View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1320_low_65 (Length: 262)

Name: NF1320_low_65
Description: NF1320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1320_low_65
NF1320_low_65
[»] chr7 (41 HSPs)
chr7 (29-230)||(7412710-7412910)
chr7 (51-229)||(21900981-21901160)
chr7 (61-229)||(1379207-1379375)
chr7 (61-229)||(2446906-2447074)
chr7 (61-229)||(5049706-5049874)
chr7 (61-229)||(6795698-6795866)
chr7 (47-229)||(6020658-6020840)
chr7 (61-229)||(1948427-1948595)
chr7 (61-229)||(23612649-23612817)
chr7 (51-229)||(10830918-10831097)
chr7 (51-229)||(11024710-11024889)
chr7 (47-229)||(3923887-3924069)
chr7 (47-226)||(14287961-14288140)
chr7 (47-226)||(14299146-14299325)
chr7 (47-226)||(36875791-36875970)
chr7 (47-229)||(8185186-8185368)
chr7 (47-229)||(8192746-8192928)
chr7 (47-229)||(33850437-33850619)
chr7 (47-229)||(39433153-39433335)
chr7 (47-229)||(48346890-48347072)
chr7 (47-229)||(48353274-48353456)
chr7 (32-229)||(19090039-19090236)
chr7 (61-229)||(9642710-9642878)
chr7 (61-229)||(15914898-15915066)
chr7 (61-229)||(26602172-26602340)
chr7 (51-121)||(10861392-10861462)
chr7 (47-229)||(21642764-21642946)
chr7 (61-229)||(15949419-15949587)
chr7 (61-229)||(45433846-45434014)
chr7 (51-229)||(8142239-8142418)
chr7 (55-229)||(27954340-27954514)
chr7 (194-229)||(22854000-22854035)
chr7 (90-128)||(8881284-8881322)
chr7 (51-97)||(20403980-20404026)
chr7 (47-97)||(41542714-41542764)
chr7 (54-123)||(29032503-29032572)
chr7 (47-97)||(28442700-28442750)
chr7 (55-93)||(43364504-43364542)
chr7 (152-229)||(27951200-27951277)
chr7 (45-97)||(37522044-37522096)
chr7 (45-97)||(48455631-48455683)
[»] chr2 (29 HSPs)
chr2 (32-229)||(13163050-13163247)
chr2 (32-230)||(11909743-11909941)
chr2 (51-229)||(36842038-36842216)
chr2 (29-229)||(17788885-17789085)
chr2 (61-229)||(34834606-34834774)
chr2 (61-229)||(34841050-34841218)
chr2 (51-229)||(41455856-41456035)
chr2 (61-229)||(2157872-2158040)
chr2 (61-229)||(2164288-2164456)
chr2 (47-229)||(21331788-21331970)
chr2 (47-229)||(42931166-42931348)
chr2 (61-229)||(12951056-12951224)
chr2 (61-229)||(36781978-36782146)
chr2 (47-229)||(15852796-15852978)
chr2 (87-229)||(37439327-37439469)
chr2 (61-229)||(43268119-43268287)
chr2 (91-229)||(21341720-21341858)
chr2 (87-229)||(24852820-24852962)
chr2 (84-229)||(28144779-28144924)
chr2 (61-229)||(16817124-16817292)
chr2 (61-229)||(16856281-16856449)
chr2 (47-229)||(45012229-45012411)
chr2 (147-229)||(29485241-29485323)
chr2 (61-229)||(2021242-2021410)
chr2 (177-229)||(34745085-34745137)
chr2 (51-229)||(13901750-13901929)
chr2 (51-229)||(21067751-21067930)
chr2 (47-97)||(44611497-44611547)
chr2 (47-97)||(33034004-33034054)
[»] chr1 (40 HSPs)
chr1 (32-227)||(47646901-47647097)
chr1 (46-229)||(23251597-23251780)
chr1 (47-229)||(45619938-45620120)
chr1 (86-229)||(31473544-31473687)
chr1 (45-229)||(13432093-13432277)
chr1 (87-229)||(13249004-13249144)
chr1 (51-229)||(38672570-38672749)
chr1 (51-229)||(5357541-5357719)
chr1 (61-229)||(6238915-6239083)
chr1 (51-229)||(39806307-39806486)
chr1 (61-229)||(45016041-45016209)
chr1 (51-229)||(28413466-28413645)
chr1 (87-229)||(30660127-30660269)
chr1 (61-229)||(41297777-41297945)
chr1 (61-229)||(42092156-42092324)
chr1 (61-229)||(43686889-43687057)
chr1 (51-229)||(2824613-2824791)
chr1 (47-229)||(44916584-44916766)
chr1 (47-229)||(32797969-32798151)
chr1 (91-229)||(44241647-44241785)
chr1 (61-229)||(1115776-1115944)
chr1 (61-229)||(23762130-23762298)
chr1 (61-229)||(29001991-29002159)
chr1 (90-229)||(35085295-35085434)
chr1 (98-229)||(41305313-41305444)
chr1 (47-229)||(26621716-26621898)
chr1 (47-229)||(39053132-39053314)
chr1 (47-229)||(39059504-39059686)
chr1 (61-229)||(9869365-9869533)
chr1 (61-229)||(11913056-11913224)
chr1 (90-226)||(7063465-7063602)
chr1 (61-229)||(1174866-1175034)
chr1 (45-93)||(21815064-21815112)
chr1 (157-229)||(28996371-28996443)
chr1 (47-229)||(4599775-4599957)
chr1 (87-129)||(6847843-6847885)
chr1 (106-226)||(31072623-31072743)
chr1 (54-97)||(9316216-9316259)
chr1 (91-128)||(39456667-39456704)
chr1 (55-127)||(9269016-9269087)
[»] chr3 (34 HSPs)
chr3 (32-230)||(2785936-2786135)
chr3 (49-229)||(20952548-20952728)
chr3 (47-229)||(9330932-9331114)
chr3 (47-229)||(6036512-6036694)
chr3 (47-229)||(32746616-32746798)
chr3 (47-229)||(9570341-9570524)
chr3 (47-229)||(9576843-9577026)
chr3 (47-229)||(24179320-24179502)
chr3 (61-229)||(4311280-4311448)
chr3 (61-229)||(23068724-23068892)
chr3 (47-230)||(20650918-20651101)
chr3 (91-229)||(24705101-24705239)
chr3 (47-229)||(27501761-27501943)
chr3 (87-229)||(461223-461365)
chr3 (91-229)||(10941098-10941236)
chr3 (47-229)||(43931823-43932005)
chr3 (87-228)||(17735630-17735771)
chr3 (87-228)||(19036899-19037040)
chr3 (51-229)||(4591045-4591224)
chr3 (92-229)||(47441092-47441229)
chr3 (87-229)||(25692263-25692409)
chr3 (47-229)||(43995324-43995505)
chr3 (87-130)||(17404862-17404905)
chr3 (45-88)||(27900775-27900818)
chr3 (47-97)||(4675180-4675230)
chr3 (47-189)||(25893482-25893624)
chr3 (83-128)||(31095622-31095667)
chr3 (51-111)||(23194315-23194375)
chr3 (83-122)||(546108-546147)
chr3 (46-97)||(4501364-4501415)
chr3 (46-97)||(4506690-4506741)
chr3 (54-120)||(27104377-27104444)
chr3 (194-229)||(41354107-41354142)
chr3 (47-121)||(13015232-13015306)
[»] chr4 (28 HSPs)
chr4 (79-230)||(49359108-49359259)
chr4 (61-229)||(41373247-41373415)
chr4 (47-229)||(55462566-55462748)
chr4 (51-136)||(13003693-13003778)
chr4 (51-229)||(2948095-2948274)
chr4 (47-230)||(5660342-5660525)
chr4 (47-229)||(36754585-36754767)
chr4 (61-229)||(8104141-8104309)
chr4 (61-229)||(16405606-16405774)
chr4 (47-229)||(17457101-17457283)
chr4 (47-229)||(27590551-27590733)
chr4 (47-229)||(37368109-37368291)
chr4 (61-229)||(13594368-13594536)
chr4 (91-229)||(12097406-12097545)
chr4 (47-229)||(16838153-16838335)
chr4 (47-229)||(30211330-30211512)
chr4 (87-229)||(52182961-52183103)
chr4 (147-229)||(37356143-37356225)
chr4 (157-229)||(30238585-30238657)
chr4 (46-128)||(40976529-40976611)
chr4 (87-125)||(6640361-6640399)
chr4 (54-127)||(53895758-53895831)
chr4 (24-80)||(8895241-8895297)
chr4 (52-124)||(26373338-26373410)
chr4 (46-97)||(667596-667647)
chr4 (87-138)||(8895235-8895286)
chr4 (45-128)||(23543436-23543519)
chr4 (157-206)||(13003623-13003672)
[»] chr5 (30 HSPs)
chr5 (45-229)||(30579984-30580168)
chr5 (47-229)||(3413084-3413266)
chr5 (47-229)||(12918744-12918926)
chr5 (51-136)||(33794342-33794427)
chr5 (61-229)||(29980719-29980887)
chr5 (61-229)||(30041038-30041206)
chr5 (61-229)||(34357082-34357250)
chr5 (61-229)||(34358873-34359041)
chr5 (85-229)||(42747370-42747513)
chr5 (51-229)||(2155913-2156092)
chr5 (51-229)||(9843599-9843778)
chr5 (47-229)||(40958411-40958593)
chr5 (61-229)||(29414463-29414631)
chr5 (47-229)||(2958105-2958287)
chr5 (47-229)||(2966574-2966756)
chr5 (91-229)||(12505559-12505697)
chr5 (61-229)||(5876478-5876646)
chr5 (61-229)||(22360224-22360392)
chr5 (61-229)||(42151079-42151247)
chr5 (47-229)||(25894443-25894625)
chr5 (87-229)||(34738426-34738568)
chr5 (84-229)||(19853322-19853466)
chr5 (61-229)||(22314090-22314258)
chr5 (47-229)||(4973809-4973991)
chr5 (83-229)||(37335430-37335576)
chr5 (54-127)||(39655745-39655818)
chr5 (47-97)||(40821251-40821301)
chr5 (83-166)||(17346518-17346601)
chr5 (32-82)||(34738423-34738473)
chr5 (45-93)||(4694142-4694190)
[»] chr6 (39 HSPs)
chr6 (45-229)||(9846765-9846949)
chr6 (83-217)||(22870522-22870656)
chr6 (51-229)||(10081355-10081534)
chr6 (31-230)||(1167272-1167472)
chr6 (61-229)||(1428217-1428385)
chr6 (47-229)||(4186931-4187113)
chr6 (47-229)||(13671611-13671793)
chr6 (47-229)||(31548141-31548323)
chr6 (61-229)||(32328287-32328455)
chr6 (47-230)||(7069495-7069678)
chr6 (47-229)||(7062310-7062492)
chr6 (54-127)||(9518155-9518228)
chr6 (47-229)||(4738117-4738299)
chr6 (47-229)||(9864554-9864736)
chr6 (47-229)||(27670340-27670522)
chr6 (47-229)||(34649046-34649228)
chr6 (47-229)||(34655497-34655679)
chr6 (61-229)||(34711351-34711519)
chr6 (47-229)||(4020029-4020211)
chr6 (47-229)||(4026455-4026637)
chr6 (84-125)||(11015492-11015533)
chr6 (45-229)||(29907103-29907287)
chr6 (45-229)||(30117093-30117277)
chr6 (90-128)||(9949001-9949039)
chr6 (92-127)||(21631563-21631598)
chr6 (47-97)||(7826242-7826292)
chr6 (47-97)||(10800494-10800544)
chr6 (47-97)||(10807205-10807255)
chr6 (47-97)||(14118481-14118531)
chr6 (47-97)||(14122439-14122489)
chr6 (47-97)||(24908675-24908725)
chr6 (87-128)||(25541477-25541518)
chr6 (87-128)||(26604719-26604760)
chr6 (157-229)||(11016444-11016516)
chr6 (45-93)||(18765934-18765982)
chr6 (157-229)||(21262368-21262440)
chr6 (89-123)||(18750427-18750461)
chr6 (24-82)||(26604713-26604771)
chr6 (61-121)||(11058052-11058112)
[»] chr8 (25 HSPs)
chr8 (83-216)||(29336871-29337004)
chr8 (47-128)||(24220166-24220247)
chr8 (61-229)||(6464370-6464538)
chr8 (61-229)||(7311609-7311777)
chr8 (61-229)||(36076227-36076395)
chr8 (61-229)||(8013114-8013282)
chr8 (61-229)||(36005276-36005444)
chr8 (61-229)||(36021593-36021761)
chr8 (51-229)||(7933719-7933898)
chr8 (47-229)||(11357987-11358169)
chr8 (61-229)||(16710462-16710630)
chr8 (61-229)||(45068210-45068378)
chr8 (61-229)||(1238474-1238642)
chr8 (47-229)||(15012634-15012816)
chr8 (47-229)||(26250385-26250567)
chr8 (147-229)||(36425524-36425606)
chr8 (93-229)||(14393990-14394126)
chr8 (87-128)||(1607665-1607706)
chr8 (45-97)||(2268276-2268328)
chr8 (54-110)||(17993263-17993319)
chr8 (46-97)||(44245831-44245882)
chr8 (54-124)||(4861660-4861730)
chr8 (45-97)||(5063927-5063979)
chr8 (157-229)||(24220066-24220138)
chr8 (61-121)||(41242018-41242078)
[»] scaffold0043 (1 HSPs)
scaffold0043 (61-229)||(4799-4967)
[»] scaffold0173 (2 HSPs)
scaffold0173 (51-136)||(24152-24237)
scaffold0173 (157-206)||(24082-24131)
[»] scaffold0510 (2 HSPs)
scaffold0510 (61-229)||(8675-8843)
scaffold0510 (47-229)||(2354-2536)
[»] scaffold0060 (2 HSPs)
scaffold0060 (47-229)||(15417-15599)
scaffold0060 (24-82)||(5905-5963)
[»] scaffold0053 (1 HSPs)
scaffold0053 (61-229)||(49950-50118)
[»] scaffold0343 (1 HSPs)
scaffold0343 (47-229)||(2891-3073)
[»] scaffold0936 (1 HSPs)
scaffold0936 (61-229)||(3058-3226)
[»] scaffold0091 (1 HSPs)
scaffold0091 (54-138)||(14554-14638)
[»] scaffold0513 (1 HSPs)
scaffold0513 (61-189)||(12193-12321)
[»] scaffold0265 (1 HSPs)
scaffold0265 (45-93)||(17697-17745)
[»] scaffold0059 (1 HSPs)
scaffold0059 (54-138)||(16181-16266)
[»] scaffold0291 (1 HSPs)
scaffold0291 (45-93)||(1636-1684)
[»] scaffold0160 (1 HSPs)
scaffold0160 (54-124)||(35032-35102)


Alignment Details
Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 29 - 230
Target Start/End: Complemental strand, 7412910 - 7412710
Alignment:
Q  29 agttcaatcgtatcgcttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgat 128  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||    
T  7412910 agttcaatcgtatcttttaatcgttgatttctcaaactattaaacaatccaatattcgatcgtattgtttaattgacgatttctcagtctactaaacgat 7412811  T
Q  129 tcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattca 228  Q
     |||||||||||| |||||||||||||||||||||||| |||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7412810 ccgaaagcatgaagcttagatactcaaagtgattatcaaaacataaatcccatgtcta-aattcctgttttgatagatgattattctaaacctagattca 7412712  T
Q  229 ag 230  Q
    ||    
T  7412711 ag 7412710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 21901160 - 21900981
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    ||||||||||||||||||||||| |||||||  ||||||| ||||||||||||| |||||||||||||||| |||||| ||||||| | |      ||||    
T  21901160 gttgatttcccaaactattaaacaatccaattgtcgatcgaatcgtttaatcgatgatttctcaatctattcaacgatccgaaagctttatgtaccgata 21901061  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagat-gattattctaaacctagattcaa 229  Q
    |     |||||||||| |||||  |||||||||||| ||||  |||||||||||||  ||||||||||||||||||||||    
T  21901060 ccttgtgtgattatcaaaacatcaatcctatgtctaaaattattgttttgatagataaattattctaaacctagattcaa 21900981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 1379207 - 1379375
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  1379207 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 1379306  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  1379307 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 1379375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 2446906 - 2447074
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  2446906 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 2447005  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  2447006 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 2447074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 5049874 - 5049706
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  5049874 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 5049775  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  5049774 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 5049706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 6795698 - 6795866
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  6795698 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 6795797  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  6795798 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 6795866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 6020840 - 6020658
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||| ||| |||  |||||| | |   ||     
T  6020840 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctataaaatgataagaaagctttaggtttg 6020741  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  6020740 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 6020658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 1948595 - 1948427
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||| ||| ||||    
T  1948595 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatacacaaggtga 1948496  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  1948495 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 1948427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 23612649 - 23612817
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||| ||||||||    
T  23612649 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatacacaaagtga 23612748  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  23612749 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 23612817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 10831097 - 10830918
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    ||||||||||||||||||||||| |||||||  ||||| | |||||||||||||||||||||||||||||| ||| || | ||||  | |      ||||    
T  10831097 gttgatttcccaaactattaaacaatccaattgtcgattggatcgtttaatcgacgatttctcaatctattcaacaatccaaaagttttatgtaccgata 10830998  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagat-gattattctaaacctagattcaa 229  Q
    |     |||||||||| |||||  |||||||||||||||||  |||||||||||||  ||||||||||||||||||||||    
T  10830997 ccttgcgtgattatcaaaacatcaatcctatgtctagaattattgttttgatagataaattattctaaacctagattcaa 10830918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 11024889 - 11024710
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    ||||||||||||||||||||||| |||||||  ||||| | |||||||||||||||||||||||||||||| ||| || | ||||  | |      ||||    
T  11024889 gttgatttcccaaactattaaacaatccaattgtcgattggatcgtttaatcgacgatttctcaatctattcaacaatccaaaagttttatgtaccgata 11024790  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagat-gattattctaaacctagattcaa 229  Q
    |     |||||||||| |||||  |||||||||||||||||  |||||||||||||  ||||||||||||||||||||||    
T  11024789 ccttgcgtgattatcaaaacatcaatcctatgtctagaattattgttttgatagataaattattctaaacctagattcaa 11024710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 3924069 - 3923887
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   ||     
T  3924069 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttg 3923970  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| ||| |||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  3923969 gatacacaaggtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 3923887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 14287961 - 14288140
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   ||     
T  14287961 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttg 14288060  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagatt 226  Q
    ||||| ||| |||||||||| ||||| ||| | ||||||||||    |||||||||||||| ||||||||||||||||||    
T  14288061 gatacacaaggtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagatt 14288140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 14299146 - 14299325
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   ||     
T  14299146 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttg 14299245  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagatt 226  Q
    ||||| ||| |||||||||| ||||| ||| | ||||||||||    |||||||||||||| ||||||||||||||||||    
T  14299246 gatacacaaggtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagatt 14299325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 36875791 - 36875970
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||| ||| |||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  36875791 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttattgttcaatcgatgatttctcaatctattgaatgataagaaagctttaagtttg 36875890  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagatt 226  Q
    |||||  || |||||||||| ||||| ||| | |||||||||||   |||||||||||||| ||||||||||||||||||    
T  36875891 gatacaaaaggtgattatcaaaacatcgattccatgtctagaatctatgttttgatagatggttattctaaacctagatt 36875970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 8185368 - 8185186
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  8185368 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 8185269  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  8185268 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 8185186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 8192928 - 8192746
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  8192928 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 8192829  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  8192828 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 8192746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 33850619 - 33850437
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | ||| || ||||||| |||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  33850619 aatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaagtttg 33850520  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || |||||||||| |||||  || | |||||||||| |  |||||||||||||||||||| |||||||||||||||    
T  33850519 gatacaaaaggtgattatcaaaacatcaattccatgtctagaacttatgttttgatagatgattattataaacctagattcaa 33850437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 39433153 - 39433335
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | ||| || | || ||||||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  39433153 aatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttttcatttaatcgatgatttctcaatctattgaatgataagaaagctttaagtttg 39433252  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  ||||||||||||| |||||  || | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  39433253 gatacaaaaagtgattatcaaaacatcaattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 39433335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 48347072 - 48346890
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  48347072 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 48346973  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  48346972 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 48346890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 48353456 - 48353274
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  48353456 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 48353357  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  48353356 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 48353274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 229
Target Start/End: Original strand, 19090039 - 19090236
Alignment:
Q  32 tcaatcgtatcgcttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcg 131  Q
    ||||| ||||| || ||| || ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |    
T  19090039 tcaattgtatcactcaattgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataag 19090138  T
Q  132 aaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||| | | |   || ||||| ||| |||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  19090139 aaaactttaggtttggatacacaaggtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 19090236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 9642878 - 9642710
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| |||| || |||||| |||||||||||||||| || |||  | |||| | |   || ||||||||| ||||    
T  9642878 caaactattgaatgattcaagagtcgatcttatcattcaatcgatgatttctcaatctattgaatgataaggaagctttaggtttggatactcaaggtga 9642779  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  9642778 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 9642710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 15914898 - 15915066
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||   ||||| | |   || ||||| ||| ||||    
T  15914898 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataacaaagctttaggtttggatacacaaggtga 15914997  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  15914998 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 15915066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 26602172 - 26602340
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||| ||| ||||    
T  26602172 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatacacaaggtga 26602271  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| ||||| |||||||||||||||    
T  26602272 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattttaaacctagattcaa 26602340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 10861462 - 10861392
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctatt 121  Q
    ||||||||||||||||||||||| |||||||  | ||| | ||||||||||||||||||||||||||||||    
T  10861462 gttgatttcccaaactattaaacaatccaattgttgattggatcgtttaatcgacgatttctcaatctatt 10861392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 21642764 - 21642946
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| ||||||| |||||||| || |||  |||||| | |   ||     
T  21642764 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtacaatcgatgatttctaaatctattgaatgataagaaagctttaggtttg 21642863  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    ||||| |||||||| |||||||||||||||||||||    
T  21642864 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgtttcgatagatggttattctaaacctagattcaa 21642946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 15949419 - 15949587
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||| ||| |||     
T  15949419 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatacacaaggtgg 15949518  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  15949519 ttatccaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 15949587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 45433846 - 45434014
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | ||| || |||| ||||||| | ||||||||||| |||| || |||  |||||| | ||  || |||||  || ||||    
T  45433846 caaactattgaatgattcaagagtcggtcttatcatttaatcaatgatttctcaatttattgaatgataagaaagctttaagtttggatacaaaaggtga 45433945  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| |||||  || | |||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  45433946 ttatcaaaacatcaattccatgtctagaacttatgttttgatagatgattattctaaacctagattcaa 45434014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 8142418 - 8142239
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctatt-aaacgattcgaaagcatgaatcttagat 149  Q
    |||||| || ||||||||| || ||| ||| | |||||| ||||||| ||| || |||||||||||||||| ||| |||  |||||| | |   || |||    
T  8142418 gttgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaattgatgatttctcaatctatttaaatgataagaaagctttaggtttggat 8142319  T
Q  150 actcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| |||||||||| ||| | ||| | ||||||||||    |||||||||||||| |||||||||||||| ||||||    
T  8142318 actcaaggtgattatcaaaacgtcgattccatgtctagaacctatgttttgatagatggttattctaaacctaaattcaa 8142239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 229
Target Start/End: Original strand, 27954340 - 27954514
Alignment:
Q  55 atttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactca 154  Q
    ||||||||||||||||||| |||||||| ||||| | ||||||  || | ||||||| ||| |||||||| ||| | ||||| |  |  |   ||| |||    
T  27954340 atttcccaaactattaaacaatccaatagtcgattgcatcgttatattgtcgatttcccaaactattaaatgatacaaaagctttgagttccaatattca 27954439  T
Q  155 aagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||||||||||||| |  || | ||||||| ||||   |||||| ||||| |||||||||| |||||||||||    
T  27954440 aagtgattatcagaacctaaattccatgtctacaattaaagttttgctagattattattctaaccctagattcaa 27954514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 22854035 - 22854000
Alignment:
Q  194 tgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||||||||||||||||||||||||||||||||||    
T  22854035 tgttttgatagatgattattctaaacctagattcaa 22854000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 128
Target Start/End: Complemental strand, 8881322 - 8881284
Alignment:
Q  90 gtatcgtttaatcgacgatttctcaatctattaaacgat 128  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  8881322 gtatcgtttaatcgaagatttctcaatctattaaacgat 8881284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 20404026 - 20403980
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    |||||||||||||||||||||||||||||||| ||||| | ||||||    
T  20404026 gttgatttcccaaactattaaacgatccaatagtcgattgcatcgtt 20403980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 41542714 - 41542764
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  41542714 aatcgttgatttcccaaactactaaacgatccactagtcgattgtatcgtt 41542764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 29032503 - 29032572
Alignment:
Q  54 gatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaa 123  Q
    |||||||||||||||||||| |||  | | ||||||| ||| ||||||||| |||||||||||| |||||    
T  29032503 gatttcccaaactattaaacaatcacaaagtcgatcggatcatttaatcgatgatttctcaatcaattaa 29032572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 28442700 - 28442750
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||||||||||||||||| | ||||||||| || ||||| ||||||||    
T  28442700 aatcgttgatttcccaaactactgaacgatccactagtcgattgtatcgtt 28442750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 43364504 - 43364542
Alignment:
Q  55 atttcccaaactattaaacgatccaatattcgatcgtat 93  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  43364504 atttcccaaactattaaacgatccaatagtcgattgtat 43364542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 27951200 - 27951277
Alignment:
Q  152 tcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||||||||| ||||||| |  || | ||||||||||||   |||||| ||||| |||||||||| |||||||||||    
T  27951200 tcaaagtgattctcagaacctaaattccatgtctagaattaaagttttgttagattattattctaaccctagattcaa 27951277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 37522044 - 37522096
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    |||||||| ||||||||||||||||||||  ||||||| || || ||||||||    
T  37522044 ttaatcgtcgatttcccaaactattaaactttccaatagtcaattgtatcgtt 37522096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 48455631 - 48455683
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    |||||||| ||||||||||||||||||||  ||| ||| ||||| ||||||||    
T  48455631 ttaatcgtcgatttcccaaactattaaactttccgatagtcgattgtatcgtt 48455683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 8e-70; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 32 - 229
Target Start/End: Original strand, 13163050 - 13163247
Alignment:
Q  32 tcaatcgtatcgcttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcg 131  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||  |    
T  13163050 tcaattgtatcgtttaatcgttgatttcccaaactattaaacgatccaacattcgatcgtatcgtttaatcgacgatttctcactctattaaacgatctg 13163149  T
Q  132 aaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||| |||||| ||||||||||||| |||||||||| ||| |  |||| |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  13163150 aaaccatgaagcttagatactcaaggtgattatcaaaacgtaaatcccatgtctagaattcctgttttgataaatgattattctagacctagattcaa 13163247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 32 - 230
Target Start/End: Complemental strand, 11909941 - 11909743
Alignment:
Q  32 tcaatcgtatcgcttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcg 131  Q
    ||||| || ||| |||||| |||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  11909941 tcaattgtctcgtttaatcattgatttctcaaactaccaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcagtctattaaacgattca 11909842  T
Q  132 aaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaag 230  Q
    ||||||||||  ||||||||   |||||||||||| |||||  || ||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  11909841 aaagcatgaagtttagatacaagaagtgattatcaaaacatcaattctatgtctaaaattcatgttttgatagatgattattctaaacctagattcaag 11909743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 36842038 - 36842216
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||  ||||||   |   |  ||||    
T  36842038 gttgatttcccaaactattaaacaatccaataatcgatcgtatcgtttaatcgacgatttctcaatctattcaacgatctgaaagctctacgttccgata 36842137  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |     |||||||||| |||||  ||||||||||||||||   ||||||||||||||| ||||||||||||||||||||    
T  36842138 ccttgtgtgattatcaaaacatcaatcctatgtctagaatcattgttttgatagatgaatattctaaacctagattcaa 36842216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 229
Target Start/End: Complemental strand, 17789085 - 17788885
Alignment:
Q  29 agttcaatcgtatcgcttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgat 128  Q
    |||||||| |||| | ||||| ||||||||| ||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  17789085 agttcaattgtattgtttaattgttgatttctcaaactattaagcaatccaatagtcgatcgtatcgtttaatcgacgatttctcaatctatcaaacgat 17788986  T
Q  129 tcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattca 228  Q
     ||||||| | ||  |  || | |    |||||||||| |||||  ||||||||||||||||   | ||||||||||| | |||||||||||||||||||    
T  17788985 ccgaaagctttaagttctgacaatttgtgtgattatcaaaacatcaatcctatgtctagaatcatttttttgatagataaatattctaaacctagattca 17788886  T
Q  229 a 229  Q
    |    
T  17788885 a 17788885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 34834774 - 34834606
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| |||||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  34834774 caaactattgaacgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 34834675  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  34834674 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 34834606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 34841218 - 34841050
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| |||||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  34841218 caaactattgaacgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 34841119  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  34841118 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 34841050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 41455856 - 41456035
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    ||||| ||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||| |||||| ||||||| | |      ||||    
T  41455856 gttgaattcccaaactattaaacaatccaattgtcgatcggatcgtttaatcgacgatttctcaatctattcaacgatccgaaagctttatgtactgata 41455955  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagat-gattattctaaacctagattcaa 229  Q
    |     |||||||||| |||||  |||||||||||||||||  |||||||||||||  | ||||||||||||||||||||    
T  41455956 ccttgtgtgattatcaaaacatcaatcctatgtctagaattattgttttgatagataaactattctaaacctagattcaa 41456035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 2157872 - 2158040
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  2157872 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 2157971  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  2157972 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 2158040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 2164288 - 2164456
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  2164288 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 2164387  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  2164388 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 2164456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 21331970 - 21331788
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||||||| || ||||||||| || ||| ||| | ||| || |||| ||||||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  21331970 aatcgttgatgtctcaaactattgaatgattcaagagtcggtcttatcatttaatcgatgatttctcaatctattgaatgataagaaagctttaagtttg 21331871  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || ||||||||||||||||  || | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  21331870 gatacaaaaggtgattatcagaacatcaattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 21331788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 42931348 - 42931166
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   ||     
T  42931348 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttg 42931249  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  42931248 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 42931166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 12951056 - 12951224
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  12951056 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 12951155  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||| ||||| |||||||||||||||||||||    
T  12951156 ttatcaaaacatcgattccatgtctagaaactatgttttgacagatggttattctaaacctagattcaa 12951224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 36782146 - 36781978
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||||||| ||||    
T  36782146 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatactcaaggtga 36782047  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  36782046 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 36781978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 15852796 - 15852978
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||  || |||  |||||| | |   ||     
T  15852796 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctatagaatgataagaaagctttaggtttg 15852895  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  15852896 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 15852978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 229
Target Start/End: Complemental strand, 37439469 - 37439327
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtcta 186  Q
    |||||||| ||||||| |||||||||||||||||||||||||  |||||| | ||  |  ||||||  | |||||||||| |||||  ||||||||||||    
T  37439469 atcgtatcatttaatcaacgatttctcaatctattaaacgatctgaaagctttaagatccgatactttatgtgattatcaaaacatcaatcctatgtcta 37439370  T
Q  187 gaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||   ||||||||||||| | ||||||||| ||||||||||    
T  37439369 gaatcattgttttgatagataaatattctaaaactagattcaa 37439327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 43268119 - 43268287
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||| ||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  43268119 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttttcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 43268218  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| | ||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  43268219 ttatcaaagcatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 43268287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 21341858 - 21341720
Alignment:
Q  91 tatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaat 190  Q
    |||| ||||||||| |||||||||||||||| || |||  |||||| | ||  || |||||  || ||||||||||||||||  || | ||||||||||     
T  21341858 tatcatttaatcgatgatttctcaatctattgaatgataagaaagctttaagtttggatacaaaaggtgattatcagaacatcaattccatgtctagaac 21341759  T
Q  191 tcctgttttgatagatgattattctaaacctagattcaa 229  Q
       ||||||||||||||||||||||||||||||||||||    
T  21341758 ctatgttttgatagatgattattctaaacctagattcaa 21341720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 229
Target Start/End: Complemental strand, 24852962 - 24852820
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtcta 186  Q
    ||||||||||||||||||| ||||||||||||||||||||||  || ||||  |   |  ||||||    |||||||||  ||||   ||||||||||||    
T  24852962 atcgtatcgtttaatcgacaatttctcaatctattaaacgatctgatagcaatacgttctgatactttgtgtgattatctaaacaccaatcctatgtcta 24852863  T
Q  187 gaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||| | |||||||||||||||||||||||| |||||||||||    
T  24852862 gaatccttgttttgatagatgattattctaaccctagattcaa 24852820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 229
Target Start/End: Complemental strand, 28144924 - 28144779
Alignment:
Q  84 tcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgt 183  Q
    |||||||||||||||||| ||||||||||||||||||||||||||  |||||| | ||  |  ||||||    ||||||| || ||||   ||| |||||    
T  28144924 tcgatcgtatcgtttaattgacgatttctcaatctattaaacgatctgaaagctttaagttccgatactttgtgtgattaccaaaacaccaatcttatgt 28144825  T
Q  184 ctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||||   ||||||||||||||| |||||||||| |||||||||    
T  28144824 ctagaatcattgttttgatagatgaatattctaaacttagattcaa 28144779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 16817292 - 16817124
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||| | ||| ||||    
T  16817292 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatgcacaaggtga 16817193  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  16817192 ttatcaaaacatcgattccatgtctagaaccaatgttttgatagatggttattctaaacctagattcaa 16817124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 16856449 - 16856281
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||| | ||| ||||    
T  16856449 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatgcacaaggtga 16856350  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  16856349 ttatcaaaacatcgattccatgtctagaaccaatgttttgatagatggttattctaaacctagattcaa 16856281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 45012229 - 45012411
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  45012229 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 45012328  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  45012329 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 45012411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 29485241 - 29485323
Alignment:
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  29485241 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 29485323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 2021410 - 2021242
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||  | |   || ||||| ||| ||||    
T  2021410 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagttttaggtttggatacacaaggtga 2021311  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| |||   ||||||||||    |||||||||||||| ||||||||||| |||||||||    
T  2021310 ttatcaaaacatcgatttcatgtctagaacctatgttttgatagatggttattctaaacttagattcaa 2021242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 34745137 - 34745085
Alignment:
Q  177 cctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||||||||    
T  34745137 cctatgtctagaattcaagttttgatagatgattattataaacctagattcaa 34745085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 13901929 - 13901750
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctatt-aaacgattcgaaagcatgaatcttagat 149  Q
    |||||| || ||||||||| || ||| ||| | |||||| ||||||| ||| || |||||||||||||||| ||| |||  |||||| | |   || |||    
T  13901929 gttgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaattgatgatttctcaatctatttaaatgataagaaagctttaggtttggat 13901830  T
Q  150 actcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||  || |||||||||| ||| | ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  13901829 acctaaggtgattatcaaaacgtcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 13901750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 21067930 - 21067751
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaa-gcatgaatcttagat 149  Q
    |||||| || ||||||||| || ||| ||| |  ||||| ||||||| |||||| |||||||||||||||| || |||   ||| || | |   || |||    
T  21067930 gttgatgtctcaaactattgaatgattcaagagacgatcttatcgttcaatcgatgatttctcaatctattgaatgataaaaaaagctttaggtttggat 21067831  T
Q  150 actcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    || ||| |||||||||| ||||| ||| | ||||||||||    ||||||||| |||| |||||||||||||||||||||    
T  21067830 acacaaggtgattatcaaaacatcgattccatgtctagaacctatgttttgatcgatggttattctaaacctagattcaa 21067751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 44611497 - 44611547
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  44611497 aatcgttgatttcccaaactactaaacgatccactagtcgattgtatcgtt 44611547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 33034004 - 33034054
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||||||||||||||||| |||||||| || || ||||| ||||||||    
T  33034004 aatcgttgatttcccaaactactaaacgattcactagtcgattgtatcgtt 33034054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 32 - 227
Target Start/End: Original strand, 47646901 - 47647097
Alignment:
Q  32 tcaatcgtatcgcttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcg 131  Q
    |||||||| ||| ||||||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||| ||| |||||||||||||  |    
T  47646901 tcaatcgtgtcgtttaatcgttgatttctcaatctattaaacgatccaatattcagtcgtatcgtttaatcgacgatttttcagtctattaaacgatctg 47647000  T
Q  132 aaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaa-ttcctgttttgatagatgattattctaaacctagattc 227  Q
    |||||||||| |||||||||||||||||||||||| |||||  |||| |||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  47647001 aaagcatgaagcttagatactcaaagtgattatcaaaacatcaatcccatgtctagaatttcatgttttgatagatgattattctaaacctagattc 47647097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 46 - 229
Target Start/End: Original strand, 23251597 - 23251780
Alignment:
Q  46 taatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctt 145  Q
    ||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || ||| ||||||| | ||  |     
T  23251597 taatctttgatttcccaaactattaaacaatccaatagtcgatcgtatcgtttaatcgacgatttctcaatctattcaatgatccgaaagctttaagttc 23251696  T
Q  146 agatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
     ||||||    |||||||||| |||||  ||||||||||||||||   ||||||||||||||| ||||||||||||||||||||    
T  23251697 cgatactttgtgtgattatcaaaacatcaatcctatgtctagaatcattgttttgatagatgaatattctaaacctagattcaa 23251780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 45620120 - 45619938
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||||||||||||| |||||||||| |||||||| || || ||||||||||||| ||||||||||||||||||||||||| ||||||| | ||  |      
T  45620120 aatcgttgatttcccagactattaaacaatccaatagtccattgtatcgtttaatcaacgatttctcaatctattaaacgatccgaaagctttaagttcc 45620021  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||||    |||||||||| ||||| |||||||||||||||||   ||||||||||||||| |||| |||||||| ||||||    
T  45620020 gatactttgtgtgattatcaaaacattgatcctatgtctagaatcattgttttgatagatgaatattttaaacctatattcaa 45619938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 229
Target Start/End: Original strand, 31473544 - 31473687
Alignment:
Q  86 gatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtct 185  Q
    ||||||||| | ||||||||||||||||||||||||||||||| ||| | ||| || ||| |||||| || |||||||||| ||||   |||||||||||    
T  31473544 gatcgtatcctgtaatcgacgatttctcaatctattaaacgatccgatatcattaagctttgatacttaaggtgattatcaaaacactaatcctatgtct 31473643  T
Q  186 agaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||||| |||||||||||||||||||||||| |||||||||||    
T  31473644 agaattcttgttttgatagatgattattctaaccctagattcaa 31473687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 45 - 229
Target Start/End: Original strand, 13432093 - 13432277
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatct 144  Q
    ||||| ||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | ||  |    
T  13432093 ttaattgttgatttctcaaactaataaacaatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgatctgaaagctttaagtt 13432192  T
Q  145 tagatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
      ||||||    |||||||||| |||||   |||||||||||||||   |||||| |||||| | |||||| |||||||||||||    
T  13432193 ccgatactttgtgtgattatcaaaacattagtcctatgtctagaatcattgtttttatagataaatattcttaacctagattcaa 13432277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 13249004 - 13249144
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtcta 186  Q
    ||||||||||||||||||||||||||||||||||||||||||   | ||||| || ||| |||||| || |||||||||| |||||  ||||  ||||||    
T  13249004 atcgtatcgtttaatcgacgatttctcaatctattaaacgatctaatagcattaagcttcgatacttaaggtgattatcaaaacattaatcc--tgtcta 13249101  T
Q  187 gaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| |||||||||||||||||||||||| |||||||||||    
T  13249102 gaattcttgttttgatagatgattattctaaccctagattcaa 13249144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 38672749 - 38672570
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||||||| ||||||||||||||||||| |||||| ||||||| | |      ||||    
T  38672749 gttgatttcccaaactattaaacaatccaattgtcgatcgtatcgtttaattgacgatttctcaatctattcaacgatccgaaagctttatgtaccgata 38672650  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatg-attattctaaacctagattcaa 229  Q
    |     |||||||||| |||||  |||||||||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  38672649 ccttgtgtgattatcaaaacatcaatcctatgtctagaattattgttttgatagatgaattattctaaacctagattcaa 38672570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 5357719 - 5357541
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    ||||||||||||||||||||||| || ||||| |||| ||||||||||||||||| ||||||||||||||| |||||| ||||||| | ||  |   |||    
T  5357719 gttgatttcccaaactattaaacaattcaatagtcgaccgtatcgtttaatcgacaatttctcaatctattcaacgatccgaaagctttaagttccaata 5357620  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||    |||||||||| |||||  ||||||||||||||||   ||||||||||||||| |||||||||||| |||||||    
T  5357619 ctttgtgtgattatcaaaacatcaatcctatgtctagaatcattgttttgatagatgaatattctaaacctggattcaa 5357541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 6238915 - 6239083
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| |||||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  6238915 caaactattgaacgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 6239014  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  6239015 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 6239083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 39806307 - 39806486
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    |||||||||||||||||| |||| |||||||  |||||| ||||||||||| ||||||||||||||| ||| |||||| ||||||| | |      ||||    
T  39806307 gttgatttcccaaactatcaaacaatccaattgtcgatcatatcgtttaatagacgatttctcaatccattcaacgatccgaaagctttatgtactgata 39806406  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagat-gattattctaaacctagattcaa 229  Q
    |     |||||||||| ||||| ||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||    
T  39806407 ccttgtgtgattatcaaaacatcgatcctatgtctagaattattgttttgatagataaattattctaaacctagattcaa 39806486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 45016041 - 45016209
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  45016041 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 45016140  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  45016141 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 45016209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 28413645 - 28413466
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    ||||||||||||||||||||||| |||||||  || |||  |||||||||||||||||||||||||||||| |||||| ||||||| | |       |||    
T  28413645 gttgatttcccaaactattaaacaatccaattgtcaatcagatcgtttaatcgacgatttctcaatctattcaacgatccgaaagctttatgtaccaata 28413546  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagat-gattattctaaacctagattcaa 229  Q
    |     |||||||||| |||||  |||||||||||||||||  |||||||||||||  ||||||||||||||||||||||    
T  28413545 ccttgtgtgattatcaaaacatcaatcctatgtctagaattattgttttgatagataaattattctaaacctagattcaa 28413466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 30660127 - 30660269
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtcta 186  Q
    |||||||| ||||||| ||||||||| |||||||||||||||  || | ||| || ||| |||||| || |||||||||| ||||   ||||||||| ||    
T  30660127 atcgtatcttttaatcaacgatttcttaatctattaaacgatctgatatcattaagcttcgatacttaaggtgattatcaaaacactaatcctatgtgta 30660226  T
Q  187 gaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||||| | |||||||||||||| |||||||||||    
T  30660227 gaattcttgttttggttgatgattattctaaccctagattcaa 30660269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 41297777 - 41297945
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||||||| ||||    
T  41297777 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatactcaaggtga 41297876  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  41297877 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 41297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 42092156 - 42092324
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  42092156 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 42092255  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||| ||||| |||||||||||||||||||||    
T  42092256 ttatcaaaacatcgattccatgtctagaaactatgttttgacagatggttattctaaacctagattcaa 42092324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 43686889 - 43687057
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||||||| ||||    
T  43686889 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatactcaaggtga 43686988  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  43686989 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 43687057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 2824791 - 2824613
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    |||||||||||| |||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||||| |||||| ||||||| | |      ||||    
T  2824791 gttgatttcccagactattaaacaatccaattgtcgatcggatcgtt-aatcgacgatttctcaatctattcaacgatccgaaagctttatgtaccgata 2824693  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagat-gattattctaaacctagattcaa 229  Q
    |     |||||||||| |||||  |||||||||||||||||  |||||||||||||  ||||| ||||||||||||||||    
T  2824692 ccttgtgtgattatcaaaacatcaatcctatgtctagaattattgttttgatagataaattatcctaaacctagattcaa 2824613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 44916584 - 44916766
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||||||| | ||| || |||| ||||||||| |||||||||||||||| ||||||  |||| | | ||  ||     
T  44916584 aatcgtcgatgtctcaaactattgaatgatccaagagtcggtcttatcatttaatcgatgatttctcaatctattgaacgataagaaaactttaagtttg 44916683  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || |||||||||| |||||  || | || ||||||| |  ||||||||||||||||||||||||||||||||||||    
T  44916684 gatacaaaaggtgattatcaaaacatcaattccatatctagaacttatgttttgatagatgattattctaaacctagattcaa 44916766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 32797969 - 32798151
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||||||| || ||||||||| || ||| ||| | ||| || |||| ||||||||| |||||||||||||||  || |||  |||| | | ||  ||     
T  32797969 aatcgttgatgtctcaaactattgaatgattcaagagtcggtcttatcatttaatcgatgatttctcaatctatcgaatgataagaaaactttaagtttg 32798068  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || |||||||||| |||||  || | |||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  32798069 gatacaaaatgtgattatcaaaacatcaattccatgtctagaacttatgttttgatagatgattattctaaacctagattcaa 32798151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 44241647 - 44241785
Alignment:
Q  91 tatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaat 190  Q
    |||| ||||||||| |||||||||||||||| || |||  |||||| | ||  || |||||  ||||||||||||| |||||  ||   |||||||||||    
T  44241647 tatcatttaatcgatgatttctcaatctattgaatgataagaaagctttaagtttggatacaaaaagtgattatcaaaacatcaatttcatgtctagaat 44241746  T
Q  191 tcctgttttgatagatgattattctaaacctagattcaa 229  Q
       ||||||||||||||||||||||||||||||||||||    
T  44241747 ctatgttttgatagatgattattctaaacctagattcaa 44241785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 1115944 - 1115776
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | ||| || ||||||| |||||| |||||||||||||||| || |||   ||||| | ||  || |||||  || ||||    
T  1115944 caaactattgaatgattcaagagtcggtcttatcgttcaatcgatgatttctcaatctattgaatgataataaagctttaagtttggatacaaaaggtga 1115845  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| |||||  || | |||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  1115844 ttatcaaaacatcaattccatgtctagaacttatgttttgatagatgattattctaaacctagattcaa 1115776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 23762298 - 23762130
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||| ||||||||    
T  23762298 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatacacaaagtga 23762199  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| || ||  || | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  23762198 ttatcaaaaaatcaattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 23762130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 29001991 - 29002159
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| ||  ||  |||||| | |   || ||||| ||| ||||    
T  29001991 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaataataagaaagctttaggtttggatacacaaggtga 29002090  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  29002091 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 29002159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 229
Target Start/End: Original strand, 35085295 - 35085434
Alignment:
Q  90 gtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaa 189  Q
    ||||| ||||||||| |||||||||| ||||| || |||  |||||| | ||  || |||||  ||||||||||||| |||||  || | ||||||||||    
T  35085295 gtatcatttaatcgatgatttctcaacctattgaatgataagaaagctttaagtttggatacaaaaagtgattatcaaaacatcaattccatgtctagaa 35085394  T
Q  190 ttcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |   |||||||||||||||||||||||| |||||||||||    
T  35085395 tctatgttttgatagatgattattctaagcctagattcaa 35085434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 41305444 - 41305313
Alignment:
Q  98 taatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaattcctgtt 197  Q
    ||||||| |||||||||||||||| || |||  |||||| | ||  || |||||  || |||||||||| ||||| ||| | ||||||||||    ||||    
T  41305444 taatcgatgatttctcaatctattgaatgataagaaagctttaagtttggatacaaaaggtgattatcaaaacatcgattccatgtctagaacctatgtt 41305345  T
Q  198 ttgatagatgattattctaaacctagattcaa 229  Q
    ||||||||||||||||||||||||||||||||    
T  41305344 ttgatagatgattattctaaacctagattcaa 41305313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 26621716 - 26621898
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | ||| || |||| ||||||||| |||||||||||||||| || |||  |||| | | ||  ||     
T  26621716 aatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcatttaatcgatgatttctcaatctattgaatgataagaaaactttaagtttg 26621815  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || |||||||||| |||||  || | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  26621816 gatacaaaaggtgattatcaaaacatcaattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 26621898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 39053314 - 39053132
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  39053314 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 39053215  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  39053214 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 39053132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 39059686 - 39059504
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  39059686 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 39059587  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  39059586 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 39059504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 9869365 - 9869533
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | ||| || |||| |||||| || ||||||||||||||||||| |||  |||||| | |   || |||||  || ||||    
T  9869365 caaactattgaatgattcaagagtcggtcttatcatttaattgatgatttctcaatctattaaatgataagaaagctttaggtttggatacaaaaggtga 9869464  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| |||||  || | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  9869465 ttatcaaaacatcaattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 9869533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 11913224 - 11913056
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||||||| | ||| || |||| |||||| || ||||||||| |||||| || |||  |||||| | ||  || |||||  || ||||    
T  11913224 caaactattgaatgatccaagagtcggtcttatcatttaattgaagatttctcagtctattgaatgataagaaagctttaagttttgatacaaaaggtga 11913125  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| |||||  || | |||||||||| |  ||||||||||||||||||||||||||||| ||||||    
T  11913124 ttatcaaaacataaattccatgtctagaacttatgttttgatagatgattattctaaacctaaattcaa 11913056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 226
Target Start/End: Complemental strand, 7063602 - 7063465
Alignment:
Q  90 gtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaa--tcttagatactcaaagtgattatcagaacatggatcctatgtctag 187  Q
    ||||||||||||||||||||||||||||||||||||||| | | ||||| ||  |||| |||| | ||||||||| ||| ||| |  | |||||||||||    
T  7063602 gtatcgtttaatcgacgatttctcaatctattaaacgatccaatagcattaagttctt-gatatttaaagtgattgtcaaaacttaaaccctatgtctag 7063504  T
Q  188 aattcctgttttgatagatgattattctaaacctagatt 226  Q
    |||    ||||||||| |||||||| |||| ||||||||    
T  7063503 aataaaagttttgataaatgattatactaaccctagatt 7063465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 1174866 - 1175034
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | ||| || ||||| | |||||| |||||||||||||||| || |||  |||||| | |   || ||||| ||| ||||    
T  1174866 caaactattgaatgattcaagagtcggtcttatcgctcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatacacaaggtga 1174965  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| | ||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  1174966 ttatcaaatcatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 1175034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 21815064 - 21815112
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtat 93  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  21815064 ttaatcgttgatttcctaaactattaaacgatccaatagtcgattgtat 21815112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 28996371 - 28996443
Alignment:
Q  157 gtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  28996371 gtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 28996443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 4599775 - 4599957
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | ||| || |||| ||||||| | |||||||||||||||| ||  ||  |||||| | ||  ||     
T  4599775 aatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcatttaatcaatgatttctcaatctattgaatcataagaaagctttaagtttg 4599874  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  |||||||||| || |||||  || | ||||||| ||    |||||||||||||||||||||||||||| |||||||    
T  4599875 gatacaaaaagtgattaccaaaacatcaattccatgtctataacctatgttttgatagatgattattctaaaccttgattcaa 4599957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 6847843 - 6847885
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgatt 129  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  6847843 atcgtatcgtttaatcgatgatttctcaatctattaaaggatt 6847885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 226
Target Start/End: Original strand, 31072623 - 31072743
Alignment:
Q  106 gatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgataga 205  Q
    |||||||||||||||| || |||  |||||| | ||  || |||||  || |||||||||| |||||  || | |||||||||| |  |||||| |||||    
T  31072623 gatttctcaatctattgaatgataagaaagctttaagtttggatacaaaaggtgattatcaaaacatcaattccatgtctagaacttatgttttcataga 31072722  T
Q  206 tgattattctaaacctagatt 226  Q
    |||||||||||||||| ||||    
T  31072723 tgattattctaaaccttgatt 31072743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 9316216 - 9316259
Alignment:
Q  54 gatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||||||||||||||||||||||||| ||||| | ||||||    
T  9316216 gatttcccaaactattaaacgatccaatagtcgattgcatcgtt 9316259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 39456704 - 39456667
Alignment:
Q  91 tatcgtttaatcgacgatttctcaatctattaaacgat 128  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  39456704 tatcgtctaatcgacgttttctcaatctattaaacgat 39456667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 9269087 - 9269016
Alignment:
Q  55 atttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacga 127  Q
    |||| |||||||||||||| ||| || |  |||| | |||||||||||||||||||| ||||| |||||||||    
T  9269087 attttccaaactattaaacaatcaaa-agccgattggatcgtttaatcgacgatttcccaatcaattaaacga 9269016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 32 - 230
Target Start/End: Original strand, 2785936 - 2786135
Alignment:
Q  32 tcaatcgtatcgcttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcg 131  Q
    ||||| |||||| ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||    
T  2785936 tcaattgtatcgtttaatcgttgatttctcaaactactaaacgatccaatattcggtcgtatcgtttaatcgacgatttctccatcgattaaacgatccg 2786035  T
Q  132 aaagcatgaatcttag-atactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaag 230  Q
    |||||||||| ||| | ||||  || ||||||||||||||||  |||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||    
T  2786036 aaagcatgaagctttgaatacaaaaggtgattatcagaacatcaatcctatgtccagaattcatgttttgatagatgatgattctaaacctagattcaag 2786135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 49 - 229
Target Start/End: Complemental strand, 20952728 - 20952548
Alignment:
Q  49 tcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttaga 148  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||| ||||||| | ||  |  ||    
T  20952728 tcgttgatttcccaaactattaaacaatccaatagtcgatcgtatcgtttaatcgacgatttcttaatctattcaacgatccgaaagctttaagttccga 20952629  T
Q  149 tactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||    |||||||||| |||||  ||||||||||||||||   ||||||||||| | | ||||||||||||||||||||    
T  20952628 tactttgtgtgattatcaaaacatcaatcctatgtctagaatcattgttttgataggtcaatattctaaacctagattcaa 20952548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 9331114 - 9330932
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||| | ||         
T  9331114 aatcgttgatttcccaaactattaagcaatccaatagtcgatcgtatcgtttaatcgacgatttctccatctattaaacgatctgaaagctttaagtccc 9331015  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||||    |||||||||| ||||| ||| | ||||||||||    ||||||||||||||| |||||||||| |||||||||    
T  9331014 gatactttgtgtgattatcaaaacattgattccatgtctagaaccattgttttgatagatgaatattctaaacatagattcaa 9330932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 6036512 - 6036694
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   ||     
T  6036512 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttg 6036611  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  6036612 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 6036694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 32746616 - 32746798
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   ||     
T  32746616 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttg 32746715  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  32746716 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 32746798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 9570524 - 9570341
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | ||| || |||| ||||||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  9570524 aatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcatttaatcgatgatttctcaatctattgaatgataagaaagcgttaaatttg 9570425  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaat-tcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  ||  ||||||||| ||||| ||| | ||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  9570424 gatacaaaagatgattatcaaaacatcgattccatgtctagaatctcttgttttgatagatgattattctaaacctagattcaa 9570341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 9577026 - 9576843
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | ||| || |||| ||||||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  9577026 aatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcatttaatcgatgatttctcaatctattgaatgataagaaagcgttaaatttg 9576927  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaat-tcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || |||||||||| ||||| ||| | ||||||||||| || ||||||||||||||||||||||||||| ||||||||    
T  9576926 gatacaaaaggtgattatcaaaacatcgattccatgtctagaatctcttgttttgatagatgattattctaaaccaagattcaa 9576843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 24179320 - 24179502
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||| ||||||| || |||  |||||| | |   ||     
T  24179320 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcgatctattgaatgataagaaagctttaggtttg 24179419  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  24179420 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 24179502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 4311448 - 4311280
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||| ||| ||||    
T  4311448 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatacacaaggtga 4311349  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  4311348 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 4311280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 23068724 - 23068892
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||| ||| ||||    
T  23068724 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatacacaaggtga 23068823  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  23068824 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 23068892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 230
Target Start/End: Complemental strand, 20651101 - 20650918
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||||||| | ||| |  |||| ||||||||| |||||||||||||||| || |||  ||| || | ||  ||     
T  20651101 aatcgtcgatgtctcaaactattgaatgatccaagagtcggttttatcatttaatcgatgatttctcaatctattgaatgataagaaggcgttaagtttg 20651002  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaag 230  Q
    |||||  || |||||||||| |||||  || | ||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  20651001 gatacaaaaggtgattatcaaaacattaattccatgtctagaattcatgttgtgatagaggattattctaaacctagattcaag 20650918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 24705101 - 24705239
Alignment:
Q  91 tatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaat 190  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| | ||  |  ||||||    |||||||||| |||||  | | ||||||||||||    
T  24705101 tatcgtttaatcgacgatttctcaatctattaaacgatctgaaagctttaagttccgatactttgtgtgattatcaaaacatcaaccttatgtctagaat 24705200  T
Q  191 tcctgttttgatagatgattattctaaacctagattcaa 229  Q
       ||||||||||||||| |||||||||| |||||||||    
T  24705201 cattgttttgatagatgaatattctaaacttagattcaa 24705239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 27501943 - 27501761
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  27501943 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 27501844  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  27501843 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 27501761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 229
Target Start/End: Complemental strand, 461365 - 461223
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta-gatactcaaagtgattatcagaacatggatcctatgtct 185  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||| ||||   || ||| |||||     |||||||||| ||||   |||||||||||    
T  461365 atcgtatcgtttaatcgacgatttctcgatctattaaacgatccgatagca-atatgttatgatacattgtgtgattatcaaaacacaaatcctatgtct 461267  T
Q  186 agaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||   | |||||||||||||||||||||| |||||||||||    
T  461266 agaatctttattttgatagatgattattctaaccctagattcaa 461223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 10941236 - 10941098
Alignment:
Q  91 tatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaat 190  Q
    |||| ||||||||| |||||||||||||||| || |||  |||||| | ||  || |||||  || |||||||||| |||||  || | || |||||||     
T  10941236 tatcatttaatcgatgatttctcaatctattgaatgataagaaagctttaagtttggatacaaaaggtgattatcaaaacatcaattccatatctagaac 10941137  T
Q  191 tcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |  ||||||||||||||||||||||||||||||||||||    
T  10941136 ttatgttttgatagatgattattctaaacctagattcaa 10941098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 43931823 - 43932005
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | ||| || |||| ||||||||| |||||  ||||||||| || |||  |||||| | ||  ||     
T  43931823 aatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcatttaatcgatgatttgccaatctattgaatgataagaaagctttaagtttg 43931922  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || |||||||||| |||||  || | |||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  43931923 gatacaaaaggtgattatcaaaacatcaattccatgtctagaacttatgttttgatagatgattattctaaacctagattcaa 43932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 17735630 - 17735771
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtcta 186  Q
    ||||||||||||||||||||||||||||||||||||||||||  || ||| | ||     |||||     |||||||||| |||||  |  |||||||||    
T  17735630 atcgtatcgtttaatcgacgatttctcaatctattaaacgatctgatagctttaagtactgataccttgtgtgattatcaaaacatcaacgctatgtcta 17735729  T
Q  187 gaattcctgttttgatagatgattattctaaacctagattca 228  Q
    ||||   ||||||||||||||| |||||||||||||||||||    
T  17735730 gaatcattgttttgatagatgaatattctaaacctagattca 17735771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 19036899 - 19037040
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtcta 186  Q
    ||||||||||||||||||||||||||||||||||||||||||  || ||| | ||     |||||     |||||||||| |||||  |  |||||||||    
T  19036899 atcgtatcgtttaatcgacgatttctcaatctattaaacgatctgatagctttaagtactgataccttgtgtgattatcaaaacatcaacgctatgtcta 19036998  T
Q  187 gaattcctgttttgatagatgattattctaaacctagattca 228  Q
    ||||   ||||||||||||||| |||||||||||||||||||    
T  19036999 gaatcattgttttgatagatgaatattctaaacctagattca 19037040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 4591045 - 4591224
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagc---atgaatcttag 147  Q
    ||||||||| |||||| || ||| |||||||  ||||||| || |||||||||| |||||||||||||||| |||||| |||||||   ||| | |   |    
T  4591045 gttgatttctcaaactgttgaacaatccaattatcgatcggatagtttaatcgatgatttctcaatctattcaacgatccgaaagctatatgtacc---g 4591141  T
Q  148 atactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatga-ttattctaaacctagattcaa 229  Q
    ||||     |||||||||| | |||  |||||||||||||||||  || |||||||||| | |||||||||||||||||||||    
T  4591142 ataccttgtgtgattatcaaagcatcaatcctatgtctagaattattgctttgatagataatttattctaaacctagattcaa 4591224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 229
Target Start/End: Original strand, 47441092 - 47441229
Alignment:
Q  92 atcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaatt 191  Q
    ||||||||||||| |||||||||||||||| || |||  |||||  | ||  || |||||  || |||||||||| |||||  ||   |||||||||| |    
T  47441092 atcgtttaatcgatgatttctcaatctattgaatgataagaaagttttaagtttggatacaaaaggtgattatcaaaacatcaatttcatgtctagaact 47441191  T
Q  192 cctgttttgatagatgattattctaaacctagattcaa 229  Q
      |||||||||||| |||||||||||||||||||||||    
T  47441192 tatgttttgatagaggattattctaaacctagattcaa 47441229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 25692263 - 25692409
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtcta 186  Q
    |||||||||||||||||| ||||||||||||| ||||| |||  |||||| | ||  |  ||||||    |||||||||| |||||  | ||||||||||    
T  25692263 atcgtatcgtttaatcgatgatttctcaatcttttaaaagatctgaaagctttaagttcggatactttgtgtgattatcaaaacatcaaccctatgtcta 25692362  T
Q  187 gaat--tcc--tgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||  | |  ||||||||||||||| ||||||||||||||||||||    
T  25692363 gaatcatgcattgttttgatagatgaatattctaaacctagattcaa 25692409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 43995324 - 43995505
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||||||| | ||| || |||| ||||||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  43995324 aatcgtcgatgtctcaaactattgaatgatccaagagtcggtcttatcatttaatcgatgatttctcaatctattgaatgataagaaagctttaagtttg 43995423  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || || ||||||| |||||  ||   ||||| |||| |  |||||||||||||||||||||||||| |||||||||    
T  43995424 gatacaaaaggt-attatcaaaacatcaatttcatgtccagaacttatgttttgatagatgattattctaaacatagattcaa 43995505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 130
Target Start/End: Original strand, 17404862 - 17404905
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgattc 130  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  17404862 atcgtatcgtttaataaacgatttctcaatctattaaacgattc 17404905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 27900775 - 27900818
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgat 88  Q
    |||||||| ||||||||||||||||||||||||||||| |||||    
T  27900775 ttaatcgtcgatttcccaaactattaaacgatccaatagtcgat 27900818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 4675180 - 4675230
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  4675180 aatcgttgatttcccaaactactaaacgatccactagtcgattgtatcgtt 4675230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 25893482 - 25893624
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  25893482 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaagtttg 25893581  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaa 189  Q
    |||||  || |||||||||| ||||| ||| | ||||||||||    
T  25893582 gatacaaaaggtgattatcaaaacatcgattccatgtctagaa 25893624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 31095667 - 31095622
Alignment:
Q  83 ttcgatcgtatcgtttaatcgacgatttctcaatctattaaacgat 128  Q
    ||||||||||  |||||||||||||||| |||||||||||||||||    
T  31095667 ttcgatcgtactgtttaatcgacgatttttcaatctattaaacgat 31095622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 23194375 - 23194315
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttc 111  Q
    ||||||||||||||||||||||| ||   | | ||||||| ||||||||||||||||||||    
T  23194375 gttgatttcccaaactattaaacaattgcaaagtcgatcggatcgtttaatcgacgatttc 23194315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 546108 - 546147
Alignment:
Q  83 ttcgatcgtatcgtttaatcgacgatttctcaatctatta 122  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  546108 ttcgatcgtatcggttaatcgacgatttctcagtctatta 546147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 4501364 - 4501415
Alignment:
Q  46 taatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||| ||||||||||||||||||||  ||||||| ||||| ||||||||    
T  4501364 taatcgtcgatttcccaaactattaaactttccaatagtcgattgtatcgtt 4501415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 4506690 - 4506741
Alignment:
Q  46 taatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||| ||||||||||||||||||||  ||||||| ||||| ||||||||    
T  4506690 taatcgtcgatttcccaaactattaaactttccaatagtcgattgtatcgtt 4506741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 27104444 - 27104377
Alignment:
Q  54 gatttcccaaactatt-aaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctat 120  Q
    |||||||||||||||| ||||||||  | | ||||| | ||| |||||||||||||||||||||||||    
T  27104444 gatttcccaaactatttaaacgatcacaaagtcgattggatcatttaatcgacgatttctcaatctat 27104377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 41354142 - 41354107
Alignment:
Q  194 tgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||||||||||| |||||||||||||||||||||    
T  41354142 tgttttgatagatggttattctaaacctagattcaa 41354107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 13015232 - 13015306
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctatt 121  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||    
T  13015232 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctatt 13015306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 6e-52; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 79 - 230
Target Start/End: Complemental strand, 49359259 - 49359108
Alignment:
Q  79 aatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcc 178  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||   ||||| |||| |||| |||| |||||||||||||| |||||  ||||    
T  49359259 aatattcgatcgtatcgtttaatcgacgatttctcagtctattaaacgatctaaaagcgtgaagcttatatacacaaagtgattatcaaaacataaatcc 49359160  T
Q  179 tatgtctagaattcctgttttgatagatgattattctaaacctagattcaag 230  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  49359159 tatgtctagatttcctgttttgatagatgattattctaaacctagattcaag 49359108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 41373247 - 41373415
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |  ||| ||||||||| ||||    
T  41373247 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggcttggatactcaaggtga 41373346  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  41373347 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 41373415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 55462748 - 55462566
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||||||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   ||     
T  55462748 aatcgttgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttg 55462649  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  55462648 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 55462566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 136
Target Start/End: Complemental strand, 13003778 - 13003693
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagc 136  Q
    ||||||||| ||||||||||||| |||||||  |||||||||||||||||| ||||||||||||||||||| |||||| |||||||    
T  13003778 gttgatttctcaaactattaaacaatccaattgtcgatcgtatcgtttaattgacgatttctcaatctattcaacgatccgaaagc 13003693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 2948095 - 2948274
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    ||||||||| |||||| || ||| |||||||  ||||||| || ||||||||||||||||||||||||||| |||||| ||||||| | |      ||||    
T  2948095 gttgatttctcaaactgttgaacaatccaattatcgatcggatagtttaatcgacgatttctcaatctattcaacgatccgaaagctttatgtaccgata 2948194  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatga-ttattctaaacctagattcaa 229  Q
    |     |||||||||| |||||  |||||||||||||||||  ||||||||||||| | |||||||||||||||||||||    
T  2948195 ccttgtgtgattatcaaaacatcaatcctatgtctagaattattgttttgatagataatttattctaaacctagattcaa 2948274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 230
Target Start/End: Complemental strand, 5660525 - 5660342
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||||||| | ||  || |||| ||||||||| ||||||||||||||||||| | |  |||||| | ||  ||     
T  5660525 aatcgtcgatgtctcaaactattgaatgatccaagagtcagtcttatcatttaatcgatgatttctcaatctattaaatgctaagaaagcgttaagtttg 5660426  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaag 230  Q
    |||||  || |||||||||| |||||  || | ||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  5660425 gatacaaaaggtgattatcaaaacatcaattccatgtctagaattcatgttgtgatagatgattattttaaacctagattcaag 5660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 36754767 - 36754585
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||||||| | ||| || |||| || |||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  36754767 aatcgtcgatgtctcaaactattgaatgatccaagagtcggtcttatcattcaatcgatgatttctcaatctattgaatgataagaaagctttaagtttg 36754668  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || |||||||||| |||||  || | |||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  36754667 gatacaaaaggtgattatcaaaacatcaattccatgtctagaacttatgttttgatagatgattattctaaacctagattcaa 36754585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 8104141 - 8104309
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||  || |||  |||||| | |   || ||||| ||||||||    
T  8104141 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctatagaatgataagaaagctttaggtttggatacacaaagtga 8104240  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  8104241 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 8104309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 16405606 - 16405774
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | ||| || |||| ||||||||| |||||||||||||||| || |||  |||||| | ||  || |||||  |||||||    
T  16405606 caaactattgaatgattcaagagtcggtcttatcatttaatcgatgatttctcaatctattgaatgataagaaagctttaagtttggatacaaaaagtga 16405705  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| | |||  || | |||||||||||   ||||||||||||||||||||||||||||||||||||    
T  16405706 ttatcaaatcatcaattccatgtctagaatctatgttttgatagatgattattctaaacctagattcaa 16405774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 17457101 - 17457283
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  17457101 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 17457200  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  17457201 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 17457283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 27590551 - 27590733
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || |||  |||||| | |   ||     
T  27590551 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgataagaaagctttaggtttg 27590650  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  27590651 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 27590733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 37368291 - 37368109
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||| ||||||| || |||  |||||| | |   ||     
T  37368291 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcgatctattgaatgataagaaagctttaggtttg 37368192  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| ||| |||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  37368191 gatacacaaggtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 37368109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 13594368 - 13594536
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || |||  |||||| | |   || ||||| ||||||||    
T  13594368 caaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgataagaaagctttaggtttggatacacaaagtga 13594467  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  13594468 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 13594536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 12097406 - 12097545
Alignment:
Q  91 tatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta-gatactcaaagtgattatcagaacatggatcctatgtctagaa 189  Q
    |||||||||||| ||||||||||||||||||||||||| | | ||||| ||  | | |||| ||||||||||||||| ||| |  | |||||||||||||    
T  12097406 tatcgtttaatccacgatttctcaatctattaaacgatccaatagcattaagttcatgatattcaaagtgattatcaaaacctacaccctatgtctagaa 12097505  T
Q  190 ttcctgttttgatagatgattattctaaacctagattcaa 229  Q
      |  | ||||||| ||||||||||||| |||||||||||    
T  12097506 aacaagctttgatatatgattattctaaccctagattcaa 12097545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 16838335 - 16838153
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || || ||||||||| ||| ||| | ||| || ||||||| |||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  16838335 aatcgtcgatgtctcagactattaaatgattcaagagtcggtcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaagtttg 16838236  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||   ||||||||||||| |||||  || | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  16838235 gataaaaaaagtgattatcaaaacatcaattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 16838153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 30211512 - 30211330
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | ||| || |||| ||||||||  |||||||||||||||| || |||  |||||| | ||  ||     
T  30211512 aatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcatttaatcggtgatttctcaatctattgaatgataagaaagctttaagtttg 30211413  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  ||||||||||||| |||||  ||   || ||||||| |  ||||||||||||||||||||||||||||||||||||    
T  30211412 gatacaaaaagtgattatcaaaacatccatttcatatctagaacttatgttttgatagatgattattctaaacctagattcaa 30211330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 229
Target Start/End: Complemental strand, 52183103 - 52182961
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtcta 186  Q
    ||||||||||||||| |||||||||||||||||| | |||||  |||||| | ||  || ||||||    |||||||||| |||||  ||  ||||||||    
T  52183103 atcgtatcgtttaattgacgatttctcaatctatcatacgatctgaaagctttaagatttgatactttgtgtgattatcaaaacatcaattttatgtcta 52183004  T
Q  187 gaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||   ||||||||||||||| |||| |||||||||||||||    
T  52183003 gaatcattgttttgatagatgaatattttaaacctagattcaa 52182961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 37356225 - 37356143
Alignment:
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  37356225 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 37356143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 30238585 - 30238657
Alignment:
Q  157 gtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||||||| |||||  || | |||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  30238585 gtgattatcaaaacattcattccatgtctagaatctctgttttgatagatggttattctaaacctagattcaa 30238657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 40976611 - 40976529
Alignment:
Q  46 taatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgat 128  Q
    ||||||| ||||||||||||||||||||  ||||||| ||||| ||||||||  || |  |||||||||| ||||||||||||    
T  40976611 taatcgtcgatttcccaaactattaaactttccaatagtcgattgtatcgttatatagttgatttctcaaactattaaacgat 40976529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 125
Target Start/End: Complemental strand, 6640399 - 6640361
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaac 125  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  6640399 atcgtatcgtttaatcgacgatgtctcaatctattaaac 6640361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 53895831 - 53895758
Alignment:
Q  54 gatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacga 127  Q
    |||||||||||||||||||| |||  | | ||||| | |||||||||| ||||||||| ||| |||||||||||    
T  53895831 gatttcccaaactattaaacaatcacaaagtcgattggatcgtttaatagacgatttcccaacctattaaacga 53895758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 8895297 - 8895241
Alignment:
Q  24 tcatcagttcaatcgtatcgcttaatcgttgatttcccaaactattaaacgatccaa 80  Q
    |||| ||||||||||||||  ||||||| ||||||| ||| ||||||||||||||||    
T  8895297 tcatgagttcaatcgtatcatttaatcgatgatttctcaacctattaaacgatccaa 8895241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 26373338 - 26373410
Alignment:
Q  52 ttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaa 124  Q
    ||||||||||||||  ||||||||||  | | ||||| | |||||||||||||||||||||||| | ||||||    
T  26373338 ttgatttcccaaacgtttaaacgatcacaaagtcgattggatcgtttaatcgacgatttctcaaccgattaaa 26373410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 667647 - 667596
Alignment:
Q  46 taatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||||||||||||||||||||||||  ||||||| |||||  |||||||    
T  667647 taatcgttgatttcccaaactattaaactttccaatagtcgattatatcgtt 667596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 8895286 - 8895235
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcat 138  Q
    |||||||| ||||||||| |||||||||| |||||||||||| | |||||||    
T  8895286 atcgtatcatttaatcgatgatttctcaacctattaaacgatccaaaagcat 8895235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 23543519 - 23543436
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgat 128  Q
    |||||||| ||||||||||| ||||||||  ||||||| ||||| ||||||||  || |  |||||| ||| ||||||||||||    
T  23543519 ttaatcgtcgatttcccaaaatattaaactttccaatagtcgattgtatcgttgtatagttgatttcccaaactattaaacgat 23543436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 13003672 - 13003623
Alignment:
Q  157 gtgattatcagaacatggatcctatgtctagaattcctgttttgatagat 206  Q
    |||||||||| |||||  |||||||||||||||||  |||||||||||||    
T  13003672 gtgattatcaaaacatcaatcctatgtctagaattattgttttgatagat 13003623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 6e-43; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 45 - 229
Target Start/End: Complemental strand, 30580168 - 30579984
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatct 144  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| |||  |||||| | ||  |    
T  30580168 ttaatcgttgatttcccaaactattaaacaatccaatatttgatcgtatcgtttaatcgatgatttctcaatctattaaatgatatgaaagctttaagtt 30580069  T
Q  145 tagatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    | ||||||    |||||||||| |||||  ||||||||||||||||   ||||||||||||| | ||||||||||| ||||||||    
T  30580068 tcgatactttgtgtgattatcaaaacatcaatcctatgtctagaatcattgttttgatagataaatattctaaacccagattcaa 30579984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 3413266 - 3413084
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaa-tctt 145  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||| |||||||||||||| ||||||| | || || |    
T  3413266 aatcgttgatttcccaaactattaaacaatccaatagccgatcgtatcgtttaatcgacgatttctccatctattaaacgatccgaaagctttaagtcct 3413167  T
Q  146 agatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
     ||||||    ||||||| || ||||| ||| | ||||||||||    ||||||||||||||| |||| ||||| |||||||||    
T  3413166 -gatactttgtgtgattaccaaaacattgattccatgtctagaaccattgttttgatagatgaatattttaaacatagattcaa 3413084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 12918926 - 12918744
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaa-tctt 145  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| ||||||| || ||| ||||||| | || ||||    
T  12918926 aatcgttgatttcccaaactattaaacaatccaattgtcgatcgtatcgtttaatcgacgatttctccatctattgaatgatccgaaagctttaagtctt 12918827  T
Q  146 agatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
     ||||||    |||| ||||| ||||| ||| | ||||||||||    ||||||||||||||| |||||||||| |||||||||    
T  12918826 -gatactttgtgtgactatcaaaacattgattccatgtctagaaccattgttttgatagatgaatattctaaacatagattcaa 12918744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 33794342 - 33794427
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagc 136  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||||||| ||||||||||||||||||| |||||| |||||||    
T  33794342 gttgatttcccaaactattaaacaatccaattgtcgatcgtatcgtttaattgacgatttctcaatctattcaacgatccgaaagc 33794427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 29980719 - 29980887
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  29980719 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 29980818  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  29980819 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 29980887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 30041206 - 30041038
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  30041206 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 30041107  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  30041106 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 30041038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 34357250 - 34357082
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  34357250 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 34357151  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  34357150 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 34357082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 34359041 - 34358873
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  34359041 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 34358942  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  34358941 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 34358873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 42747370 - 42747513
Alignment:
Q  85 cgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtc 184  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| ||| | ||| ||  || |||||| |||  |||||||| ||||   | ||||||||    
T  42747370 cgatcgtattgtttaatcgacgatttctcaatctattaaatgatccgataacattaagtttcgatacttaaaa-gattatcaaaacacaaaccctatgtc 42747468  T
Q  185 tagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||    
T  42747469 tagaattcaagttttgatagatgattattctaaccctagattcaa 42747513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 2156092 - 2155913
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    ||||||||||||||||||||||| |||| ||  ||||||| |||||||||||||| ||||||||||||||| ||||||  |||||| | |      ||||    
T  2156092 gttgatttcccaaactattaaacaatcccattgtcgatcggatcgtttaatcgacaatttctcaatctattcaacgatctgaaagctttatgtaccgata 2155993  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagat-gattattctaaacctagattcaa 229  Q
    |     |||||||||| |||||  |||||||||||||||||  |||||||||||||  ||||| ||||||||||||||||    
T  2155992 ccttgtgtgattatcaaaacatcaatcctatgtctagaattattgttttgatagataaattatcctaaacctagattcaa 2155913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 9843599 - 9843778
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    ||||||||| |||||| || ||| |||||||  ||||||| || ||||||||||||||||||||||||||| |||||| ||||||| | |      ||||    
T  9843599 gttgatttctcaaactgttgaacaatccaattatcgatcggatagtttaatcgacgatttctcaatctattcaacgatccgaaagctttatgtaccgata 9843698  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatga-ttattctaaacctagattcaa 229  Q
    |     |||||||||| |||||  |||||||||||||||||  ||||||||||||| | |||||||||||||||||||||    
T  9843699 ccttgtgtgattatcaaaacatcaatcctatgtctagaattattgttttgatagataatttattctaaacctagattcaa 9843778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 40958593 - 40958411
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||| ||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   ||     
T  40958593 aatcgtcgatgtctcaaaccattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttg 40958494  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  40958493 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 40958411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 29414631 - 29414463
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||| ||| ||||    
T  29414631 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttagggttggatacacaaggtga 29414532  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  29414531 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 29414463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 2958105 - 2958287
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  2958105 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 2958204  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  2958205 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 2958287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 2966574 - 2966756
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  2966574 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 2966673  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  2966674 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 2966756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 12505697 - 12505559
Alignment:
Q  91 tatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaat 190  Q
    |||| ||||||||| |||||||||||||||| || |||  |||||| | ||  || |||||  || |||||||||| |||||  || | |||||||||||    
T  12505697 tatcatttaatcgatgatttctcaatctattgaatgataagaaagctttaagtttggatacaaaaggtgattatcaaaacatcaattccatgtctagaat 12505598  T
Q  191 tcctgttttgatagatgattattctaaacctagattcaa 229  Q
       ||||||||||||||||||||||||||||||||||||    
T  12505597 ctatgttttgatagatgattattctaaacctagattcaa 12505559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 5876478 - 5876646
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||| | | |   || ||||| ||||||||    
T  5876478 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaaactttaggtttggatacacaaagtga 5876577  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||| ||    |||||||||||||| |||||||||||||||||||||    
T  5876578 ttatcaaaacatcgattccatgtctataacctatgttttgatagatggttattctaaacctagattcaa 5876646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 22360224 - 22360392
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||| ||| ||||    
T  22360224 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatacacaaggtga 22360323  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||| ||||||||||||    
T  22360324 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctacacctagattcaa 22360392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 42151079 - 42151247
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || | |  |||||| | |   || ||||| ||| ||||    
T  42151079 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatggtaagaaagctttaggtttggatacacaaggtga 42151178  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  42151179 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 42151247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 25894625 - 25894443
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  25894625 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 25894526  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  25894525 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 25894443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 34738426 - 34738568
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtcta 186  Q
    |||||||||||||||||||||||||||||||||||||||||| | | ||| | ||  |  ||||||  | |||| | ||| ||||   ||||||||||||    
T  34738426 atcgtatcgtttaatcgacgatttctcaatctattaaacgatccaatagcgttaagttccgatactttatgtgaatgtcaaaacaccaatcctatgtcta 34738525  T
Q  187 gaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||   | ||||||||||||| |||||||| |||||||||||    
T  34738526 gaatcatttttttgatagatgaatattctaaccctagattcaa 34738568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 229
Target Start/End: Complemental strand, 19853466 - 19853322
Alignment:
Q  84 tcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgt 183  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||||| | | ||  |  ||||||    |||||||||| |||||  |||||||||    
T  19853466 tcgatcgtatcgtttaatcgatgatttctcaatcaattaaacgatccgaaaactttaagatatgatactttgcgtgattatcaaaacatcaatcctatgt 19853367  T
Q  184 ctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||| ||   ||||| ||||||||| ||||||||| ||||||||||    
T  19853366 ctag-atcattgtttagatagatgaatattctaaagctagattcaa 19853322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 22314090 - 22314258
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| ||||||  ||||||||||||||| || |||  |||||| | |   || ||||| ||| ||||    
T  22314090 caaactattgaatgattcaagagtcgatcttatcgttcaatcgataatttctcaatctattgaatgataagaaagctttaggtttggatacacaaggtga 22314189  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||| ||    |||||||||||||| |||||||||||||||||||||    
T  22314190 ttatcaaaacatcgattccatgtctaaaacctatgttttgatagatggttattctaaacctagattcaa 22314258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 4973809 - 4973991
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | ||| || |||| | ||||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  4973809 aatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcatctaatcgatgatttctcaatctattgaatgataagaaagctttaagtttg 4973908  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || |||||||| | |||||  || | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  4973909 gatacaaaaggtgattattaaaacatcaattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 4973991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 229
Target Start/End: Original strand, 37335430 - 37335576
Alignment:
Q  83 ttcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatg 182  Q
    |||||||||||||||||||| |||||||||||||||||||||||||  || ||||| || ||| |||| | ||||| ||||  | ||| |  | || ||     
T  37335430 ttcgatcgtatcgtttaatcaacgatttctcaatctattaaacgatctgatagcattaagctttgatatttaaagttattactaaaacctaaaccccatt 37335529  T
Q  183 tctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||||||||  ||||  |||||||||||| ||||  ||||||||||    
T  37335530 tctagaattcaagtttcaatagatgattatcctaacgctagattcaa 37335576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 39655745 - 39655818
Alignment:
Q  54 gatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacga 127  Q
    |||||||||||||||||||| |||  | | || |||| |||||| ||||||||||||| |||||||||||||||    
T  39655745 gatttcccaaactattaaacaatcagaaagtcaatcggatcgttcaatcgacgatttcccaatctattaaacga 39655818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 40821301 - 40821251
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  40821301 aatcgttgatttcccaaactactaaacgatccactagtcgattgtatcgtt 40821251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 17346518 - 17346601
Alignment:
Q  83 ttcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatca 166  Q
    ||||||||||| | ||||||||||||||||||| ||||||| | || | | ||||||||   | |||||| |||||||||||||    
T  17346518 ttcgatcgtattgcttaatcgacgatttctcaacctattaagcaatacaatagcatgaaggcttgatacttaaagtgattatca 17346601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 34738423 - 34738473
Alignment:
Q  32 tcaatcgtatcgcttaatcgttgatttcccaaactattaaacgatccaata 82  Q
    |||||||||||| |||||||  |||||| ||| ||||||||||||||||||    
T  34738423 tcaatcgtatcgtttaatcgacgatttctcaatctattaaacgatccaata 34738473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 4694190 - 4694142
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtat 93  Q
    |||||||| ||||||||||||||||||||  ||||||| ||||| ||||    
T  4694190 ttaatcgtcgatttcccaaactattaaactttccaatagtcgattgtat 4694142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 229
Target Start/End: Original strand, 9846765 - 9846949
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatct 144  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||| | ||  |    
T  9846765 ttaatcgttgatttcccaaactattaaacaatccaatattcgatcgtatcgtttaatccacgatttctcaatctattaaacgatctgaaagctttaagtt 9846864  T
Q  145 tagatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
      ||||||    |||||||||| |||||  |||||||||  |||||   ||||||||||||| | |||| |||||||||||||||    
T  9846865 ctgatactttgtgtgattatcaaaacatcaatcctatgttaagaatcattgttttgatagataaatattttaaacctagattcaa 9846949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 83 - 217
Target Start/End: Original strand, 22870522 - 22870656
Alignment:
Q  83 ttcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatg 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||  |||| || ||| |||||| || |||||||||| ||||   ||||||||    
T  22870522 ttcgatcgtatcgtttaatcgacgatttctcaatctattaaacgatatgatggcattaaccttcgatacttaaggtgattatcaaaacactaatcctatg 22870621  T
Q  183 tctagaattcctgttttgatagatgattattctaa 217  Q
    |||||||||| ||||||||||||||||||||||||    
T  22870622 tctagaattcttgttttgatagatgattattctaa 22870656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 10081534 - 10081355
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    ||||||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||||||| |||| |||||| | ||||| | |    | ||||    
T  10081534 gttgatttcccaaactattaaaaaatccaattgtcgatcgtatcgtttaatcgacgatttctcaatatattcaacgatccaaaagctttacgtatcgata 10081435  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatg-attattctaaacctagattcaa 229  Q
    |     |||||||||| |||||  ||||||||||||||||   |||||||||||||| ||||||||||||||||||||||    
T  10081434 ccttgtgtgattatcaaaacatcaatcctatgtctagaatcattgttttgatagatgaattattctaaacctagattcaa 10081355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 230
Target Start/End: Complemental strand, 1167472 - 1167272
Alignment:
Q  31 ttcaatcgtatcgcttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctatt-aaacgatt 129  Q
    |||||| |||||| || ||||||||| || |||||||||||||||||||| | |||||| |||  |||||||||||||||||||||||||| ||| |||     
T  1167472 ttcaattgtatcgttttatcgttgatgtctcaaactattaaacgatccaagagtcgatcttatgatttaatcgacgatttctcaatctattaaaatgata 1167373  T
Q  130 cgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
     |||||| | ||  || |||||  | ||||||||||| |||||  || | || |||||||||  ||||||||||||  ||||||||||||||||| ||||    
T  1167372 agaaagctttaagtttggatacaaagagtgattatcaaaacatcaattccatatctagaatttatgttttgatagactattattctaaacctagaatcaa 1167273  T
Q  230 g 230  Q
    |    
T  1167272 g 1167272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 1428385 - 1428217
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  1428385 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 1428286  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  1428285 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 1428217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 4186931 - 4187113
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||||||| || ||||||||| || ||| ||| | ||| || |||| ||||||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  4186931 aatcgttgatgtctcaaactattgaatgattcaagagtcggtcttatcatttaatcgatgatttctcaatctattgaatgataagaaagctttaagtttg 4187030  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || |||||||||| ||||| ||| | |||||||||||   |||||||||||||| |||||||||||||||||||||    
T  4187031 gatacaaaaggtgattatcaaaacatcgattccatgtctagaatctatgttttgatagatggttattctaaacctagattcaa 4187113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 13671793 - 13671611
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | ||| || |||| ||||||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  13671793 aatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcatttaatcgatgatttctcaatctattgaatgataagaaagctttaagtttg 13671694  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  ||||||||||||| |||||  || | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  13671693 gatacaaaaagtgattatcaaaacatcaattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 13671611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 31548141 - 31548323
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||  || |||  |||||| | |   ||     
T  31548141 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctatagaatgataagaaagctttaggtttg 31548240  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  31548241 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 31548323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 32328455 - 32328287
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||  | |   || ||||||||| ||||    
T  32328455 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaaggtttaggtttggatactcaaggtga 32328356  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| | ||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  32328355 ttatcaaagcatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 32328287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 230
Target Start/End: Complemental strand, 7069678 - 7069495
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || |||  |||||| | |   ||     
T  7069678 aatcgtcgatgtctcaaactattgaatgattcaacagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgataagaaagctttaggtttg 7069579  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaag 230  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| ||||||||||||||||||||||    
T  7069578 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaag 7069495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 7062492 - 7062310
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || |||  |||||| | |   ||     
T  7062492 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgataagaaagctttaggtttg 7062393  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  7062392 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 7062310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 9518155 - 9518228
Alignment:
Q  54 gatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacga 127  Q
    |||||||||||||||||||| |||  | | ||||||| ||||||||||||||||||||||||||||||||||||    
T  9518155 gatttcccaaactattaaacaatcacaaagtcgatcggatcgtttaatcgacgatttctcaatctattaaacga 9518228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 4738299 - 4738117
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||  ||||||| || |||  |||||| | |   ||     
T  4738299 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttcttgatctattgaatgataagaaagctttaggtttg 4738200  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  4738199 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 4738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 9864736 - 9864554
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||| || || |||  |||||| | ||  ||     
T  9864736 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctgttgaatgataagaaagctttaagtttg 9864637  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || |||||||||| ||||| ||| | ||||||||||    |||||||| | |||||||||||||||||||||||||    
T  9864636 gatacaaaaggtgattatcaaaacatcgattccatgtctagaacctatgttttgagatatgattattctaaacctagattcaa 9864554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 27670340 - 27670522
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | ||| || |||| ||||||||| |||||||||||| ||| || |||  |||||| | ||  ||     
T  27670340 aatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcatttaatcgatgatttctcaatcaattgaatgataagaaagctttaagtttg 27670439  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || |||||||||| |||||  || | ||||||||||  | |||||||||||||||||||||||||| |||||||||    
T  27670440 gatacaaaaggtgattatcaaaacatcaattccatgtctagaacccatgttttgatagatgattattctaaacttagattcaa 27670522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 34649046 - 34649228
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  34649046 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 34649145  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  34649146 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 34649228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 34655497 - 34655679
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  34655497 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 34655596  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  34655597 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 34655679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 34711519 - 34711351
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||| | |||||||||||| ||| || |||  |||||| | |   || ||||||||| ||||    
T  34711519 caaactattgaatgattcaagagtcgatcttatcgttcaatcaatgatttctcaatccattgaatgataagaaagctttaggtttggatactcaaggtga 34711420  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| | ||| ||| | |||||||||||   || ||||||||||| |||||||||||||||||||||    
T  34711419 ttatcaaagcatcgattccatgtctagaatctatgctttgatagatggttattctaaacctagattcaa 34711351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 4020211 - 4020029
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  4020211 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 4020112  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| || ||||||||||||||||||    
T  4020111 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggtttttctaaacctagattcaa 4020029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 4026637 - 4026455
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||  |||||| |||||||| ||||||| || | |  |||||| | |   ||     
T  4026637 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgtccaatcgatgatttctcgatctattgaatgctaagaaagctttaggtttg 4026538  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| || ||||||||||||||||||    
T  4026537 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggtttttctaaacctagattcaa 4026455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 125
Target Start/End: Original strand, 11015492 - 11015533
Alignment:
Q  84 tcgatcgtatcgtttaatcgacgatttctcaatctattaaac 125  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  11015492 tcgatcgtatcgtttaatcgacgatttctcaatctattaaac 11015533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 229
Target Start/End: Original strand, 29907103 - 29907287
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatct 144  Q
    |||||||| ||| || ||||||||| || ||| ||| | ||| || ||||||| |||  | |||||||||||||||| || |||  |||||| | ||  |    
T  29907103 ttaatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcgttcaataaatgatttctcaatctattgaatgataagaaagctttaagtt 29907202  T
Q  145 tagatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    | |||||  || |||||||||| |||||  || | |||||||||| |  ||||||||||||||||||||||||||  ||||||||    
T  29907203 tggatacaaaaggtgattatcaaaacatcaattccatgtctagaacttatgttttgatagatgattattctaaacagagattcaa 29907287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 229
Target Start/End: Complemental strand, 30117277 - 30117093
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatct 144  Q
    |||||||| ||| || ||||||||| || ||| ||| | ||| || ||||||| |||  | |||||||||||||||| || |||  |||||| | ||  |    
T  30117277 ttaatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcgttcaataaatgatttctcaatctattgaatgataagaaagctttaagtt 30117178  T
Q  145 tagatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    | |||||  || |||||||||| |||||  || | |||||||||| |  ||||||||||||||||||||||||||  ||||||||    
T  30117177 tggatacaaaaggtgattatcaaaacatcaattccatgtctagaacttatgttttgatagatgattattctaaacagagattcaa 30117093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 9949001 - 9949039
Alignment:
Q  90 gtatcgtttaatcgacgatttctcaatctattaaacgat 128  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9949001 gtatcgtttaatcgacgatttctcaatctattaaacgat 9949039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 21631598 - 21631563
Alignment:
Q  92 atcgtttaatcgacgatttctcaatctattaaacga 127  Q
    ||||||||||||||||||||||||||||||||||||    
T  21631598 atcgtttaatcgacgatttctcaatctattaaacga 21631563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 7826242 - 7826292
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  7826242 aatcgttgatttcccaaactactaaacgatccactagtcgattgtatcgtt 7826292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 10800544 - 10800494
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  10800544 aatcgttgatttcccaaactactaaacgatccactagtcgattgtatcgtt 10800494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 10807255 - 10807205
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  10807255 aatcgttgatttcccaaactactaaacgatccactagtcgattgtatcgtt 10807205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 14118531 - 14118481
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  14118531 aatcgttgatttcccaaactactaaacgatccactagtcgattgtatcgtt 14118481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 14122489 - 14122439
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  14122489 aatcgttgatttcccaaactactaaacgatccactagtcgattgtatcgtt 14122439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 24908675 - 24908725
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  24908675 aatcgttgatttcccaaactactaaacgatccactagtcgattgtatcgtt 24908725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 25541518 - 25541477
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgat 128  Q
    |||||||||||| ||| |||||||||||||||||||||||||    
T  25541518 atcgtatcgttttatcaacgatttctcaatctattaaacgat 25541477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 26604760 - 26604719
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgat 128  Q
    |||| |||||||||||||||||||| ||||||||||||||||    
T  26604760 atcggatcgtttaatcgacgatttcccaatctattaaacgat 26604719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 11016444 - 11016516
Alignment:
Q  157 gtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||||||| |||||  | |||||||||| |||   |||||||||||||||  |||||||||||||||||||    
T  11016444 gtgattatcaaaacatcaaccctatgtctaaaatcattgttttgatagatgaaaattctaaacctagattcaa 11016516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 18765934 - 18765982
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtat 93  Q
    |||||||| |||||||||||||||||||||||| |||| ||||| ||||    
T  18765934 ttaatcgtcgatttcccaaactattaaacgatctaatagtcgattgtat 18765982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 21262440 - 21262368
Alignment:
Q  157 gtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||||||| |||||  || | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  21262440 gtgattatcaaaacatcaattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 21262368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 123
Target Start/End: Original strand, 18750427 - 18750461
Alignment:
Q  89 cgtatcgtttaatcgacgatttctcaatctattaa 123  Q
    ||||||||||||||||| |||||||||||||||||    
T  18750427 cgtatcgtttaatcgactatttctcaatctattaa 18750461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 26604771 - 26604713
Alignment:
Q  24 tcatcagttcaatcgtatcgcttaatcgttgatttcccaaactattaaacgatccaata 82  Q
    |||| |||||||||| |||| |||||||  |||||||||| ||||||||||||| ||||    
T  26604771 tcatgagttcaatcggatcgtttaatcgacgatttcccaatctattaaacgatcaaata 26604713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 11058112 - 11058052
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctatt 121  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||    
T  11058112 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctatt 11058052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 29337004 - 29336871
Alignment:
Q  83 ttcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatga-atcttagatactcaaagtgattatcagaacatggatcctat 181  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| | || || ||||||   ||||||||||| || |   |||||||    
T  29337004 ttcgatcgtattgtttaatcgacgatttctaaatctattaaacgattcgatagcattagatatt-gatactttgagtgattatcaaaatacaaatcctat 29336906  T
Q  182 gtctagaattcctgttttgatagatgattattcta 216  Q
    ||||||||||| |||||||||||||||||||||||    
T  29336905 gtctagaattcttgttttgatagatgattattcta 29336871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 24220247 - 24220166
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgat 128  Q
    ||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||||| ||||||||||||||    
T  24220247 aatcgttgatttcccaaactattaaacaatccaatagtcgattgtatcgtttaatcgaggatttctccatctattaaacgat 24220166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 6464538 - 6464370
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  6464538 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 6464439  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  6464438 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 6464370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 7311609 - 7311777
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  7311609 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 7311708  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  7311709 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 7311777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 36076227 - 36076395
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  36076227 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 36076326  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  36076327 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 36076395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 8013282 - 8013114
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  8013282 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 8013183  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||| ||||| |||||||||||||||||||||    
T  8013182 ttatcaaaacatcgattccatgtctagaaactatgttttgacagatggttattctaaacctagattcaa 8013114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 36005444 - 36005276
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  36005444 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 36005345  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||| ||||||||    
T  36005344 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaaccaagattcaa 36005276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 36021761 - 36021593
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  36021761 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 36021662  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| | ||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  36021661 ttatcaaagcatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 36021593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 7933898 - 7933719
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagata 150  Q
    ||||||||| |||||| || ||| |||||||  ||||||| || ||||||||||||||||||||||||||| |||||| ||||||| | |      ||||    
T  7933898 gttgatttctcaaactgttgaacaatccaattatcgatcggatagtttaatcgacgatttctcaatctattcaacgatccgaaagctttatgtaccgata 7933799  T
Q  151 ctcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatga-ttattctaaacctagattcaa 229  Q
    |     |||||||||| |||||  |||||||||||||||||  ||||||||||||| | |||||||||||||||||||||    
T  7933798 ccttgtgtgattatcaaaacatcaatcctatgtctagaattattgttttgatagataatttattctaaacctagattcaa 7933719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 11358169 - 11357987
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||| ||||||| || |||  |||||| | |   ||     
T  11358169 aatcgtcgatgtctcaaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcgatctattgaatgataagaaagctttaggtttg 11358070  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  11358069 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 11357987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 16710630 - 16710462
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||| ||| ||||    
T  16710630 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatacacaaggtga 16710531  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  16710530 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 16710462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 45068378 - 45068210
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | ||| || |||| ||||||||| |||||||||||||||| || |||  |||||| | ||  || |||||  || ||||    
T  45068378 caaactattgaatgattcaagagtcggtcttatcatttaatcgatgatttctcaatctattgaatgataagaaagctttaagtttggatacaaaaggtga 45068279  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| |||||  || | |||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  45068278 ttatcaaaacatcaattcaatgtctagaacttatgttttgatagatgattattctaaacctagattcaa 45068210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 1238474 - 1238642
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| ||| || |||||||||||||||| || |||  |||||| | |   || ||||| ||| ||||    
T  1238474 caaactattgaatgattcaagagtcgatcttatcgttcaatagatgatttctcaatctattgaatgataagaaagctttaggtttggatacacaaggtga 1238573  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  1238574 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 1238642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 15012634 - 15012816
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | ||| || |||| |||||| || ||||||| |||||||| || |||  |||||| | ||  ||     
T  15012634 aatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcatttaattgatgatttcttaatctattgaatgataagaaagctttaagtttg 15012733  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  ||||||||||||| |||||  || | |||| ||||| |  ||||||||||||||||||||||||||||||||||||    
T  15012734 gatacaaaaagtgattatcaaaacatcaattccatgtttagaacttatgttttgatagatgattattctaaacctagattcaa 15012816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 26250567 - 26250385
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||||||| || ||||||||| || ||| ||| | ||| || |||| ||||||||| ||||| |||||||||| || |||  |||||| |  |  ||     
T  26250567 aatcgttgatgtctcaaactattgaatgattcaagagtcggtcttatcatttaatcgatgatttttcaatctattgaatgataagaaagcttttagtttg 26250468  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || |||||||| | |||||  || | |||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  26250467 gatacaaaaggtgattattaaaacatcaattccatgtctagaacttatgttttgatagatgattattctaaacctagattcaa 26250385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 36425606 - 36425524
Alignment:
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    ||||| |||||||||||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  36425606 gatacacaaagtgattatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 36425524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 229
Target Start/End: Original strand, 14393990 - 14394126
Alignment:
Q  93 tcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtgattatcagaacatggatcctatgtctagaattc 192  Q
    |||||| ||||||||||||||||||||| |||| ||  |||||| | ||  |  ||||||    |||||||||| ||| |  |||||||||| |||||      
T  14393990 tcgtttgatcgacgatttctcaatctatcaaacaatctgaaagccttaagatctgatactttgtgtgattatcaaaaccttaatcctatgtcaagaatca 14394089  T
Q  193 ctgttttgatagatgattattctaaacctagattcaa 229  Q
     ||||||||||||||| ||||||| ||||||||||||    
T  14394090 ttgttttgatagatgaatattctacacctagattcaa 14394126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 1607706 - 1607665
Alignment:
Q  87 atcgtatcgtttaatcgacgatttctcaatctattaaacgat 128  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  1607706 atcgaatcgtttaatcgacgatgtctcaatctattaaacgat 1607665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 2268328 - 2268276
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    |||||||| ||||||||||||||||||||  ||||||| ||||| ||||||||    
T  2268328 ttaatcgtcgatttcccaaactattaaactttccaatagtcgattgtatcgtt 2268276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 17993319 - 17993263
Alignment:
Q  54 gatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgattt 110  Q
    |||||||||||||||||||| |||  | | ||||||| |||||||||||||||||||    
T  17993319 gatttcccaaactattaaacaatcgcaaagtcgatcggatcgtttaatcgacgattt 17993263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 44245882 - 44245831
Alignment:
Q  46 taatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    ||||||| ||||||||||||||||||||  ||||||| ||||| ||||||||    
T  44245882 taatcgtcgatttcccaaactattaaactttccaatagtcgattgtatcgtt 44245831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 4861660 - 4861730
Alignment:
Q  54 gatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaa 124  Q
    |||||||||||||||||||| |||  | | ||||||| ||| |||||||||||||||| ||| | ||||||    
T  4861660 gatttcccaaactattaaacaatcgcaaagtcgatcggatcatttaatcgacgatttcccaaccgattaaa 4861730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 5063979 - 5063927
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtt 97  Q
    |||||||| |||||||||||||||||||   ||||||| ||||| ||||||||    
T  5063979 ttaatcgtcgatttcccaaactattaaattttccaatagtcgattgtatcgtt 5063927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 24220138 - 24220066
Alignment:
Q  157 gtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||||||| ||||| |||   ||||||||||    ||||||||||||||| |||||||||| |||||||||    
T  24220138 gtgattatcaaaacattgatttcatgtctagaaccattgttttgatagatgaatattctaaacatagattcaa 24220066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 41242078 - 41242018
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctatt 121  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||    
T  41242078 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctatt 41242018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 4967 - 4799
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| ||||||||||||||||||| |||  |||||| | |   || ||||||||| ||||    
T  4967 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattaaatgataagaaagctttaggtttggatactcaaggtga 4868  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  4867 ttatcaaaacatcgattccatgtctagaaactatgttttgatagatggttattctaaacctagattcaa 4799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 136
Target Start/End: Complemental strand, 24237 - 24152
Alignment:
Q  51 gttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagc 136  Q
    ||||||||| ||||||||||||| |||||||  |||||||||||||||||| ||||||||||||||||||| |||||| |||||||    
T  24237 gttgatttctcaaactattaaacaatccaattgtcgatcgtatcgtttaattgacgatttctcaatctattcaacgatccgaaagc 24152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 24131 - 24082
Alignment:
Q  157 gtgattatcagaacatggatcctatgtctagaattcctgttttgatagat 206  Q
    |||||||||| |||||  |||||||||||||||||  |||||||||||||    
T  24131 gtgattatcaaaacatcaatcctatgtctagaattattgttttgatagat 24082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 8843 - 8675
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||||||| ||||    
T  8843 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatactcaaggtga 8744  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  8743 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 8675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 2536 - 2354
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | ||| || |||| | ||||| | |||||||||||||||| || |||  |||||| | ||  ||     
T  2536 aatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcatctaatcaatgatttctcaatctattgaatgataagaaagctttaagtttg 2437  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || |||||||||| ||||| ||| | |||| |||||    ||||||||||||||||||||||||||||||||||||    
T  2436 gatacaaaaggtgattatcaaaacatcgattccatgtttagaacctatgttttgatagatgattattctaaacctagattcaa 2354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 15417 - 15599
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||||||| || || |||||| || ||| ||| | ||| || |||| ||||||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  15417 aatcgttgatgtctcacactattgaatgattcaagaatcggtcttatcatttaatcgatgatttctcaatctattgaatgataagaaagctttaagtttg 15516  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  || |||||||||| |||||  || | |||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  15517 gatacaaaaggtgattatcaaaacatcaattcaatgtctagaacttatgttttgatagatgattattctaaacctagattcaa 15599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 5963 - 5905
Alignment:
Q  24 tcatcagttcaatcgtatcgcttaatcgttgatttcccaaactattaaacgatccaata 82  Q
    |||| ||||||||||||||  ||||||| |||||| | || ||||||||||||||||||    
T  5963 tcataagttcaatcgtatcatttaatcgatgatttgctaatctattaaacgatccaata 5905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 49950 - 50118
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||| ||| ||||    
T  49950 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatacacaaggtga 50049  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| ||||| ||| | ||||||||||    |||||||||||||| |||||||||||||||||||||    
T  50050 ttatcaaaacatcgattccatgtctagaacctatgttttgatagatggttattctaaacctagattcaa 50118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 2891 - 3073
Alignment:
Q  47 aatcgttgatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatctta 146  Q
    |||||| ||| || ||||||||| || ||| ||| | ||| || |||| || |||||| |||||||||||||||| || |||  |||||| | ||  ||     
T  2891 aatcgtcgatgtctcaaactattgaatgattcaagagtcggtcttatcattaaatcgatgatttctcaatctattgaatgataagaaagctttaagtttg 2990  T
Q  147 gatactcaaagtgattatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||  ||||||||||||| |||||  || | ||||||||||    ||||||||||||||||||||||||||||||||||||    
T  2991 gatacaaaaagtgattatcaaaacatcaattccatgtctagaacctatgttttgatagatgattattctaaacctagattcaa 3073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0936 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0936
Description:

Target: scaffold0936; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 3226 - 3058
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | ||| || || |||| |||||| |||||||||||||||| |  |||  |||||| | ||  || ||||| |||  |||    
T  3226 caaactattgaatgattcaagagtcggtcttaccgttcaatcgatgatttctcaatctattgattgataagaaagctttaagtttggatacacaagatga 3127  T
Q  161 ttatcagaacatggatcctatgtctagaattcctgttttgatagatgattattctaaacctagattcaa 229  Q
    |||||| |||||| || | |||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  3126 ttatcaaaacatgaattccatgtctagaacttatgttttgatagatgattattctaaacctagattcaa 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 14638 - 14554
Alignment:
Q  54 gatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcat 138  Q
    |||||||||||||||||||| |||  | | ||||| | |||||||||||||||||||  |||||||||||||||| | |||||||    
T  14638 gatttcccaaactattaaacaatcacaaagtcgattggatcgtttaatcgacgattttccaatctattaaacgatccaaaagcat 14554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 189
Target Start/End: Original strand, 12193 - 12321
Alignment:
Q  61 caaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcatgaatcttagatactcaaagtga 160  Q
    ||||||||| || ||| ||| | |||||| ||||||| |||||| |||||||||||||||| || |||  |||||| | |   || ||||||||| ||||    
T  12193 caaactattgaatgattcaagagtcgatcttatcgttcaatcgatgatttctcaatctattgaatgataagaaagctttaggtttggatactcaaggtga 12292  T
Q  161 ttatcagaacatggatcctatgtctagaa 189  Q
    |||||| ||||| ||| | ||||||||||    
T  12293 ttatcaaaacatcgattccatgtctagaa 12321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 17745 - 17697
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtat 93  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  17745 ttaatcgttgatttcctaaactattaaacgatccaatagtcgattgtat 17697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 138
Target Start/End: Original strand, 16181 - 16266
Alignment:
Q  54 gatttcccaaactatt-aaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaacgattcgaaagcat 138  Q
    |||||||||||||||| ||||||||  | | ||||| | ||||||||||||| |||||| ||||||||||| |||| | |||||||    
T  16181 gatttcccaaactatttaaacgatcacaaagtcgattggatcgtttaatcgatgatttcccaatctattaatcgatccaaaagcat 16266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 1684 - 1636
Alignment:
Q  45 ttaatcgttgatttcccaaactattaaacgatccaatattcgatcgtat 93  Q
    |||||| | ||||||||||||||||||||||||||||| ||||| ||||    
T  1684 ttaatcatcgatttcccaaactattaaacgatccaatagtcgattgtat 1636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 35032 - 35102
Alignment:
Q  54 gatttcccaaactattaaacgatccaatattcgatcgtatcgtttaatcgacgatttctcaatctattaaa 124  Q
    |||||||||||||||||||  |||  | | ||||||| |||||||||||||||||||| ||| | ||||||    
T  35032 gatttcccaaactattaaataatcacaaagtcgatcggatcgtttaatcgacgatttcccaaccgattaaa 35102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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