-403)||(49078058-49078188)
chr1 (274-437)||(26660082-26660245)
chr1 (278-437)||(32150922-32151082)
chr1 (278-437)||(43959821-43959981)
chr1 (274-403)||(2980965-2981095)
chr1 (274-403)||(17092511-17092641)
chr1 (338-439)||(50371832-50371934)
chr1 (281-437)||(16956417-16956574)
chr1 (269-437)||(18915806-18915975)
chr1 (274-403)||(46929772-46929901)
chr1 (274-402)||(48798105-48798234)
chr1 (274-437)||(8763935-8764099)
chr1 (338-430)||(21849212-21849304)
chr1 (274-437)||(33004015-33004179)
chr1 (275-437)||(41663856-41664019)
chr1 (290-403)||(30927761-30927875)
chr1 (274-403)||(33418149-33418279)
chr1 (277-403)||(47312933-47313059)
chr1 (277-439)||(2567223-2567386)
chr1 (274-428)||(15465909-15466064)
chr1 (338-437)||(44969673-44969772)
chr1 (355-437)||(37339846-37339928)
chr1 (352-437)||(10172971-10173056)
chr1 (291-399)||(10336477-10336586)
chr1 (274-437)||(26325756-26325920)
chr1 (362-437)||(4581682-4581757)
chr1 (278-403)||(32819-32945)
chr1 (338-403)||(13262091-13262157)
chr1 (278-439)||(14357703-14357865)
chr1 (338-403)||(16263553-16263619)
chr1 (274-398)||(34877934-34878059)
chr1 (293-437)||(45361882-45362027)
chr1 (294-401)||(17358507-17358615)
chr1 (353-401)||(28416970-28417018)
chr1 (272-431)||(31576553-31576713)
chr1 (274-326)||(40226354-40226406)
[»] chr7 (44 HSPs)
chr7 (269-400)||(4195238-4195370)
chr7 (276-437)||(34659174-34659336)
chr7 (274-437)||(48804629-48804793)
chr7 (274-431)||(5039423-5039581)
chr7 (274-437)||(43346778-43346942)
chr7 (274-437)||(43861971-43862135)
chr7 (277-431)||(1797409-1797564)
chr7 (274-431)||(16802069-16802227)
chr7 (274-403)||(17748415-17748545)
chr7 (277-437)||(5069814-5069975)
chr7 (274-437)||(22993366-22993530)
chr7 (274-404)||(4228786-4228914)
chr7 (274-431)||(13095804-13095962)
chr7 (353-439)||(38578864-38578950)
chr7 (274-403)||(47341822-47341952)
chr7 (274-439)||(22573759-22573924)
chr7 (274-437)||(10047875-10048039)
chr7 (290-399)||(42210299-42210409)
chr7 (274-401)||(43925458-43925586)
chr7 (277-328)||(11607080-11607131)
chr7 (274-436)||(26423288-26423450)
chr7 (338-440)||(27028289-27028392)
chr7 (274-404)||(19914735-19914865)
chr7 (293-370)||(45853586-45853664)
chr7 (354-403)||(3353451-3353500)
chr7 (274-430)||(21530694-21530851)
chr7 (353-437)||(4705983-4706067)
chr7 (289-404)||(14535252-14535368)
chr7 (274-437)||(14650263-14650427)
chr7 (306-437)||(21190779-21190911)
chr7 (274-377)||(22268088-22268192)
chr7 (337-416)||(23658188-23658268)
chr7 (370-430)||(28396166-28396226)
chr7 (294-437)||(36619253-36619397)
chr7 (306-437)||(37514899-37515031)
chr7 (357-437)||(41945503-41945583)
chr7 (274-404)||(45960035-45960165)
chr7 (338-403)||(30827302-30827368)
chr7 (383-437)||(34127644-34127698)
chr7 (273-401)||(42032041-42032170)
chr7 (338-437)||(1605951-1606051)
chr7 (353-437)||(8734685-8734769)
chr7 (277-437)||(24969325-24969484)
chr7 (274-322)||(34127735-34127783)
[»] chr3 (50 HSPs)
chr3 (274-437)||(13893869-13894033)
chr3 (274-437)||(7328787-7328950)
chr3 (274-437)||(15320129-15320293)
chr3 (274-403)||(33251605-33251735)
chr3 (274-437)||(29127862-29128026)
chr3 (274-437)||(54261169-54261333)
chr3 (274-403)||(45877397-45877527)
chr3 (274-431)||(55069685-55069843)
chr3 (353-437)||(26361967-26362051)
chr3 (278-437)||(28572211-28572371)
chr3 (277-403)||(6462358-6462485)
chr3 (274-404)||(10855327-10855458)
chr3 (296-431)||(15795500-15795635)
chr3 (274-437)||(47749105-47749268)
chr3 (274-404)||(51682987-51683118)
chr3 (274-403)||(3755513-3755643)
chr3 (274-396)||(10040500-10040622)
chr3 (274-404)||(39849015-39849145)
chr3 (274-437)||(7310703-7310867)
chr3 (353-436)||(3507534-3507617)
chr3 (274-404)||(42412807-42412938)
chr3 (274-403)||(26207835-26207965)
chr3 (274-439)||(35315899-35316065)
chr3 (274-402)||(29135856-29135985)
chr3 (353-437)||(8164576-8164660)
chr3 (274-405)||(28242221-28242353)
chr3 (274-437)||(41630512-41630676)
chr3 (279-390)||(49082772-49082884)
chr3 (274-440)||(29762152-29762319)
chr3 (382-437)||(47164158-47164213)
chr3 (274-403)||(25294903-25295033)
chr3 (274-375)||(50682420-50682522)
chr3 (338-426)||(30767258-30767347)
chr3 (275-399)||(41219537-41219661)
chr3 (338-429)||(26043819-26043911)
chr3 (370-430)||(43330739-43330799)
chr3 (353-404)||(7648763-7648814)
chr3 (382-437)||(36043674-36043729)
chr3 (278-427)||(22405553-22405703)
chr3 (350-400)||(34460547-34460597)
chr3 (353-431)||(35923629-35923707)
chr3 (274-403)||(49198294-49198424)
chr3 (306-399)||(52364838-52364932)
chr3 (352-437)||(15084945-15085030)
chr3 (293-437)||(47219106-47219251)
chr3 (354-431)||(50405609-50405686)
chr3 (338-401)||(4638161-4638225)
chr3 (338-437)||(7650234-7650334)
chr3 (274-322)||(48341963-48342011)
chr3 (274-322)||(52011084-52011132)
[»] chr2 (52 HSPs)
chr2 (274-437)||(7747217-7747381)
chr2 (274-403)||(22593078-22593207)
chr2 (274-437)||(10026615-10026779)
chr2 (274-437)||(18902529-18902693)
chr2 (274-437)||(38005345-38005509)
chr2 (277-431)||(21286390-21286545)
chr2 (274-404)||(29653571-29653701)
chr2 (278-431)||(7787003-7787157)
chr2 (274-402)||(13026445-13026574)
chr2 (277-425)||(45263678-45263827)
chr2 (274-437)||(331444-331608)
chr2 (290-437)||(25540403-25540551)
chr2 (274-428)||(42770659-42770814)
chr2 (274-437)||(44945537-44945700)
chr2 (274-439)||(2550811-2550977)
chr2 (274-403)||(29422158-29422288)
chr2 (272-439)||(6358148-6358316)
chr2 (274-437)||(8410074-8410238)
chr2 (306-437)||(10823035-10823167)
chr2 (291-437)||(41220595-41220742)
chr2 (317-403)||(35946725-35946811)
chr2 (274-431)||(39201513-39201671)
chr2 (272-437)||(44139425-44139591)
chr2 (277-437)||(37560119-37560280)
chr2 (338-437)||(12455317-12455417)
chr2 (274-437)||(12864167-12864331)
chr2 (273-440)||(38962705-38962873)
chr2 (274-404)||(21180346-21180477)
chr2 (354-439)||(9360745-9360830)
chr2 (338-431)||(24179576-24179669)
chr2 (274-437)||(2528340-2528504)
chr2 (274-437)||(14169608-14169772)
chr2 (274-404)||(15079426-15079557)
chr2 (293-439)||(16034899-16035046)
chr2 (289-403)||(25549686-25549801)
chr2 (274-436)||(20612534-20612699)
chr2 (338-403)||(34130335-34130400)
chr2 (353-437)||(27725963-27726047)
chr2 (274-437)||(41031905-41032068)
chr2 (274-436)||(10046477-10046639)
chr2 (278-349)||(20963198-20963268)
chr2 (274-364)||(29697467-29697558)
chr2 (269-387)||(40968964-40969083)
chr2 (272-437)||(3811690-3811856)
chr2 (289-403)||(16813198-16813312)
chr2 (289-403)||(16852477-16852591)
chr2 (339-402)||(28525489-28525554)
chr2 (274-399)||(34356149-34356275)
chr2 (289-402)||(39806919-39807033)
chr2 (350-431)||(10669612-10669693)
chr2 (274-323)||(23500795-23500844)
chr2 (341-428)||(26805306-26805394)
[»] chr5 (47 HSPs)
chr5 (274-403)||(9168286-9168414)
chr5 (274-401)||(38897754-38897881)
chr5 (274-437)||(1538375-1538539)
chr5 (274-437)||(5731919-5732083)
chr5 (273-403)||(19572667-19572798)
chr5 (289-439)||(25417180-25417331)
chr5 (274-403)||(37263185-37263314)
chr5 (274-403)||(41163493-41163622)
chr5 (274-437)||(9812816-9812980)
chr5 (274-437)||(42086271-42086435)
chr5 (307-437)||(12081885-12082016)
chr5 (274-431)||(3653919-3654075)
chr5 (274-437)||(5079275-5079438)
chr5 (274-437)||(12704958-12705122)
chr5 (274-413)||(26077085-26077225)
chr5 (274-404)||(7866525-7866656)
chr5 (315-437)||(40117400-40117523)
chr5 (354-431)||(6764462-6764539)
chr5 (273-437)||(8513462-8513627)
chr5 (274-377)||(16755005-16755109)
chr5 (284-328)||(28862779-28862823)
chr5 (290-349)||(18327730-18327789)
chr5 (274-399)||(20682654-20682781)
chr5 (344-431)||(24463891-24463978)
chr5 (294-439)||(11845798-11845944)
chr5 (338-439)||(14588614-14588716)
chr5 (274-399)||(18136317-18136443)
chr5 (274-403)||(20525782-20525912)
chr5 (274-395)||(28857072-28857194)
chr5 (274-390)||(35403558-35403675)
chr5 (353-437)||(9805028-9805112)
chr5 (269-404)||(35561850-35561986)
chr5 (353-437)||(41801001-41801085)
chr5 (274-437)||(2485141-2485304)
chr5 (336-436)||(21487623-21487721)
chr5 (353-416)||(30995145-30995208)
chr5 (274-328)||(1826801-1826855)
chr5 (274-403)||(30349523-30349653)
chr5 (353-431)||(39099784-39099862)
chr5 (353-403)||(42291538-42291588)
chr5 (274-427)||(18294493-18294646)
chr5 (274-323)||(23383592-23383641)
chr5 (350-399)||(24875366-24875415)
chr5 (343-404)||(25452939-25453000)
chr5 (303-403)||(35638066-35638167)
chr5 (274-322)||(6767166-6767214)
chr5 (353-437)||(13664284-13664368)
[»] scaffold0006 (1 HSPs)
scaffold0006 (274-431)||(68463-68618)
[»] scaffold0029 (1 HSPs)
scaffold0029 (274-430)||(40990-41147)
[»] scaffold0004 (1 HSPs)
scaffold0004 (280-404)||(95013-95136)
[»] scaffold0011 (2 HSPs)
scaffold0011 (277-436)||(186467-186626)
scaffold0011 (382-437)||(224372-224427)
[»] scaffold0209 (1 HSPs)
scaffold0209 (274-404)||(12521-12650)
[»] scaffold0086 (1 HSPs)
scaffold0086 (274-403)||(26129-26259)
[»] scaffold0170 (1 HSPs)
scaffold0170 (339-403)||(9856-9921)
[»] scaffold0316 (1 HSPs)
scaffold0316 (338-437)||(1613-1713)
[»] scaffold0291 (1 HSPs)
scaffold0291 (353-437)||(6881-6965)
[»] scaffold0010 (2 HSPs)
scaffold0010 (353-437)||(155710-155794)
scaffold0010 (274-377)||(25843-25947)
[»] scaffold0005 (1 HSPs)
scaffold0005 (360-439)||(250022-250101)
[»] scaffold0384 (1 HSPs)
scaffold0384 (274-403)||(5919-6048)
[»] scaffold0002 (1 HSPs)
scaffold0002 (289-437)||(319383-319532)
[»] scaffold0009 (1 HSPs)
scaffold0009 (350-437)||(42831-42918)
[»] scaffold0016 (1 HSPs)
scaffold0016 (274-323)||(8824-8873)
[»] scaffold0376 (1 HSPs)
scaffold0376 (353-437)||(12696-12780)


Alignment Details
Target: chr8 (Bit Score: 183; Significance: 1e-98; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 233 - 559
Target Start/End: Complemental strand, 34723827 - 34723512
Alignment:
Q  233 agttaatcgttcttatctgtaattaaaatgcacataatatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaat 332  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  34723827 agttaatcgttattatctgtaattaaaatgcacataatatgaaccaagttgtttgagctccggtggcaatgagctccttccaaagacatattcgggaaat 34723728  T
Q  333 gctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgt 432  Q
     || ||||||||| |||||  ||||| |||||||  |||||||||| |||||||| |||| |||||| |||        |||||||||||||||||||||    
T  34723727 actaagttcgattcccagggaaacaatgtttggc--ttgcgcatgcctttacgcaagagctggattaatcg--------tggtgtgtcgaaaaccggtgt 34723638  T
Q  433 gaaagaagnnnnnnnntgcacataatatgttgtgtgctgtggggagaagggagacagagagaagaagaaacctgcttcattttgtctttcctgcgtccac 532  Q
    ||||| |         |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34723637 gaaagca-aaaaaaaatgcacataatatgttgtgtgctgtggggagaatggagacagagagaagaagaaacctgcttcattttgtctttcctgcgtccac 34723539  T
Q  533 ctgtccactgtctctctggcctatgct 559  Q
    |||||||||||||||||||||| ||||    
T  34723538 ctgtccactgtctctctggcctctgct 34723512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 34724308 - 34724239
Alignment:
Q  174 gataactattttaaatttttgcgtgataacattcaaattagtacataaaatgatatgatagttaatcgtt 243  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34724308 gataactatttcaaatttttgcgtggtaacattcaaattagtacataaaatgatatgatagttaatcgtt 34724239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 274 - 436
Target Start/End: Complemental strand, 15884718 - 15884556
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||||||| |||||||||| || || |||||||||| ||||||   ||| ||| | | |||||||| ||||| |||||||  ||||| | ||||    
T  15884718 aaccaagttgattgggctccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgattcccaggggaacaacacttggcaagtgcg 15884619  T
Q  374 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    ||||| | |||||||||||||||||||||||  | |||||||| |||| ||||||||| ||||    
T  15884618 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 15884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 43027252 - 43027416
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||||||| ||| |||||||||||||||| ||| || |||  ||||||| ||| ||| ||| |||||||| |||||| |||||||| ||| ||| |||    
T  43027252 aaccaagttgtttgggctccagtggcaatgagctcatttcaagaacgtatttggggaatactgggttcgattcccaggaggaacaacgattgtccaatgc 43027351  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| |||||||||||||||   ||||||| || |||| |||||| || |||||    
T  43027352 gcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaaag 43027416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 8141049 - 8141179
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || || ||||||| |||||||||||| ||| | | |||||||||||||| | ||||||| ||||||| |||    
T  8141049 aaccaagttgtttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgc 8141148  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | |||||| |||| | ||||||||    
T  8141149 gcatgcctctacgcatgagctgaattagtcg 8141179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 437
Target Start/End: Complemental strand, 14666240 - 14666070
Alignment:
Q  268 aatatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggc 366  Q
    ||||| |||||||||| ||| ||||||||||||| || ||| |||||| ||||||| |||| ||| | | |||||||| ||||| | ||||||  |||||    
T  14666240 aatattaaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggc 14666141  T
Q  367 cattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    || ||||||||| | ||||||| |||| ||||||||||  |   |||||| |||||||||||||| |||||    
T  14666140 cagtgcgcatgcctctacgcacaagccagattagtcgcccacagttggtgggtcgaaaaccggtgcgaaag 14666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 2467281 - 2467117
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||||||| || |||||||  ||||||| |||    
T  2467281 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgc 2467182  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||  | || ||| |||||||||||||||   |   ||||||||||| ||||||||| |||||    
T  2467181 gcatgtctctatgcatgagccggattagtcgtccacaattggtgtgtcggaaaccggtgcgaaag 2467117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 6100419 - 6100583
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||| ||||||||| || |||||| ||| ||||||| |||| ||| | | |||||||| ||||||| ||||||| ||||||| |||    
T  6100419 aaccaagttgtttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 6100518  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||   |||||| |||||||||||||||   | |||| ||| ||||||||||| || |||||    
T  6100519 gcatgccactacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccgctgcgaaag 6100583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 8997707 - 8997543
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| |||  |||||||||||| ||||||||| ||| ||| |||||||| ||| | | |||||||| | | || ||||||||||| |||| | |    
T  8997707 aaccaagttgcttggactccagtggcaaggaactcctttcaaggacatattcggggaataccgtgttcgattcctaaggggaacaacgtttcgccagttc 8997608  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| ||||| |||||||||   |||||||||| |||| ||||||||| |||||    
T  8997607 gcatgcctatacgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaag 8997543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 393
Target Start/End: Complemental strand, 38922577 - 38922457
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| |||| | |||||||| ||||||| |||    
T  38922577 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttggccagtgc 38922478  T
Q  373 gcatgcatttacgcacgagcc 393  Q
    |||||| ||||||||||||||    
T  38922477 gcatgcctttacgcacgagcc 38922457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 278 - 431
Target Start/End: Original strand, 18373961 - 18374115
Alignment:
Q  278 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgcat 376  Q
    |||||| ||| |||||| |||||| || ||| |||||||||  ||| |||||||| |   ||||||||  |||| ||||||||| ||| ||| |||||||    
T  18373961 aagttgtttgggctccaatggcaaggagctcattccaaagatatatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcat 18374060  T
Q  377 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    || | |||||| |||||||||||||||   | |||||||| ||||||||||||||    
T  18374061 gcctctacgcatgagccggattagtcgtccaactttggtgggtcgaaaaccggtg 18374115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 269 - 437
Target Start/End: Original strand, 45521111 - 45521279
Alignment:
Q  269 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggcca 368  Q
    |||| |||||||||| ||| ||||||||||||| ||  || |||||| || |||  |||| ||| | | |||||||| ||||| |||||||  |||  ||    
T  45521111 atatcaaccaagttgcttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcgattcccaggggaacaacacttgatca 45521210  T
Q  369 ttgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
     ||||||||| | |||||| ||||||||||||||||  | ||||| || |||| ||||||||| |||||    
T  45521211 gtgcgcatgcctctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaag 45521279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 437
Target Start/End: Original strand, 43032853 - 43033012
Alignment:
Q  279 agttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatg 377  Q
    ||||| ||| ||||||||||||| ||  |||||||||| | ||||  |||||||   |  ||||||| ||||| | ||||||| ||||||| ||||||||    
T  43032853 agttgtttgggctccagtggcaaggagttccttccaaaaatgtatctgggaaatatcggattcgattcccagggggaacaacgcttggccagtgcgcatg 43032952  T
Q  378 catttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    | | ||| |||||||||||||||||||  | |||||||| |||  ||||||||| |||||    
T  43032953 cctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 43033012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 44893441 - 44893310
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||| ||||| | || |||||| | ||||||| ||     
T  44893441 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgt 44893342  T
Q  373 gcatgcatttacgcacgagccggattagtcgc 404  Q
    |||||| | |||||||||||||||||| ||||    
T  44893341 gcatgcctctacgcacgagccggattaatcgc 44893310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 583761 - 583890
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| |||| |||||||| || || ||||||| |||||| ||| ||||| | | |||||||| | ||| |||||||| ||| ||| ||||    
T  583761 aaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattcctagg-gaacaacgcttgaccagtgcg 583859  T
Q  374 catgcatttacgcacgagccggattagtcgc 404  Q
    ||||| | |||||| ||| ||||||||||||    
T  583860 catgcctctacgcatgagtcggattagtcgc 583890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 10927553 - 10927683
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||| ||||||||| || || ||| ||| ||||||  |||| ||| | | |||||||| | ||||| ||||||| ||||||| |||    
T  10927553 aaccaagttgcttgggcttcagtggcaaggagcttctttcaaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgc 10927652  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | |||||| |||||||||||||||    
T  10927653 gcatgcctctacgcatgagccggattagtcg 10927683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 24837189 - 24837319
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || ||||||||||  |||||  |||| ||| | | |||||||| ||| ||||||||||| ||||||| ||     
T  24837189 aaccaagttgcttgggctccagtggcaaggagctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgt 24837288  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
     ||||| | || |||||||| ||||||||||    
T  24837289 tcatgcctctaagcacgagcaggattagtcg 24837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 437
Target Start/End: Original strand, 17981392 - 17981552
Alignment:
Q  278 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcat 376  Q
    |||||| ||| ||||||||||||| || |||||||||| || |||  |||||||| | | |||||||| ||| || |||||||  ||| ||| || ||||    
T  17981392 aagttgcttgggctccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcat 17981491  T
Q  377 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    || | |||||||||| || |||||| ||  | |||||||| |||| ||||||||| |||||    
T  17981492 gcctctacgcacgagtcgaattagttgcccagctttggtgagtcggaaaccggtgcgaaag 17981552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 436
Target Start/End: Complemental strand, 7673816 - 7673657
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||  ||| |||    |||||||||    || |||||||||||||| | || |    
T  7673816 aaccaagttgcttg-gctccagtggcaaggagctccttccaaggacgtatctggggaatatcaagttcgattag--ggggaacaacgtttggctagtgtg 7673720  T
Q  374 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    ||||| | |||||||||||||||||  ||||  |||||| |||  ||||||||||||| ||||    
T  7673719 catgcctctacgcacgagccggatttttcgcccatctttagtggatcgaaaaccggtgcgaaa 7673657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 34724452 - 34724413
Alignment:
Q  28 catctaaaaatttgtaggcggttttatatttaaggacaaa 67  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  34724452 catctaaaaatttgtagacggttttatatttaaggacaaa 34724413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 359
Target Start/End: Original strand, 17845680 - 17845764
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaac 359  Q
    |||||||||| ||| |||||||||||||||| |||||||||| || ||| ||||| ||| ||| ||| |||| ||||| |||||||    
T  17845680 aaccaagttgtttgggctccagtggcaatgagctccttccaaggatgtactcggggaatactg-gtttgattcccaggggaacaac 17845764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 378
Target Start/End: Complemental strand, 34613941 - 34613836
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||| ||| ||| |||||||||||||||| |||||||||||  ||||| |||| |||   | |||||||| |||||| ||||||||| |||||| | |    
T  34613941 aaccaaattgtttgggctccagtggcaatgagctccttccaaaaccgtatccggggaatatcgggttcgattcccaggaggaacaacgtctggccagtac 34613842  T
Q  373 gcatgc 378  Q
    ||||||    
T  34613841 gcatgc 34613836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 2964103 - 2964187
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||| ||||||| || |||||| | ||||||||| |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  2964103 gaacaacgcttggccaatgtgcatgcctctacgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 2964187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 16893884 - 16894046
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| |||  |||||||| ||||||||||||| ||||||| |||| |||   | ||||||||  || || ||| |||| ||||||| | |    
T  16893884 aaccaagttgcttgggctatagtggcaaggaactccttccaatgacgtatccggggaatatcgggttcgattcacagggggaataacgcttggccagtac 16893983  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
     ||||| |||||||| |||||||||| |||||  | |||||||| |||| ||||||||| |||||    
T  16893984 acatgcctttacgcatgagccggatt-gtcgcccacctttggtg-gtcggaaaccggtgcgaaag 16894046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 404
Target Start/End: Complemental strand, 44031599 - 44031467
Alignment:
Q  278 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggcc-----attg 371  Q
    |||||| |||||||| |||||||| ||||||||||||| || |||  ||||||||   | |||||||||||| || |||||||| ||||||     | ||    
T  44031599 aagttgtttgagctctagtggcaaggaactccttccaaggatgtaaccgggaaatatcgggttcgatttccagggggaacaacgcttggccagtgtagtg 44031500  T
Q  372 cgcatgcatttacgcacgagccggattagtcgc 404  Q
     |||||| | | |||||||||||||||||||||    
T  44031499 tgcatgcctctgcgcacgagccggattagtcgc 44031467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 13085471 - 13085602
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 372  Q
    |||||| ||| ||| ||||||||||| | || |||||||||| ||||||| |||| ||| | | ||||||||  ||| | ||||||||||| |||| ||     
T  13085471 aaccaacttgtttgggctccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgt 13085570  T
Q  373 gcatgcatttacgcacgagccggattagtcgc 404  Q
    |||| | | |||||||||||| ||||| ||||    
T  13085571 gcatacctctacgcacgagccagattaatcgc 13085602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 404
Target Start/End: Complemental strand, 33401958 - 33401831
Alignment:
Q  278 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcat 376  Q
    |||||| ||| ||||||||||||| || |||||| ||| |||||| ||||| ||| | | ||||||||| || || |||||||  ||| ||| || ||||    
T  33401958 aagttgtttgggctccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcat 33401859  T
Q  377 gcatttacgcacgagccggattagtcgc 404  Q
    || | |||||| ||| ||||||||||||    
T  33401858 gcctctacgcatgagtcggattagtcgc 33401831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 1013140 - 1013014
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || ||  |||||| ||||||| |||| ||| | | |||||||| ||| || |||||||| ||||||| | |    
T  1013140 aaccaagttgcttgggctccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagtac 1013041  T
Q  373 gcatgcatttacgcacgagccggatta 399  Q
     ||||| | |||||| |||||| ||||    
T  1013040 acatgcctctacgcatgagccgaatta 1013014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 403
Target Start/End: Complemental strand, 13358039 - 13357989
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 403  Q
    |||||||||||||||| || |||||| | || |||||||||||||||||||    
T  13358039 gaacaacgtttggccaatgtgcatgcctctatgcacgagccggattagtcg 13357989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 22212579 - 22212514
Alignment:
Q  372 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||| | |||||||| ||||||||||||||  | ||||||||  ||||||||||||| |||||    
T  22212579 cgcatgcttctacgcacgggccggattagtcgctcacctttggtggttcgaaaaccggtgcgaaag 22212514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 16291250 - 16291202
Alignment:
Q  389 gagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||| |||||||||||  | |||||||| ||||||||||||||||||||    
T  16291250 gagctggattagtcgctcacctttggtgggtcgaaaaccggtgtgaaag 16291202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 26570951 - 26571035
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||| ||||||| || | |||||| |||||| |||||||||||||||   | ||||| || |||| |||||| ||||||||    
T  26570951 gaacaacgcttggccagtgtgtatgcatctacgcatgagccggattagtcgtccacctttgatgagtcggaaaccgatgtgaaag 26571035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 274 - 402
Target Start/End: Original strand, 24166398 - 24166527
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 372  Q
    |||||||||||||| ||||||||||||| || |||||||||| |||||| ||||| ||| ||| |||||||| || |||  ||||||||||||||| |||    
T  24166398 aaccaagttgattgggctccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgattcccaagggaaacaacgtttggccagtgc 24166497  T
Q  373 gcatgcatttacgcacgagccggattagtc 402  Q
    |||||| | |||||||||||| ||||||||    
T  24166498 gcatgcctctacgcacgagccagattagtc 24166527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 38165975 - 38166139
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||| |||| ||| ||| ||| |||| ||||| | ||||||| ||||||| |||    
T  38165975 aaccaagttgtttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgc 38166074  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||  | |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  38166075 gcatggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 38166139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 1446774 - 1446904
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  1446774 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 1446873  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | |||||| |||||||||||||||    
T  1446874 gcatgcctctacgcatgagccggattagtcg 1446904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 274 - 439
Target Start/End: Original strand, 2559255 - 2559421
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||   ||| ||| | |  ||||||||| |||| |||||||| ||||||| |||    
T  2559255 aaccaagttgtttgggctccagtggcaacgagctccttccaaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgc 2559354  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    |||||| | ||||||| |||||||||| |||   | |||||||| |||| ||||||||| |||||||    
T  2559355 gcatgcctctacgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgcgaaagaa 2559421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 29895735 - 29895865
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  29895735 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 29895834  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | |||||| |||||||||||||||    
T  29895835 gcatgcctctacgcatgagccggattagtcg 29895865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 53599008 - 53599134
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||||||| ||||||||||||||| |||    
T  53599008 aaccaagttgtttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgc 53599107  T
Q  373 gcatgcatttacgcacgagccggatta 399  Q
    |||||| | |||||| |||||||||||    
T  53599108 gcatgcctctacgcatgagccggatta 53599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 431
Target Start/End: Complemental strand, 1940937 - 1940782
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| |||| |||||||| || |||||||||| ||||||  ||||||||   | |||||||| ||||| | ||||||| ||||    |||    
T  1940937 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttggg---tgc 1940841  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    |||||| | |||||||||||||||||||||||  | |||||||| ||||||||||||||    
T  1940840 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtg 1940782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 47078406 - 47078570
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| | ||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||||| | ||||||| ||||||| |||    
T  47078406 aaccaagttgcttgggttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgc 47078505  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
     ||||| | |||||||||||||||||||||||  | | |||||| |||| ||||| ||| |||||    
T  47078506 acatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccagtgcgaaag 47078570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 15840082 - 15839967
Alignment:
Q  289 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 388  Q
    ||||||||||||| || |||||||||| |||||| | ||| ||| | | |||||||| | || |||| |||||||||||| ||||||||| | ||||||     
T  15840082 gctccagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcctagaagaataacgtttggccagtgcgcatgcctctacgcat 15839983  T
Q  389 gagccggattagtcgc 404  Q
    ||||||||||||||||    
T  15839982 gagccggattagtcgc 15839967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 274 - 439
Target Start/End: Original strand, 27248376 - 27248540
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||| | |||||| |||||||| |||||||  ||    
T  27248376 aaccaagttgcttgggctccagtggcaacgagctccttccaaggacgtatccggggaataccgggttcgagtcccaggaggaacaacgcttggcca--gc 27248473  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    |||||| | |||||| ||||| ||||||||||  | |||||||  |||  |||| ||||||||||||    
T  27248474 gcatgcctctacgcaggagccagattagtcgcccacctttggtaggtcagaaactggtgtgaaagaa 27248540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 48317438 - 48317307
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || ||| |||||| ||||||||||  |||| |||  |||||||| ||||| |||||||| |||| || ||     
T  48317438 aaccaagttgcttgggctccagtggcaaagagctcattccaatgacgtattcgaaaaatactggattcgattttcaggaggaacaacgcttggtcagtgt 48317339  T
Q  373 gcatgcatttacgcacgagccggattagtcgc 404  Q
    | |||| | |||||||||||||||||||||||    
T  48317338 gtatgcctctacgcacgagccggattagtcgc 48317307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 43458561 - 43458691
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||||||| ||| |||||||||||||  | ||| |||||| |||||||| ||| ||| |||  ||||||| |||||| ||| |||| ||||||| |||    
T  43458561 aaccaagttgcttgggctccagtggcaagaagctcattccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgc 43458660  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | |||| |||||||||||||||||    
T  43458661 gcatgcctctacggacgagccggattagtcg 43458691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 277 - 401
Target Start/End: Original strand, 29588687 - 29588812
Alignment:
Q  277 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgca 375  Q
    ||||||||||| ||||||||||||| || ||| ||||||||||||   |||||||| | | |||||||| ||||| | ||||| | ||||| | ||||||    
T  29588687 caagttgattgggctccagtggcaaggagctcattccaaagacgtgcccgggaaataccgggttcgattcccaggggaaacaaagcttggctagtgcgca 29588786  T
Q  376 tgcatttacgcacgagccggattagt 401  Q
    ||| | ||||||||||||||||||||    
T  29588787 tgcctctacgcacgagccggattagt 29588812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 437
Target Start/End: Complemental strand, 5473007 - 5472847
Alignment:
Q  278 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcat 376  Q
    |||||| ||| ||||||||||||| || ||| || ||| ||||||| |||| ||| |   ||| ||||  |||| ||| ||||| ||||||| |||||||    
T  5473007 aagttgtttgggctccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcat 5472908  T
Q  377 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    || | |||||||||||||||||||||||  | |||||||| ||||||||| |||| |||||    
T  5472907 gcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaactggtgcgaaag 5472847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 42722708 - 42722576
Alignment:
Q  306 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 404  Q
    |||||||||| ||||||  |||||||| | | |||| ||| ||||||| ||||||| ||||||| ||||||||| | |||||| |||||||||||||||     
T  42722708 ctccttccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgt 42722609  T
Q  405 atatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
      | |||| ||| |||||||||||||| |||||    
T  42722608 tcacctttagtgggtcgaaaaccggtgcgaaag 42722576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 403
Target Start/End: Complemental strand, 49260806 - 49260698
Alignment:
Q  296 tggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgcacgagccg 394  Q
    |||||| ||||||||||||| || |||| |||| ||| |||| ||| ||| ||| || |||||||| ||||||| ||||||||| | |||||||||||||    
T  49260806 tggcaaggaactccttccaaggatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccg 49260707  T
Q  395 gattagtcg 403  Q
    |||||||||    
T  49260706 gattagtcg 49260698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 3574609 - 3574478
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||    || ||| | |||||| ||| ||| ||||||||||  ||||||| |||    
T  3574609 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctagggaataccgagttcaattcccagggagaacaacacttggccagtgc 3574510  T
Q  373 gcatgcatttacgcacgagccggattagtcgc 404  Q
    |||||| | |||||||||| ||||||||||||    
T  3574509 gcatgcctctacgcacgagtcggattagtcgc 3574478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 307 - 437
Target Start/End: Complemental strand, 7246776 - 7246645
Alignment:
Q  307 tccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgca 405  Q
    ||||||||| ||||||  |||| ||| ||| |||||||| | || | |||||||| ||||||| ||||||||| | |||||| ||||||||||||||||     
T  7246776 tccttccaaggacgtacccggggaatactgggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcc 7246677  T
Q  406 tatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
     | |||||||| |||| ||||||||| |||||    
T  7246676 cacctttggtgggtcggaaaccggtgcgaaag 7246645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 274 - 436
Target Start/End: Original strand, 13073486 - 13073649
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| |||| ||||||||||| |||||||||| ||||||   ||  ||| | |||||||||| ||| || |||||| ||||||||| |||    
T  13073486 aaccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacctggagaataccgagttcgattcccatggggaacaatgtttggccagtgc 13073585  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    |||| | | |||||| || || |||||||||  || |||||||| |||| ||||||||| ||||    
T  13073586 gcatacctctacgcatgaaccagattagtcgtttacctttggtgggtcggaaaccggtgcgaaa 13073649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 21192622 - 21192752
Alignment:
Q  306 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgca 405  Q
    |||||||||| |||||||| ||||||| | | |||||| ||||  | |||||||||| ||||| ||||||||| | |||||||||| ||||||| ||||     
T  21192622 ctccttccaatgacgtatttgggaaataccgggttcgagttccgag-gaacaacgttgggccagtgcgcatgcctctacgcacgagtcggattaatcgcc 21192720  T
Q  406 tatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
     |  ||||||| |||||||||||||| |||||    
T  21192721 cacatttggtgagtcgaaaaccggtgcgaaag 21192752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 41163045 - 41162914
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||| ||| || |||||||||| ||||||| |||||||| | ||||||||||||||| | |||||||  ||||||| ||     
T  41163045 aaccaagttgcttgggctccagtgacaaggagctccttccaaggacgtatccgggaaataccgagttcgatttccagagggaacaacacttggccagtgt 41162946  T
Q  373 gcatgcatttacgcacgagccggattagtcgc 404  Q
     ||||| | || ||| |||||| |||||||||    
T  41162945 acatgcttctatgcatgagccgaattagtcgc 41162914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 287 - 437
Target Start/End: Complemental strand, 47682531 - 47682381
Alignment:
Q  287 gagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgc 386  Q
    ||||||||| | ||| |||||||||| |||||||||| |||  |||  ||| || ||||  |||| ||| |||||||||||| ||| ||||  | |||||    
T  47682531 gagctccagggacaaggaactccttctaaagacgtatccggagaatattgaatttgattctcaggggaataacgtttggccagtgcacatgtctctacgc 47682432  T
Q  387 acgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||||| ||||||||  | |||||||| |||| ||||||||| |||||    
T  47682431 acgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaag 47682381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 275 - 404
Target Start/End: Complemental strand, 49952308 - 49952178
Alignment:
Q  275 accaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcg 373  Q
    ||||||||| | ||| |||| |||||| || |||||||||| ||||||||||||||||  |  ||| ||||| ||| || |||||||||||| || ||||    
T  49952308 accaagttgttggagttccattggcaaggagctccttccaaggacgtattcgggaaatattaggtttgattttcagaagaaacaacgtttggtcagtgcg 49952209  T
Q  374 catgcatttacgcacgagccggattagtcgc 404  Q
    || || | |||||| ||||||||||||||||    
T  49952208 cacgcctctacgcatgagccggattagtcgc 49952178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 55005448 - 55005338
Alignment:
Q  295 gtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagcc 393  Q
    |||||||||| ||||||||||||||||||  ||||||| | || |||||||  |||| ||| ||||| ||| ||||||||||||| | ||||||| || |    
T  55005448 gtggcaatgagctccttccaaagacgtatctgggaaataccgaattcgattcgcaggggaaacaacgcttgaccattgcgcatgcctctacgcacaagtc 55005349  T
Q  394 ggattagtcgc 404  Q
    |||||||||||    
T  55005348 ggattagtcgc 55005338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 17080071 - 17080155
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||| ||||||| ||||||||| | |||||| ||||||||||||||||| | ||||| ||  ||||||||||||| |||||    
T  17080071 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgcgaaag 17080155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 55920982 - 55921146
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||| |  |||| ||| | | |||||||| ||| || |||||||  |||| || |||    
T  55920982 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgc 55921081  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||| | ||||||||||| ||||  | |||||||| |||| ||||||||| |||||    
T  55921082 gcatgcctctacgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgcgaaag 55921146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 436
Target Start/End: Original strand, 33647669 - 33647832
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| |||| |||||||| || |||||| ||| |||||||  ||| ||| | | |||||||||||| ||||||||||| ||| ||| |||    
T  33647669 aaccaagttgcttgggctctagtggcaaggagctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtgc 33647768  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
     ||| | | ||||||||| || |||||||||   ||||||||||  ||| ||||||||| ||||    
T  33647769 acattcctctacgcacgaaccagattagtcgttcatctttggtggatcggaaaccggtgcgaaa 33647832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 36262917 - 36262799
Alignment:
Q  285 ttgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttac 384  Q
    |||||||||||||||||  | |||||||||| ||||||  |||  ||| | | |||||||| ||||| |||||||| ||||||| ||| ||||| | |||    
T  36262917 ttgagctccagtggcaagaagctccttccaaggacgtacccggagaataccgggttcgattcccagg-gaacaacgcttggccagtgcacatgcctctac 36262819  T
Q  385 gcacgagccggattagtcgc 404  Q
    ||||||| ||||||||||||    
T  36262818 gcacgagtcggattagtcgc 36262799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 295680 - 295566
Alignment:
Q  289 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 388  Q
    ||||||||||||| |||| ||||| || ||||||| |||| ||| |    ||||||| ||||  |||||||||||||||| ||||||||| | |||||||    
T  295680 gctccagtggcaaggaacaccttctaaggacgtatccggggaataccagattcgattcccagaggaacaacgtttggccagtgcgcatgcctctacgcac 295581  T
Q  389 gagccggattagtcg 403  Q
    || || |||||||||    
T  295580 gaaccagattagtcg 295566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 290 - 403
Target Start/End: Original strand, 20354601 - 20354715
Alignment:
Q  290 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcac 388  Q
    |||||||||||| || |||||||||| |||| | |||  |||| | ||||| |||||||||| ||||||||| ||||| | ||||||||| | ||||||     
T  20354601 ctccagtggcaaggatctccttccaaggacgaactcgaaaaataccgagtttgatttccagggagaacaacgcttggctagtgcgcatgcctctacgcat 20354700  T
Q  389 gagccggattagtcg 403  Q
    ||| |||||||||||    
T  20354701 gagtcggattagtcg 20354715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 20532510 - 20532441
Alignment:
Q  336 gagttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 404  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||| | |||||| ||||||||| ||||||    
T  20532510 gagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggataagtcgc 20532441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 436
Target Start/End: Complemental strand, 40781009 - 40780861
Alignment:
Q  289 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgcgcatgcatttacgca 387  Q
    ||||||||||||| || || |||  || ||||||||||| ||||   | |||||||| || ||| |||||||| |||| || ||||||||| | ||||||    
T  40781009 gctccagtggcaaggagcttcttttaaggacgtattcggaaaatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctacgca 40780910  T
Q  388 cgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
     |||||||||||||||   | |||||||| |||| ||||||||| ||||    
T  40780909 tgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 309 - 431
Target Start/End: Complemental strand, 3159597 - 3159474
Alignment:
Q  309 cttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcata 407  Q
    ||||||| ||||||| |||  ||| | | |||||| ||||||| | ||||||| ||||||| ||||||||| | |||||||||||| ||||||||||  |    
T  3159597 cttccaaggacgtatccggagaataccgggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctca 3159498  T
Q  408 tctttggtgtgtcgaaaaccggtg 431  Q
     | |||||| |||| |||||||||    
T  3159497 ccattggtgggtcggaaaccggtg 3159474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 12703708 - 12703577
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| ||  |||||| || |||||| ||| | ||| ||||||||||||||||| | |||||||| ||| ||| ||     
T  12703708 aaccaagttgcttgggctccagtggcaaggagatccttcaaaggacgtactcgaggaatactgagttcgatttccagtgggaacaacgcttgaccagtgt 12703609  T
Q  373 gcatgcatttacgcacgagccggattagtcgc 404  Q
    | |||  | ||||||  |||||||||||||||    
T  12703608 gtatgtctctacgcataagccggattagtcgc 12703577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 439
Target Start/End: Original strand, 14567274 - 14567353
Alignment:
Q  360 gtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||    |||||||| |||| ||| ||||| |||||||    
T  14567274 gtttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaagaa 14567353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 403
Target Start/End: Original strand, 20128273 - 20128387
Alignment:
Q  290 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcac 388  Q
    |||||| ||||| ||  ||||||||| ||||||| |||| ||| ||| ||||||||  |||| | ||||| | ||||||| ||||||||| |||||||||    
T  20128273 ctccagcggcaaggagttccttccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcac 20128372  T
Q  389 gagccggattagtcg 403  Q
    ||||  |||||||||    
T  20128373 gagctagattagtcg 20128387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 38075381 - 38075507
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||| ||||| ||  ||||||||| |||||||||||  ||| | | ||||||||  |||| | ||||||| ||||||| |||    
T  38075381 aaccaagttgtttgggctccagcggcaaggagttccttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgc 38075480  T
Q  373 gcatgcatttacgcacgagccggatta 399  Q
    |||||| | |||||| |||||| ||||    
T  38075481 gcatgcctctacgcatgagccgaatta 38075507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 19651608 - 19651559
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 323  Q
    |||||||||| ||| |||||||||||||||| |||||||||| |||||||    
T  19651608 aaccaagttgtttgggctccagtggcaatgagctccttccaaggacgtat 19651559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 279 - 399
Target Start/End: Original strand, 20421727 - 20421847
Alignment:
Q  279 agttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatg 377  Q
    ||||| ||| ||| ||||||||| || |||||| |||||||||||  ||| ||| ||| |||||||||||| || |||||||  ||||||| ||||||||    
T  20421727 agttgcttgggcttcagtggcaaggagctcctttcaaagacgtatctggggaatactg-gttcgatttccagggggaacaacacttggccagtgcgcatg 20421825  T
Q  378 catttacgcacgagccggatta 399  Q
    | | |||||| ||||| |||||    
T  20421826 cctctacgcatgagccagatta 20421847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 425
Target Start/End: Original strand, 8424582 - 8424654
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaa 425  Q
    |||||||||||||||| ||||||||| | || |||||||||  |||| ||||  |||||||||| ||||||||    
T  8424582 gaacaacgtttggccagtgcgcatgcctctatgcacgagccaaattaatcgctcatctttggtgggtcgaaaa 8424654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 8888970 - 8889134
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| |||| || ||||| || ||||||| || ||||||| |||| ||| | | |||||||| | ||| | ||||||  |||| || |||    
T  8888970 aaccaagttgtttgggctctagcggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgc 8889069  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||  | |||||| |||||||||||||||   | |||||||| |||| |||||||||| ||||    
T  8889070 gcatggctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgtaaaag 8889134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 14124044 - 14124128
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||| |||||||| ||||||||| | ||| |||||||||||||||||||  | | |||||| || | ||||||||| |||||    
T  14124044 gaacaacatttggccagtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaag 14124128  T

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Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 30317261 - 30317345
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||| ||||||| | || |||| | ||||||||||||| |||||||||  | |||||||| |||| |||||| ||||||||    
T  30317261 gaacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacctttggtgggtcggaaaccgatgtgaaag 30317345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 401
Target Start/End: Complemental strand, 48015203 - 48015108
Alignment:
Q  307 tccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagt 401  Q
    ||||||||||||||||  || | ||| | | |||||||| |||| | |||||||| ||||||| |||||| || | ||||||||||||||||||||    
T  48015203 tccttccaaagacgtacccgaggaataccgggttcgattcccagtgggaacaacgcttggccagtgcgcaagcctctacgcacgagccggattagt 48015108  T

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Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 439
Target Start/End: Original strand, 54946296 - 54946363
Alignment:
Q  372 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    ||||||| | |||||| ||||||||||||||||  ||| |||||| |||| ||||||| |||||||||    
T  54946296 cgcatgcctctacgcatgagccggattagtcgcccatcattggtgggtcggaaaccggcgtgaaagaa 54946363  T

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Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 50485968 - 50486022
Alignment:
Q  350 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 404  Q
    ||||||||||| |||||||   ||||||| | |||||||||||||||||||||||    
T  50485968 ggagaacaacgattggccagaacgcatgcctctacgcacgagccggattagtcgc 50486022  T

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Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 4736545 - 4736582
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactcctt 311  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  4736545 aaccaagttgtttgagctccagtggcaatgagctcctt 4736582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 4738630 - 4738730
Alignment:
Q  338 gttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    ||||||||||||||| |||||||| || |||| ||||||||  | |||||| |||| | ||||||||   | |||||||| |||| ||||||||| ||||    
T  4738630 gttcgatttccaggaggaacaacgctttgccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4738729  T
Q  437 g 437  Q
    |    
T  4738730 g 4738730  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 38841528 - 38841472
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaa 330  Q
    |||||||||  ||||||| |||||||||||| || ||||||| |||||| |||||||    
T  38841528 aaccaagttacttgagcttcagtggcaatgagcttcttccaaggacgtactcgggaa 38841472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 6e-26; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 14107521 - 14107357
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || ||||||||||||||||||||||| ||| | | |||||||| |||||| |||||||| ||| ||| |||    
T  14107521 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgc 14107422  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
     ||||| | |||||| ||||||||||||||||  ||  || ||| |||| ||||||||| |||||    
T  14107421 acatgcctctacgcatgagccggattagtcgcccattattagtgggtcggaaaccggtgcgaaag 14107357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 21898595 - 21898759
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| |||||| |||||||| ||||||| |||    
T  21898595 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 21898694  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| |||||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  21898695 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 21898759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 274 - 403
Target Start/End: Complemental strand, 2271464 - 2271336
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||||||| ||| | | ||||||||  || |||||||||| || |||| ||||    
T  2271464 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattctca-gagaacaacgcttagccagtgcg 2271366  T
Q  374 catgcatttacgcacgagccggattagtcg 403  Q
    ||||  | ||||||||||||||||||||||    
T  2271365 catgtctctacgcacgagccggattagtcg 2271336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 274 - 403
Target Start/End: Complemental strand, 29333301 - 29333172
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| |||| ||||||||||| |||||||||| ||||||  | || ||| | | |||||||||||||| |||||||||||||||| ||||    
T  29333301 aaccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacccagggaataccgggttcgatttccaggggaacaacgtttggccagtgcg 29333202  T
Q  374 catgcatttacgcacgagccggattagtcg 403  Q
    ||||| | |||||| |||||| || |||||    
T  29333201 catgcctctacgcatgagccgaatcagtcg 29333172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 5253386 - 5253222
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||||| | ||||||  ||||||| |||    
T  5253386 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 5253287  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| ||||||||||| ||||  | |||||||| |||| ||||||||| |||||    
T  5253286 gcatgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaaag 5253222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 439
Target Start/End: Original strand, 8938658 - 8938824
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||| ||| || |||||||||||||| ||| |||| ||| ||  |||||||| |||||| |||||||  ||| ||| |||    
T  8938658 aaccaagttgtttgggctccagtgacaaggagctccttccaaagacatatccggggaatacttggttcgattcccaggaggaacaacacttgaccagtgc 8938757  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    ||| |||| |||||| |||||| ||||||||   | ||||| || |||| ||||||||| |||||||    
T  8938758 gcaagcatctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaagaa 8938824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 437
Target Start/End: Original strand, 12606399 - 12606541
Alignment:
Q  296 tggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccg 394  Q
    ||||||||| ||||||||||  |||||| |||| ||| |    ||||||||||||| | ||||||||||||||| ||||||||| | |||||||||||||    
T  12606399 tggcaatgagctccttccaagaacgtatccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccg 12606498  T
Q  395 gattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||||||  | |||||||| |  | ||||||||| |||||    
T  12606499 gattagtcgcccacctttggtgagctggaaaccggtgcgaaag 12606541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 277 - 437
Target Start/End: Original strand, 3601034 - 3601195
Alignment:
Q  277 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgca 375  Q
    ||||||| ||| |||| |||||||| || ||| ||||||| ||||||||||| ||| | |  |||||||  |||| | ||||||| ||||||| ||||||    
T  3601034 caagttgcttgggctctagtggcaaagagctctttccaaatacgtattcggggaataccggtttcgattctcagggggaacaacgcttggccagtgcgca 3601133  T
Q  376 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||| | ||| ||||||||||||||||||   | |||||||| |||| ||||||||| |||||    
T  3601134 tgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 3601195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 437
Target Start/End: Complemental strand, 9633708 - 9633624
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||| ||||||| ||||||||| | |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 9633624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 431
Target Start/End: Original strand, 13391299 - 13391391
Alignment:
Q  339 ttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    |||||||| |||| |||||| ||||||||| ||||||||| | |||||||||||||||||||||||  || |||  || ||||||||||||||    
T  13391299 ttcgattttcaggggaacaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccatatttaatgggtcgaaaaccggtg 13391391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 437
Target Start/End: Complemental strand, 30788936 - 30788852
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||||||||||| ||||||||| | || ||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  30788936 gaacaacgtttggccagtgcgcatgcctctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 30788852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 277 - 403
Target Start/End: Complemental strand, 13036164 - 13036037
Alignment:
Q  277 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgca 375  Q
    ||||||| ||| ||||||||||||| || |||||||||| |||||||||||| |||   | ||||||||| || || |||||||  ||||||| ||||||    
T  13036164 caagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgca 13036065  T
Q  376 tgcatttacgcacgagccggattagtcg 403  Q
    ||| | |||||| ||||| |||||||||    
T  13036064 tgcctctacgcatgagccagattagtcg 13036037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 403
Target Start/End: Complemental strand, 19230720 - 19230592
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||| |||||||   | || |||||||| || | |||||||| |||| || |  |    
T  19230720 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaataccgga-ttcgattttcaagggaacaacgcttggtcagtatg 19230622  T
Q  374 catgcatttacgcacgagccggattagtcg 403  Q
    ||||| | ||||||||||||||||||||||    
T  19230621 catgcctctacgcacgagccggattagtcg 19230592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 426
Target Start/End: Complemental strand, 29444928 - 29444775
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||  ||| |||| |||||||| || |||||||||||||||||  ||||  || | | |||||||||| ||| | ||||||| ||||||| |||    
T  29444928 aaccaagttacttgggctctagtggcaaggagctccttccaaagacgtacccgggggataccgggttcgatttctagggggaacaacgcttggccagtgc 29444829  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaac 426  Q
    |||||| | |||||| ||||||||||||| |   |||||||||| |||| ||||    
T  29444828 gcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaac 29444775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 8612137 - 8611973
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | ||||| ||||||| ||| ||| ||     
T  8612137 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgt 8612038  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| || |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  8612037 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 8611973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 437
Target Start/End: Original strand, 19089444 - 19089609
Alignment:
Q  273 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattg 371  Q
    ||||||||||| ||| |||||||| |||| || ||| || ||| ||||||| || | ||| |   ||| |||| ||||| | ||||||  ||||||| ||    
T  19089444 gaaccaagttgcttgggctccagtcgcaaggagctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtg 19089543  T
Q  372 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
     |||||| | ||||||||||||||||||||||  || |||||||| |||| ||||||||| |||||    
T  19089544 agcatgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaag 19089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 5759575 - 5759623
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgta 322  Q
    |||||||||| ||| ||||||||||||| ||||||||||||| ||||||    
T  5759575 aaccaagttgcttgggctccagtggcaaggaactccttccaaggacgta 5759623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 6606260 - 6606096
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||  ||||||||| || |||||||||| ||||||| |||| ||| | | ||||||||  |||| | ||||||  ||||||| ||     
T  6606260 aaccaagttgcttgggccacagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgt 6606161  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
     ||||| | |||||| |||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  6606160 acatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 6606096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 8932608 - 8932772
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| |||| |||||||||||| ||  ||||||||| || |||| |||| |||   | |||||||| ||| || |||||||  ||||| | |||    
T  8932608 aaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgc 8932707  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| ||||||||||| || |  | ||||| || |||| ||||||||| |||||    
T  8932708 gcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaag 8932772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 8944074 - 8944238
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| |||| |||||||||||| ||  ||||||||| || |||| |||| |||   | |||||||| ||| || |||||||  ||||| | |||    
T  8944074 aaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgc 8944173  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| ||||||||||| || |  | ||||| || |||| ||||||||| |||||    
T  8944174 gcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaag 8944238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 437
Target Start/End: Original strand, 5029841 - 5029928
Alignment:
Q  350 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||||||||||| || ||||||||| | |||||| |||  |||||||||||  ||||||| || |||| |||| |||| |||||    
T  5029841 ggagaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaactggtgcgaaag 5029928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 12635793 - 12635925
Alignment:
Q  306 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 404  Q
    |||||||||| ||||||| |||| ||| |   ||| |||| ||||| ||| ||||| ||||| | ||||||||| | ||||||| |||||||||||||||    
T  12635793 ctccttccaaggacgtatccggggaataccaggtttgattcccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaagccggattagtcgc 12635892  T
Q  405 atatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
      |   |||||| |||| ||||||||| |||||    
T  12635893 ccactattggtgggtcggaaaccggtgcgaaag 12635925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 5855466 - 5855596
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||||||| ||| | | |||||||| |||||| |||||||| ||||||| |||    
T  5855466 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 5855565  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | |||||| ||| |||||||||||    
T  5855566 gcatgcctctacgcatgaggcggattagtcg 5855596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 10422732 - 10422896
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||| ||||||||| || |||||||||| |||||||||||| ||| | | |||||||||| |||| |||||||  ||||||| |||    
T  10422732 aaccaagttgtttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgc 10422831  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| |||||||||||||||   | |||||||  |||| ||||||||| |||||    
T  10422832 gcatgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaaag 10422896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 290 - 403
Target Start/End: Complemental strand, 14254416 - 14254302
Alignment:
Q  290 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcac 388  Q
    |||||| ||||| |||||| |||||| |||||||||||| ||| | ||||||||||| |||| | ||||||| ||||||| | ||||||| ||||||||     
T  14254416 ctccaggggcaaggaactcattccaaggacgtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcat 14254317  T
Q  389 gagccggattagtcg 403  Q
    |||||||||||||||    
T  14254316 gagccggattagtcg 14254302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 274 - 427
Target Start/End: Complemental strand, 40288641 - 40288487
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| |||| |||||||| || ||| |||||| |||||||||||| ||| | | |||||||||||| || |||||||| ||||||| |      
T  40288641 aaccaagttgcttgggctcgagtggcaaggagctctttccaaggacgtattcggggaataccgggttcgatttccagggggaacaacggttggccagtat 40288542  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaacc 427  Q
    |||||| | ||| |||||||||||||||||||  ||| |||||| |||| |||||    
T  40288541 gcatgcctctacacacgagccggattagtcgctcatccttggtgggtcggaaacc 40288487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 289 - 437
Target Start/End: Complemental strand, 9659327 - 9659179
Alignment:
Q  289 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 388  Q
    ||||||||||||| || ||| ||| || |||||| ||||| ||| | | |||||||| ||||| |||||||||||| | | ||||||||| ||||||||     
T  9659327 gctccagtggcaaggagctcattctaaggacgtactcggggaataccgggttcgattcccaggggaacaacgtttgactagtgcgcatgcctttacgcat 9659228  T
Q  389 gagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||||||||||   | |||||||| || | ||||||||| |||||    
T  9659227 gagccggattagtcgtccacctttggtgggttggaaaccggtgcgaaag 9659179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 17642168 - 17642004
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||| ||| || |||||||||  ||||||  | |||||| ||| |||||||| ||||| | ||||||  ||||||| |||    
T  17642168 aaccaagttgtttgggctccagtgacaaggagctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgc 17642069  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | ||||||||||||||||||||||   | |||||||| |||| |||| |||| |||||    
T  17642068 gcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaag 17642004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 11398052 - 11397889
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || |||| |||  ||| | | |||||||| | ||| |||||||||||||||| ||||    
T  11398052 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcgattccgaggggaacaacgtttggccaatgcg 11397953  T
Q  374 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
     |||| | |||||| ||| |||||||||||   | |||||||| |||| ||| ||||| |||||    
T  11397952 tatgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaag 11397889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 49078058 - 49078188
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || ||||||| || ||||||| |||| ||| | | |||||||| ||||| | ||||||  ||||||| |||    
T  49078058 aaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgc 49078157  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | |||||| |||||||||||||||    
T  49078158 gcatgcctctacgcatgagccggattagtcg 49078188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 26660082 - 26660245
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| ||  | |||| || |||||||||||| ||| | | |||||||||||| || ||||||| ||||  || | |    
T  26660082 aaccaagttgcttgggctccagtggcaaagagtttcttcgaatgacgtattcggggaataccgggttcgatttccacggggaacaacatttgatcagtac 26660181  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  26660182 gcatgcctctacgcatgagccggattagtcgc-cacctttggtgggtcggaaaccggtgcgaaag 26660245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 437
Target Start/End: Complemental strand, 32151082 - 32150922
Alignment:
Q  278 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 376  Q
    |||||| ||| ||||||||||||| || |||||||||| ||||| |||| | |||     |||||||||||||| | |||||| ||||| || |||||||    
T  32151082 aagttgtttgggctccagtggcaaggagctccttccaaggacgttttcgaggaatatcaggttcgatttccagggggaacaacatttggtcagtgcgcat 32150983  T
Q  377 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    || |||||||| |||||| |||||||||  | ||||| || ||||||||||| || |||||    
T  32150982 gcctttacgcatgagccgaattagtcgctcacctttgatgggtcgaaaaccgatgcgaaag 32150922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 437
Target Start/End: Complemental strand, 43959981 - 43959821
Alignment:
Q  278 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 376  Q
    |||||||||| ||||||||||||| |  |||||||||| ||||||  |||| |||   | |||| ||| ||||| | ||||||| ||||||| |||||||    
T  43959981 aagttgattgggctccagtggcaaggtgctccttccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcat 43959882  T
Q  377 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    || | |||||||||||||||||||||||  | |||| |||  ||| ||||||||| |||||    
T  43959881 gcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaag 43959821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 274 - 403
Target Start/End: Complemental strand, 2981095 - 2980965
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 372  Q
    |||||||||| ||| |||| |||||||| || |||||||||  ||||||| |||| ||| ||| |||||||| |||| | |||||||  ||||||| ||     
T  2981095 aaccaagttgcttgggctctagtggcaaggagctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgt 2980996  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | |||||||||| |||||||||||    
T  2980995 gcatgcctctacgcacgagtcggattagtcg 2980965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 274 - 403
Target Start/End: Complemental strand, 17092641 - 17092511
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgc 372  Q
    |||||||||| |||| ||| ||||||||  | |||||| ||  ||||||||||||||||   ||||||||||| |||| ||| ||||| ||||||| ||     
T  17092641 aaccaagttgcttgaactctagtggcaagaagctcctttcatggacgtattcgggaaatatcgagttcgattttcaggggaaacaacgattggccagtgt 17092542  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    | |||| | ||||||||||||||||||||||    
T  17092541 gtatgcctctacgcacgagccggattagtcg 17092511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 50371934 - 50371832
Alignment:
Q  338 gttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    ||||||||| ||||| |||||||| ||||||| | ||||||| | ||||||| |||||||||||||||  ||||||||||  ||| ||||||||| ||||    
T  50371934 gttcgattttcaggaagaacaacgcttggccagtacgcatgcttctacgcacaagccggattagtcgcccatctttggtggatcggaaaccggtgcgaaa 50371835  T
Q  437 gaa 439  Q
    |||    
T  50371834 gaa 50371832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 281 - 437
Target Start/End: Original strand, 16956417 - 16956574
Alignment:
Q  281 ttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgca 379  Q
    ||||||||||| || |||||| || |||||||||| ||||||  |||| ||| | | ||||| ||  |||| | ||||||||||| ||| |||||||||     
T  16956417 ttgattgagcttcaatggcaaggagctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcc 16956516  T
Q  380 tttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    | ||||||||||||||||||||| |  | |||||||| |||| ||||| ||| |||||    
T  16956517 tctacgcacgagccggattagtcactcacctttggtgggtcggaaaccagtgcgaaag 16956574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 437
Target Start/End: Original strand, 18915806 - 18915975
Alignment:
Q  269 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggcc 367  Q
    |||| |||||||||| ||| ||| ||||||||| || || ||||||| ||||||  |||| ||| | | |||||||| ||||| | ||||||  ||||||    
T  18915806 atattaaccaagttgtttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggcc 18915905  T
Q  368 attgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    | || |||||| | |||||||||||||||||||||||  | | |||||| || | ||||||||| |||||    
T  18915906 agtgtgcatgcctctacgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaag 18915975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 403
Target Start/End: Complemental strand, 46929901 - 46929772
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| |||| ||||||||  | ||||||||||||||||||  ||  |||   ||||||||||||||  ||||||||| ||||||| ||||    
T  46929901 aaccaagttgcttgggctctagtggcaagaagctccttccaaagacgtatctggagaatatcgagttcgatttccaaaagaacaacgcttggccaatgcg 46929802  T
Q  374 catgcatttacgcacgagccggattagtcg 403  Q
    ||||| |  || || |||||||||||||||    
T  46929801 catgcctccacacatgagccggattagtcg 46929772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 402
Target Start/End: Complemental strand, 48798234 - 48798105
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| | | ||||||||||||| || |||||||||| ||||||| |||| |||   | |||||||||||| || |||||||| ||| | | |||    
T  48798234 aaccaagttgttggggctccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgc 48798135  T
Q  373 gcatgcatttacgcacgagccggattagtc 402  Q
    |||||| | |||||| ||||||||||||||    
T  48798134 gcatgcctctacgcatgagccggattagtc 48798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 8763935 - 8764099
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||| ||||||| || |||||||||| ||||||  |||| |||   | ||||| || ||||| | ||||||  ||||||| |||    
T  8763935 aaccaagttgcttgggctcccgtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgc 8764034  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | ||||||||||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  8764035 gcatgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaaag 8764099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 21849304 - 21849212
Alignment:
Q  338 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 430  Q
    |||||||| ||||| |||||||| ||||| | ||||||||| | |||||||||||||||||||||||  |   |||||| |||||||||||||    
T  21849304 gttcgattcccaggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgctcactattggtgggtcgaaaaccggt 21849212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 33004179 - 33004015
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgc 372  Q
    |||||||||| ||| |||||||||   | || |||||||||| ||||||| |||| |||   |  ||||||||||||| ||| ||| | ||||||| |||    
T  33004179 aaccaagttgcttgggctccagtgatgaggagctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgc 33004080  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | ||||||||||||||||||||| |  | |  ||||| |||||||||||||| |||||    
T  33004079 gcatgcctctacgcacgagccggattagtcacccaccaatggtgggtcgaaaaccggtgcgaaag 33004015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 437
Target Start/End: Complemental strand, 41664019 - 41663856
Alignment:
Q  275 accaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcg 373  Q
    ||||||||| ||| ||||||||||||| || ||||||| || ||||||| |||| ||| | | |||||||| ||| || |||||||  |||| || ||||    
T  41664019 accaagttgtttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcg 41663920  T
Q  374 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||| | |||||| |||| ||||||||||   | | |||||| |||| ||||||||| |||||    
T  41663919 catgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 41663856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 290 - 403
Target Start/End: Complemental strand, 30927875 - 30927761
Alignment:
Q  290 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcac 388  Q
    |||||||||||| || |||||||||| ||||||   |||||||   | ||||||||||||| | |||||||| ||||||| || |||||| | ||||||     
T  30927875 ctccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcat 30927776  T
Q  389 gagccggattagtcg 403  Q
    |||||||||||||||    
T  30927775 gagccggattagtcg 30927761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 274 - 403
Target Start/End: Complemental strand, 33418279 - 33418149
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||||||||||  |||  ||| | |  ||||||| | | || | |||||| ||||||| |||    
T  33418279 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgc 33418180  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | || |||||||||||||||||||    
T  33418179 gcatgcctctatgcacgagccggattagtcg 33418149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 277 - 403
Target Start/End: Complemental strand, 47313059 - 47312933
Alignment:
Q  277 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcat 376  Q
    ||||||| ||| ||||||||||||| ||  ||||||||| |||||||  ||| ||| | | ||| |||| | ||| |||||||||||||||| |||| ||    
T  47313059 caagttgtttgggctccagtggcaacgagatccttccaaggacgtatctggggaataccgggtttgattcctaggggaacaacgtttggccagtgcgtat 47312960  T
Q  377 gcatttacgcacgagccggattagtcg 403  Q
    || | |||||| ||||| |||||||||    
T  47312959 gcctctacgcatgagccagattagtcg 47312933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 439
Target Start/End: Original strand, 2567223 - 2567386
Alignment:
Q  277 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcga-tttccaggagaacaacgtttggccattgcgca 375  Q
    ||||||| ||| ||| || |||||| || |||||||||| |||||||||||  ||| | | |||||| ||||  ||| ||||||| ||||||| ||||||    
T  2567223 caagttgtttgggcttcactggcaaggagctccttccaaggacgtattcggagaataccgggttcgattttcggggaaaacaacgcttggccagtgcgca 2567322  T
Q  376 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    ||| | ||| |||||| | |||||| ||   |||||||||| |||| ||||||||  |||||||    
T  2567323 tgcctctactcacgagtcagattagccgtccatctttggtgggtcggaaaccggtacgaaagaa 2567386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 428
Target Start/End: Original strand, 15465909 - 15466064
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||| ||| |  |||||||||| |||||||| ||| ||| |   |||||||||||| || |||||||| |||| || |||    
T  15465909 aaccaagttgtttgggctccagtgacaaagggctccttccaaggacgtatttggggaataccaggttcgatttccagggggaacaacgcttggtcagtgc 15466008  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccg 428  Q
     ||||| | |||||||||| | |||| |||||  | |||||||| |||| ||||||    
T  15466009 acatgcctctacgcacgagtctgattggtcgctcacctttggtgggtcggaaaccg 15466064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 44969673 - 44969772
Alignment:
Q  338 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||||  ||||||||||||| ||||||| || ||||||   |||||| |||||||||||||||   ||| ||||||  ||| |||||||||||||||    
T  44969673 gttcgattctcaggagaacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtggatcggaaaccggtgtgaaag 44969772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 437
Target Start/End: Original strand, 37339846 - 37339928
Alignment:
Q  355 acaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| ||||||| ||||||||| |  ||||||||||||||||||||||  | |||||||| || | ||||||||| |||||    
T  37339846 acaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaag 37339928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 352 - 437
Target Start/End: Complemental strand, 10173056 - 10172971
Alignment:
Q  352 agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||||| ||||||| ||| ||||| | |||||| ||||||||||| ||||  | |||||||| |||| ||||||||| |||||    
T  10173056 agaacaacgcttggccagtgcccatgcctctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaag 10172971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 10336477 - 10336586
Alignment:
Q  291 tccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgcacg 389  Q
    ||||||||||| || |||||||||||||||||| |||  |||   | ||||||||| || || |||||||| ||| ||| ||||||||| | |||||| |    
T  10336477 tccagtggcaaggagctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatg 10336576  T
Q  390 agccggatta 399  Q
    ||||||||||    
T  10336577 agccggatta 10336586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 26325756 - 26325920
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 372  Q
    |||||||||| | | ||||||||||||| || |||||| ||| ||||||| || | |||   | |||||||| |||| | |||||||  |||| || |||    
T  26325756 aaccaagttgctagggctccagtggcaaggagctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgc 26325855  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| |||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  26325856 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 26325920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 437
Target Start/End: Complemental strand, 4581757 - 4581682
Alignment:
Q  362 ttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||| ||||||||| | ||||||||||||||| ||||||   | |||||||| |||| ||||||||| |||||    
T  4581757 ttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaag 4581682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 278 - 403
Target Start/End: Original strand, 32819 - 32945
Alignment:
Q  278 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgcgcat 376  Q
    |||||| ||| |||||||||||||||| |||||||||| ||||||   ||| |||   | || ||||| |||||| |||||||| |||| || ||| |||    
T  32819 aagttgtttgggctccagtggcaatgagctccttccaaggacgtaccgggggaatatcgggtccgattcccaggaggaacaacgcttggtcagtgcacat 32918  T
Q  377 gcatttacgcacgagccggattagtcg 403  Q
    || | |||||| |||||| ||||||||    
T  32919 gcctctacgcatgagccgaattagtcg 32945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 13262091 - 13262157
Alignment:
Q  338 gttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 403  Q
    |||||||||||||| |||||||||||||| || | ||||||  | |||||||||| |||||||||||    
T  13262091 gttcgatttccagggagaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcg 13262157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 278 - 439
Target Start/End: Original strand, 14357703 - 14357865
Alignment:
Q  278 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcat 376  Q
    |||||| ||||||||||||||||| ||  | ||||||| |||||||  || ||||     ||||||||||||   ||| ||||||||| ||| |||||||    
T  14357703 aagttgcttgagctccagtggcaaggagtttcttccaaggacgtatctggaaaatatcaggttcgatttccaattgaaacaacgtttgaccagtgcgcat 14357802  T
Q  377 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    || | ||||||||| |||||||| |||  || | ||| || |||| ||||||||| |||||||    
T  14357803 gcctctacgcacgaaccggattaatcgtttaccattgatgggtcggaaaccggtgcgaaagaa 14357865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 16263553 - 16263619
Alignment:
Q  338 gttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 403  Q
    ||||||||||||||| |||||||| ||||||| ||||||||| | ||||||  ||||||| ||||||    
T  16263553 gttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcataagccggaatagtcg 16263619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 398
Target Start/End: Original strand, 34877934 - 34878059
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||| ||||||||| || | |||||||| |||||||||||| ||| |   |||||||| | |||  |||||||  ||||||| |||    
T  34877934 aaccaagttgtttgggcttcagtggcaaggagcaccttccaaggacgtattcggggaataccaggttcgattcctaggcggaacaacacttggccagtgc 34878033  T
Q  373 gcatgcatttacgcacgagccggatt 398  Q
    |||||| | ||| |||||||| ||||    
T  34878034 gcatgcctctacacacgagccagatt 34878059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 437
Target Start/End: Complemental strand, 45362027 - 45361882
Alignment:
Q  293 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgag 391  Q
    ||||||||| || |||||||||| ||||||  | || ||| | | ||||||||  |||||| ||||||| ||||||| |||||||||   ||||||  ||    
T  45362027 cagtggcaaggagctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgcataag 45361928  T
Q  392 ccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  45361927 ccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 45361882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 17358615 - 17358507
Alignment:
Q  294 agtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcacgagc 392  Q
    |||||||| || ||| || ||| |||||||| ||| ||| | | ||||||||  |||| ||||||||| ||| ||| ||||||||| |||||||| ||||    
T  17358615 agtggcaaggagctcatttcaaggacgtatttggggaataccgggttcgattctcagggagaacaacgcttgaccaatgcgcatgcctttacgcatgagc 17358516  T
Q  393 cggattagt 401  Q
    | |||||||    
T  17358515 ccgattagt 17358507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 353 - 401
Target Start/End: Original strand, 28416970 - 28417018
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagt 401  Q
    ||||||||||||||||  |||||||||| ||||||||| || |||||||    
T  28416970 gaacaacgtttggccagggcgcatgcatctacgcacgaacccgattagt 28417018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 431
Target Start/End: Complemental strand, 31576713 - 31576553
Alignment:
Q  272 tgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccatt 370  Q
    |||||||||||| ||| |||| |||||||| || ||| ||| || ||||||| | | |||| | | ||||||||  |||| | ||||| | ||||||| |    
T  31576713 tgaaccaagttgtttgggctctagtggcaaggagctcattctaaggacgtatcccgaaaataccgggttcgattctcaggggaaacaatgcttggccaat 31576614  T
Q  371 gcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    |||  ||| | |||||| ||||||| |||||||   ||||||| ||||||| |||||||||    
T  31576613 gcgtgtgcctctacgcatgagccggcttagtcgtccatctttgatgtgtcggaaaccggtg 31576553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 40226406 - 40226354
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcg 326  Q
    |||||||||||||| | | ||||||||| || |||||||||| ||||||||||    
T  40226406 aaccaagttgattgggtttcagtggcaaggagctccttccaaggacgtattcg 40226354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 269 - 400
Target Start/End: Complemental strand, 4195370 - 4195238
Alignment:
Q  269 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggcc 367  Q
    |||| |||||||||| ||| ||||||||||||| || ||||| |||| ||||||| |||| ||| | ||||||||||||||||| ||||||| ||||||     
T  4195370 atatcaaccaagttgcttgggctccagtggcaaggagctcctgccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggct 4195271  T
Q  368 attgcgcatgcatttacgcacgagccggattag 400  Q
    | ||||||||| | |||||| ||||||||||||    
T  4195270 agtgcgcatgcctctacgcatgagccggattag 4195238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 437
Target Start/End: Original strand, 34659174 - 34659336
Alignment:
Q  276 ccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgcgc 374  Q
    |||||||| ||| ||||||||||||| || |||||||||  || |||  |||| ||| | | |||||||| || ||| |||||||| ||| ||| |||||    
T  34659174 ccaagttgtttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgc 34659273  T
Q  375 atgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||| | |||||||||||||||||||||||  | | ||||||||||||||||||||| |||||    
T  34659274 atgcctctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaaag 34659336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 48804629 - 48804793
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| || ||| |||||||  ||||||| |||    
T  48804629 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgc 48804728  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| |||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  48804729 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 48804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 274 - 431
Target Start/End: Complemental strand, 5039581 - 5039423
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || ||||||||| ||| ||||||||| ||| | |||||||||| | |||| |||||||  |||| || |||    
T  5039581 aaccaagttgtttgggctccagtggcaaggagctccttccatagatgtattcggggaataccgagttcgattcctaggaggaacaacacttggtcagtgc 5039482  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
     ||| | | |||||| ||||||||||||||||  | ||||||||  |||||||||||||    
T  5039481 acatacctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtg 5039423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 43346942 - 43346778
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 372  Q
    |||||||||| |||  |||||||||||| || ||||||||||||||||||  ||| ||| | | |||| ||| || ||| |||||||  ||||||  |||    
T  43346942 aaccaagttgtttggactccagtggcaaggagctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgc 43346843  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||| ||||||||||||||||||  |||||||||| |||| ||||| ||| |||||    
T  43346842 gcatgcctctacgtacgagccggattagtcgctcatctttggtgggtcggaaaccagtgcgaaag 43346778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 43862135 - 43861971
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| |||| || ||||| || ||| ||||||||||||||  ||| ||| | | |||||||| ||||| | ||||||||||||||| |||    
T  43862135 aaccaagttgtttgggctctagcggcaaggagctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgc 43862036  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| ||||||||||||||    | ||||||||  ||||||||||||| |||||    
T  43862035 gcatgcctctacgcatgagccggattagtcattcacctttggtggatcgaaaaccggtgcgaaag 43861971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 277 - 431
Target Start/End: Original strand, 1797409 - 1797564
Alignment:
Q  277 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgca 375  Q
    ||||||| ||| ||||||||||||| || |||||||||| ||||||| || | ||| | | |||||||| ||||| ||| ||||| ||||||| ||||||    
T  1797409 caagttgcttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgca 1797508  T
Q  376 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    ||  | ||||||||||||||| ||||||   ||||||| ||  |||||||||||||    
T  1797509 tgtctctacgcacgagccggactagtcgtccatctttgatggatcgaaaaccggtg 1797564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 431
Target Start/End: Original strand, 16802069 - 16802227
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    ||||||||||  || |||||||||||||||| |||||||||| ||||||  |||| ||| | |  |||||||   ||||| ||||||| ||||||| |||    
T  16802069 aaccaagttgcctgggctccagtggcaatgagctccttccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgc 16802168  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    | |||| | |||||||||||||||||||||||  | | |||||| ||||||||| ||||    
T  16802169 gtatgcctctacgcacgagccggattagtcgctcaccattggtgggtcgaaaactggtg 16802227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 403
Target Start/End: Complemental strand, 17748545 - 17748415
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| |||| ||||||||  | || ||||||| |||||||||||| ||| | | |||||||| ||||| | ||||||| ||||||| |||    
T  17748545 aaccaagttgtttgggctctagtggcaagcagcttcttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgc 17748446  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | |||| |||||||||||||||||    
T  17748445 gcatgcctctacgtacgagccggattagtcg 17748415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 277 - 437
Target Start/End: Complemental strand, 5069975 - 5069814
Alignment:
Q  277 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgcgca 375  Q
    ||||||| ||| ||||||||||||| || || |||| || ||||||  |||||||| | | ||||||||||||||| |||||||| || || | || |||    
T  5069975 caagttgtttgggctccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgca 5069876  T
Q  376 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||| | ||||||| |||||||||||||||  | |||||||| |||| |||||| || |||||    
T  5069875 tgcctctacgcacaagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 5069814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 22993530 - 22993366
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| |||   | |||||||| | ||||| ||||||| ||||||| ||     
T  22993530 aaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgt 22993431  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | ||||||||| |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  22993430 gcatgcctctacgcacgaaccggattagtcgctcacctttggtgggtcagaaaccggtgcgaaag 22993366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 4228914 - 4228786
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| ||||||| ||||| || |||||||||| ||||||| || | ||| |   |||||||||||||||  |||||||||||||| |||     
T  4228914 aaccaagttgtttgggctccagcggcaaggagctccttccaaggacgtatccgaggaataccaggttcgatttccagga--acaacgtttggccagtgca 4228817  T
Q  374 catgcatttacgcacgagccggattagtcgc 404  Q
    |||||   |||||| ||||||||||||||||    
T  4228816 catgcccctacgcatgagccggattagtcgc 4228786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 274 - 431
Target Start/End: Original strand, 13095804 - 13095962
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||| ||||||| || |||||| ||| ||||||  |||| ||| | | |||| ||| ||||| | ||||||  ||||||| |||    
T  13095804 aaccaagttgcttgggctcccgtggcaaggagctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgc 13095903  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| |||| |||||||||    
T  13095904 gcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtg 13095962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 353 - 439
Target Start/End: Complemental strand, 38578950 - 38578864
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    |||||||| ||||||| ||||||||| | |||||| ||||||||||||||||  | |||||||| |||| ||||||||| |||||||    
T  38578950 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagaa 38578864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 47341822 - 47341952
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || ||| |||||| ||||||  |||| ||| | |||||||||| ||| || |||||||  ||||||| |||    
T  47341822 aaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgc 47341921  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | ||||||||||| ||||| ||||    
T  47341922 gcatgcctctacgcacgagcaggattggtcg 47341952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 439
Target Start/End: Original strand, 22573759 - 22573924
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| |||||||| ||||  | || ||||||||||  |||| ||| |||   | ||||||||| |||| ||||||| |||| ||| ||||    
T  22573759 aaccaagttgcttgggctccagtagcaagaagcttcttccaaagatatattgggggaatatcgggttcgattttcaggggaacaacatttgaccagtgcg 22573858  T
Q  374 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    ||||| |||||||| ||||||||||| |||   ||| ||| || || ||||||||||| |||||||    
T  22573859 catgcctttacgcatgagccggattaatcgtccatcattgatgggttgaaaaccggtgcgaaagaa 22573924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 10048039 - 10047875
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  10048039 aaccaagttgcttgaactccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 10047940  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||| || | |||||| |||| | ||||||||   | | |||||| |||| ||||||||| |||||    
T  10047939 gcaggcctctacgcatgagcagaattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 10047875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 42210409 - 42210299
Alignment:
Q  290 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcac 388  Q
    |||||||||||| || ||| |||||| ||||||| || | ||| | |  ||||||| |||| || ||||||||||||||| ||||||||| | |||||||    
T  42210409 ctccagtggcaaggagctctttccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcatgcctctacgcac 42210310  T
Q  389 gagccggatta 399  Q
    |||||||||||    
T  42210309 gagccggatta 42210299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 401
Target Start/End: Original strand, 43925458 - 43925586
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||| || |||||||  |||| || |||    
T  43925458 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgc 43925557  T
Q  373 gcatgcatttacgcacgagccggattagt 401  Q
    |||||| | |||||| |||| ||||||||    
T  43925558 gcatgcctctacgcatgagctggattagt 43925586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 11607080 - 11607131
Alignment:
Q  277 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcggg 328  Q
    ||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||    
T  11607080 caagttgcttgggctccagtggcaaggaactccttccaaggacgtattcggg 11607131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 436
Target Start/End: Complemental strand, 26423450 - 26423288
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| |||||||||||||  |||||||||||| ||||||  |  | ||| | | |||||||| ||||| | ||||||| ||||||| |||    
T  26423450 aaccaagttgtttgggctccagtggcaagaaactccttccaaggacgtacccaaggaataccgggttcgattcccaggggaaacaacgcttggccagtgc 26423351  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
     | ||| | |||||||||||| |||||||||   | |||||||| |||| ||||||||| ||||    
T  26423350 acctgcctctacgcacgagccagattagtcgttcacctttggtg-gtcggaaaccggtgcgaaa 26423288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 440
Target Start/End: Original strand, 27028289 - 27028392
Alignment:
Q  338 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    |||||||||||||| | ||||||  ||||||| ||||||||| | ||| || |||| |||||||||||  | |||||||| |||| ||||||||| ||||    
T  27028289 gttcgatttccagggggaacaacacttggccagtgcgcatgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 27028388  T
Q  437 gaag 440  Q
    ||||    
T  27028389 gaag 27028392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 19914865 - 19914735
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||     | ||| ||| |||||||| |||   |||||||| ||||||| ||||    
T  19914865 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctaaggaatactgggttcgattcccaaaggaacaacgcttggccaatgcg 19914766  T
Q  374 catgcatttacgcacgagccggattagtcgc 404  Q
    ||||| | |||||| ||||| ||||| ||||    
T  19914765 catgcctctacgcatgagccagattaatcgc 19914735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 370
Target Start/End: Complemental strand, 45853664 - 45853586
Alignment:
Q  293 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccatt 370  Q
    ||||||||| ||||||||||||| |||||||| ||  ||||| ||||||||||||||| |  ||||||| |||||||||    
T  45853664 cagtggcaaggaactccttccaaggacgtatttggagaatgccgagttcgatttccagtggaaacaacgattggccatt 45853586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 354 - 403
Target Start/End: Original strand, 3353451 - 3353500
Alignment:
Q  354 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| |||||||| ||||||||| | ||||||||||||||||||||||    
T  3353451 aacaacatttggccagtgcgcatgcctctacgcacgagccggattagtcg 3353500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 430
Target Start/End: Original strand, 21530694 - 21530851
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||  ||||||||||||| || |||||||||| ||||||   ||| ||| ||| ||| |||| ||| || |||||||  |||| || |||    
T  21530694 aaccaagttgcttcggctccagtggcaaggagctccttccaaggacgtacctggggaatactgggtttgattcccagggggaacaacacttggtcagtgc 21530793  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 430  Q
     ||||| | ||||||||||||| |||| ||||  | |||||||| |||| ||||||||    
T  21530794 acatgcctctacgcacgagccgaattaatcgctcacctttggtgggtcggaaaccggt 21530851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 437
Target Start/End: Complemental strand, 4706067 - 4705983
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||||||| |||||| ||||||| | ||||||||||| ||||||||||   | |||||||   |||||||||| ||||||||    
T  4706067 gaacaacgtttagccattacgcatgcttctacgcacgagctggattagtcgtccacctttggtagatcgaaaaccgatgtgaaag 4705983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 14535252 - 14535368
Alignment:
Q  289 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgca 387  Q
    |||||| |||||| ||||||||||||| |||||| || || ||| | | |||  |||| || ||||||||||  ||||||| || |||||| | ||||||    
T  14535252 gctccaatggcaaagaactccttccaaggacgtactccgggaataccgggtttcattttcagggagaacaacacttggccagtgtgcatgcctctacgca 14535351  T
Q  388 cgagccggattagtcgc 404  Q
    ||||| |||||||||||    
T  14535352 cgagctggattagtcgc 14535368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 14650263 - 14650427
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| |||  ||| |||||||| || |||||||||| ||||||  |||  |||   | |||||||||||||||| ||||| | ||| ||| |||    
T  14650263 aaccaagttgtttggactctagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgatttccaggaggaacaatgcttgaccagtgc 14650362  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
      |||| | |||||| ||||||| ||||||||  | |||||||| || ||||||||||| |||||    
T  14650363 atatgcctctacgcatgagccgggttagtcgctcacctttggtgggttgaaaaccggtgcgaaag 14650427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 21190911 - 21190779
Alignment:
Q  306 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 404  Q
    |||||||||| ||| ||| |||| ||| | | |||||||| | ||||| | ||||| ||||| | ||||||||| | |||||||||| | ||||||||||    
T  21190911 ctccttccaaggacttatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgcacgagtcagattagtcgc 21190812  T
Q  405 atatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
      |||  ||||| |||||||||||||| |||||    
T  21190811 ccatcaatggtgggtcgaaaaccggtgcgaaag 21190779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 377
Target Start/End: Complemental strand, 22268192 - 22268088
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || ||| |||||| |||||| | ||| ||| | | |||||||| ||| || ||||||| |||||||| |||    
T  22268192 aaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacttggggaataccgggttcgattcccagggggaacaacatttggccagtgc 22268093  T
Q  373 gcatg 377  Q
    |||||    
T  22268092 gcatg 22268088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 416
Target Start/End: Original strand, 23658188 - 23658268
Alignment:
Q  337 agttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtg 416  Q
    ||||||||||||||| | ||||||| ||||||| || |||||| | ||| ||||||||||||||||||   ||||||||||    
T  23658188 agttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttggtg 23658268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 28396226 - 28396166
Alignment:
Q  370 tgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 430  Q
    ||||||||| |||||||| |||||||||||||||  || |||||||| |||| ||||||||    
T  28396226 tgcgcatgcctttacgcatgagccggattagtcgtctacctttggtgggtcggaaaccggt 28396166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 437
Target Start/End: Complemental strand, 36619397 - 36619253
Alignment:
Q  294 agtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagc 392  Q
    |||||||| ||||||||| ||| |||||||| ||| ||| | | |||||||| ||||| | ||||||  ||| ||| || |||||| | |||||| ||||    
T  36619397 agtggcaaggaactccttgcaaggacgtatttggggaataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagc 36619298  T
Q  393 cggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||||||   | | |||||| ||| |||||| |||||||||    
T  36619297 cggattagtcgtccaccattggtgggtcaaaaaccagtgtgaaag 36619253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 37514899 - 37515031
Alignment:
Q  306 ctccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 404  Q
    |||||||||| ||| ||  |||| ||| ||| ||||||||| ||| | ||||||||||||| || ||||||||  | |||||||||||||||||| |||     
T  37514899 ctccttccaaggacatacccggggaatactgggttcgattttcagtgggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggattaatcgt 37514998  T
Q  405 atatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
      | | || ||| |||| |||||||||||||||    
T  37514999 tcaccattagtgggtcggaaaccggtgtgaaag 37515031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 41945503 - 41945583
Alignment:
Q  357 aacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||| ||||||| ||||||||| | ||||||||||||||||||||||   | |||||||| |||| ||| ||||| |||||    
T  41945503 aacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaag 41945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 45960165 - 45960035
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 372  Q
    |||||||||| |||||||||||| |||| || ||| |||||| |||||| ||||| ||| | ||||| |||| || |||  ||||||  |||| || |||    
T  45960165 aaccaagttgtttgagctccagtagcaaggagctctttccaaggacgta-tcggggaataccgagtttgattcccaagggcaacaacacttggtcagtgc 45960067  T
Q  373 gcatgcatttacgcacgagccggattagtcgc 404  Q
    |||||| | ||||||  |||||||||||||||    
T  45960066 gcatgcctctacgcataagccggattagtcgc 45960035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 30827302 - 30827368
Alignment:
Q  338 gttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 403  Q
    ||||||||| |||| ||||||||  ||||||| | ||||||| | ||||||||||||||||||||||    
T  30827302 gttcgattttcagggagaacaacacttggccagtacgcatgcctctacgcacgagccggattagtcg 30827368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 34127698 - 34127644
Alignment:
Q  383 acgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||||||||||||||||||  | |||||||| ||| |||||||||| |||||    
T  34127698 acgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggtgcgaaag 34127644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 401
Target Start/End: Original strand, 42032041 - 42032170
Alignment:
Q  273 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattg 371  Q
    |||| |||||| ||| |||||||| ||||  | |||||||||| ||||||  |||| ||| |   |||||||| ||| || |||||||||||||||| ||    
T  42032041 gaactaagttgtttgggctccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtg 42032140  T
Q  372 cgcatgcatttacgcacgagccggattagt 401  Q
    | ||| ||| |||||| |||||| ||||||    
T  42032141 cacatacatctacgcatgagccgaattagt 42032170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 1605951 - 1606051
Alignment:
Q  338 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    |||||||||||||| | ||||||| ||||||| ||| ||||| | || ||  ||||||||||||||||  | ||||||||  ||| ||||||||| ||||    
T  1605951 gttcgatttccagggggaacaacgcttggccagtgcacatgcctctaggcttgagccggattagtcgcccacctttggtggatcggaaaccggtgcgaaa 1606050  T
Q  437 g 437  Q
    |    
T  1606051 g 1606051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 353 - 437
Target Start/End: Complemental strand, 8734769 - 8734685
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||| || ||||||||| |  ||||||||||| ||||||||||  | |||||||| |||| ||||||||| |||||    
T  8734769 gaacaatgcttgggcagtgcgcatgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 8734685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 437
Target Start/End: Complemental strand, 24969484 - 24969325
Alignment:
Q  277 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcat 376  Q
    ||||||| ||| ||||||||||||| || ||  || ||| |||||||  || |||| | | |||||||||||||| |||||||  ||||||| ||||| |    
T  24969484 caagttgtttgggctccagtggcaaggagcttttttcaaggacgtatctggaaaataccgggttcgatttccagg-gaacaacacttggccagtgcgcgt 24969386  T
Q  377 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    || | |||| || || ||||||| ||||  ||||||| ||  ||| ||||||||| |||||    
T  24969385 gcctctacgtacaagtcggattaatcgctcatctttgatggctcggaaaccggtgcgaaag 24969325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 34127783 - 34127735
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgta 322  Q
    |||||||||| ||| |||||| |||||| ||||||||||||| ||||||    
T  34127783 aaccaagttgcttgggctccaatggcaaggaactccttccaaggacgta 34127735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 13893869 - 13894033
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||| | |||| ||| | | ||| |||||||||| | ||||||| |||| || |||    
T  13893869 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtgtccggggaataccgggttggatttccagggggaacaacgcttggtcaatgc 13893968  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | ||| |||||||||||||||||||  | ||||||||  ||||||||||||| |||||    
T  13893969 gcatgcctctacacacgagccggattagtcgcccacctttggtggatcgaaaaccggtgcgaaag 13894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 7328787 - 7328950
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| |||| |||||||| ||  ||||||||| ||||||  |||||||| | | |||||||| ||||| | ||||||  ||||||| |||    
T  7328787 aaccaagttgcttgtgctctagtggcaaggagttccttccaaggacgtacccgggaaataccgggttcgattcccagggggaacaacacttggccagtgc 7328886  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| || ||||| ||||||||||||||||  | |||||||| |||||||||||||| |||||    
T  7328887 gcatgcctt-acgcatgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcgaaag 7328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 15320129 - 15320293
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||||| ||||| ||||| | ||||||| ||     
T  15320129 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgt 15320228  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||||||||||||||||||||  | |||||||| |||  ||||||||| |||||    
T  15320229 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 15320293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 33251605 - 33251735
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||| |||||||||| |||||||||| |||||||| ||| ||| | | |||||||| || | | |||||||||||||||| ||     
T  33251605 aaccaagttgtttgggctccggtggcaatgagctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgt 33251704  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | |||||| |||||||||||||||    
T  33251705 gcatgcctctacgcatgagccggattagtcg 33251735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 29127862 - 29128026
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| ||  ||||||||| |||||||  ||| |||   | |||||||||||||| ||||||||  |||| || |||    
T  29127862 aaccaagttgtttgggctccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgc 29127961  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| |||| |||||| || |||||    
T  29127962 gcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 29128026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 54261169 - 54261333
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||   ||| ||| | | |||||||| | ||||| ||||||| ||||||| |||    
T  54261169 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgc 54261268  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| |||||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  54261269 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 54261333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 45877397 - 45877527
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || | |||||||| ||||||| |||| ||| | | |||||||||||||| | ||||||  ||||||| |||    
T  45877397 aaccaagttgtttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgc 45877496  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
     ||||| | |||||| |||||||||||||||    
T  45877497 acatgcctctacgcatgagccggattagtcg 45877527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 431
Target Start/End: Complemental strand, 55069843 - 55069685
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||| |||||| ||| || ||| ||||||||| || ||| ||| ||| |||| | |  | |||||||||||||||| |||    
T  55069843 aaccaagttgtttgggctccagtgacaatgagctcttttcaaggacgtattcagggaatactgggtttgattcctatagggaacaacgtttggccagtgc 55069744  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
     ||||| | |||||||||||||||||| ||||  | |||||||| |||| |||||||||    
T  55069743 acatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtg 55069685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 437
Target Start/End: Complemental strand, 26362051 - 26361967
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||||||||| || || |||||| | |||||||||||||||||||||||| | ||||| || |||| |||||||||||||||    
T  26362051 gaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaag 26361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 437
Target Start/End: Complemental strand, 28572371 - 28572211
Alignment:
Q  278 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcat 376  Q
    |||||| ||| ||||||||||||| || |||||| |||  ||| |  |||| ||| ||| |||||||| ||||| ||| ||||| ||||||| |  ||||    
T  28572371 aagttgcttgtgctccagtggcaaggagctcctttcaagaacgcacccggggaatactgggttcgattcccaggggaaacaacgcttggccagtatgcat 28572272  T
Q  377 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    || | |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  28572271 gcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 28572211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 277 - 403
Target Start/End: Original strand, 6462358 - 6462485
Alignment:
Q  277 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgca 375  Q
    ||||||| ||| |||| |||||||| || |||||||||| |||||||  ||| ||| | | ||||||||  |||| ||||||||| ||||||| ||||||    
T  6462358 caagttgcttgggctctagtggcaaggagctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgca 6462457  T
Q  376 tgcatttacgcacgagccggattagtcg 403  Q
    ||| | |||||| |||||||||||||||    
T  6462458 tgcctctacgcatgagccggattagtcg 6462485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 10855327 - 10855458
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || ||| | ||||||| | | ||| |||||||| || |||||||| ||||||| | |    
T  10855327 aaccaagttgtttgggctccagtggcaaggagctccttccaaggatgtacttgggaaataccgggtttgatttccagggggaacaacgcttggccagtac 10855426  T
Q  373 gcatgcatttacgcacgagccggattagtcgc 404  Q
    |||||| | ||||||||| ||| |||||||||    
T  10855427 gcatgcctctacgcacgaaccgaattagtcgc 10855458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 296 - 431
Target Start/End: Complemental strand, 15795635 - 15795500
Alignment:
Q  296 tggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccgg 395  Q
    |||| |||| |||||||||| ||||||  |||| ||| | |||||||||| ||||| |||||||| |||| || ||||||||| | ||||||||||| |     
T  15795635 tggcgatgagctccttccaaggacgtacccggggaataccgagttcgattcccaggggaacaacgcttggtcagtgcgcatgcctctacgcacgagctga 15795536  T
Q  396 attagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    |||||||||  | |  ||||| ||||||||||||||    
T  15795535 attagtcgcccaccaatggtgggtcgaaaaccggtg 15795500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 47749268 - 47749105
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||| ||| ||| |||||||||| ||||| || ||||||| ||||||| | || ||| | | |||||||| | ||| |||||||  ||||||| ||||    
T  47749268 aaccaaattgtttgggctccagtggtaatgagcttcttccaaggacgtatccagggaataccgggttcgattcctaggggaacaactcttggccagtgcg 47749169  T
Q  374 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||| | ||||||||||||| |||||||||  | |||||||  |||| |||||| || |||||    
T  47749168 catgcctctacgcacgagccgaattagtcgcccacctttggtaggtcggaaaccgatgcgaaag 47749105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 51683118 - 51682987
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||| | || |||||||||||||||||| |||| ||| |   |||||||| ||| || |||||||| ||| ||| |||    
T  51683118 aaccaagttgtttgggctccagtggcgaggagctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgc 51683019  T
Q  373 gcatgcatttacgcacgagccggattagtcgc 404  Q
    |||||| | | | |||||||||||||||||||    
T  51683018 gcatgcctctccacacgagccggattagtcgc 51682987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 3755513 - 3755643
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| |||  |||||||||||| || ||| || ||| ||||||| |||| ||| | || ||||||| ||||||| ||||||||||| ||| |||    
T  3755513 aaccaagttgcttggactccagtggcaaagagctcttttcaaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgc 3755612  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||  | |||||| |||||||||||||||    
T  3755613 gcatgtctctacgcatgagccggattagtcg 3755643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 274 - 396
Target Start/End: Original strand, 10040500 - 10040622
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| ||||||||||||| || ||||||| || ||||||  |||| |||   | ||||||||  |||| |||||||| ||||||| ||||    
T  10040500 aaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtacccggggaatatcgggttcgattctcaggggaacaacgcttggccagtgcg 10040599  T
Q  374 catgcatttacgcacgagccgga 396  Q
    ||||| | |||||||||||||||    
T  10040600 catgcctctacgcacgagccgga 10040622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 39849015 - 39849145
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||| | ||| ||||||||||||| || |||||||||| |||||| || || |||   | |||||||| ||||  |||||||| ||||||| || |    
T  39849015 aaccaagtcgcttgggctccagtggcaaggagctccttccaaggacgtactcagggaatttcgggttcgattcccagaggaacaacgcttggccagtgtg 39849114  T
Q  374 catgcatttacgcacgagccggattagtcgc 404  Q
    ||||| | |||||| ||||||||||||||||    
T  39849115 catgcctctacgcatgagccggattagtcgc 39849145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 7310867 - 7310703
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 372  Q
    |||||||||||||| ||||| |||||||||| ||||||||||  |||||   | | ||| | | |||||||| |||| | |||||||  ||| ||  ||     
T  7310867 aaccaagttgattgggctccggtggcaatgagctccttccaagaacgtacctgaggaataccgggttcgattcccagtgggaacaacacttgcccggtgt 7310768  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||||||||||||||||||||  |||||||||| |||| |||||| || |||||    
T  7310767 gcatgcctctacgcacgagccggattagtcgctcatctttggtgggtcggaaaccgatgcgaaag 7310703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 3507617 - 3507534
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    |||||||  ||||||| ||||||||| | |||||||||||||||||||||||  | |||||||| |||| ||||||||| ||||    
T  3507617 gaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 3507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 42412938 - 42412807
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||| |||| ||| | | |||||||| || || | ||||||| ||||| | |||    
T  42412938 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgc 42412839  T
Q  373 gcatgcatttacgcacgagccggattagtcgc 404  Q
     ||||| | |||||| ||||||||||||||||    
T  42412838 ccatgcctctacgcatgagccggattagtcgc 42412807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 274 - 403
Target Start/End: Complemental strand, 26207965 - 26207835
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || |||  |||| ||| | | |||||||| ||| || |||||||| ||| ||| ||     
T  26207965 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgt 26207866  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | |||||| |||||||||||||||    
T  26207865 gcatgcctctacgcatgagccggattagtcg 26207835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 274 - 439
Target Start/End: Original strand, 35315899 - 35316065
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||  |||   | |||||||| ||| || |||||||  ||||||| |||    
T  35315899 aaccaagttgtttgggctccagtggcaaagagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgc 35315998  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    |||||| | |||||| |||| |||||||||||  |  ||||||| |||| |||||| || |||||||    
T  35315999 gcatgcctctacgcatgagctggattagtcgcccacttttggtgggtcggaaaccgatgcgaaagaa 35316065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 402
Target Start/End: Original strand, 29135856 - 29135985
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||| ||| ||| ||||||||||||| || || ||||||| ||||||| |||| ||| | |  ||||||| ||||| | ||||||  ||||||| |||    
T  29135856 aaccaaattgcttgggctccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgc 29135955  T
Q  373 gcatgcatttacgcacgagccggattagtc 402  Q
    |||||| | |||||| ||||||||||||||    
T  29135956 gcatgcctctacgcatgagccggattagtc 29135985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 8164576 - 8164660
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||| ||||||| ||||||||| |||||||||||| ||||||||||||  | ||||||||  ||| ||| ||| |||||||    
T  8164576 gaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtggatcggaaatcggcgtgaaag 8164660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 405
Target Start/End: Original strand, 28242221 - 28242353
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||||||||| |||| || || |||||||||| ||||||| |||  ||| | | ||| |||| ||||||| ||||| ||||||||| |||    
T  28242221 aaccaagttgcttgagctccggtggtaaagagctccttccaatgacgtatccggagaataccgggttagattgccaggaggaacaatgtttggccagtgc 28242320  T
Q  373 gcatgcatttacgcacgagccggattagtcgca 405  Q
     ||||| | || ||| ||| |||||||||||||    
T  28242321 acatgcctctatgcatgaggcggattagtcgca 28242353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 41630676 - 41630512
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||| ||| || |||||||||  ||||||  ||| |||| | | |||| ||| ||| || |||||||| ||| ||| |||    
T  41630676 aaccaagttgtttgggctccagtgacaaggagctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagtgc 41630577  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | ||| || ||||||||||||||||  | |||||||  |||| |||| ||||||||||    
T  41630576 gcatgcctctacacatgagccggattagtcgcccacctttggttggtcggaaactggtgtgaaag 41630512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 390
Target Start/End: Original strand, 49082772 - 49082884
Alignment:
Q  279 agttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatg 377  Q
    ||||| ||| ||||||||||||  || ||||||| || ||||||| |||| ||| | |||||||||| ||| ||||||||||| || |||| ||||||||    
T  49082772 agttgtttgggctccagtggcagggagctccttctaaggacgtatccggggaataccgagttcgattcccagggagaacaacgcttagccagtgcgcatg 49082871  T
Q  378 catttacgcacga 390  Q
    ||| ||| |||||    
T  49082872 catctacacacga 49082884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 440
Target Start/End: Complemental strand, 29762319 - 29762152
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || ||||||||| |||   | || |||||  |||| | ||||||  ||||||| |||    
T  29762319 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgc 29762220  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaag 440  Q
    |||||| | || ||| |||| ||||||||||   | | |||||| |||| ||||||||| ||||||||    
T  29762219 gcatgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagaag 29762152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 47164158 - 47164213
Alignment:
Q  382 tacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||||||||||||||||||  ||||||||||  ||| |||||||||||||||    
T  47164158 tacgcacgagccggattagtcgctcatctttggtggatcggaaaccggtgtgaaag 47164213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 25294903 - 25295033
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | ||| |||| ||  ||  ||||||  ||||||| |||    
T  25294903 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgc 25295002  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | || ||| |||||||||||||||    
T  25295003 gcatgcctctatgcatgagccggattagtcg 25295033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 375
Target Start/End: Original strand, 50682420 - 50682522
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| |||||||| ||||||||  | ||||||| || ||||||||||| ||||   | |||||||||| | ||||||||||| ||||||| |||    
T  50682420 aaccaagttgtttgagctctagtggcaagaagctccttcgaatgacgtattcggaaaatatagggttcgatttctagggagaacaacgcttggccagtgc 50682519  T
Q  373 gca 375  Q
    |||    
T  50682520 gca 50682522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 338 - 426
Target Start/End: Complemental strand, 30767347 - 30767258
Alignment:
Q  338 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaac 426  Q
    |||||||||||||| | ||||||  ||||||| || |||||| | |||||||||||||||||||||||  | |||||||| |||| ||||    
T  30767347 gttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaac 30767258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 41219537 - 41219661
Alignment:
Q  275 accaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcg 373  Q
    ||||||||| ||| ||||| || ||||||| ||||||| || ||||||| |||||| | |  |||||||||  |||||| ||||||||||||||| ||||    
T  41219537 accaagttgcttgggctcccgttgcaatgagctccttctaaggacgtatacgggaa-taccaagttcgattctcaggaggaacaacgtttggccagtgcg 41219635  T
Q  374 catgcatttacgcacgagccggatta 399  Q
     |||| | | ||||||||| ||||||    
T  41219636 tatgcctctgcgcacgagctggatta 41219661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 429
Target Start/End: Original strand, 26043819 - 26043911
Alignment:
Q  338 gttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccgg 429  Q
    |||||||| ||||| ||||||||  ||||||| ||||||||| | |||||| ||||||||||||||||  | |||||||| |||  |||||||    
T  26043819 gttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgagtcagaaaccgg 26043911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 43330799 - 43330739
Alignment:
Q  370 tgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 430  Q
    ||||||||| | |||||||||||||||||||||||  | |||||||| ||| |||||||||    
T  43330799 tgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggt 43330739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 7648763 - 7648814
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 404  Q
    |||||||||||| ||| ||||||| | | |||||||||||||||||||||||    
T  7648763 gaacaacgtttgaccagtgcgcatacctctacgcacgagccggattagtcgc 7648814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 437
Target Start/End: Complemental strand, 36043729 - 36043674
Alignment:
Q  382 tacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  36043729 tacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 36043674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 278 - 427
Target Start/End: Complemental strand, 22405703 - 22405553
Alignment:
Q  278 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 376  Q
    |||||| ||| ||||||||||||| || ||||| |||| ||||||| || ||||| | |  ||| |||  |||||| ||||||| ||  ||| |||| ||    
T  22405703 aagttgtttgggctccagtggcaaggagctcctaccaatgacgtatccgtgaaataccggattctattctcaggaggaacaacgcttaaccaatgcgaat 22405604  T
Q  377 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaacc 427  Q
    || |||| ||||||||||||||| |||   |||||||||| |||| |||||    
T  22405603 gcctttatgcacgagccggattaatcgtccatctttggtgcgtcggaaacc 22405553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 400
Target Start/End: Complemental strand, 34460597 - 34460547
Alignment:
Q  350 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattag 400  Q
    ||||||||||||||||||| || |||||| |  ||||||||||||||||||    
T  34460597 ggagaacaacgtttggccagtgtgcatgcctccacgcacgagccggattag 34460547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 431
Target Start/End: Complemental strand, 35923707 - 35923629
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    |||||||||||||||| ||||||||| | || ||||||| || ||||||||   ||||||| ||  |||||||||||||    
T  35923707 gaacaacgtttggccagtgcgcatgcctctaagcacgagtcgaattagtcgtccatctttgatggatcgaaaaccggtg 35923629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 49198294 - 49198424
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||| ||| ||  | ||||||| ||| ||| |||| ||| | | |||||||| | ||| | ||||||  ||||||| |||    
T  49198294 aaccaagttgtttgggctccagtgacaaggagtttcttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgc 49198393  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | |||||| |||||||||||||||    
T  49198394 gcatgcctctacgcatgagccggattagtcg 49198424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 306 - 399
Target Start/End: Complemental strand, 52364932 - 52364838
Alignment:
Q  306 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggatta 399  Q
    |||||||||| ||||||  |||| ||| | |||||||||| |||| || ||||||| ||| ||| ||||||||| | ||||||||||| ||||||    
T  52364932 ctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgcacgagctggatta 52364838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 437
Target Start/End: Complemental strand, 15085030 - 15084945
Alignment:
Q  352 agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||||| ||||||| || |||| | | |||| ||||||  |||||||||  |||||||||||  ||| |||||||||||||||    
T  15085030 agaacaacggttggccagtgtgcatacctctacgtacgagctagattagtcgtctatctttggtggatcggaaaccggtgtgaaag 15084945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 437
Target Start/End: Original strand, 47219106 - 47219251
Alignment:
Q  293 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgag 391  Q
    |||||| ||||| ||| |||||| ||||||| |||| ||| |   |||||||| ||| | ||| ||||| ||||| | ||||||||| | |||||| |||    
T  47219106 cagtggtaatgagctctttccaaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgag 47219205  T
Q  392 ccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||||||||   | ||||| || |||| ||||||||| |||||    
T  47219206 ccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaag 47219251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 431
Target Start/End: Complemental strand, 50405686 - 50405609
Alignment:
Q  354 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    ||||||| ||| ||| ||||||||| | |||||||||| ||||||||||||  | | |||||| |||| |||||||||    
T  50405686 aacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtg 50405609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 401
Target Start/End: Original strand, 4638161 - 4638225
Alignment:
Q  338 gttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagccggattagt 401  Q
    |||||||| ||||||||| ||||| ||| ||| ||||||| | | ||||||||||||||||||||    
T  4638161 gttcgattcccaggagaaacaacgcttgaccagtgcgcatacctctacgcacgagccggattagt 4638225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 7650234 - 7650334
Alignment:
Q  338 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    |||||||||||||| | ||||||  ||||||| | || |||  | |||||||||||||||||||||||  | |||||||| || | ||||||||| ||||    
T  7650234 gttcgatttccagggggaacaacacttggccagtacgaatgtctctacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaa 7650333  T
Q  437 g 437  Q
    |    
T  7650334 g 7650334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 48341963 - 48342011
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgta 322  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||    
T  48341963 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgta 48342011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 52011132 - 52011084
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgta 322  Q
    |||||||||| |||| || ||||||||| ||||||||||||| ||||||    
T  52011132 aaccaagttgtttgaacttcagtggcaaggaactccttccaaggacgta 52011084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 7747217 - 7747381
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| | ||||| ||||||||||||||| ||     
T  7747217 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgt 7747316  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| |||||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  7747317 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 7747381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 22593078 - 22593207
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| |||||||||||| ||| || |||||||| ||||||| |||    
T  22593078 aaccaagttgcttgtgctccagtggcaaggagctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgc 22593176  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | |||||| |||||||||||||||    
T  22593177 gcatgcctctacgcatgagccggattagtcg 22593207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 10026779 - 10026615
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| |||||| |||||| || |||||||||| |||||| |||| |||| | | ||||||||  |||| | ||||||||||||||| |||    
T  10026779 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtactcggaaaataccgggttcgattctcagggggaacaacgtttggccagtgc 10026680  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| ||||  |||||||||    
T  10026679 gcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaactagtgtgaaag 10026615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 18902693 - 18902529
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||| ||||| ||| | | |||||||| ||| || |||||||| ||| ||| |||    
T  18902693 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgc 18902594  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    || ||  | |||||||||||| ||||||||||  | |||||||| |||| ||||||||| |||||    
T  18902593 gcgtgtctctacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 18902529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 38005345 - 38005509
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| ||| |||||||| || ||| |||||||| ||||||| |||    
T  38005345 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgc 38005444  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | ||| || ||||||||||||||||  | ||||||||  ||| |||| |||| |||||    
T  38005445 gcatgcctctacacatgagccggattagtcgcccacctttggtggatcggaaactggtgcgaaag 38005509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 431
Target Start/End: Original strand, 21286390 - 21286545
Alignment:
Q  277 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgca 375  Q
    ||||||| ||||||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||||| | ||||||| ||| ||| ||||||    
T  21286390 caagttgtttgagctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgca 21286489  T
Q  376 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    ||| | ||||||||||| ||||||||| |  ||| |||||| || | |||||||||    
T  21286490 tgcctctacgcacgagctggattagtcactcatcattggtgggttggaaaccggtg 21286545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 29653571 - 29653701
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||||||||| ||||||| |||||| || |||||| | |  ||||||||||| ||| ||||||| |||| || |||    
T  29653571 aaccaagttgtttg-gctccagtggcaatgaacttcttccaaggacgtactccggaaataccggattcgatttccagggaaaacaacgcttgggcagtgc 29653669  T
Q  373 gcatgcatttacgcacgagccggattagtcgc 404  Q
    |||||| | ||||||||||||| |||||||||    
T  29653670 gcatgcctctacgcacgagccgaattagtcgc 29653701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 278 - 431
Target Start/End: Original strand, 7787003 - 7787157
Alignment:
Q  278 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 376  Q
    |||||| ||| ||||||||||||| ||||||||| | | ||||||  |||| ||| | | |||||||||||||| | |||||   ||||||| | |||||    
T  7787003 aagttggttgggctccagtggcaaggaactcctttctaggacgtacccggggaataccgggttcgatttccagggggaacaatacttggccagtacgcat 7787102  T
Q  377 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    || | |||||||||||||||||||||||  ||||||||||  |||||||||||||    
T  7787103 gcctctacgcacgagccggattagtcgcccatctttggtggatcgaaaaccggtg 7787157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 402
Target Start/End: Complemental strand, 13026574 - 13026445
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||||| | || |||   | ||||||||  ||||| |||||| | ||||||| |||    
T  13026574 aaccaagttgattgaactccagtggcaaggaactccttccaaggacgtatccagggaatatcgggttcgattatcaggaggaacaatgattggccagtgc 13026475  T
Q  373 gcatgcatttacgcacgagccggattagtc 402  Q
    |||||| | |||||| ||||||||||||||    
T  13026474 gcatgcctctacgcatgagccggattagtc 13026445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 425
Target Start/End: Complemental strand, 45263827 - 45263678
Alignment:
Q  277 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgca 375  Q
    ||||||| ||| ||||||||||||| || |||||| |||| |  ||| |||| ||| | | |||||||| |||| | |||||||| ||||||| ||||||    
T  45263827 caagttgtttgggctccagtggcaaggagctcctttcaaaaatttatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgca 45263728  T
Q  376 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaa 425  Q
    ||| | |||||||||||||||||| ||||  |||||||||| ||||||||    
T  45263727 tgcctctacgcacgagccggattaatcgctcatctttggtgggtcgaaaa 45263678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 331444 - 331608
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| |||||||||||||||| ||| |||||| ||||||  |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  331444 aaccaagttgcttgggctccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 331543  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| || | ||||| || ||||||    
T  331544 gcatgcttctacgcatgagccggattagtcgcccacctttggtgggttggaaaccagtatgaaag 331608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 290 - 437
Target Start/End: Complemental strand, 25540551 - 25540403
Alignment:
Q  290 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcac 388  Q
    |||||||||||| || ||| |||||| |||||||  ||| ||| ||| |||||||| | ||| | ||||||| ||||||| ||||||||| | |||||||    
T  25540551 ctccagtggcaaggagctcattccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcac 25540452  T
Q  389 gagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||||||||||   | |||||||| |||| ||||||||| |||||    
T  25540451 gagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 25540403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 274 - 428
Target Start/End: Complemental strand, 42770814 - 42770659
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| || ||||| | | |||| |||  |||| | ||||||| ||||||| |||    
T  42770814 aaccaagttgcttgggctccagtggcaaagagctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgc 42770715  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccg 428  Q
    |||||| | | |||||||||||||||| |||   | |||||||| |||||||||||    
T  42770714 gcatgcctcttcgcacgagccggattaatcgtccacctttggtgggtcgaaaaccg 42770659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 44945537 - 44945700
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| |||| |||||||| || |||||||||| |||||| ||||  ||| ||| ||| |||| ||||  |||||||| ||||  | ||||    
T  44945537 aaccaagttgcttgggctcaagtggcaaggagctccttccaaggacgtactcggagaatactgggtttgattcccagaggaacaacgcttggatagtgcg 44945636  T
Q  374 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||| | |||||||||||||||||||||||  | |||| |||  ||| ||||||||| |||||    
T  44945637 catgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaag 44945700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 439
Target Start/End: Original strand, 2550811 - 2550977
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||| ||| ||||||| |||| |||   | |||||||| |||||| |||||||  || |||| |||    
T  2550811 aaccaagttgcttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgc 2550910  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    |||||  | |||||| ||||||||||||||||  |  ||||||| || ||||||||||| |||||||    
T  2550911 gcatgtctctacgcatgagccggattagtcgcccacttttggtgggttgaaaaccggtgcgaaagaa 2550977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 29422158 - 29422288
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 372  Q
    |||||||||| ||| |||||||| |||| || |||||| ||| ||||||  |||| ||| ||| ||||||||||||| | |||||||  ||||||| ||     
T  29422158 aaccaagttgtttgggctccagtagcaaggagctcctttcaaggacgtacccggggaatactgggttcgatttccagagggaacaacacttggccaatga 29422257  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||| | ||||||||||||||||||||||||    
T  29422258 gcatacctttacgcacgagccggattagtcg 29422288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 439
Target Start/End: Complemental strand, 6358316 - 6358148
Alignment:
Q  272 tgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccatt 370  Q
    |||||| ||||| ||| |||||||||||||  | ||| ||| || ||||||| |||| ||| |    ||||||||||||| | ||||||  ||||||| |    
T  6358316 tgaaccgagttgtttgggctccagtggcaagaagctcattcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagt 6358217  T
Q  371 gcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    |||||||| | |||||| |||||||||||||||   | | |||||| ||||||||||||||||||||||    
T  6358216 gcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccggtgtgaaagaa 6358148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 8410074 - 8410238
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||  |||   | |||||||| ||||| | ||||||  ||||||| |||    
T  8410074 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgc 8410173  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||||||||||||||||||||  |  ||||| | |||| ||||||||| |||||    
T  8410174 gcatgcctctacgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgcgaaag 8410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 10823035 - 10823167
Alignment:
Q  306 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 404  Q
    |||||||||| ||||||  |||| ||| | | ||| |||| ||||||| ||||||| ||||||| ||||||||| | |||||||||||||||||||||||    
T  10823035 ctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgc 10823134  T
Q  405 atatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
      | |||| ||| |||| ||||||||| |||||    
T  10823135 ccaccttttgtgggtcggaaaccggtgcgaaag 10823167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 291 - 437
Target Start/End: Original strand, 41220595 - 41220742
Alignment:
Q  291 tccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacg 389  Q
    ||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| |||||| |||||||| ||||||| ||||||||| | |||||| |    
T  41220595 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 41220694  T
Q  390 agccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||| ||||||||   | |||| ||| |||| ||||||||| |||||    
T  41220695 agccgaattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 41220742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 317 - 403
Target Start/End: Original strand, 35946725 - 35946811
Alignment:
Q  317 gacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 403  Q
    ||||||| |||| ||| | |||||||||| | ||| |||||||| |||||||||| |||||| | ||||||||||||||||||||||    
T  35946725 gacgtatccggggaataccgagttcgattcctaggggaacaacgcttggccattgtgcatgcctctacgcacgagccggattagtcg 35946811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 274 - 431
Target Start/End: Complemental strand, 39201671 - 39201513
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||||||| |||  |||||||| || |||||||||| |||||| ||| | ||| | || |||||||  |||| | ||||| ||||||||| ||     
T  39201671 aaccaagttgattgggctatagtggcaaggagctccttccaaggacgtactcgaggaataccgaattcgattctcagggggaacaatgtttggccagtgt 39201572  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| |||||||||    
T  39201571 gcatgcctctacgcatgagccggattagtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 272 - 437
Target Start/End: Original strand, 44139425 - 44139591
Alignment:
Q  272 tgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccatt 370  Q
    |||||||||||| ||| ||||||||||  | ||||||||||||| || | ||  ||| ||| | | |||||||| ||||| | ||||||| ||||||| |    
T  44139425 tgaaccaagttgcttgggctccagtggtgaggaactccttccaaggatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagt 44139524  T
Q  371 gcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||| ||| | |||||||||||||||||||||||  | |  ||||| |||| ||||||||| |||||    
T  44139525 gcgcgtgcctctacgcacgagccggattagtcgcccaccaatggtgggtcggaaaccggtgcgaaag 44139591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 437
Target Start/End: Original strand, 37560119 - 37560280
Alignment:
Q  277 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgcgca 375  Q
    ||||||| ||| |||||||||| ||  | |||||||||| ||||||  || | ||| |   |||||||| || ||| ||||||||||||| || ||||||    
T  37560119 caagttgtttgggctccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgca 37560218  T
Q  376 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||| | |||||||||||||||||| |||   | ||||| || ||||||||||||||||||||    
T  37560219 tgcctctacgcacgagccggattaatcgtccacctttgatgggtcgaaaaccggtgtgaaag 37560280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 12455317 - 12455417
Alignment:
Q  338 gttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    |||||||||||||| ||| ||||| || |||| ||||||||| | |||||||||||||||||||||||  | | |||||| |||| ||||||||| ||||    
T  12455317 gttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcgaaa 12455416  T
Q  437 g 437  Q
    |    
T  12455417 g 12455417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 12864167 - 12864331
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||| ||| || |||||||||| |||||||||||| ||| | |  ||||||||||| || |||||||  |||| || |||    
T  12864167 aaccaagttgtttgggctccagtgacaaggagctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgc 12864266  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | | |||| ||||| |||||||||   | | |||||| |||| ||||||||| |||||    
T  12864267 gcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 12864331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 273 - 440
Target Start/End: Original strand, 38962705 - 38962873
Alignment:
Q  273 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattg 371  Q
    ||||||||||| |||  ||||||||| || || ||| || ||| ||||||| |||| ||| | | ||||||||| |||||| ||||||| ||||||| ||    
T  38962705 gaaccaagttgtttggactccagtggtaaggagctcatttcaaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtg 38962804  T
Q  372 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaag 440  Q
    ||||||| | |||||| || ||||||||||||   | |||||||| |||  |||| |||| ||||||||    
T  38962805 cgcatgcctctacgcatgaaccggattagtcgtccacctttggtgggtcagaaactggtgcgaaagaag 38962873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 21180477 - 21180346
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  ||   ||| | |  ||||||| ||| ||||||||||  ||||||| |||    
T  21180477 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtgc 21180378  T
Q  373 gcatgcatttacgcacgagccggattagtcgc 404  Q
     ||||| | |||||||||||||||||||||||    
T  21180377 acatgcctctacgcacgagccggattagtcgc 21180346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 439
Target Start/End: Complemental strand, 9360830 - 9360745
Alignment:
Q  354 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    ||||||||||||||| ||||||||| | ||||||||||||| |||||||||  | |||| ||| | || ||||||||| |||||||    
T  9360830 aacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttagtgggccggaaaccggtgcgaaagaa 9360745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 431
Target Start/End: Original strand, 24179576 - 24179669
Alignment:
Q  338 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    ||||||||  |||| |||||||||||||||| ||| ||||| | |||||| |||||||||||||||   |||||||||| ||  ||||||||||    
T  24179576 gttcgattctcaggggaacaacgtttggccagtgcacatgcctctacgcatgagccggattagtcgtccatctttggtgggttaaaaaccggtg 24179669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 2528504 - 2528340
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||| ||| ||| |||||||||||||||| |||||||||| |||||| ||| | ||  | | |||||||| ||| || |||||||| |||| || ||     
T  2528504 aaccaaattgtttgggctccagtggcaatgagctccttccaaggacgtactcgaggaacaccgggttcgattcccagggggaacaacgcttggtcagtgt 2528405  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | ||| ||  |||||||||||||||  |||||| ||| |||| |||| |||| |||||    
T  2528404 gcatgcctctacacataagccggattagtcgctcatctttagtgagtcggaaactggtgcgaaag 2528340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 14169772 - 14169608
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||| ||| ||  || |||||| |||||||||||| |||   | |||||||| ||| || |||||||  ||| ||| |||    
T  14169772 aaccaagttgtttgggctccagtgacaaggagatctttccaaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgc 14169673  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||  | |||||| |||||||||||||||  || | |||||| |||| ||||||||| |||||    
T  14169672 gcatgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaag 14169608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 15079426 - 15079557
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||| ||||||| |||| |||||||| ||||||  |||| ||| | | |||||||||||| || |||||||| ||| ||| ||     
T  15079426 aaccaagttgcttgggctccggtggcaaggaacaccttccaaggacgtacccggggaatacagggttcgatttccagggggaacaacgcttgaccagtgt 15079525  T
Q  373 gcatgcatttacgcacgagccggattagtcgc 404  Q
    |||||  | ||||||||||||  |||||||||    
T  15079526 gcatgactctacgcacgagccaaattagtcgc 15079557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 293 - 439
Target Start/End: Original strand, 16034899 - 16035046
Alignment:
Q  293 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgag 391  Q
    |||||| || ||||||||||||| ||||||| || | ||| | | ||||||||| |||| | ||||||| ||| ||| || |||||| | |||| |||||    
T  16034899 cagtggtaaggaactccttccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgag 16034998  T
Q  392 ccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    |||||||||||||  | | ||| || |||| ||||||||| |||||||    
T  16034999 ccggattagtcgctcaccattgatgagtcggaaaccggtgcgaaagaa 16035046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 25549686 - 25549801
Alignment:
Q  289 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgca 387  Q
    ||||||||||||| || ||||||||||  ||||||| ||| ||| ||| ||||||||   ||| | |||||| |||||| | ||| ||||| | ||||||    
T  25549686 gctccagtggcaaggagctccttccaagtacgtatttggggaatactgggttcgattcttagggaaaacaacatttggctagtgcacatgcctctacgca 25549785  T
Q  388 cgagccggattagtcg 403  Q
    ||||||||||||||||    
T  25549786 cgagccggattagtcg 25549801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 436
Target Start/End: Complemental strand, 20612699 - 20612534
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga--gaacaacgtttggccattg 371  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |  ||||||||| ||| | | ||||||||  |||||  |||||||  ||||||| ||    
T  20612699 aaccaagttgcttgggctccagtggcaaggagctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtg 20612600  T
Q  372 cgcatgcatttacgcacgagcc-ggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    ||||||| | || ||| ||||| ||||||||||   | | |||||| |||| ||||||||| ||||    
T  20612599 cgcatgcctctatgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 20612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 34130400 - 34130335
Alignment:
Q  338 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 403  Q
    ||||||||| ||||||||||||||||| ||||||| ||||  | |||||| ||||| |||||||||    
T  34130400 gttcgattttcaggagaacaacgtttgaccattgcacatgtctctacgcatgagccagattagtcg 34130335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 27725963 - 27726047
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | ||||||| ||||||||| | ||||||| |||||||||||||||  | |  ||||| |||| |||||||||||||||    
T  27725963 gaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaaccggtgtgaaag 27726047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 41032068 - 41031905
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||| ||| ||| ||||||||||||| || |||||||||| ||||||   |||||   | | |||||||| ||||| | ||||||  ||||||| ||     
T  41032068 aaccaaattgcttgggctccagtggcaaggagctccttccaaggacgtaccagggaacaccgg-gttcgattcccagggggaacaacacttggccagtgt 41031970  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | ||||||||||||||||||||| |  | |||||||| |||| ||||| ||| |||||    
T  41031969 gcatgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgcgaaag 41031905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 436
Target Start/End: Complemental strand, 10046639 - 10046477
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| |||||| |||||| || ||||||||||  |||||| |||  ||| | | |||||||| || |||  ||||||||||| | | |||    
T  10046639 aaccaagttgcttgggctccaatggcaaggagctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacgtttgac-agtgc 10046541  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| ||||  ||||||||    
T  10046540 gcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaactagtgtgaaa 10046477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 349
Target Start/End: Complemental strand, 20963268 - 20963198
Alignment:
Q  278 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca 349  Q
    |||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | ||||||||||||||    
T  20963268 aagttgtttgggctccagtggcaaggacctccttccaatgacgtatccggggaatac-gagttcgatttcca 20963198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 364
Target Start/End: Original strand, 29697467 - 29697558
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcggga-aatgctgagttcgatttccaggagaacaacgtttg 364  Q
    ||||||| || ||| ||||||||||||| |||||||||||||  |||||  ||| | ||| ||||||| |||| ||||| ||||||||||||    
T  29697467 aaccaaggtgtttgggctccagtggcaaggaactccttccaataacgtacacggaagaatactgagtttgattcccaggggaacaacgtttg 29697558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 387
Target Start/End: Complemental strand, 40969083 - 40968964
Alignment:
Q  269 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggcc 367  Q
    ||||||||||||||| ||| |||| |||||||||||  || |||||| |||||  || || ||| | | |||||||||||| ||| |||||||||||| |    
T  40969083 atatgaaccaagttgcttgggctctagtggcaatgagttcattccaaggacgttctcagggaataccgggttcgatttccagggaaaacaacgtttggtc 40968984  T
Q  368 attgcgcatgcatttacgca 387  Q
    | |||| |||| | ||||||    
T  40968983 agtgcgaatgcctctacgca 40968964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 437
Target Start/End: Complemental strand, 3811856 - 3811690
Alignment:
Q  272 tgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccatt 370  Q
    |||||||||||| |||  || || |||||| ||||||||||||| |||||| ||| | |||   | |||||||| |||| | |||||||  |||| || |    
T  3811856 tgaaccaagttgtttggtcttcaatggcaaggaactccttccaaggacgtactcgaggaatatcgggttcgattcccagagggaacaacacttggtcaat 3811757  T
Q  371 gcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||| | |||||| ||||||||||| ||||  | |||||||| |||  |||||| || |||||    
T  3811756 gcgcatgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaaccgatgcgaaag 3811690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 16813312 - 16813198
Alignment:
Q  289 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 388  Q
    |||||| || ||| || |||||||||| |||||| ||||  ||| |  ||||| | || |||| |||||||||||| ||| | ||||||| | || ||||    
T  16813312 gctccactgacaaggagctccttccaaggacgtactcggagaataccaagttcaactttcaggggaacaacgtttgaccagtacgcatgcctctatgcac 16813213  T
Q  389 gagccggattagtcg 403  Q
    |||||||||||||||    
T  16813212 gagccggattagtcg 16813198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 16852591 - 16852477
Alignment:
Q  289 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 388  Q
    |||||| || ||| || |||||||||| |||||| ||||  ||| |  ||||| | || |||| |||||||||||| ||| | ||||||| | || ||||    
T  16852591 gctccactgacaaggagctccttccaaggacgtactcggagaataccaagttcaactttcaggggaacaacgtttgaccagtacgcatgcctctatgcac 16852492  T
Q  389 gagccggattagtcg 403  Q
    |||||||||||||||    
T  16852491 gagccggattagtcg 16852477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 28525554 - 28525489
Alignment:
Q  339 ttcgatttccaggag--aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtc 402  Q
    ||||||||||||| |  ||||||  ||||||| ||||||||| | |||||||||||||||||||||    
T  28525554 ttcgatttccagggggaaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 28525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 34356149 - 34356275
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || ||  |||||| |||||||  ||| ||| | | |||||||||||| || |||||||  |||| || |||    
T  34356149 aaccaagttgtttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgc 34356248  T
Q  373 gcatgcatttacgcacgagccggatta 399  Q
    |||||| | || ||| |||||||||||    
T  34356249 gcatgcctctatgcatgagccggatta 34356275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 402
Target Start/End: Complemental strand, 39807033 - 39806919
Alignment:
Q  289 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgca 387  Q
    |||||||||||||    |||||| ||| ||||||  |||| ||| | | |||||||| ||| ||||| ||||||||||||| ||||||||| | ||| ||    
T  39807033 gctccagtggcaagatgctccttacaaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctctacaca 39806934  T
Q  388 cgagccggattagtc 402  Q
    |||| ||||||||||    
T  39806933 cgagtcggattagtc 39806919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 431
Target Start/End: Original strand, 10669612 - 10669693
Alignment:
Q  350 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    ||||||||||| ||||||| ||||||||  | |||||||||| ||||||| |||   | |||||||| |||| |||||||||    
T  10669612 ggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaaccggtg 10669693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 23500844 - 23500795
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 323  Q
    |||||||||| ||| ||||| ||||||| || ||||||||||||||||||    
T  23500844 aaccaagttgtttgggctccggtggcaaggagctccttccaaagacgtat 23500795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 428
Target Start/End: Original strand, 26805306 - 26805394
Alignment:
Q  341 cgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccg 428  Q
    |||||| |||||||| | ||||||||||| ||| ||||| | |||||| ||| ||||||||||||  | ||||||||  ||||||||||    
T  26805306 cgattttcaggagaaacgacgtttggccagtgcacatgcctctacgcatgagtcggattagtcgcccacctttggtggctcgaaaaccg 26805394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 274 - 403
Target Start/End: Complemental strand, 9168414 - 9168286
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||||| |||| ||| | |||  ||||| ||||  |||||||| ||||||| ||||    
T  9168414 aaccaagttgcttgagctccagtggcaagga-ctccttccaaagacgtatccggggaataccgagaacgattcccagaggaacaacgcttggccagtgcg 9168316  T
Q  374 catgcatttacgcacgagccggattagtcg 403  Q
    ||| | | |||||| |||||||||||||||    
T  9168315 catacctctacgcatgagccggattagtcg 9168286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 401
Target Start/End: Complemental strand, 38897881 - 38897754
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| |||| ||| |||||||| || ||| || ||| |||||||  ||| ||| | | |||||||||||||| |||||||| ||||||| ||||    
T  38897881 aaccaagttgcttgaactcaagtggcaaggagctctttacaaggacgtatatggggaataccgggttcgatttccaggggaacaacgcttggccagtgcg 38897782  T
Q  374 catgcatttacgcacgagccggattagt 401  Q
    ||||| | ||||||||||||||||||||    
T  38897781 catgcctctacgcacgagccggattagt 38897754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 1538375 - 1538539
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||| | |||||||||||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  1538375 aaccaagttgtttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgc 1538474  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| ||||||||||| |||   | | |||||| |||| ||||||||| |||||    
T  1538475 gcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaag 1538539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 5732083 - 5731919
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| |||||| |||||||| ||||||| |||    
T  5732083 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 5731984  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||| | ||||| |||||||||   | |||| ||| |||| ||||||||| |||||    
T  5731983 gcatgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 5731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 273 - 403
Target Start/End: Original strand, 19572667 - 19572798
Alignment:
Q  273 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattg 371  Q
    ||||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | ||| |||| ||| || |||||||  ||||||| ||    
T  19572667 gaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtg 19572766  T
Q  372 cgcatgcatttacgcacgagccggattagtcg 403  Q
    ||||||| | |||||| |||||||||||||||    
T  19572767 cgcatgcctctacgcatgagccggattagtcg 19572798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 289 - 439
Target Start/End: Complemental strand, 25417331 - 25417180
Alignment:
Q  289 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgca 387  Q
    ||||||||||||| || |||||||||| |||||| ||||| ||| | | |||||||| ||||| | ||||||| ||||||| ||||||||| | |||| |    
T  25417331 gctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaa 25417232  T
Q  388 cgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    |||||||||||||||   || | |||||| |||  ||||||||| |||||||    
T  25417231 cgagccggattagtcatttaccattggtgggtcagaaaccggtgcgaaagaa 25417180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 37263185 - 37263314
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| ||||||||||||| ||  |||||| || ||||||  |||| |||   | ||||||||  |||| |||||||| ||||||| ||||    
T  37263185 aaccaagttgcttgggctccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgattctcaggggaacaacgcttggccaatgcg 37263284  T
Q  374 catgcatttacgcacgagccggattagtcg 403  Q
    ||||| | ||||||||||||||||||||||    
T  37263285 catgcctctacgcacgagccggattagtcg 37263314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 274 - 403
Target Start/End: Complemental strand, 41163622 - 41163493
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| ||||||||||||| || ||||||||||  |||||  |||| ||| | | |||||||| ||||| |||||||||||||||| |||     
T  41163622 aaccaagttgtttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcgattcccaggggaacaacgtttggccagtgca 41163523  T
Q  374 catgcatttacgcacgagccggattagtcg 403  Q
    ||||  | |||||| |||| ||||||||||    
T  41163522 catgtctctacgcatgagctggattagtcg 41163493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 9812816 - 9812980
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | ||||| ||||||| ||||||| ||     
T  9812816 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgt 9812915  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| || |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  9812916 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 9812980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 42086271 - 42086435
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||| ||||||| || |||||||||| ||||||  || | ||| | | |||||||| ||||| | ||||||| ||| ||| |||    
T  42086271 aaccaagttgcttgggctccggtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgc 42086370  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| ||||||||| |||||    
T  42086371 gcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 42086435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 307 - 437
Target Start/End: Original strand, 12081885 - 12082016
Alignment:
Q  307 tccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgca 405  Q
    |||||| || ||||||| |||| ||| ||| ||||||||  |||| | ||||||| ||||||| ||||||||||| ||||||||||||| ||||||||      
T  12081885 tccttcaaaggacgtatccggggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtc 12081984  T
Q  406 tatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
     | |||||||| |||| ||| |||||||||||    
T  12081985 cacctttggtgagtcggaaatcggtgtgaaag 12082016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 431
Target Start/End: Complemental strand, 3654075 - 3653919
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| ||||||||| |||||| ||| |||||| ||||||  |||  ||| | | |||||||| | || ||||||||| ||| ||| ||||    
T  3654075 aaccaagttgtttgggctccagtgacaatgagctctttccaaggacgtacccggagaataccgggttcgattcctag-agaacaacgcttgaccagtgcg 3653977  T
Q  374 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    ||||| | |||||||||| |||||||||||   | ||||||||  |||||||||||||    
T  3653976 catgcctctacgcacgaggcggattagtcgtccacctttggtggatcgaaaaccggtg 3653919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 5079275 - 5079438
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| | ||| ||||||| || ||||||||||  |||||| || | ||| | | | | |||||||||| | |||| || |||| || |||    
T  5079275 aaccaagttgtttgggttccggtggcaaagagctccttccaagcacgtatccgtggaataccggggttgatttccagggggaacagcgcttggtcaatgc 5079374  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||||||||||||||||||||  | |||||||| |||||||||||||| |||||    
T  5079375 gcatgcttctacgcacgagccggattagtcgcccacctttggtg-gtcgaaaaccggtgcgaaag 5079438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 12704958 - 12705122
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 372  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | |||| |||||||| ||| ||| ||     
T  12704958 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgt 12705057  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||| | |||||| || |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  12705058 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 12705122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 413
Target Start/End: Original strand, 26077085 - 26077225
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 372  Q
    |||||||||| ||| |||||||||| || || ||| |||||| |||||||| ||| ||| ||  |||||||| |||| | |||||||| ||||||| |||    
T  26077085 aaccaagttgtttgggctccagtggtaaggagctcattccaaggacgtatttggggaatactaggttcgattcccagagggaacaacgcttggccagtgc 26077184  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttg 413  Q
     ||||| | |||||||||||| ||||| ||||  |||||||    
T  26077185 acatgcctctacgcacgagccagattaatcgctcatctttg 26077225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 7866525 - 7866656
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  || | ||| | | |||||||| | ||||| ||||||| ||||||| ||     
T  7866525 aaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgt 7866624  T
Q  373 gcatgcatttacgcacgagccggattagtcgc 404  Q
    |||||| | ||||||||| |||||||||||||    
T  7866625 gcatgcctctacgcacgaaccggattagtcgc 7866656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 437
Target Start/End: Original strand, 40117400 - 40117523
Alignment:
Q  315 aagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttg 413  Q
    |||||||||||||| |||   || ||||||||||||| | ||||||| ||||||| ||||||||| | |||||| ||||||||||| |||   | |||||    
T  40117400 aagacgtattcggggaatatcgaattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttg 40117499  T
Q  414 gtgtgtcgaaaaccggtgtgaaag 437  Q
    |||  ||||||||||||| |||||    
T  40117500 gtggatcgaaaaccggtgcgaaag 40117523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 431
Target Start/End: Complemental strand, 6764539 - 6764462
Alignment:
Q  354 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    ||||| ||||||| | ||||||||| | ||||||||||||||||||||||| |||||||| || |||| |||| ||||    
T  6764539 aacaatgtttggctagtgcgcatgcctctacgcacgagccggattagtcgcctatctttgttgggtcggaaactggtg 6764462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 437
Target Start/End: Original strand, 8513462 - 8513627
Alignment:
Q  273 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattg 371  Q
    ||||||||||| |||  ||| |||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | ||| ||| ||| | ||||||| ||    
T  8513462 gaaccaagttgcttggactcaagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtg 8513561  T
Q  372 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    | ||||| | |||||||||||| |||||||||   | |||||||| |||| ||||||||| |||||    
T  8513562 cacatgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 8513627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 377
Target Start/End: Original strand, 16755005 - 16755109
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||  ||| ||| ||||||||| || ||| |||||||||||||| |||| ||| ||| ||||||||| |||||| ||||||  ||||||| |||    
T  16755005 aaccaagttccttgggcttcagtggcaaggagctctttccaaagacgtatccggggaatactgggttcgattttcaggagaaacaacacttggccagtgc 16755104  T
Q  373 gcatg 377  Q
    |||||    
T  16755105 gcatg 16755109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 28862779 - 28862823
Alignment:
Q  284 attgagctccagtggcaatgaactccttccaaagacgtattcggg 328  Q
    |||||||||||||||||| || |||||||||||||||||||||||    
T  28862779 attgagctccagtggcaaggagctccttccaaagacgtattcggg 28862823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 349
Target Start/End: Original strand, 18327730 - 18327789
Alignment:
Q  290 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca 349  Q
    |||||||||||| || |||||||||| ||||||||| |||||| ||| ||||||||||||    
T  18327730 ctccagtggcaaggagctccttccaaggacgtattcaggaaatactgggttcgatttcca 18327789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 20682781 - 20682654
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactcc-ttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattg 371  Q
    |||||||||| ||| ||||||||| ||| || |||| ||| || ||||||  |||| |||  || ||| |||||||||| | ||||||| ||||||| ||    
T  20682781 aaccaagttgcttgggctccagtgacaaggagctccattctaaggacgtacccggggaatattgggttagatttccagggggaacaacgcttggccagtg 20682682  T
Q  372 cgcatgcatttacgcacgagccggatta 399  Q
    ||||||| | ||||||||||||||||||    
T  20682681 cgcatgcctctacgcacgagccggatta 20682654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 431
Target Start/End: Complemental strand, 24463978 - 24463891
Alignment:
Q  344 tttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    |||| ||| |||||||| ||||||| ||||||||| | || ||||||||||||||||||||  | ||||  || ||||||||||||||    
T  24463978 tttcaaggcgaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccacctttactgggtcgaaaaccggtg 24463891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 439
Target Start/End: Complemental strand, 11845944 - 11845798
Alignment:
Q  294 agtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagc 392  Q
    |||||||| || |||||||||| ||||||  || |||||   | |||||||||| ||| | ||||||||||||||| ||||||||| | |||| | ||||    
T  11845944 agtggcaaggagctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacgtatgagc 11845845  T
Q  393 cggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    || |||| ||||  | ||||| || || | |||||||||||||||||    
T  11845844 cgaattaatcgcccacctttgatgggttggaaaccggtgtgaaagaa 11845798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 14588716 - 14588614
Alignment:
Q  338 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    ||||||||| |||||| || |||| ||| ||| ||||||||| | |||||| |||||||||||||||   | |||||||| | |||||||||||| ||||    
T  14588716 gttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgagccgaaaaccggtgcgaaa 14588617  T
Q  437 gaa 439  Q
    |||    
T  14588616 gaa 14588614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 18136443 - 18136317
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||||||||||| |||  ||| | | |||||||| ||| || |||||||  |||| || ||     
T  18136443 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtgt 18136344  T
Q  373 gcatgcatttacgcacgagccggatta 399  Q
    |||||| | ||| || |||||||||||    
T  18136343 gcatgcctctacacatgagccggatta 18136317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 20525782 - 20525912
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||| ||| || |||| |||| |||   | |||||||| |||||  |||||||  || |||| |||    
T  20525782 aaccaagttgcttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgc 20525881  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | |||||| |||||||||||||||    
T  20525882 gcatgcctctacgcatgagccggattagtcg 20525912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 395
Target Start/End: Original strand, 28857072 - 28857194
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||| |  |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  28857072 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 28857171  T
Q  373 gcatgcatttacgcacgagccgg 395  Q
    |||||| | |||||| |||||||    
T  28857172 gcatgcctctacgcatgagccgg 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 390
Target Start/End: Complemental strand, 35403675 - 35403558
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 372  Q
    |||||| ||| ||| ||||||||||||| || |||||||||| |||||| ||||||||| | | |||||||| |   || |||||||| ||||||| |||    
T  35403675 aaccaacttgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaaataccgggttcgattctaagggggaacaacgcttggccaatgc 35403576  T
Q  373 gcatgcatttacgcacga 390  Q
    |||||  | |||||||||    
T  35403575 gcatgtctctacgcacga 35403558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 9805028 - 9805112
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||| ||||||| ||||||||| | |||||| |||||||||||||||   | |||||||| |||| |||| |||| |||||    
T  9805028 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaag 9805112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 404
Target Start/End: Complemental strand, 35561986 - 35561850
Alignment:
Q  269 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggcc 367  Q
    |||| |||||||||| |||  |||||||||||| || |||||||||| ||||||| |||| |||   |||||||| |||||| | |||||||   || ||    
T  35561986 atattaaccaagttgcttggactccagtggcaaagagctccttccaatgacgtatccggggaatatcgagttcgacttccagagggaacaacacctgacc 35561887  T
Q  368 attgcgcatgcatttacgcacgagccggattagtcgc 404  Q
    | ||||||||| | ||| || ||||| ||||||||||    
T  35561886 agtgcgcatgcctctacacatgagccagattagtcgc 35561850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 41801001 - 41801085
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||| ||| ||| ||||||||  | ||||||||||||||||||||||   ||||||| || |||| ||| |||||||||||    
T  41801001 gaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtcgttcatctttgatgggtcggaaagcggtgtgaaag 41801085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 437
Target Start/End: Original strand, 2485141 - 2485304
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| |||  ||||| |||||| || ||| |||||| ||||||||| || ||| ||| |||||||| | ||| |||||||  | ||||  ||||    
T  2485141 aaccaagttgtttggactccaatggcaaggagctcattccaaggacgtattcagggaatactgggttcgattcctaggggaacaaccctgggcctgtgcg 2485240  T
Q  374 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||| | |||| | ||| ||||||||||||  | ||||| || |||| |||||| || |||||    
T  2485241 catgcctctacgtatgagtcggattagtcgctcacctttgatgggtcggaaaccgatgcgaaag 2485304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 436
Target Start/End: Original strand, 21487623 - 21487721
Alignment:
Q  336 gagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtga 434  Q
    ||||||||||| |||||| ||||||||||||| | ||||||||| | |   |||||||||||||||||||  | ||||  || |||||||||||||| ||    
T  21487623 gagttcgattttcaggaggaacaacgtttggctagtgcgcatgcctct---cacgagccggattagtcgcccacctttaatgggtcgaaaaccggtgcga 21487719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 416
Target Start/End: Original strand, 30995145 - 30995208
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtg 416  Q
    |||||||  |||||||  |||||||| | |||||||||||||||||||||||  ||||||||||    
T  30995145 gaacaacacttggccagggcgcatgcctctacgcacgagccggattagtcgctcatctttggtg 30995208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 328
Target Start/End: Original strand, 1826801 - 1826855
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcggg 328  Q
    |||||||||| ||| ||| |||| ||||||| ||||||||||||||||| |||||    
T  1826801 aaccaagttgtttgggcttcagtagcaatgagctccttccaaagacgtactcggg 1826855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 30349523 - 30349653
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| ||  ||||||||| ||||||| |||| ||| | | ||| |||||| | || |||||| | ||||||| |||    
T  30349523 aaccaagttgtttgggctccagtggcaaggagttccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgc 30349622  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | || ||| |||| | ||||||||    
T  30349623 gcatgcctctatgcatgagctgaattagtcg 30349653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 431
Target Start/End: Complemental strand, 39099862 - 39099784
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    |||||||  ||||||| ||| ||||| | |||||| ||||||||||||||||  | |||||||| |||| |||||||||    
T  39099862 gaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtg 39099784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 403
Target Start/End: Complemental strand, 42291588 - 42291538
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 403  Q
    |||||||| ||||||| ||| ||||| | ||||||||||||||||||||||    
T  42291588 gaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcg 42291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 427
Target Start/End: Complemental strand, 18294646 - 18294493
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| |||  || ||||| ||| ||||||||||||| ||| || ||||  ||| | | |||| || |||||| |||||||| |||| || ||||    
T  18294646 aaccaagttgtttggacttcagtgacaaggaactccttccaaggacatactcggagaataccgggttcaatatccaggggaacaacgcttggtcagtgcg 18294547  T
Q  374 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaacc 427  Q
    ||| | | ||| || || |||||||| ||||  |||||||||| |||| |||||    
T  18294546 catacctctacacatgaaccggattaatcgcccatctttggtgggtcggaaacc 18294493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 23383592 - 23383641
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 323  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||    
T  23383592 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtat 23383641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 24875366 - 24875415
Alignment:
Q  350 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggatta 399  Q
    ||||||||||||||| ||| ||||||||  | ||||||||||||||||||    
T  24875366 ggagaacaacgtttgaccagtgcgcatgtctctacgcacgagccggatta 24875415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 404
Target Start/End: Original strand, 25452939 - 25453000
Alignment:
Q  343 atttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 404  Q
    |||| |||| |||||| ||||| ||| || |||||| | |||||||||||||||||||||||    
T  25452939 attttcaggggaacaatgtttgaccagtgtgcatgcctctacgcacgagccggattagtcgc 25453000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 403
Target Start/End: Complemental strand, 35638167 - 35638066
Alignment:
Q  303 gaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagt 401  Q
    ||||||||||||  |||||||| ||| |||  ||| |||||||| |||||| |||||||||||| || || |||| | | |||||||||| | |||||||    
T  35638167 gaactccttccagggacgtatttggggaatattgaattcgattttcaggaggaacaacgtttggtcagtgtgcatacctctacgcacgagtcagattagt 35638068  T
Q  402 cg 403  Q
    ||    
T  35638067 cg 35638066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 6767214 - 6767166
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgta 322  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||    
T  6767214 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgta 6767166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 13664284 - 13664368
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||  ||||||| ||||||||| | |||||| ||||| ||||| |||   | ||||||||||||| ||||||||| |||||    
T  13664284 gaacaacacttggccagtgcgcatgcctctacgcatgagccagattaatcgatcacctttggtgtgtcggaaaccggtgcgaaag 13664368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 431
Target Start/End: Original strand, 68463 - 68618
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| ||| |||| |||||||| || |||||||||| ||||||  ||||||||   | |||||||| ||||| | ||||||| ||||    |||    
T  68463 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttggg---tgc 68559  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 431  Q
    |||||| | |||||||||||||||||||||||  | |||||||| ||||||||||||||    
T  68560 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtg 68618  T

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Target: scaffold0029 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 274 - 430
Target Start/End: Original strand, 40990 - 41147
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 372  Q
    |||||||||| ||| ||||||||||||| || |||||||||  |||||| || || |||   | |||||||| || ||| |||||||  |||| || ||     
T  40990 aaccaagttgtttgggctccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgattctcaaggggaacaacacttggtcagtgt 41089  T
Q  373 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 430  Q
    |||||| | |||||||||||||||||||||||  |||||||||| |||| ||||||||    
T  41090 gcatgcctctacgcacgagccggattagtcgcccatctttggtgagtcggaaaccggt 41147  T

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Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 404
Target Start/End: Complemental strand, 95136 - 95013
Alignment:
Q  280 gttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgca 379  Q
    |||| ||| |||||| |||||| || ||||||||||  | |||| |||| ||| |   |||||||||| |||| ||||||||||| ||| |||||||||     
T  95136 gttgcttgggctccaatggcaaggagctccttccaagaaagtatccggggaataccaggttcgatttctagga-aacaacgtttgaccagtgcgcatgcc 95038  T
Q  380 tttacgcacgagccggattagtcgc 404  Q
    |||||||| ||||||||||||||||    
T  95037 tttacgcatgagccggattagtcgc 95013  T

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Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 436
Target Start/End: Original strand, 186467 - 186626
Alignment:
Q  277 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcat 376  Q
    ||||||| |||||||| |||||||| || | ||||| || || ||||| ||  |||   | ||||||||||  |||||| || |||||| || ||| |||    
T  186467 caagttggttgagctctagtggcaaggagcaccttctaaggatgtatttggagaatatcgggttcgatttcagggagaataatgtttggtcagtgcacat 186566  T
Q  377 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    || | ||||||||||||||||||||||   |||||| ||| |||| ||||||||||||||    
T  186567 gcctctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccggtgtgaaa 186626  T

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Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 224372 - 224427
Alignment:
Q  382 tacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||||||||||||||||||   |||||||||| |||| ||||||||| |||||    
T  224372 tacgcacgagccggattagtcgtccatctttggtgggtcggaaaccggtgcgaaag 224427  T

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Target: scaffold0209 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 12521 - 12650
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| |||| |||||||| || || ||||||| |||||| ||| ||||| | | |||||||| | ||| |||||||| ||| ||| ||||    
T  12521 aaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattcctagg-gaacaacgcttgaccagtgcg 12619  T
Q  374 catgcatttacgcacgagccggattagtcgc 404  Q
    ||||| | |||||| ||| ||||||||||||    
T  12620 catgcctctacgcatgagtcggattagtcgc 12650  T

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Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 26129 - 26259
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 372  Q
    |||||||||| |||  ||| ||||||||  ||||||||| || ||| ||   ||| ||| ||| |||||||||||||| | ||||||| ||||||| ||     
T  26129 aaccaagttgcttggactctagtggcaagaaactccttctaaggacatacctggggaatactgggttcgatttccagggggaacaacgcttggccagtgt 26228  T
Q  373 gcatgcatttacgcacgagccggattagtcg 403  Q
    |||||| | ||||||||||||||||||||||    
T  26229 gcatgcctctacgcacgagccggattagtcg 26259  T

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Target: scaffold0170 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 403
Target Start/End: Original strand, 9856 - 9921
Alignment:
Q  339 ttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 403  Q
    ||||||||||||| | ||||||| ||||||| ||||||||| | ||||||||||||||||||||||    
T  9856 ttcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcg 9921  T

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Target: scaffold0316 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 1713 - 1613
Alignment:
Q  338 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 436  Q
    |||||||||||||| | ||||||| || |||| ||||||||| | |||||| |||||  |||||||||  | |||||||| |||||||||||||| ||||    
T  1713 gttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgggtcgaaaaccggtgcgaaa 1614  T
Q  437 g 437  Q
    |    
T  1613 g 1613  T

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Target: scaffold0291 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 6881 - 6965
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||  ||||||| ||||||||| | |||||| ||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  6881 gaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 6965  T

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Target: scaffold0010 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 437
Target Start/End: Complemental strand, 155794 - 155710
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||| ||||| | ||||||||| | |||||||||||||||||||||||  | |||||||| |||| || |||||| |||||    
T  155794 gaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaag 155710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 377
Target Start/End: Complemental strand, 25947 - 25843
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgc 372  Q
    |||||||||| ||| |||||||| |||| || ||||||||||  ||||| ||||| ||| |   |||||||| | ||| ||||||||| ||||||| |||    
T  25947 aaccaagttgtttgggctccagtagcaaagagctccttccaagtacgtactcggggaatacaaggttcgattcctagggagaacaacgcttggccagtgc 25848  T
Q  373 gcatg 377  Q
    |||||    
T  25847 gcatg 25843  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 250101 - 250022
Alignment:
Q  360 gtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 439  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||    |||||||| |||| ||| ||||| |||||||    
T  250101 gtttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaagaa 250022  T

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Target: scaffold0384 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 5919 - 6048
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 373  Q
    |||||||||| ||| | || |||||||| || |||||| ||| | ||||  |||| ||| ||| |||||||||||||| | |||||| ||||||| |||     
T  5919 aaccaagttgcttgggttctagtggcaaggagctcctttcaagggcgtacccggggaatactgggttcgatttccagggggacaacgcttggccagtgca 6018  T
Q  374 catgcatttacgcacgagccggattagtcg 403  Q
    ||||| | |||||| ||| || ||||||||    
T  6019 catgcctctacgcatgagacgaattagtcg 6048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 289 - 437
Target Start/End: Original strand, 319383 - 319532
Alignment:
Q  289 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgca 387  Q
    ||||||||||||| || |||||||||| ||||||| |||| ||| | | ||| |||||| | || |||||||| ||||||| ||||||| | | || |||    
T  319383 gctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgca 319482  T
Q  388 cgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
     |||| ||||||||||   | |||||||| | || ||||||||| |||||    
T  319483 tgagctggattagtcgtccacctttggtggggcggaaaccggtgcgaaag 319532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 437
Target Start/End: Complemental strand, 42918 - 42831
Alignment:
Q  350 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    ||||||||| | |||| || ||||||||| | ||| || ||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  42918 ggagaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 42831  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 8873 - 8824
Alignment:
Q  274 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 323  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||    
T  8873 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtat 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 12696 - 12780
Alignment:
Q  353 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 437  Q
    |||||||| ||||||| || |||||| | ||||||||| |||||||||||||  | ||||| || |||  ||||||||| |||||    
T  12696 gaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgcccacctttgatgggtcagaaaccggtgcgaaag 12780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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