View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1320_low_52 (Length: 315)

Name: NF1320_low_52
Description: NF1320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1320_low_52
NF1320_low_52
[»] chr2 (13 HSPs)
chr2 (155-312)||(12645987-12646144)
chr2 (144-268)||(28253160-28253284)
chr2 (181-268)||(14440221-14440308)
chr2 (225-268)||(1380603-1380646)
chr2 (155-268)||(33515783-33515896)
chr2 (272-312)||(33515724-33515764)
chr2 (229-268)||(9668582-9668621)
chr2 (233-268)||(11028399-11028434)
chr2 (209-268)||(11234055-11234114)
chr2 (209-268)||(22725015-22725074)
chr2 (229-268)||(37445618-37445657)
chr2 (222-268)||(33583927-33583973)
chr2 (229-269)||(25380962-25381002)
[»] chr5 (22 HSPs)
chr5 (156-306)||(27165488-27165638)
chr5 (155-303)||(25856965-25857113)
chr5 (148-268)||(28535251-28535371)
chr5 (148-268)||(42928575-42928695)
chr5 (148-268)||(31641955-31642075)
chr5 (155-268)||(23238834-23238947)
chr5 (155-268)||(30731890-30732003)
chr5 (155-268)||(27116749-27116862)
chr5 (155-268)||(42514171-42514284)
chr5 (148-268)||(35983367-35983487)
chr5 (155-268)||(8299758-8299871)
chr5 (155-268)||(12825650-12825763)
chr5 (181-268)||(33170135-33170222)
chr5 (155-268)||(27795934-27796048)
chr5 (209-261)||(19513048-19513100)
chr5 (229-269)||(7000355-7000395)
chr5 (209-267)||(21077562-21077620)
chr5 (222-268)||(34338402-34338448)
chr5 (209-262)||(26263013-26263066)
chr5 (229-261)||(30509630-30509662)
chr5 (229-261)||(30549970-30550002)
chr5 (272-312)||(33170241-33170281)
[»] chr1 (6 HSPs)
chr1 (155-303)||(35541500-35541648)
chr1 (144-268)||(47622653-47622777)
chr1 (155-268)||(6051054-6051167)
chr1 (229-268)||(20796193-20796232)
chr1 (229-268)||(39430802-39430841)
chr1 (229-268)||(49264540-49264579)
[»] chr8 (20 HSPs)
chr8 (181-303)||(43270929-43271051)
chr8 (148-268)||(9923045-9923165)
chr8 (155-268)||(13879063-13879176)
chr8 (155-268)||(25090838-25090951)
chr8 (155-268)||(41664944-41665057)
chr8 (155-268)||(8300254-8300367)
chr8 (155-268)||(20824750-20824863)
chr8 (155-303)||(32267013-32267168)
chr8 (181-268)||(172615-172702)
chr8 (155-268)||(17699931-17700044)
chr8 (209-268)||(7924891-7924950)
chr8 (209-268)||(36157659-36157718)
chr8 (210-268)||(43283249-43283307)
chr8 (208-261)||(11393931-11393984)
chr8 (191-268)||(42177128-42177205)
chr8 (209-261)||(24794262-24794314)
chr8 (229-268)||(17659356-17659395)
chr8 (225-268)||(38046879-38046922)
chr8 (222-268)||(37165697-37165743)
chr8 (231-267)||(43249370-43249406)
[»] chr4 (29 HSPs)
chr4 (148-290)||(19735289-19735431)
chr4 (155-268)||(19755718-19755831)
chr4 (155-268)||(19783975-19784088)
chr4 (155-268)||(48312545-48312658)
chr4 (157-268)||(5789668-5789779)
chr4 (155-265)||(1828119-1828229)
chr4 (155-268)||(54482735-54482848)
chr4 (155-268)||(55725282-55725395)
chr4 (155-268)||(23642167-23642280)
chr4 (155-268)||(23647825-23647938)
chr4 (155-268)||(47419255-47419368)
chr4 (157-268)||(11586774-11586885)
chr4 (225-268)||(42778759-42778802)
chr4 (155-260)||(2821618-2821723)
chr4 (209-261)||(42953077-42953129)
chr4 (229-268)||(8935599-8935638)
chr4 (225-265)||(15740741-15740781)
chr4 (229-269)||(19648234-19648274)
chr4 (204-268)||(46146177-46146241)
chr4 (229-269)||(53486511-53486551)
chr4 (229-268)||(10562909-10562948)
chr4 (229-268)||(23657822-23657861)
chr4 (229-268)||(49925843-49925882)
chr4 (222-268)||(36183055-36183101)
chr4 (235-268)||(4524202-4524235)
chr4 (229-262)||(20396107-20396140)
chr4 (272-312)||(46146260-46146300)
chr4 (272-312)||(48312677-48312717)
chr4 (229-269)||(53780570-53780610)
[»] chr7 (16 HSPs)
chr7 (155-268)||(235014-235127)
chr7 (148-268)||(17721079-17721199)
chr7 (156-268)||(31423054-31423166)
chr7 (155-268)||(11276824-11276937)
chr7 (148-260)||(47877427-47877539)
chr7 (155-268)||(4937704-4937817)
chr7 (217-268)||(39931172-39931223)
chr7 (155-268)||(29968425-29968538)
chr7 (229-269)||(34232224-34232264)
chr7 (218-268)||(36364030-36364080)
chr7 (155-268)||(37255209-37255322)
chr7 (235-292)||(41805295-41805352)
chr7 (229-269)||(4077800-4077840)
chr7 (222-268)||(23887602-23887648)
chr7 (222-268)||(23898778-23898824)
chr7 (259-303)||(39931122-39931166)
[»] chr3 (22 HSPs)
chr3 (155-268)||(16179398-16179511)
chr3 (155-268)||(34332391-34332504)
chr3 (149-233)||(17097488-17097572)
chr3 (162-306)||(15313040-15313192)
chr3 (238-312)||(17077815-17077889)
chr3 (155-268)||(2364728-2364841)
chr3 (155-268)||(19919805-19919918)
chr3 (155-268)||(48569615-48569728)
chr3 (155-268)||(10323147-10323260)
chr3 (155-268)||(12341831-12341944)
chr3 (155-268)||(19891128-19891241)
chr3 (204-268)||(962739-962803)
chr3 (209-261)||(14864048-14864100)
chr3 (229-268)||(21740099-21740138)
chr3 (229-268)||(43121243-43121282)
chr3 (260-312)||(962680-962732)
chr3 (204-268)||(3141351-3141415)
chr3 (272-312)||(48569556-48569596)
chr3 (217-264)||(20531631-20531678)
chr3 (272-312)||(3141434-3141474)
chr3 (229-269)||(23819096-23819136)
chr3 (229-261)||(50544749-50544781)
[»] chr6 (24 HSPs)
chr6 (155-303)||(21629648-21629796)
chr6 (148-268)||(24767005-24767125)
chr6 (155-268)||(10576826-10576939)
chr6 (155-268)||(17605910-17606023)
chr6 (144-268)||(14372567-14372691)
chr6 (209-304)||(15956516-15956608)
chr6 (155-268)||(2554057-2554170)
chr6 (217-266)||(10922066-10922115)
chr6 (181-260)||(20882617-20882696)
chr6 (225-268)||(18682150-18682193)
chr6 (212-269)||(649641-649698)
chr6 (204-268)||(13938219-13938283)
chr6 (229-268)||(503108-503147)
chr6 (229-268)||(8264748-8264787)
chr6 (229-268)||(11060438-11060477)
chr6 (229-268)||(17078766-17078805)
chr6 (229-268)||(18051025-18051064)
chr6 (209-261)||(10362638-10362690)
chr6 (229-268)||(5085602-5085641)
chr6 (209-268)||(13086044-13086103)
chr6 (222-268)||(26514242-26514288)
chr6 (215-261)||(33805291-33805337)
chr6 (227-268)||(17577294-17577335)
chr6 (229-269)||(17873394-17873434)
[»] scaffold1350 (2 HSPs)
scaffold1350 (164-268)||(4-108)
scaffold1350 (272-312)||(127-167)
[»] scaffold0472 (1 HSPs)
scaffold0472 (155-268)||(3703-3816)
[»] scaffold0034 (1 HSPs)
scaffold0034 (155-268)||(105419-105532)
[»] scaffold0912 (1 HSPs)
scaffold0912 (229-268)||(2449-2488)
[»] scaffold0179 (2 HSPs)
scaffold0179 (229-268)||(8057-8096)
scaffold0179 (229-268)||(12991-13030)
[»] scaffold0007 (1 HSPs)
scaffold0007 (229-262)||(182640-182673)


Alignment Details
Target: chr2 (Bit Score: 74; Significance: 6e-34; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 155 - 312
Target Start/End: Original strand, 12645987 - 12646144
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  ||  ||||||  |||||| ||||||| |||| ||||||| ||| ||  ||||||||||||||||||||||||||||||    
T  12645987 cccaccctcctcctaacacaatccgcaaaccaatcctccccaccctcgcctatcccatctctaatcctgactatctccctccaccaagaagaacaactcc 12646086  T
Q  255 ggcccccatcctcccctccatacctagccaccaacaccttactccacaacccatctct 312  Q
    |||||||||||||| | || |||||||||||||||||| ||  |||||| ||||||||    
T  12646087 ggcccccatcctccacaccttacctagccaccaacaccctataccacaatccatctct 12646144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 28253160 - 28253284
Alignment:
Q  144 cggaaccgtcacccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaaga 243  Q
    ||||||| || |||||||| |||||||||||  ||  |||||| ||||||| ||||||| |||| ||||||| ||| ||| |||||||||||||||||||    
T  28253160 cggaaccatcccccaccctcctcctaacacaaaccgaaaaccaaccctccccaccctcgtctatcccatctctaatcctcactatctccctccaccaaga 28253259  T
Q  244 agaacaactccggcccccatcctcc 268  Q
    |||||||||||||||||||||||||    
T  28253260 agaacaactccggcccccatcctcc 28253284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 14440221 - 14440308
Alignment:
Q  181 aaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||||| ||||||| ||||||| |||| ||||||| ||| || ||||||||||||||||| |||||||||||||||||||||||||||    
T  14440221 aaaccagccctccccaccctcgcctatcccatctctaatcctagctatctccctccaccacgaagaacaactccggcccccatcctcc 14440308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 1380603 - 1380646
Alignment:
Q  225 ctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  1380603 ctatctccctccaccaagaagaacaactccggcccccaacctcc 1380646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 33515896 - 33515783
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  || ||||||| ||||||| ||||||   ||| || |||  |||  |  |||||||||||||||| |||||||| ||||    
T  33515896 cccaccctcctcctaacacaatccgtaaaccaaccctccccaccctcacatatcccgtctttaatcttgactatctccctccaccacgaagaacagctcc 33515797  T
Q  255 ggcccccatcctcc 268  Q
    | ||||||||||||    
T  33515796 gacccccatcctcc 33515783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 33515764 - 33515724
Alignment:
Q  272 ccatacctagccaccaacaccttactccacaacccatctct 312  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  33515764 ccatacctagccaccaacaccctacgccacaacccatctct 33515724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 9668621 - 9668582
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  9668621 ctccctccaccaataagaacaactccggcccccaacctcc 9668582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 268
Target Start/End: Original strand, 11028399 - 11028434
Alignment:
Q  233 ctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||||||||||| ||||||||||||||    
T  11028399 ctccaccaagaagaacaactctggcccccatcctcc 11028434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 11234114 - 11234055
Alignment:
Q  209 ccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||| ||| ||| ||| |||||| |||||| |||||||||||||||||||| |||||    
T  11234114 ccatctctaatcctccctacctcccttcaccaataagaacaactccggcccccaacctcc 11234055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 22725074 - 22725015
Alignment:
Q  209 ccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||| ||| | | || || |||||| |||||||||||||||||||||||||||    
T  22725074 ccatctcaaatcctcacaaccttccgccaccacgaagaacaactccggcccccatcctcc 22725015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 37445618 - 37445657
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  37445618 ctcccaccaccacgaagaacaactccggcccccatcctcc 37445657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 33583973 - 33583927
Alignment:
Q  222 tcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||||||||||||||||  |||||| |||||| |||||    
T  33583973 tcgctatctccctccaccaagaagaaacactccgacccccaacctcc 33583927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 25381002 - 25380962
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctccc 269  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  25381002 ctccctccaccacgaagaacaactctggcccccaacctccc 25380962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 4e-32; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 27165638 - 27165488
Alignment:
Q  156 ccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactccg 255  Q
    ||||||| ||||| ||||||  |  |||| ||||||||| ||||||| |||| ||||||| ||| |||  ||||||||||||||||||||||||||| ||    
T  27165638 ccaccctcctcctgacacacagcgcaaacaacccctccccaccctcgcctatcccatctctaatcctcattatctccctccaccaagaagaacaacttcg 27165539  T
Q  256 gcccccatcctcccctccatacctagccaccaacaccttactccacaaccc 306  Q
    ||||||||||||| |  |||||||||||||||||||||||| | |||||||    
T  27165538 gcccccatcctccacaacatacctagccaccaacaccttacgcaacaaccc 27165488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 303
Target Start/End: Complemental strand, 25857113 - 25856965
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  |   |||||| ||||||| ||||||  |||| ||||||| ||| ||| | ||||||||||||||  ||||||||||||    
T  25857113 cccaccctcctcctaacacaacctgaaaaccatccctccccaccctcacctatcccatctctaatcctcacaatctccctccaccacaaagaacaactcc 25857014  T
Q  255 ggcccccatcctcccctccatacctagccaccaacaccttactccacaa 303  Q
    |||||||||||||| | ||||||||||||| ||||||| ||||||||||    
T  25857013 ggcccccatcctccacgccatacctagccaacaacaccctactccacaa 25856965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 148 - 268
Target Start/End: Complemental strand, 28535371 - 28535251
Alignment:
Q  148 accgtcacccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaa 247  Q
    |||||| |||||||| ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| |||||||||||||||| ||||||    
T  28535371 accgtctcccaccctcctcctaacacaagacccaaaccaaccctctccaccctcacctatcccatctctaatcctcactatctccctccaccatgaagaa 28535272  T
Q  248 caactccggcccccatcctcc 268  Q
    |||||||||||||||||||||    
T  28535271 caactccggcccccatcctcc 28535251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 148 - 268
Target Start/End: Original strand, 42928575 - 42928695
Alignment:
Q  148 accgtcacccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaa 247  Q
    ||||||||||||||| ||||||| |||||||  |||||| ||||| | ||||||  |||| ||||||| ||  ||| |||||| ||||||||| ||||||    
T  42928575 accgtcacccaccctcctcctaaaacacgccccaaaccagccctctccaccctcacctatcccatctctaaccctcactatctgcctccaccacgaagaa 42928674  T
Q  248 caactccggcccccatcctcc 268  Q
    |||||||||||||||||||||    
T  42928675 caactccggcccccatcctcc 42928695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 268
Target Start/End: Original strand, 31641955 - 31642075
Alignment:
Q  148 accgtcacccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaa 247  Q
    |||||| |||||||| ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| ||||||||| |||||| ||||||    
T  31641955 accgtctcccaccctcctcctaacacaagacccaaaccaaccctctccaccctcacctatcccatctctaatcctcactatctcccgccaccatgaagaa 31642054  T
Q  248 caactccggcccccatcctcc 268  Q
    |||||||||||||||||||||    
T  31642055 caactccggcccccatcctcc 31642075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 23238834 - 23238947
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| ||||||||||| | |  |||||||||||| | ||||||  |||| ||||||| ||| ||| |||||||||||||||| || ||||||||||    
T  23238834 cccaccctcctcctaacacaagacccaaaccacccctctccaccctcacctatcccatctctaatcctcactatctccctccaccacgacgaacaactcc 23238933  T
Q  255 ggcccccatcctcc 268  Q
    |||||||| |||||    
T  23238934 ggcccccaacctcc 23238947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 30732003 - 30731890
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| | |||||||||||||| |||||||||||||    
T  30732003 cccaccctcctcctaacacatgtcccaaaccaaccctctccaccctcacctatcccatctctaatcctcacaatctccctccaccatgaagaacaactcc 30731904  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  30731903 ggcccccatcctcc 30731890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 27116862 - 27116749
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| ||||||||||| | |  |||||| ||| | | ||||||  |||| ||||||| ||| ||| | |||||||||||||| |||||||||||||    
T  27116862 cccaccctcctcctaacacaagacccaaaccatccccctccaccctcacctatcccatctctaatcctcacgatctccctccaccacgaagaacaactcc 27116763  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  27116762 ggcccccatcctcc 27116749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 42514171 - 42514284
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    ||||| || ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| | |||||||||||||| |||||||||||||    
T  42514171 cccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatctctaatcctcacaatctccctccaccacgaagaacaactcc 42514270  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  42514271 ggcccccatcctcc 42514284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 268
Target Start/End: Complemental strand, 35983487 - 35983367
Alignment:
Q  148 accgtcacccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaa 247  Q
    |||||| |||||||| ||||||||||| |    |||||| ||||| | ||| ||  |||| ||||||| ||| ||| | |||||||||||||| ||||||    
T  35983487 accgtctcccaccctcctcctaacacaagatccaaaccaaccctctccaccgtcacctatcccatctctaatcctcacaatctccctccaccacgaagaa 35983388  T
Q  248 caactccggcccccatcctcc 268  Q
    |||||||||||||||||||||    
T  35983387 caactccggcccccatcctcc 35983367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 8299871 - 8299758
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  |   |||||| ||||||| ||||||  |||| ||||||  ||| ||| | ||||||||||||||  ||||||||||||    
T  8299871 cccaccctcctcctaacacaacctgaaaaccatccctccccaccctcacctatcccatctttaatcctcacaatctccctccaccacaaagaacaactcc 8299772  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  8299771 ggcccccatcctcc 8299758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 12825650 - 12825763
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| | |||||||||||||| ||||||||||||     
T  12825650 cccaccctcctcctaacacatgtcccaaaccaaccctctccaccctcacctatcccatctctaatcctcacaatctccctccaccacgaagaacaactct 12825749  T
Q  255 ggcccccatcctcc 268  Q
    | ||||||||||||    
T  12825750 gacccccatcctcc 12825763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 33170135 - 33170222
Alignment:
Q  181 aaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||||| ||||| || |||||  |||| ||||| | ||| ||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  33170135 aaaccaaccctctcatccctcttctatcccatccctaatcctcactatctcccgccaccaagatgaacaactccggcccccatcctcc 33170222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 27795934 - 27796048
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcg-gctattccatctcaaattctcgctatctccctccaccaagaagaacaactc 253  Q
    |||||||| |||||||||||  ||| |||||| ||||| | ||||||| ||||| ||||||| |||  |  ||  |||||||||||| ||||||||||||    
T  27795934 cccaccctcctcctaacacaatccacaaaccaaccctctccaccctcgcgctatcccatctctaatcttgacttactccctccaccacgaagaacaactc 27796033  T
Q  254 cggcccccatcctcc 268  Q
     ||||||||||||||    
T  27796034 tggcccccatcctcc 27796048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 19513100 - 19513048
Alignment:
Q  209 ccatctcaaattctcgctatctccctccaccaagaagaacaactccggccccc 261  Q
    ||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||    
T  19513100 ccatctcgaatcctccctacctccctccaccaagaagaacaactccggccccc 19513048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 7000395 - 7000355
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctccc 269  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  7000395 ctccctccaccaagaagaacaactctggcccccaacctccc 7000355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 21077562 - 21077620
Alignment:
Q  209 ccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctc 267  Q
    ||||||| |||| | |||||||| | |||||||||||||| ||||||||||||| ||||    
T  21077562 ccatctctaattttagctatctctcgccaccaagaagaaccactccggcccccaacctc 21077620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 34338402 - 34338448
Alignment:
Q  222 tcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||||||| |||||||||||||||||  ||||||||||||| |||||    
T  34338402 tcgctatccccctccaccaagaagaaacactccggcccccaacctcc 34338448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 26263066 - 26263013
Alignment:
Q  209 ccatctcaaattctcgctatctccctccaccaagaagaacaactccggccccca 262  Q
    ||||| |||||| |||||| ||||||||||||| |||| | |||||||||||||    
T  26263066 ccatcacaaattttcgctacctccctccaccaaaaagacccactccggccccca 26263013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 261
Target Start/End: Complemental strand, 30509662 - 30509630
Alignment:
Q  229 ctccctccaccaagaagaacaactccggccccc 261  Q
    ||||| |||||||||||||||||||||||||||    
T  30509662 ctcccgccaccaagaagaacaactccggccccc 30509630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 261
Target Start/End: Complemental strand, 30550002 - 30549970
Alignment:
Q  229 ctccctccaccaagaagaacaactccggccccc 261  Q
    ||||| |||||||||||||||||||||||||||    
T  30550002 ctcccgccaccaagaagaacaactccggccccc 30549970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 33170241 - 33170281
Alignment:
Q  272 ccatacctagccaccaacaccttactccacaacccatctct 312  Q
    |||||||||||||| |||||| ||| |||||||||||||||    
T  33170241 ccatacctagccactaacaccctacgccacaacccatctct 33170281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 303
Target Start/End: Original strand, 35541500 - 35541648
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    ||||| || ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| | |||||||||||||| |||||||||||||    
T  35541500 cccactctcctcctaacacaagacccaaaccatccctcgccaccctcacctatcccatctctaatcctcacgatctccctccaccacgaagaacaactcc 35541599  T
Q  255 ggcccccatcctcccctccatacctagccaccaacaccttactccacaa 303  Q
    |||||||||||||| | |||||||||||||| |||||||| ||||||||    
T  35541600 ggcccccatcctccacaccatacctagccactaacacctttctccacaa 35541648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 47622777 - 47622653
Alignment:
Q  144 cggaaccgtcacccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaaga 243  Q
    ||||||| || |||||||| |||||||||||  ||  |||||| ||||||| | |||||  ||| ||||||| ||| ||| ||||||| |||||||||||    
T  47622777 cggaaccatcccccaccctcctcctaacacaatccgaaaaccaaccctccccatcctcgtttatcccatctctaatcctcactatctctctccaccaaga 47622678  T
Q  244 agaacaactccggcccccatcctcc 268  Q
    ||||||||||||||||| |||||||    
T  47622677 agaacaactccggcccctatcctcc 47622653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 6051054 - 6051167
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    ||||| || ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| | |||||||||||||| |||||||||||||    
T  6051054 cccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatctctaatcctcacaatctccctccaccacgaagaacaactcc 6051153  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  6051154 ggcccccatcctcc 6051167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 20796193 - 20796232
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  20796193 ctccctccaccaataagaacaactccggcccccaacctcc 20796232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 39430802 - 39430841
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  39430802 ctccctccaccaataagaacaactccggcccccaacctcc 39430841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 49264579 - 49264540
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  49264579 ctccctccaccaataagaacaactccggcccccaacctcc 49264540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 303
Target Start/End: Original strand, 43270929 - 43271051
Alignment:
Q  181 aaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcccctccataccta 280  Q
    |||||| ||||||| ||||||| |||| ||||||| ||| ||  |||||||||||||||| |||||||||||||||||||||||| || | |||||||||    
T  43270929 aaaccagccctccccaccctcgcctatcccatctctaatcctaactatctccctccaccacgaagaacaactccggcccccatccgccacaccataccta 43271028  T
Q  281 gccaccaacaccttactccacaa 303  Q
    |||| ||||||| ||| ||||||    
T  43271029 gccatcaacaccctacaccacaa 43271051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 148 - 268
Target Start/End: Original strand, 9923045 - 9923165
Alignment:
Q  148 accgtcacccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaa 247  Q
    |||||| |||||||| ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| |||||||||||||||| ||||||    
T  9923045 accgtctcccaccctcctcctaacacaagacccaaaccaaccctctccaccctcacctatcccatctctaatcctcactatctccctccaccatgaagaa 9923144  T
Q  248 caactccggcccccatcctcc 268  Q
    |||||||||||||||||||||    
T  9923145 caactccggcccccatcctcc 9923165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 13879176 - 13879063
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  ||| |||||| ||||| | ||||||| |||| ||||||| |||  |  |||||||||||||||| ||||||||||||     
T  13879176 cccaccctcctcctaacacaatccacaaaccaaccctctccaccctcgcctatcccatctctaatcttgactatctccctccaccacgaagaacaactct 13879077  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  13879076 ggcccccatcctcc 13879063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 25090838 - 25090951
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  || ||||||| ||||  | ||||||| |||| ||||||| ||| ||  |||||||||||||||| |||||||| ||||    
T  25090838 cccaccctcctcctaacacaatccgtaaaccaaccctttccaccctcgcctatcccatctctaatcctgactatctccctccaccacgaagaacagctcc 25090937  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  25090938 ggcccccatcctcc 25090951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 41665057 - 41664944
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| ||||||||||||| |  |||||| ||||| | ||||||   ||| ||||||| ||| ||| |||||||| ||||||| |||||||||||||    
T  41665057 cccaccctcctcctaacacacgtcccaaaccaaccctctccaccctcacatatcccatctctaatcctcactatctccatccaccacgaagaacaactcc 41664958  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  41664957 ggcccccatcctcc 41664944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 8300254 - 8300367
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    ||||| || ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| | |||||||||||||| |||||||||||||    
T  8300254 cccactctcctcctaacacaagacccaaaccatccctcgccaccctcacctatcccatctctaatcctcacgatctccctccaccacgaagaacaactcc 8300353  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  8300354 ggcccccatcctcc 8300367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 20824750 - 20824863
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  |   |||||| ||||||| ||||||  |||| ||||||| ||| ||| | ||||||||||||||  ||||||||||||    
T  20824750 cccaccctcctcctaacacaacctgaaaaccagccctccccaccctcacctatcccatctctaatcctcacaatctccctccaccacaaagaacaactcc 20824849  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  20824850 ggcccccatcctcc 20824863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 303
Target Start/End: Original strand, 32267013 - 32267168
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||| | ||||||||||| | |  |||||||||||| | ||||||  |||| ||||||| ||| ||  |||||||||||||||| || ||||||||||    
T  32267013 cccaccttcctcctaacacaagacccaaaccacccctctccaccctcacctatcccatctctaatccttactatctccctccaccacgacgaacaactcc 32267112  T
Q  255 ggcccccatcctcc---cctccat----acctagccaccaacaccttactccacaa 303  Q
    |||||||| |||||   |||||||    |||||||||| |||||||| ||||||||    
T  32267113 ggcccccaacctccaaacctccatccgcacctagccactaacacctttctccacaa 32267168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 268
Target Start/End: Complemental strand, 172702 - 172615
Alignment:
Q  181 aaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||||| ||||| | ||||||  |||| ||||||| ||| ||| | |||||||||||||| |||||||||||||||||||||||||||    
T  172702 aaaccatccctctccaccctcacctatcccatctctaatcctcacgatctccctccaccacgaagaacaactccggcccccatcctcc 172615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 17699931 - 17700044
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  |   |||||| ||||||| ||||||  |||| ||||||| ||| ||  |||||||||||||||  ||||| |||||||    
T  17699931 cccaccctcctcctaacacaacctgcaaaccagccctccccaccctcacctatcccatctctaatcctaactatctccctccaccgcgaagagcaactcc 17700030  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  17700031 ggcccccatcctcc 17700044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 7924891 - 7924950
Alignment:
Q  209 ccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||| ||| ||| | |||||||||||||| |||||||||||||||||||||||||||    
T  7924891 ccatctctaatcctcacaatctccctccaccacgaagaacaactccggcccccatcctcc 7924950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 36157659 - 36157718
Alignment:
Q  209 ccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||| ||| ||||| | |||||||||||||||||||||||||||||||||| |||||    
T  36157659 ccatctctaatcctcgccacctccctccaccaagaagaacaactccggcccccaacctcc 36157718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 43283307 - 43283249
Alignment:
Q  210 catctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||| ||||||||| ||||||||||||||||| |||||||||||||||  |||||||||    
T  43283307 catcccaaattctcactatctccctccaccaacaagaacaactccggcttccatcctcc 43283249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 11393984 - 11393931
Alignment:
Q  208 tccatctcaaattctcgctatctccctccaccaagaagaacaactccggccccc 261  Q
    |||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||    
T  11393984 tccatctcgaatcctccctacctccctccaccaagaagaacaactccggccccc 11393931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 268
Target Start/End: Complemental strand, 42177205 - 42177128
Alignment:
Q  191 tcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||| ||||||| |||| ||||||| ||| ||  |||||||||||||||| ||||||||||| |||||| ||||||||    
T  42177205 tccccaccctcgcctatcccatctctaatcctgactatctccctccaccacgaagaacaacttcggcccgcatcctcc 42177128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 24794262 - 24794314
Alignment:
Q  209 ccatctcaaattctcgctatctccctccaccaagaagaacaactccggccccc 261  Q
    ||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||    
T  24794262 ccatctcgaatcctccctacctccctccaccaagaagaacaactccggccccc 24794314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 17659356 - 17659395
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  17659356 ctccctccaccaagaagaacaactccggcccccaacctcc 17659395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 38046879 - 38046922
Alignment:
Q  225 ctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||| || ||||||||||| |||||||||||||||    
T  38046879 ctatctccctccatcacgaagaacaacttcggcccccatcctcc 38046922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 37165743 - 37165697
Alignment:
Q  222 tcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||||||||||| ||||  ||||||||||||| |||||    
T  37165743 tcgctatctccctccaccaagtagaaacactccggcccccaacctcc 37165697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 43249406 - 43249370
Alignment:
Q  231 ccctccaccaagaagaacaactccggcccccatcctc 267  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  43249406 ccctccaccaaaaagaacaactccggcccccaacctc 43249370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 148 - 290
Target Start/End: Complemental strand, 19735431 - 19735289
Alignment:
Q  148 accgtcacccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaa 247  Q
    |||||| ||||||  ||||||||||| || || |||||  ||||| |  |||||   ||| ||||||| ||| ||| ||||||||| |||||||||||||    
T  19735431 accgtctcccacctgtctcctaacacccgacacaaacctaccctctccgccctctcttatcccatctctaatcctcactatctcccgccaccaagaagaa 19735332  T
Q  248 caactccggcccccatcctcccctccatacctagccaccaaca 290  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  19735331 caactccggcccccatcctccgcaccatacctagccaccaaca 19735289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 19755718 - 19755831
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| ||||||||||||  |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| |||||||||||||||| |||||||||||||    
T  19755718 cccaccctcctcctaacacacatcccaaaccatccctctccaccctcacctatcccatctctaatcctcactatctccctccaccacgaagaacaactcc 19755817  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  19755818 ggcccccatcctcc 19755831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 19784088 - 19783975
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| ||||||||||||  |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| |||||||||||||||| |||||||||||||    
T  19784088 cccaccctcctcctaacacacatcccaaaccatccctctccaccctcacctatcccatctctaatcctcactatctccctccaccacgaagaacaactcc 19783989  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  19783988 ggcccccatcctcc 19783975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 48312545 - 48312658
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  ||| |||||| ||||| | ||||||| ||||  |||||| ||| ||  |||||||||||||||| |||||||||||||    
T  48312545 cccaccctcctcctaacacaatccacaaaccaaccctctccaccctcgcctatctcatctctaatcctgactatctccctccaccacgaagaacaactcc 48312644  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  48312645 ggcccccatcctcc 48312658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 157 - 268
Target Start/End: Complemental strand, 5789779 - 5789668
Alignment:
Q  157 cacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactccgg 256  Q
    |||||| || |||||||||| |  |||||| ||||||| ||||||| |||| ||||||| |||  || | ||||||| ||||||||||||||||||||||    
T  5789779 caccctcctactaacacacgacgcaaaccatccctccccaccctcgcctatcccatctctaatcttcacaatctcccgccaccaagaagaacaactccgg 5789680  T
Q  257 cccccatcctcc 268  Q
    ||||||||||||    
T  5789679 cccccatcctcc 5789668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 1828229 - 1828119
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| ||||||||| ||||||||||||||||||||    
T  1828229 cccaccctcctcctaacacaagacccaaaccatccctcaccaccctcacctatcccatctctaatcctcactatctcccgccaccaagaagaacaactcc 1828130  T
Q  255 ggcccccatcc 265  Q
    |||||||||||    
T  1828129 ggcccccatcc 1828119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 54482848 - 54482735
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  ||| |||||| | ||| | ||||||| |||| ||||||| ||| ||  |||||||||||||||| |||||||||||||    
T  54482848 cccaccctcctcctaacacaatccacaaaccaactctctccaccctcgcctatcccatctctaatcctgactatctccctccaccacgaagaacaactcc 54482749  T
Q  255 ggcccccatcctcc 268  Q
    | ||||||||||||    
T  54482748 gacccccatcctcc 54482735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 55725395 - 55725282
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    ||||||||  ||||||||||  ||  |||||| ||||||| ||||||| |||| |||||||  ||  |  ||||||||||||||||||||||||||||||    
T  55725395 cccaccctcatcctaacacaatccgcaaaccaaccctccccaccctcgcctatcccatctctgatcatgactatctccctccaccaagaagaacaactcc 55725296  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  55725295 ggcccccatcctcc 55725282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 23642280 - 23642167
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    ||||| || ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| | |||||||||||||| |||||||||||||    
T  23642280 cccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatctctaatcctcacaatctccctccaccacgaagaacaactcc 23642181  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  23642180 ggcccccatcctcc 23642167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 23647938 - 23647825
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    ||||| || ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| | |||||||||||||| |||||||||||||    
T  23647938 cccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatctctaatcctcacaatctccctccaccacgaagaacaactcc 23647839  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  23647838 ggcccccatcctcc 23647825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 47419255 - 47419368
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    ||||| || ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| | |||||||||||||| |||||||||||||    
T  47419255 cccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatctctaatcctcacaatctccctccaccacgaagaacaactcc 47419354  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  47419355 ggcccccatcctcc 47419368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 268
Target Start/End: Complemental strand, 11586885 - 11586774
Alignment:
Q  157 cacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactccgg 256  Q
    |||||| |||||||||||  ||   ||||| ||| ||| ||||||  |||| ||||||| ||| ||  |||||||||||||||||||||||||||| |||    
T  11586885 caccctcctcctaacacaatccgagaaccagcccaccccaccctcacctatcccatctctaatcctaactatctccctccaccaagaagaacaacttcgg 11586786  T
Q  257 cccccatcctcc 268  Q
    ||||||| ||||    
T  11586785 cccccattctcc 11586774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 42778759 - 42778802
Alignment:
Q  225 ctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  42778759 ctatctccctccaccaagaagaacaactccggcccccaacctcc 42778802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 2821723 - 2821618
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  |   |||||| ||||||| ||||||| |||| ||||||| ||| ||  |||||||||||||||| ||||||||  |||    
T  2821723 cccaccctcctcctaacacaatctgcaaaccaaccctccccaccctcgcctatcccatctctaatcctgactatctccctccaccacgaagaacatatcc 2821624  T
Q  255 ggcccc 260  Q
    ||||||    
T  2821623 ggcccc 2821618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 42953129 - 42953077
Alignment:
Q  209 ccatctcaaattctcgctatctccctccaccaagaagaacaactccggccccc 261  Q
    ||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||    
T  42953129 ccatctcgaatcctccctacctccctccaccaagaagaacaactccggccccc 42953077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 8935599 - 8935638
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  8935599 ctcccgccaccaagaagaacaactccggcccccatcctcc 8935638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 15740741 - 15740781
Alignment:
Q  225 ctatctccctccaccaagaagaacaactccggcccccatcc 265  Q
    ||||||||| |||||| ||||||||||||||||||||||||    
T  15740741 ctatctcccgccaccatgaagaacaactccggcccccatcc 15740781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 19648234 - 19648274
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctccc 269  Q
    ||||| |||||||||||||||||||||||||||| ||||||    
T  19648234 ctcccgccaccaagaagaacaactccggcccccaacctccc 19648274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 46146177 - 46146241
Alignment:
Q  204 ctattccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||| ||||||  ||| ||| ||||||||| ||||||||| ||||||||||||||||||| ||||    
T  46146177 ctatcccatctataatcctcactatctcccgccaccaagatgaacaactccggcccccattctcc 46146241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 53486551 - 53486511
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctccc 269  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  53486551 ctccctccaccaagaagaacaactccgacccccaacctccc 53486511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 10562948 - 10562909
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  10562948 ctccctccaccaagaagaacaactctggcccccaacctcc 10562909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 23657822 - 23657861
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  23657822 ctcccgccaccaagaagaacaacttcggcccccatcctcc 23657861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 49925882 - 49925843
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  49925882 ctcccgccaccaagaagaacaactccggcccccaacctcc 49925843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 36183055 - 36183101
Alignment:
Q  222 tcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||||||||||| ||||  ||||||||||||| |||||    
T  36183055 tcgctatctccctccaccaagtagaaacactccggcccccaacctcc 36183101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 268
Target Start/End: Complemental strand, 4524235 - 4524202
Alignment:
Q  235 ccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||||||||||||||||||||||||||| |||||    
T  4524235 ccaccaagaagaacaactccggcccccaacctcc 4524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 262
Target Start/End: Original strand, 20396107 - 20396140
Alignment:
Q  229 ctccctccaccaagaagaacaactccggccccca 262  Q
    ||||| ||||||||||||||||||||||||||||    
T  20396107 ctcccgccaccaagaagaacaactccggccccca 20396140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 46146260 - 46146300
Alignment:
Q  272 ccatacctagccaccaacaccttactccacaacccatctct 312  Q
    ||||| ||||||||||||||| ||| |||||||||||||||    
T  46146260 ccatatctagccaccaacaccctacgccacaacccatctct 46146300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 48312677 - 48312717
Alignment:
Q  272 ccatacctagccaccaacaccttactccacaacccatctct 312  Q
    ||||||||||||||||||||| ||| ||||||||| |||||    
T  48312677 ccatacctagccaccaacaccctacgccacaacccctctct 48312717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 53780570 - 53780610
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctccc 269  Q
    ||||||||||||||||||||||||| | |||||| ||||||    
T  53780570 ctccctccaccaagaagaacaactctgacccccaacctccc 53780610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 235127 - 235014
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| ||||||||||||| |  ||| || ||||| | ||||||| |||| ||||||| ||| ||| |||||||||||||||| |||||||||||||    
T  235127 cccaccctcctcctaacacacgtcccaaatcagccctctccaccctcgcctatcccatctctaatcctcactatctccctccaccacgaagaacaactcc 235028  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  235027 ggcccccatcctcc 235014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 148 - 268
Target Start/End: Original strand, 17721079 - 17721199
Alignment:
Q  148 accgtcacccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaa 247  Q
    |||||| |||||||| ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| |||||||||||||||| ||||||    
T  17721079 accgtctcccaccctcctcctaacacaagacccaaaccaaccctctccaccctcacctatcccatctctaatcctcactatctccctccaccatgaagaa 17721178  T
Q  248 caactccggcccccatcctcc 268  Q
    |||||||||||||||||||||    
T  17721179 caactccggcccccatcctcc 17721199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 31423054 - 31423166
Alignment:
Q  156 ccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactccg 255  Q
    ||||||| |||||||||||  ||  |||||| ||||||| ||||||| |||| ||||||| ||| ||  ||||||||||| |||| ||||||||||||||    
T  31423054 ccaccctcctcctaacacaacccgcaaaccatccctccccaccctcgcctatcccatctctaatcctgactatctccctcaaccacgaagaacaactccg 31423153  T
Q  256 gcccccatcctcc 268  Q
    |||||||||||||    
T  31423154 gcccccatcctcc 31423166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 11276937 - 11276824
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| ||||||||||| | |  |||||||||||| | ||||||  |||| ||||||| ||| ||| |||||||||||||||| || ||||||||||    
T  11276937 cccaccctcctcctaacacaagacccaaaccacccctctccaccctcacctatcccatctctaatcctcactatctccctccaccacgacgaacaactcc 11276838  T
Q  255 ggcccccatcctcc 268  Q
    || |||||||||||    
T  11276837 gggccccatcctcc 11276824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 148 - 260
Target Start/End: Original strand, 47877427 - 47877539
Alignment:
Q  148 accgtcacccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaa 247  Q
    |||||| ||||||||  |||||||||||| |  |||||| || || | ||||||| |||| ||||||| ||| ||| |||||||||||||||| ||||||    
T  47877427 accgtctcccaccctcatcctaacacacgtcccaaaccatccatctccaccctcgcctatcccatctctaatcctcactatctccctccaccacgaagaa 47877526  T
Q  248 caactccggcccc 260  Q
    |||||||||||||    
T  47877527 caactccggcccc 47877539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 4937817 - 4937704
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    ||||| || ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| | |||||||||||||| |||||||||||||    
T  4937817 cccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatctctaatcctcacaatctccctccaccacgaagaacaactcc 4937718  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  4937717 ggcccccatcctcc 4937704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 39931223 - 39931172
Alignment:
Q  217 aattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||    
T  39931223 aattctcactatctcccaccaccaacaagaacaactccggcccccatcctcc 39931172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 29968425 - 29968538
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||| | ||||||||||| | |  ||| || ||||| | ||||||  |||| ||||||| ||| ||| |||||||||||||||| || ||||||||||    
T  29968425 cccaccttcctcctaacacaagacccaaatcatccctctccaccctcacctatcccatctctaatcctcactatctccctccaccacgacgaacaactcc 29968524  T
Q  255 ggcccccatcctcc 268  Q
    ||||| ||||||||    
T  29968525 ggcccgcatcctcc 29968538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 34232224 - 34232264
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctccc 269  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  34232224 ctccctccaccaagaagaacaactccggcccccaacctccc 34232264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 36364030 - 36364080
Alignment:
Q  218 attctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||||| ||||||||||||| |||||||||||||| |||||| ||||||||    
T  36364030 attctcactatctccctccatcaagaagaacaacttcggccctcatcctcc 36364080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 37255209 - 37255322
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  ||  |||||| | ||||  ||||||| ||||  |||||| ||| ||  ||||||||||||| || || ||||||||||    
T  37255209 cccaccctcctcctaacacaacccgcaaaccaactctcctcaccctcgcctatctcatctctaatcctgactatctccctccatcacgatgaacaactcc 37255308  T
Q  255 ggcccccatcctcc 268  Q
     |||||||||||||    
T  37255309 agcccccatcctcc 37255322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 41805352 - 41805295
Alignment:
Q  235 ccaccaagaagaacaactccggcccccatcctcccctccatacctagccaccaacacc 292  Q
    |||||||||||||| ||||||||||||| ||||| | ||||| || ||||||||||||    
T  41805352 ccaccaagaagaaccactccggcccccaacctcctcaccatatctcgccaccaacacc 41805295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 4077800 - 4077840
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctccc 269  Q
    |||||||||||||| ||||||||||||||||||| ||||||    
T  4077800 ctccctccaccaagtagaacaactccggcccccaacctccc 4077840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 23887602 - 23887648
Alignment:
Q  222 tcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||||||||||||||||  |||||| |||||| |||||    
T  23887602 tcgctatctccctccaccaagaagaaacactccgacccccaacctcc 23887648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 23898778 - 23898824
Alignment:
Q  222 tcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||||||||||||||||  |||||| |||||| |||||    
T  23898778 tcgctatctccctccaccaagaagaaacactccgacccccaacctcc 23898824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 39931166 - 39931122
Alignment:
Q  259 cccatcctcccctccatacctagccaccaacaccttactccacaa 303  Q
    |||||||||| | ||||||||||||||||||||| ||| ||||||    
T  39931166 cccatcctccacaccatacctagccaccaacaccctacaccacaa 39931122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 16179398 - 16179511
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| || |||||||||| || |||||| | ||||| ||||||| |||| ||||||| ||| ||| | ||||||| ||||||||||||||||||||    
T  16179398 cccaccctcctactaacacacgacacaaaccatctctccccaccctcgcctatcccatctctaatcctcacaatctcccgccaccaagaagaacaactcc 16179497  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  16179498 ggcccccatcctcc 16179511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 34332504 - 34332391
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| ||||||||||||| |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| |||||||||||||||| |||||||||||||    
T  34332504 cccaccctcctcctaacacacgtcccaaaccatccctctccaccctcacctatcccatctctaatcctcactatctccctccaccacgaagaacaactcc 34332405  T
Q  255 ggcccccatcctcc 268  Q
     |||||||||||||    
T  34332404 cgcccccatcctcc 34332391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 17097572 - 17097488
Alignment:
Q  149 ccgtcacccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccc 233  Q
    ||||| ||||||| |||||||||||||| || |||||||||||||| ||||||| |||| ||||||| ||||||| |||||||||    
T  17097572 ccgtcccccacccgtctcctaacacacgacacaaaccacccctccccaccctcgcctatcccatctctaattctcactatctccc 17097488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 306
Target Start/End: Original strand, 15313040 - 15313192
Alignment:
Q  162 ttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactccggccccc 261  Q
    ||||||||||||||| |  |||||| ||||||| ||||||| ||||  |||||| ||| ||| |||||| || ||| ||||||||||||||||  |||||    
T  15313040 ttctcctaacacacgacgcaaaccatccctccccaccctcgcctatctcatctctaatcctcactatcttccgccatcaagaagaacaactccaaccccc 15313139  T
Q  262 atcct--------cccctccatacctagccaccaacaccttactccacaaccc 306  Q
    |||||        || ||||||||||||||||||| ||||||| |||||||||    
T  15313140 atcctccaaacccccactccatacctagccaccaaaaccttacgccacaaccc 15313192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 17077889 - 17077815
Alignment:
Q  238 ccaagaagaacaactccggcccccatcctcccctccatacctagccaccaacaccttactccacaacccatctct 312  Q
    ||||||||||||||| ||||||||||||||  |||| |||||||||||||  ||||||| |||||||||||||||    
T  17077889 ccaagaagaacaacttcggcccccatcctctactccgtacctagccaccagaaccttacgccacaacccatctct 17077815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 2364728 - 2364841
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    ||||| || ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| | |||||||||||||| |||||||||||||    
T  2364728 cccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatctctaatcctcacaatctccctccaccacgaagaacaactcc 2364827  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  2364828 ggcccccatcctcc 2364841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 19919918 - 19919805
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| ||||||||||| | |  |||||| ||||| |  |||||  |||| ||||||| ||| ||| | |||||||||||||| |||||||||||||    
T  19919918 cccaccctcctcctaacacaagtctgaaaccaaccctcacctccctcacctatcccatctctaatcctcacaatctccctccaccacgaagaacaactcc 19919819  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  19919818 ggcccccatcctcc 19919805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 48569728 - 48569615
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  ||| |||||| ||||||| ||||||  |||| ||||||| ||| ||  ||||||||||| |||| |||||||| || |    
T  48569728 cccaccctcctcctaacacaatccacaaaccaaccctccccaccctcacctatcccatctctaatcctgactatctccctctaccacgaagaacagcttc 48569629  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  48569628 ggcccccatcctcc 48569615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 10323260 - 10323147
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    ||||| || ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| | |||||||||||||| |||||| ||||||    
T  10323260 cccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatctctaatcctcacaatctccctccaccacgaagaataactcc 10323161  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  10323160 ggcccccatcctcc 10323147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 12341944 - 12341831
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| ||| |||||||  |  ||||||| ||||||| ||||||  |||| ||||||| ||| ||  | |||||||||||||| ||||| |||||||    
T  12341944 cccaccctcctcttaacacaacctgtaaaccagccctccccaccctcacctatcccatctctaatcctaacaatctccctccaccacgaagagcaactcc 12341845  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  12341844 ggcccccatcctcc 12341831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 19891128 - 19891241
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  |   |||||| || |||  |||||||  ||| ||||||| ||| ||  |||||||||||||||| ||||||||||| |    
T  19891128 cccaccctcctcctaacacaacctgcaaaccaaccttcctcaccctcgcttatcccatctctaatcctgactatctccctccaccacgaagaacaacttc 19891227  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  19891228 ggcccccatcctcc 19891241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 962803 - 962739
Alignment:
Q  204 ctattccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||| ||||| | ||| ||| ||||||||||||||||||| ||||||||||| ||||||||||||    
T  962803 ctatcccatccctaatcctcactatctccctccaccaagatgaacaactccgacccccatcctcc 962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 14864100 - 14864048
Alignment:
Q  209 ccatctcaaattctcgctatctccctccaccaagaagaacaactccggccccc 261  Q
    ||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||    
T  14864100 ccatctcgaatcctccctacctccctccaccaagaagaacaactccggccccc 14864048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 21740138 - 21740099
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  21740138 ctccctccaccaagaagaacaactccggcccccaacctcc 21740099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 43121282 - 43121243
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  43121282 ctccctccaccaagaagaacaactccggcccccaacctcc 43121243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 962732 - 962680
Alignment:
Q  260 ccatcctcccctccatacctagccaccaacaccttactccacaacccatctct 312  Q
    |||||| |||| |||||||||||||| |||||| ||| |||||||||||||||    
T  962732 ccatccgccccaccatacctagccactaacaccctacgccacaacccatctct 962680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 3141351 - 3141415
Alignment:
Q  204 ctattccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||| ||||||| | | ||| ||||||||| ||||||||| |||||| |||||||||||||||||    
T  3141351 ctatcccatctctagtcctcactatctcccgccaccaagatgaacaattccggcccccatcctcc 3141415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 48569596 - 48569556
Alignment:
Q  272 ccatacctagccaccaacaccttactccacaacccatctct 312  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  48569596 ccatacctagccaccaacaccctacgccacaacccatctct 48569556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 20531678 - 20531631
Alignment:
Q  217 aattctcgctatctccctccaccaagaagaacaactccggcccccatc 264  Q
    ||||||| ||||||||||||||||||||||| ||||||  ||||||||    
T  20531678 aattctcactatctccctccaccaagaagaataactccaacccccatc 20531631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 3141434 - 3141474
Alignment:
Q  272 ccatacctagccaccaacaccttactccacaacccatctct 312  Q
    |||||||||||||| |||||| ||| |||||||||||||||    
T  3141434 ccatacctagccactaacaccctacgccacaacccatctct 3141474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 23819096 - 23819136
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctccc 269  Q
    ||||||||||| ||||||||||||||| |||||| ||||||    
T  23819096 ctccctccacctagaagaacaactccgacccccaacctccc 23819136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 261
Target Start/End: Original strand, 50544749 - 50544781
Alignment:
Q  229 ctccctccaccaagaagaacaactccggccccc 261  Q
    ||||||||| |||||||||||||||||||||||    
T  50544749 ctccctccatcaagaagaacaactccggccccc 50544781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 8e-24; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 155 - 303
Target Start/End: Complemental strand, 21629796 - 21629648
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  |   |||||| ||||||| ||||||   ||| ||||||| ||| ||  | |||||||||||||| ||||| |||||||    
T  21629796 cccaccctcctcctaacacaacctgaaaaccagccctccccaccctcacttatcccatctctaatcctaacaatctccctccaccacgaagagcaactcc 21629697  T
Q  255 ggcccccatcctcccctccatacctagccaccaacaccttactccacaa 303  Q
    |||||||||||||| | ||||||||||||| ||||||| ||||||||||    
T  21629696 ggcccccatcctccacgccatacctagccaacaacaccctactccacaa 21629648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 148 - 268
Target Start/End: Complemental strand, 24767125 - 24767005
Alignment:
Q  148 accgtcacccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaa 247  Q
    ||||||||||||||| |||||||||||||||  |||||| ||||| | ||||||   ||| ||||| | ||| ||| |||||||||||||||| ||||||    
T  24767125 accgtcacccaccctcctcctaacacacgccccaaaccagccctctccaccctcacatatcccatccctaatcctcactatctccctccaccacgaagaa 24767026  T
Q  248 caactccggcccccatcctcc 268  Q
    |||||||| ||||||||||||    
T  24767025 caactccgacccccatcctcc 24767005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 10576939 - 10576826
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  | |||||||| ||||||| ||||||  |||| ||||||| ||| ||  |||||||||||||||| ||||| |||||||    
T  10576939 cccaccctcctcctaacacaacctataaaccagccctccccaccctcacctatcccatctctaatcctaactatctccctccaccacgaagagcaactcc 10576840  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  10576839 ggcccccatcctcc 10576826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 17606023 - 17605910
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||||||  |  ||||||| ||||||| ||||||  |||| ||||||| ||| ||| | |||||||||||| |||||||||||||||    
T  17606023 cccaccctcctcctaacacaacctgtaaaccagccctccccaccctcacctatcccatctctaatcctcacaatctccctccacaaagaagaacaactcc 17605924  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  17605923 ggcccccatcctcc 17605910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 14372691 - 14372567
Alignment:
Q  144 cggaaccgtcacccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaaga 243  Q
    ||||||| || |||||||| ||||| |||||  ||  |||||| ||||||| ||||||  |||| || |||| ||| ||  |||||||||||||||||||    
T  14372691 cggaaccatcccccaccctcctcctgacacaacccgaaaaccaaccctccccaccctcatctatcccgtctctaatcctgactatctccctccaccaaga 14372592  T
Q  244 agaacaactccggcccccatcctcc 268  Q
    |||||||||||||||||||||||||    
T  14372591 agaacaactccggcccccatcctcc 14372567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 304
Target Start/End: Complemental strand, 15956608 - 15956516
Alignment:
Q  209 ccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcccctccatacctagccaccaacaccttactccacaac 304  Q
    ||||||||||| ||| || |||||||||||||||||   |||||| ||||||||||| || | ||||||||||||||||||||||||| |||||||    
T  15956608 ccatctcaaatcctcactttctccctccaccaagaa---caactctggcccccatccgccacaccatacctagccaccaacaccttacgccacaac 15956516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 2554057 - 2554170
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||  |||  ||||||||||||||| |||||||||||||    
T  2554057 cccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctatcccatctctaaccctcattatctccctccaccacgaagaacaactcc 2554156  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  2554157 ggcccccatcctcc 2554170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 10922066 - 10922115
Alignment:
Q  217 aattctcgctatctccctccaccaagaagaacaactccggcccccatcct 266  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10922066 aattctcactatctccctccaccaagaagaacaactccggcccccatcct 10922115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 260
Target Start/End: Complemental strand, 20882696 - 20882617
Alignment:
Q  181 aaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccc 260  Q
    |||||| ||||||| ||||||| |||| ||||||| ||| ||  |||||||||||||||| |||||||||||||||||||    
T  20882696 aaaccaaccctccccaccctcgcctatcccatctctaatcctgactatctccctccaccacgaagaacaactccggcccc 20882617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 18682193 - 18682150
Alignment:
Q  225 ctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  18682193 ctatctcccgccaccaagaagaacaactccggcccccatcctcc 18682150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 649698 - 649641
Alignment:
Q  212 tctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctccc 269  Q
    |||| ||||| | ||| |||||||||||||||||||||||||||||||||| ||||||    
T  649698 tctctaattcgccctacctccctccaccaagaagaacaactccggcccccaacctccc 649641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 13938219 - 13938283
Alignment:
Q  204 ctattccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||| ||||||| ||| ||| ||||||||  ||||||||| ||||||||||||||||||||||||    
T  13938219 ctatcccatctctaatcctcactatctcctgccaccaagatgaacaactccggcccccatcctcc 13938283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 503147 - 503108
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  503147 ctcccgccaccaagaagaacaactccggcccccatcctcc 503108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 8264748 - 8264787
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  8264748 ctcccgccaccaagaagaacaactccggcccccatcctcc 8264787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 11060477 - 11060438
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  11060477 ctccctccaccaagaagaacaactccggcccccaacctcc 11060438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 17078805 - 17078766
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  17078805 ctccctccaccaagaagaacaactccggcccccaacctcc 17078766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 18051064 - 18051025
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  18051064 ctccctccaccaagaagaacaactccggcccccaacctcc 18051025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 10362638 - 10362690
Alignment:
Q  209 ccatctcaaattctcgctatctccctccaccaagaagaacaactccggccccc 261  Q
    ||||||| |||| | |||||||||| |||||||||||||| ||||||||||||    
T  10362638 ccatctctaattttggctatctcccgccaccaagaagaaccactccggccccc 10362690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 5085641 - 5085602
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  5085641 ctcccgccaccaagaagaacaacttcggcccccatcctcc 5085602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 13086044 - 13086103
Alignment:
Q  209 ccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||| ||| ||| ||| |||| |||||||| |||||||||||||||||||| |||||    
T  13086044 ccatctctaatcctccctacctccttccaccaaaaagaacaactccggcccccaacctcc 13086103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 26514242 - 26514288
Alignment:
Q  222 tcgctatctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||||||||||  ||||| ||||||||||||| |||||    
T  26514242 tcgctatctccctccaccaaatagaaccactccggcccccaacctcc 26514288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 33805291 - 33805337
Alignment:
Q  215 caaattctcgctatctccctccaccaagaagaacaactccggccccc 261  Q
    ||||| ||| ||| ||||| |||||||||||||||||||||||||||    
T  33805291 caaatcctccctacctcccgccaccaagaagaacaactccggccccc 33805337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 17577335 - 17577294
Alignment:
Q  227 atctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||||  ||||||||||| ||||||||||||||    
T  17577335 atctccctccaccacaaagaacaactctggcccccatcctcc 17577294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 17873434 - 17873394
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctccc 269  Q
    ||||||||||||||||||||||||||| || ||| ||||||    
T  17873434 ctccctccaccaagaagaacaactccgccctccaacctccc 17873394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 4 - 108
Alignment:
Q  164 ctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactccggcccccat 263  Q
    |||||||||||  ||  |||||| ||||||  ||||||| |||| ||||||| ||||||  |||||||||||||||||||||| ||||| ||||||||||    
T  4 ctcctaacacaatccgcaaaccaaccctccacaccctcgcctatcccatctctaattctgactatctccctccaccaagaagagcaacttcggcccccat 103  T
Q  264 cctcc 268  Q
    |||||    
T  104 cctcc 108  T

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Target: scaffold1350; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 127 - 167
Alignment:
Q  272 ccatacctagccaccaacaccttactccacaacccatctct 312  Q
    ||||||||| ||||||||||||||| |||||| ||||||||    
T  127 ccatacctaaccaccaacaccttacgccacaatccatctct 167  T

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Target: scaffold0472 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 3703 - 3816
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    |||||||| |||||||| || | |  |||||||||||| | ||||||  |||| ||||||| ||| ||| |||||||||||||||| || ||||||||||    
T  3703 cccaccctcctcctaacgcaggacccaaaccacccctctccaccctcacctatcccatctctaatcctcactatctccctccaccacgacgaacaactcc 3802  T
Q  255 ggcccccatcctcc 268  Q
    |||||||| |||||    
T  3803 ggcccccaacctcc 3816  T

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Target: scaffold0034 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 105532 - 105419
Alignment:
Q  155 cccacccttctcctaacacacgccataaaccacccctcccaaccctcggctattccatctcaaattctcgctatctccctccaccaagaagaacaactcc 254  Q
    ||||| || ||||||||||| | |  |||||| ||||| | ||||||  |||| ||||||| ||| ||| | |||||||||||||| |||||||||||||    
T  105532 cccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatctctaatcctcacaatctccctccaccacgaagaacaactcc 105433  T
Q  255 ggcccccatcctcc 268  Q
    ||||||||||||||    
T  105432 ggcccccatcctcc 105419  T

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Target: scaffold0912 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0912
Description:

Target: scaffold0912; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 2488 - 2449
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  2488 ctcccgccaccaagaagaacaactccggcccccaacctcc 2449  T

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Target: scaffold0179 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 8057 - 8096
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  8057 ctccctccaccaagacgaacaactccggcccccaacctcc 8096  T

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Target: scaffold0179; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 12991 - 13030
Alignment:
Q  229 ctccctccaccaagaagaacaactccggcccccatcctcc 268  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  12991 ctccctccaccaagacgaacaactccggcccccaacctcc 13030  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 262
Target Start/End: Original strand, 182640 - 182673
Alignment:
Q  229 ctccctccaccaagaagaacaactccggccccca 262  Q
    ||||| ||||||||||||||||||||||||||||    
T  182640 ctcccgccaccaagaagaacaactccggccccca 182673  T

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