View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1320_low_71 (Length: 259)

Name: NF1320_low_71
Description: NF1320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1320_low_71
NF1320_low_71
[»] chr2 (29 HSPs)
chr2 (13-252)||(13163270-13163520)
chr2 (21-252)||(11909478-11909721)
chr2 (24-167)||(15853100-15853242)
chr2 (24-167)||(29485445-29485587)
chr2 (24-167)||(45012533-45012675)
chr2 (24-167)||(16816861-16817002)
chr2 (24-167)||(16856018-16856159)
chr2 (55-167)||(36781745-36781856)
chr2 (24-167)||(2020979-2021120)
chr2 (24-167)||(21341457-21341598)
chr2 (55-167)||(42930933-42931044)
chr2 (24-167)||(2158162-2158303)
chr2 (24-167)||(2164578-2164719)
chr2 (24-167)||(12951346-12951487)
chr2 (24-167)||(21067487-21067628)
chr2 (24-167)||(43268410-43268551)
chr2 (24-167)||(13901486-13901627)
chr2 (24-167)||(34834342-34834483)
chr2 (24-167)||(34840786-34840927)
chr2 (81-167)||(34744876-34744962)
chr2 (100-167)||(21331599-21331666)
chr2 (85-167)||(17864032-17864114)
chr2 (191-252)||(21331703-21331765)
chr2 (191-252)||(21341635-21341697)
chr2 (114-167)||(37439154-37439207)
chr2 (191-252)||(36781893-36781955)
chr2 (191-252)||(24852736-24852797)
chr2 (119-167)||(36842337-36842385)
chr2 (119-167)||(41456155-41456203)
[»] chr1 (38 HSPs)
chr1 (24-252)||(47647122-47647361)
chr1 (15-167)||(13249265-13249415)
chr1 (24-167)||(45023085-45023227)
chr1 (24-167)||(1115511-1115654)
chr1 (24-167)||(32798274-32798417)
chr1 (24-167)||(23761867-23762008)
chr1 (24-252)||(11912792-11913033)
chr1 (24-167)||(31072868-31073011)
chr1 (24-167)||(1175156-1175297)
chr1 (24-167)||(26622021-26622162)
chr1 (24-167)||(44916888-44917030)
chr1 (24-167)||(44241905-44242048)
chr1 (24-167)||(39052869-39053010)
chr1 (24-167)||(39059241-39059382)
chr1 (55-167)||(28996559-28996670)
chr1 (55-167)||(29002275-29002386)
chr1 (24-167)||(41305050-41305191)
chr1 (24-167)||(45016331-45016472)
chr1 (54-167)||(9869655-9869767)
chr1 (55-167)||(4600079-4600190)
chr1 (55-167)||(43687179-43687290)
chr1 (24-167)||(6239206-6239347)
chr1 (24-167)||(42092446-42092587)
chr1 (81-252)||(31473711-31473894)
chr1 (24-167)||(35085556-35085699)
chr1 (187-252)||(1115687-1115753)
chr1 (191-252)||(4599980-4600042)
chr1 (191-252)||(9869556-9869618)
chr1 (191-252)||(32798175-32798237)
chr1 (119-167)||(30660389-30660437)
chr1 (186-252)||(13249168-13249234)
chr1 (186-248)||(30660296-30660358)
chr1 (191-252)||(31072769-31072831)
chr1 (199-252)||(35085457-35085511)
chr1 (191-252)||(44916789-44916851)
chr1 (191-247)||(41305229-41305286)
chr1 (119-167)||(28413298-28413346)
chr1 (119-167)||(39806606-39806654)
[»] chr4 (21 HSPs)
chr4 (38-246)||(49358859-49359078)
chr4 (24-167)||(7780877-7781019)
chr4 (24-167)||(8104431-8104573)
chr4 (24-167)||(13594658-13594800)
chr4 (24-167)||(17457405-17457547)
chr4 (24-167)||(27590855-27590997)
chr4 (24-167)||(36754321-36754463)
chr4 (24-167)||(37355879-37356021)
chr4 (24-252)||(5660079-5660320)
chr4 (24-167)||(30211065-30211208)
chr4 (55-167)||(16405896-16406007)
chr4 (55-167)||(37367876-37367987)
chr4 (24-167)||(30238779-30238920)
chr4 (24-167)||(41373537-41373678)
chr4 (55-163)||(55462334-55462440)
chr4 (191-252)||(16838068-16838130)
chr4 (191-252)||(30211245-30211307)
chr4 (187-251)||(36754496-36754561)
chr4 (114-167)||(52182787-52182840)
chr4 (191-237)||(30238696-30238742)
chr4 (119-167)||(13003431-13003479)
[»] chr3 (25 HSPs)
chr3 (24-251)||(2786156-2786396)
chr3 (24-252)||(47441252-47441493)
chr3 (24-167)||(27501497-27501639)
chr3 (29-167)||(10940839-10940976)
chr3 (31-165)||(43932129-43932262)
chr3 (24-167)||(23069014-23069155)
chr3 (24-167)||(24179624-24179766)
chr3 (24-167)||(43995626-43995768)
chr3 (55-167)||(25893776-25893887)
chr3 (24-167)||(4311017-4311158)
chr3 (24-252)||(20650655-20650896)
chr3 (24-167)||(9570078-9570219)
chr3 (24-167)||(9576580-9576721)
chr3 (55-167)||(6036816-6036927)
chr3 (55-167)||(32746920-32747030)
chr3 (191-252)||(43932028-43932090)
chr3 (191-252)||(43995528-43995590)
chr3 (107-167)||(6817173-6817233)
chr3 (119-167)||(17735892-17735940)
chr3 (119-167)||(19037161-19037209)
chr3 (81-167)||(461017-461103)
chr3 (191-252)||(10941013-10941075)
chr3 (191-232)||(9570257-9570298)
chr3 (191-232)||(9576759-9576800)
chr3 (119-167)||(20949814-20949862)
[»] chr7 (37 HSPs)
chr7 (27-139)||(7412540-7412652)
chr7 (21-167)||(8184919-8185064)
chr7 (21-167)||(8192479-8192624)
chr7 (21-167)||(48353007-48353152)
chr7 (24-167)||(6020394-6020536)
chr7 (21-167)||(48346623-48346768)
chr7 (24-167)||(19090359-19090501)
chr7 (24-167)||(26602462-26602603)
chr7 (55-167)||(9642477-9642588)
chr7 (55-167)||(33850204-33850315)
chr7 (24-167)||(15915187-15915328)
chr7 (24-167)||(15949708-15949849)
chr7 (24-167)||(23612939-23613080)
chr7 (25-164)||(45434138-45434276)
chr7 (24-167)||(1379497-1379638)
chr7 (24-167)||(1948164-1948305)
chr7 (24-167)||(2447196-2447337)
chr7 (24-167)||(3923624-3923765)
chr7 (24-167)||(5049443-5049584)
chr7 (24-167)||(6795988-6796129)
chr7 (24-167)||(8141975-8142116)
chr7 (55-167)||(14288265-14288376)
chr7 (55-167)||(14299450-14299561)
chr7 (55-167)||(21643068-21643179)
chr7 (55-167)||(22853767-22853878)
chr7 (24-167)||(36876095-36876236)
chr7 (24-167)||(39433457-39433600)
chr7 (85-167)||(8881003-8881085)
chr7 (191-252)||(22853915-22853977)
chr7 (187-252)||(33850348-33850414)
chr7 (196-252)||(39433358-39433415)
chr7 (215-251)||(7412651-7412687)
chr7 (191-252)||(9642625-9642687)
chr7 (191-252)||(45434037-45434099)
chr7 (119-167)||(10830750-10830798)
chr7 (119-167)||(11024542-11024590)
chr7 (119-167)||(21900814-21900862)
[»] chr8 (16 HSPs)
chr8 (15-252)||(29336585-29336832)
chr8 (24-167)||(15012938-15013081)
chr8 (40-167)||(36425276-36425402)
chr8 (24-167)||(45067946-45068088)
chr8 (40-167)||(11357739-11357865)
chr8 (24-167)||(1238765-1238906)
chr8 (24-167)||(6464107-6464248)
chr8 (24-167)||(7311899-7312040)
chr8 (24-167)||(8012851-8012992)
chr8 (24-167)||(36005013-36005154)
chr8 (24-167)||(36021329-36021470)
chr8 (24-167)||(36076517-36076658)
chr8 (24-167)||(16710198-16710339)
chr8 (100-167)||(26250197-26250264)
chr8 (191-252)||(45068125-45068187)
chr8 (191-252)||(15012839-15012901)
[»] chr5 (27 HSPs)
chr5 (24-252)||(12505295-12505536)
chr5 (24-167)||(2439351-2439493)
chr5 (21-167)||(2958409-2958554)
chr5 (21-167)||(2966878-2967023)
chr5 (24-167)||(25894179-25894321)
chr5 (24-167)||(4974113-4974256)
chr5 (24-169)||(22360512-22360655)
chr5 (24-169)||(22314378-22314521)
chr5 (24-167)||(29414199-29414340)
chr5 (24-167)||(5876768-5876909)
chr5 (24-167)||(29981009-29981150)
chr5 (24-167)||(40958148-40958289)
chr5 (24-167)||(42151369-42151510)
chr5 (55-167)||(34356850-34356960)
chr5 (55-167)||(34358641-34358751)
chr5 (24-161)||(29974514-29974649)
chr5 (24-161)||(30021993-30022128)
chr5 (88-167)||(37335697-37335776)
chr5 (81-167)||(42747634-42747720)
chr5 (191-252)||(4974014-4974076)
chr5 (107-156)||(17346799-17346848)
chr5 (191-252)||(42747537-42747598)
chr5 (119-167)||(34738688-34738736)
chr5 (108-156)||(40153906-40153954)
chr5 (119-167)||(2155745-2155793)
chr5 (119-167)||(3412915-3412963)
chr5 (119-167)||(12918575-12918623)
[»] chr6 (30 HSPs)
chr6 (24-167)||(4019765-4019907)
chr6 (24-167)||(4026191-4026333)
chr6 (24-167)||(7062046-7062188)
chr6 (24-167)||(7069232-7069374)
chr6 (24-167)||(34655801-34655943)
chr6 (24-167)||(1167009-1167151)
chr6 (40-167)||(31548445-31548571)
chr6 (24-167)||(34649350-34649492)
chr6 (24-167)||(21262104-21262245)
chr6 (24-167)||(4187236-4187378)
chr6 (55-167)||(31128851-31128962)
chr6 (24-167)||(1427954-1428095)
chr6 (24-167)||(4718071-4718212)
chr6 (24-167)||(9864290-9864432)
chr6 (24-164)||(13671343-13671483)
chr6 (24-167)||(32328023-32328164)
chr6 (25-143)||(4737910-4738027)
chr6 (55-167)||(34711117-34711228)
chr6 (105-167)||(29907409-29907471)
chr6 (111-167)||(22870789-22870845)
chr6 (55-167)||(30121098-30121209)
chr6 (191-252)||(9864469-9864531)
chr6 (191-252)||(13671526-13671588)
chr6 (125-167)||(27670644-27670686)
chr6 (191-252)||(29907310-29907372)
chr6 (102-157)||(20382813-20382868)
chr6 (187-252)||(1167184-1167250)
chr6 (186-252)||(22870692-22870758)
chr6 (102-167)||(14759214-14759279)
chr6 (119-167)||(9847071-9847119)
[»] scaffold0936 (2 HSPs)
scaffold0936 (24-165)||(2791-2932)
scaffold0936 (191-252)||(2973-3035)
[»] scaffold0510 (1 HSPs)
scaffold0510 (24-167)||(8411-8552)
[»] scaffold0060 (1 HSPs)
scaffold0060 (24-167)||(15721-15863)
[»] scaffold0513 (1 HSPs)
scaffold0513 (24-167)||(11663-11804)
[»] scaffold0053 (1 HSPs)
scaffold0053 (24-167)||(50240-50381)
[»] scaffold0043 (1 HSPs)
scaffold0043 (24-167)||(4536-4677)
[»] scaffold0343 (2 HSPs)
scaffold0343 (55-167)||(3195-3306)
scaffold0343 (191-252)||(3096-3158)


Alignment Details
Target: chr2 (Bit Score: 169; Significance: 1e-90; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 13163520 - 13163270
Alignment:
Q  13 agaaacaaagggtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaa 112  Q
    ||||||| || ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13163520 agaaacatagagtgagtgtgatagaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaa 13163421  T
Q  113 agttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttgaccaggctaaacatgta-----------tgtaatctatgattctag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||           | |||| ||||||| |||    
T  13163420 agttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttgatcaagcaaaacatgtaatcttttgatctataatatatgattgtag 13163321  T
Q  202 catttgatttgatattgagattattcctgcaatttatgcttatgtttgatt 252  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13163320 catttgatttgatattgagattattcttgcaatttatgcttatgtttgatt 13163270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 21 - 252
Target Start/End: Original strand, 11909478 - 11909721
Alignment:
Q  21 agggtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttacca 120  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  11909478 agggtgagagtgatagaaggtggattcttccatatttgtggagaaatcacaagtttgtatatgaatcttcaccttttagttcaatcttgcaaagttacca 11909577  T
Q  121 tgacaatgagtagctaaatctccattgttgggattagaggtacttgaccaggctaaacatgta-----------tgtaatctatgattctagcatttgat 209  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |  ||||||||| ||           | |||| |||||||||||||||||||    
T  11909578 tgacaatgagtagctaaatctccattgttgggatcggaggtacttgatctagctaaacatttaatcttttaatctttaatatatgattctagcatttgat 11909677  T
Q  210 ttgatattgagattattcctgcaattta-tgcttatgtttgatt 252  Q
    ||||||||||| |||||| |||| |||| |||||||||||||||    
T  11909678 ttgatattgaggttattcttgcactttattgcttatgtttgatt 11909721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 15853242 - 15853100
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  15853242 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 15853144  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  15853143 caatgagtagctaaatctcctttgttgggattagaggtacttga 15853100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 29485587 - 29485445
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  29485587 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttaaattcattcttgcaaggcttccatga 29485489  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  29485488 caatgagtagctaaatctcctttgttgggattagaggtacttga 29485445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 45012675 - 45012533
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  45012675 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 45012577  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  45012576 caatgagtagctaaatctcctttgttgggattagaggtacttga 45012533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 16816861 - 16817002
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  16816861 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 16816958  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  16816959 caatgagtagctaaatctcctttgttgggattagaggtacttga 16817002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 16856018 - 16856159
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  16856018 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 16856115  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  16856116 caatgagtagctaaatctcctttgttgggattagaggtacttga 16856159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 36781745 - 36781856
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| ||||||||| |||| ||| |||||  ||||| | |||| |||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  36781745 tttgttgagagatcacaagtgtgta-atggatctttctctttcaattcattcttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 36781843  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  36781844 tagaggtacttga 36781856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 2020979 - 2021120
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    ||||| |||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  2020979 gtgagggtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatctttcttcttcaattcattcttgcaaggcttccatga 2021076  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  2021077 caatgagtagctaaatctcctttgttgggattagaggtacttga 2021120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 21341457 - 21341598
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  21341457 gtgagagtgatagaaagtggattcttcatcctttgttgagaaatcacaagtt-gta-atgaatctttcttcttcaattcattcttgcaaggcttccatga 21341554  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||| ||| |||||||||||||||||||||||    
T  21341555 caatgagtagctaaatatcctttgttgggattagaggtacttga 21341598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 42930933 - 42931044
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    ||||||||||||||| ||||| ||| |||||| ||  || || | |||| |||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  42930933 tttgttgagaaatcataagtt-gtaaatgaatttttctccttcaattcattcttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 42931031  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  42931032 tagaggtacttga 42931044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 2158303 - 2158162
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  2158303 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 2158206  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  2158205 caatgagtagctaaatctcctttgttgggattagaggtacttga 2158162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 2164719 - 2164578
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  2164719 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 2164622  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  2164621 caatgagtagctaaatctcctttgttgggattagaggtacttga 2164578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 12951487 - 12951346
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  12951487 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 12951390  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  12951389 caatgagtagctaaatctcctttgttgggattagaggtacttga 12951346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 21067487 - 21067628
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || ||||||||||     ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  21067487 gtgagagtgatagaaagtggattctttatcttttgttgagaaatcacaagtt-gta-atgaatctttcttcttcaattcattcttgcaaggcttccatga 21067584  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||| ||||    
T  21067585 caatgagtagctaaatctcctttgttgggattagaggtatttga 21067628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 43268551 - 43268410
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  43268551 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 43268454  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  43268453 caatgagtagctaaatctcctttgttgggattagaggtacttga 43268410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 13901486 - 13901627
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatctt-catcttttacttcaatcttgcaaagttaccatg 122  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| ||||||||| | ||||  | |||| |||||||| | | |||||    
T  13901486 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcga-ttcattcttgcaaggcttccatg 13901582  T
Q  123 acaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  13901583 acaatgagtagctaaatctcctttgttgggattagaggtacttga 13901627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 34834342 - 34834483
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  34834342 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 34834439  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  34834440 caatgagtagctaaatctcctttgttgggactagaggtacttga 34834483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 34840786 - 34840927
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  34840786 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 34840883  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  34840884 caatgagtagctaaatctcctttgttgggactagaggtacttga 34840927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 167
Target Start/End: Original strand, 34744876 - 34744962
Alignment:
Q  81 atgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||  | || | ||| |||  |||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  34744876 atgaatcttcatcttttcttccatttttgtaaaactaccatgacaatgagtagctaaatctcctttgttgggattagatgtacttga 34744962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 21331599 - 21331666
Alignment:
Q  100 ttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||| |||||||| | | |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  21331599 ttcattcttgcaaggcttccatgacaatgagtagctaaatatcctttgttgggattagaggtacttga 21331666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 17864114 - 17864032
Alignment:
Q  85 atcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||  | || | ||| || |||| |||||||||||  |||||||||||| |||||||||||||||||||||||    
T  17864114 atcttcatcttttcttccacttttgtaatgttatcatgacaatgatcagctaaatctcctttgttgggattagaggtacttga 17864032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 21331703 - 21331765
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  21331703 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 21331765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 21341635 - 21341697
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  21341635 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 21341697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 37439154 - 37439207
Alignment:
Q  114 gttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||| |||||||||||  | |||||||||| |||||||||||||||||||||||    
T  37439154 gttatcatgacaatgatcaactaaatctcctttgttgggattagaggtacttga 37439207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 36781893 - 36781955
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||| ||||||    
T  36781893 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgcttgatt 36781955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 24852736 - 24852797
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaatttatgcttatgtttgatt 252  Q
    ||||||||||||  || || |||||||||| |||||| ||||||| || |||||||||||||    
T  24852736 tatgattctagctatttatgtgatattgagtttattcttgcaattcattcttatgtttgatt 24852797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 36842385 - 36842337
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| | |||||||||||||||||||||    
T  36842385 catgacaatgatgaactaaatctccttagttgggattagaggtacttga 36842337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 41456203 - 41456155
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| | |||||||||||||||||||||    
T  41456203 catgacaatgatgaactaaatctccttcgttgggattagaggtacttga 41456155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 2e-79; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 24 - 252
Target Start/End: Complemental strand, 47647361 - 47647122
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47647361 gtgagagtgatagaaggtggattcttccatatttgttgagaaatcacaagtttgcatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 47647262  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttgaccaggctaaacatg-----------tatgtaatctatgattctagcatttgatttg 212  Q
    |||||||||||||||||||||||||| |||||| |||| ||| | ||  |||||||||           ||| |||| ||||||||||||||||||||||    
T  47647261 caatgagtagctaaatctccattgttaggattataggtgctttatcaacctaaacatgtaatcttttgatatttaatatatgattctagcatttgatttg 47647162  T
Q  213 atattgagattattcctgcaatttatgcttatgtttgatt 252  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  47647161 atattgagattattcttgcaattcatgcttatgtttgatt 47647122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 13249415 - 13249265
Alignment:
Q  15 aaacaaagggtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaag 114  Q
    ||||| || ||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| ||||||  ||||||||| |||||||||||||| |    
T  13249415 aaacacagagtgagagtgataggaagtggattcttcaatatttgttgagaaatcacaagtttgta-atgaattctcatcttttccttcaatcttgcaagg 13249317  T
Q  115 ttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||| ||||| |||||||| |||||||||| |||||  ||||||||||||||||    
T  13249316 ttatcatgataatgagtaactaaatctcctttgtt-agattagaggtacttga 13249265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 45023227 - 45023085
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  45023227 gtgagagtgatagaaagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 45023129  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  45023128 caatgagtagctaaatctcctttgttgggattagaggtacttga 45023085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 1115511 - 1115654
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatattt-gttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatg 122  Q
    |||||||||||| || ||||||||||||  |||| ||||||| |||||||||||||| ||||||| |  ||||| | |||| |||||||| | | |||||    
T  1115511 gtgagagtgatagaaagtggattcttcctcattttgttgagagatcacaagtttgta-atgaatccttctctttcaattcattcttgcaaggcttccatg 1115609  T
Q  123 acaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  1115610 acaatgagtagctaaatctcctttgttgggattagaggtacttga 1115654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 32798417 - 32798274
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatattt-gttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatg 122  Q
    |||||||||||| || |||||||||| |  |||| ||||||| |||||||||||||| ||||||| |  ||||| | |||| |||||||| | | |||||    
T  32798417 gtgagagtgatagaaagtggattctttctcattttgttgagagatcacaagtttgta-atgaatccttctctttcaattcattcttgcaaggcttccatg 32798319  T
Q  123 acaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  32798318 acaatgagtagctaaatctcctttgttgggattagaggtacttga 32798274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 23761867 - 23762008
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||   |||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  23761867 gtgagagtgatagaaagtggattcttcatcatttgttgagaaatcacaagtt-gta-atgaatcttacttcttcaattcattcttgcaaggcttccatga 23761964  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  23761965 caatgagtagctaaatctcctttgttgggattagaggtacttga 23762008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 252
Target Start/End: Original strand, 11912792 - 11913033
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    ||||||||||||| |||||||||||| |  ||||||||||| |||||||  ||||| ||||||| |  ||||| | |||| | |||||| | | ||||||    
T  11912792 gtgagagtgataataggtggattctttctcatttgttgagagatcacaaagttgta-atgaatccttctctttcaattcatttttgcaaggcttccatga 11912890  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga-ccaggctaaacatgta------tg------taatctatgattctagcatttgatt 210  Q
    |||||||||||||||||||| |||||| |||||||||||||||| |   ||||||||||||      ||       ||| ||||||||||||||||||||    
T  11912891 caatgagtagctaaatctcctttgttgagattagaggtacttgatcttagctaaacatgtaatcttttgatttataaatatatgattctagcatttgatt 11912990  T
Q  211 tgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||||||||  |||||| |||| ||| ||||||||||||||||    
T  11912991 tgatattgatgttattcttgcactttaatgcttatgtttgatt 11913033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 31073011 - 31072868
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaa-tcttcatcttttacttcaatcttgcaaagttaccatg 122  Q
    |||||||||||| || |||||||||| |  ||||||||||| |||||||||||||| ||||| || |  ||||| | |||| |||||||| | | |||||    
T  31073011 gtgagagtgatagaaagtggattctttctcatttgttgagagatcacaagtttgta-atgaaatccttctctttcaattcattcttgcaaggcttccatg 31072913  T
Q  123 acaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||| |||||||||||||||| |||||||||||||||||||||||    
T  31072912 acaacgagtagctaaatctcctttgttgggattagaggtacttga 31072868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 1175297 - 1175156
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  1175297 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 1175200  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  1175199 caatgagtagctaaatctcctttgttgggattagaggtacttga 1175156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 26622162 - 26622021
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  26622162 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatctttcttcttcaattcattcttgcaaggcttccatga 26622065  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  26622064 caatgagtagctaaatctcctttgttgggattagaggtacttga 26622021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 44917030 - 44916888
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || || ||||||||| |||||||||||| |||||||  ||||| ||||||| |  ||||| | |||| |||||||| | | | ||||    
T  44917030 gtgagagtgatagaaagtagattcttccttatttgttgagagatcacaaagttgta-atgaatcattctctttcaattcattcttgcaaggcttcaatga 44916932  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  44916931 caatgagtagctaaatctcctttgttgggattagagatacttga 44916888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 44242048 - 44241905
Alignment:
Q  24 gtgagagtgataaaaggtggattcttc--catatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccat 121  Q
    |||||||||||| || ||||||||| |  ||| |||||||||| ||||||||| |||| ||| ||| |  ||||| | |||| |||||||| | | ||||    
T  44242048 gtgagagtgatagaaagtggattctacatcat-tttgttgagagatcacaagtgtgta-atggatcattctctttcaattcattcttgcaaggcttccat 44241951  T
Q  122 gacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  44241950 gacaatgagtagctaaatctccattgttgggattagaggtacttga 44241905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 39052869 - 39053010
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    ||||||||||||||  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  39052869 gtgagagtgataaagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 39052966  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  39052967 caatgagtagctaaatctcctttgttgggattagaggtacttga 39053010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 39059241 - 39059382
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    ||||||||||||||  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  39059241 gtgagagtgataaagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 39059338  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  39059339 caatgagtagctaaatctcctttgttgggattagaggtacttga 39059382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 28996670 - 28996559
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| ||||||| | |||| ||| |||||  ||||| | |||| |||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  28996670 tttgttgagagatcacaaatgtgta-atggatctttctctttcaattcattcttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 28996572  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  28996571 tagaggtacttga 28996559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 29002386 - 29002275
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| ||||||| | |||| ||| |||||  ||||| | |||| |||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  29002386 tttgttgagagatcacaaatgtgta-atggatctttctctttcaattcattcttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 29002288  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  29002287 tagaggtacttga 29002275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 41305050 - 41305191
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttg-ttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatg 122  Q
    |||||||||||| || ||||||||||| || |||| ||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | |||||    
T  41305050 gtgagagtgatagaaagtggattcttc-atctttggttgagaaatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatg 41305146  T
Q  123 acaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    | ||||||||||||||||||| |||||||||||||||||||||||    
T  41305147 ataatgagtagctaaatctcctttgttgggattagaggtacttga 41305191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 45016472 - 45016331
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  45016472 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 45016375  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  45016374 caatgagtagctaaatctcctttgttgggattagaggtacttga 45016331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 167
Target Start/End: Complemental strand, 9869767 - 9869655
Alignment:
Q  54 atttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttggga 153  Q
    ||||||||||| ||||||||| |||| ||| ||| |  ||||| | |||| |||||||| | | |||||||||||||||| ||||||||| |||||||||    
T  9869767 atttgttgagagatcacaagtgtgta-atggatccttctctttcaattcattcttgcaaggcttccatgacaatgagtagttaaatctcctttgttggga 9869669  T
Q  154 ttagaggtacttga 167  Q
    ||||||||||||||    
T  9869668 ttagaggtacttga 9869655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 4600190 - 4600079
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| ||||||||| | || ||| ||| |  ||||| | |||| |||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  4600190 tttgttgagagatcacaagtgtata-atggatccttctctttcaattcattcttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 4600092  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  4600091 tagaggtacttga 4600079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 43687290 - 43687179
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| ||||||||| |||| ||  |||||  ||||| | |||| |||||||| | | ||||||||||||||||||| |||||| ||||||||||    
T  43687290 tttgttgagagatcacaagtgtgta-atagatctttctctttcaattcattcttgcaaggcttccatgacaatgagtagctagatctcctttgttgggat 43687192  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  43687191 tagaggtacttga 43687179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 6239347 - 6239206
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  6239347 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 6239250  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  6239249 caatgagtagctaaatctcctttgttgggactagaggtacttga 6239206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 42092587 - 42092446
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  42092587 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 42092490  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||| ||| |||||||||||||||||||||||    
T  42092489 caatgagtagctaaatttcctttgttgggattagaggtacttga 42092446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 252
Target Start/End: Complemental strand, 31473894 - 31473711
Alignment:
Q  81 atgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttgaccaggctaaacat 180  Q
    ||||||||||||| |||  | || | ||| |||| |||||||| ||||||||||||||||| | ||||||||||||||||||||||| || ||  | |||    
T  31473894 atgaatcttcatcatttcttccatttttgtaaagctaccatgataatgagtagctaaatctactttgttgggattagaggtacttgatcaagcctagcat 31473795  T
Q  181 gta------------tgtaatctatgattctagcatttgatttgatattgagattattcctgcaatttatgcttatgtttgatt 252  Q
    |||            |  ||| |||||||||||| ||| |||||||||||||||||||| ||||||| ||| ||||||||||||    
T  31473794 gtaatcttttgatccttaaatatatgattctagctttttatttgatattgagattattcttgcaattcatgtttatgtttgatt 31473711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 35085699 - 35085556
Alignment:
Q  24 gtgagagtgataaaaggtggattcttc--catatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccat 121  Q
    |||||||||||| || ||||||||| |  ||| |||||||||| ||||||||| |||| ||| || ||  ||||| | |||| |||||||| | | ||||    
T  35085699 gtgagagtgatagaaagtggattctacatcat-tttgttgagagatcacaagtgtgta-atggatatttctctttcaattcattcttgcaaggcttccat 35085602  T
Q  122 gacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||| |||||||||| ||||| |||||| ||||||||||    
T  35085601 gacaatgagtacctaaatctcctttgttaggattaaaggtacttga 35085556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 1115687 - 1115753
Alignment:
Q  187 aatctatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    ||| |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  1115687 aatatatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 1115753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 4600042 - 4599980
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  4600042 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 4599980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 9869618 - 9869556
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  9869618 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 9869556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 32798237 - 32798175
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  32798237 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 32798175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 30660437 - 30660389
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||| ||||||||||||||||||| |||||||||||| || |||||||    
T  30660437 catgagaatgagtagctaaatctcctttgttgggattaaagatacttga 30660389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 13249234 - 13249168
Alignment:
Q  186 taatctatgattctagcatttgatttgatattgagattattcctgcaatttatgcttatgtttgatt 252  Q
    |||| ||||||||||||  || |||||||||||||||||||| || |||| ||| |||| |||||||    
T  13249234 taatatatgattctagctctttatttgatattgagattattcttgtaattcatgtttatatttgatt 13249168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 30660358 - 30660296
Alignment:
Q  186 taatctatgattctagcatttgatttgatattgagattattcctgcaatttatgcttatgttt 248  Q
    |||| ||||||||||||  || |||||||||||||||||||| ||||| | ||| ||||||||    
T  30660358 taatatatgattctagctctttatttgatattgagattattcttgcaaatcatgtttatgttt 30660296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 31072831 - 31072769
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||| ||||||||||||    
T  31072831 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgtttatgtttgatt 31072769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 35085511 - 35085457
Alignment:
Q  199 tagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  35085511 tagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 35085457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 44916851 - 44916789
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||| ||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  44916851 tatggttctaacatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 44916789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 41305229 - 41305286
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtt 247  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| |||||||||||    
T  41305229 tatggttctagcatttgatttgatattgatgttattcttgcattttaatgcttatgtt 41305286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 28413298 - 28413346
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| | |||||||||||||||||||||    
T  28413298 catgacaatgatgaactaaatctccttagttgggattagaggtacttga 28413346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 39806654 - 39806606
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| | |||||||||||||||||||||    
T  39806654 catgacaatgatgaactaaatctccttagttgggattagaggtacttga 39806606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 38 - 246
Target Start/End: Original strand, 49358859 - 49359078
Alignment:
Q  38 aggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaa 137  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  49358859 aggtggattctttcatatttgttgagaactcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgaaaatgagtagctaa 49358958  T
Q  138 atctccattgttgggattagaggtacttgaccaggctaaacatgta-----------tgtaatctatgattctagcatttgatttgatattgagattatt 226  Q
    |||||||||||||||||||||||||||||| || ||||||||||||           | |||| ||||||||||||||||||||||||||||| ||||||    
T  49358959 atctccattgttgggattagaggtacttgatcaagctaaacatgtaatcttttgatctttaatatatgattctagcatttgatttgatattgatattatt 49359058  T
Q  227 cctgcaatttatgcttatgt 246  Q
    | ||||||||||||||||||    
T  49359059 cttgcaatttatgcttatgt 49359078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 7781019 - 7780877
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||   |||||||||||||||||||||||||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  7781019 gtgagagtgatagaaagtggattcttcatcatttgttgagaaatcacaagtttgta-atgaatctttcttcttcaattcattcttgcaaggcttccatga 7780921  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  7780920 caatgagtagctaaatctcctttgttgggattagaggtacttga 7780877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 8104573 - 8104431
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  8104573 gtgagagtgatagaaagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 8104475  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  8104474 caatgagtagctaaatctcctttgttgggattagaggtacttga 8104431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 13594800 - 13594658
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  13594800 gtgagagtgatagaaagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 13594702  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  13594701 caatgagtagctaaatctcctttgttgggattagaggtacttga 13594658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 17457547 - 17457405
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  17457547 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 17457449  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  17457448 caatgagtagctaaatctcctttgttgggattagaggtacttga 17457405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 27590997 - 27590855
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  27590997 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 27590899  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  27590898 caatgagtagctaaatctcctttgttgggattagaggtacttga 27590855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 36754321 - 36754463
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||||||  ||||| ||||||| |  ||||| | |||| |||||||| | | ||||||    
T  36754321 gtgagagtgatcaaaggtggattcttcctcatttgttgagagatcacaaagttgta-atgaatccttctctttcaattcattcttgcaaggcttccatga 36754419  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
T  36754420 caatgagtagttaaatctcctttgttgggattagaggtacttga 36754463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 37355879 - 37356021
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  37355879 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 37355977  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  37355978 caatgagtagctaaatctcctttgttgggattagaggtacttga 37356021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 252
Target Start/End: Original strand, 5660079 - 5660320
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    ||||||||| | ||||||||||||||||  ||||||||||| |||||||  ||||| | ||||| |  ||||| | |||| |||||||||| | ||||||    
T  5660079 gtgagagtgtttaaaggtggattcttcctcatttgttgagagatcacaaagttgta-aggaatccttctctttcaattcattcttgcaaagcttccatga 5660177  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga-ccaggctaaacatgta------tg------taatctatgattctagcatttgatt 210  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| |   ||||||||||||      ||       ||| |||| |||||||||||||||    
T  5660178 caatgagtagttaaatctcctttgttgggattagaggtacttgatcttagctaaacatgtaatcttttgatctataaatatatggttctagcatttgatt 5660277  T
Q  211 tgatattgagattattcctgcaattta-tgcttatgtttgatt 252  Q
    ||||||||||||||||| |||| |||| || ||||||||||||    
T  5660278 tgatattgagattattcttgcactttattgtttatgtttgatt 5660320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 30211065 - 30211208
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatctttt-acttcaatcttgcaaagttaccatg 122  Q
    |||||||||||| || ||||||||||||  ||||||||||| |||||||||||||| ||||||| |  |||||| | |||| |||||||| | | |||||    
T  30211065 gtgagagtgatagaaagtggattcttcctcatttgttgagagatcacaagtttgta-atgaatccttctcttttcaattcattcttgcaaggcttccatg 30211163  T
Q  123 acaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||    
T  30211164 acaataagtagctaaatctcctttgtttggattagaggtacttga 30211208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 16406007 - 16405896
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| ||||||||| |||| ||||||| |  ||||| | |||| |||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  16406007 tttgttgagagatcacaagtgtgta-atgaatcattctctttcaattcattcttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 16405909  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  16405908 tagaggtacttga 16405896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 37367876 - 37367987
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| ||||||||| |||| ||| |||||  ||||| | ||||  ||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  37367876 tttgttgagagatcacaagtgtgta-atggatctttctctttcaattcatccttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 37367974  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  37367975 tagaggtacttga 37367987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 30238920 - 30238779
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| |   ||||||    
T  30238920 gtgagagtgatagagagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatctttcttcttcaattcattcttgcaaggcctccatga 30238823  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  30238822 caatgagtagctaaatctcctttgttgggattagaggtacttga 30238779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 41373678 - 41373537
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  41373678 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 41373581  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  41373580 caatgagtagctaaatctcctttgttgggattagaggtacttga 41373537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 55462334 - 55462440
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    ||||||||||||||| ||||| ||| |||||||||  |  || | |||| |||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  55462334 tttgttgagaaatcaaaagtt-gta-atgaatctttcttcttcaattcattcttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 55462431  T
Q  155 tagaggtac 163  Q
    |||||||||    
T  55462432 tagaggtac 55462440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 16838068 - 16838130
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  16838068 tatggttctagcatttgatttgatattgatgttattcttgcattttaatgcttatgtttgatt 16838130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 30211245 - 30211307
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  30211245 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 30211307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 36754496 - 36754561
Alignment:
Q  187 aatctatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgat 251  Q
    ||| |||| ||||||||||||||||||||||||  |||||| |||| ||| |||||||||||||||    
T  36754496 aatatatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgat 36754561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 52182787 - 52182840
Alignment:
Q  114 gttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||| |||||||||||  | |||||||||| |||||||||||||||||||||||    
T  52182787 gttatcatgacaatgatcaactaaatctcctttgttgggattagaggtacttga 52182840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 30238742 - 30238696
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattta 237  Q
    |||| ||||||||||||||||||||||||  |||||| |||||||||    
T  30238742 tatggttctagcatttgatttgatattgatgttattcttgcaattta 30238696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 13003431 - 13003479
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| | |||||||||||||||||||||    
T  13003431 catgacaatgatgaactaaatctccttagttgggattagaggtacttga 13003479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 5e-65; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 24 - 251
Target Start/End: Complemental strand, 2786396 - 2786156
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||| | |||||||||||||||||| |||||    
T  2786396 gtgagagtgatagaaggtggattcttccatttttgtggagaaatcacaagtttgaatatgaatcttcatctttcaattcaatcttgcaaagttatcatga 2786297  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga-ccaggctaaacatgta----tgtaatc-------tatgattctagcatttgattt 211  Q
    |||||||||||||||| ||||||||||||||||||||||||||| | | ||||||||||||    | |||||       |||||||||||||||||||||    
T  2786296 caatgagtagctaaatttccattgttgggattagaggtacttgatctaagctaaacatgtaatcttttaatccttaatatatgattctagcatttgattt 2786197  T
Q  212 gatattgagattattcctgcaattta-tgcttatgtttgat 251  Q
    ||||||||| |||||| |||| |||| ||||||||||||||    
T  2786196 gatattgaggttattcttgcattttattgcttatgtttgat 2786156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 252
Target Start/End: Complemental strand, 47441493 - 47441252
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    ||||||||| |  |||||||||||||||  ||||||||||| |||||||  ||||| |||||||||| ||||| | |||| |||||||||| | ||||||    
T  47441493 gtgagagtgtttgaaggtggattcttcctcatttgttgagagatcacaaagttgta-atgaatcttcctctttcaattcactcttgcaaagcttccatga 47441395  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga-ccaggctaaacatgta---tgt---------aatctatgattctagcatttgatt 210  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| |   ||||||||||||   |||         ||| |||| |||||||||||||||    
T  47441394 caatgagtagctaaatctcctttgttgggattagagttacttgatcttagctaaacatgtaatttgttgatctataaatatatggttctagcatttgatt 47441295  T
Q  211 tgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||||||||  |||||| |||| ||| ||||||||||||||||    
T  47441294 tgatattgatgttattcttgcactttaatgcttatgtttgatt 47441252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 27501497 - 27501639
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  27501497 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 27501595  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  27501596 caatgagtagctaaatctcctttgttgggattagaggtacttga 27501639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 167
Target Start/End: Original strand, 10940839 - 10940976
Alignment:
Q  29 agtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatg 128  Q
    ||||||| || ||||||||||||  ||||||||||| |||||||||||||| ||||||| |  ||||| | |||| |||||||| | | |||||||||||    
T  10940839 agtgatagaaagtggattcttcctcatttgttgagagatcacaagtttgta-atgaatccttctctttcaattcattcttgcaaggcttccatgacaatg 10940937  T
Q  129 agtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  10940938 agtagctaaatctcatttgttgggattagaggtacttga 10940976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 43932262 - 43932129
Alignment:
Q  31 tgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgag 130  Q
    ||||| || ||||||||||||  | |||||||||||||||||||||||| ||||||| |  ||||| | |||| |||||||| | | |||||||||||||    
T  43932262 tgatagaatgtggattcttcctcaattgttgagaaatcacaagtttgta-atgaatccttctctttcaattcattcttgcaaggcttccatgacaatgag 43932164  T
Q  131 tagctaaatctccattgttgggattagaggtactt 165  Q
    ||||||||||||| |||||||||||||||||||||    
T  43932163 tagctaaatctcctttgttgggattagaggtactt 43932129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 23069155 - 23069014
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  ||||| | |||| |||||||| | | ||||||    
T  23069155 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatctttctctttcaattcattcttgcaaggcttccatga 23069058  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
T  23069057 caatgagtagataaatctcctttgttgggattagaggtacttga 23069014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 24179766 - 24179624
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  24179766 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 24179668  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  24179667 caatgagtagctaaatctcctttgttgggattaggggtacttga 24179624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 43995768 - 43995626
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |||||||||||||||  ||||||||||| ||||||   ||||| ||||||| |  ||||| | |||| ||||| || | | ||||||    
T  43995768 gtgagagtgatagaaggtggattcttcctcatttgttgagagatcacatagttgta-atgaatccttctctttcaattcattcttgtaaggcttccatga 43995670  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  43995669 caatgagtagctaaatctcctttgttgggattagaggtacttga 43995626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 25893887 - 25893776
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  25893887 tttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 25893789  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  25893788 tagaggtacttga 25893776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 4311017 - 4311158
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| ||||||| |  |  |||| |||| |||||||| | | ||||||    
T  4311017 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatcctgcttctttaattcattcttgcaaggcttccatga 4311114  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  4311115 caatgagtagctaaatctcctttgttgggattagaggtacttga 4311158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 252
Target Start/End: Original strand, 20650655 - 20650896
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaat-cttcatcttttacttcaatcttgcaaagttaccatg 122  Q
    ||||||||| |  |||||||||||||||  |||||| |||| |||||||  ||||| |||||| |||| ||||| |||||| |||||||||| | |||||    
T  20650655 gtgagagtgtttgaaggtggattcttcctcatttgtggagagatcacaaagttgta-atgaattcttc-tctttcacttcattcttgcaaagcttccatg 20650752  T
Q  123 acaatgagtagctaaatctccattgttgggattagaggtacttga-ccaggctaaacatgta------tg------taatctatgattctagcatttgat 209  Q
    ||||  ||||||||||||||| ||||| ||||||||||||||||| |   ||||||||||||      ||       ||| |||||||||||||||||||    
T  20650753 acaacaagtagctaaatctcctttgttaggattagaggtacttgatcttagctaaacatgtaatcttttgatctataaatatatgattctagcatttgat 20650852  T
Q  210 ttgatattgagattattcctgcaattta-tgcttatgtttgatt 252  Q
    |||||||||||||||||| || | |||| || ||||||||||||    
T  20650853 ttgatattgagattattcttgaactttattgtttatgtttgatt 20650896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 9570078 - 9570219
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  9570078 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 9570175  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  9570176 caatgagtagctaaatctcctttgttgggattagaggtacttga 9570219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 9576580 - 9576721
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  9576580 gtgagagtgatagatagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 9576677  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  9576678 caatgagtagctaaatctcctttgttgggattagaggtacttga 9576721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 6036927 - 6036816
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| ||||||||| ||||  ||| ||||  ||||| | |||| |||||||| | | ||||||||||||||||||||||||||  |||||||||    
T  6036927 tttgttgagagatcacaagtgtgtaattga-tctttctctttcaattcattcttgcaaggcttccatgacaatgagtagctaaatctcctctgttgggat 6036829  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  6036828 tagaggtacttga 6036816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 32747030 - 32746920
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | |||||||||||||||| ||||||||| ||||||||||    
T  32747030 tttgttgagaaatcacaagtt-gta-atgaatctttcttcttcaattcattcttgcaaggcttccatgacaatgagtagttaaatctcctttgttgggat 32746933  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  32746932 tagaggtacttga 32746920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 43932090 - 43932028
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  43932090 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 43932028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 43995590 - 43995528
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  43995590 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 43995528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 6817173 - 6817233
Alignment:
Q  107 ttgcaaagttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||| | |||||||||||||||||||||||||||  || ||||||||||| ||| ||||    
T  6817173 ttgcaaggctaccatgacaatgagtagctaaatctcactttttgggattagatgtaattga 6817233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 17735940 - 17735892
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| |||||||||||||||||||||||    
T  17735940 catgacaatgatcaactaaatctcctttgttgggattagaggtacttga 17735892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 19037209 - 19037161
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| |||||||||||||||||||||||    
T  19037209 catgacaatgatcaactaaatctcctttgttgggattagaggtacttga 19037161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 167
Target Start/End: Original strand, 461017 - 461103
Alignment:
Q  81 atgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||| |||  |||| | |||||| |||  |||||||||||  | |||||||| | ||| |||||||||||||||||||    
T  461017 atgaatcttcatcatttctttcattattgcaatgttgtcatgacaatgatcaactaaatcttctttgctgggattagaggtacttga 461103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 10941013 - 10941075
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||| ||||||||||||    
T  10941013 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgtttatgtttgatt 10941075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 9570257 - 9570298
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgca 232  Q
    |||| ||||||||||||||||||||||||| |||||| ||||    
T  9570257 tatggttctagcatttgatttgatattgaggttattcttgca 9570298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 9576759 - 9576800
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgca 232  Q
    |||| ||||||||||||||||||||||||| |||||| ||||    
T  9576759 tatggttctagcatttgatttgatattgaggttattcttgca 9576800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 20949814 - 20949862
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| | |||||||||||||||||||||    
T  20949814 catgacaatgatgaactaaatctccttagttgggattagaggtacttga 20949862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 27 - 139
Target Start/End: Original strand, 7412540 - 7412652
Alignment:
Q  27 agagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaa 126  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7412540 agagtgatagaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttatcatgacaa 7412639  T
Q  127 tgagtagctaaat 139  Q
    |||||||||||||    
T  7412640 tgagtagctaaat 7412652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 8184919 - 8185064
Alignment:
Q  21 agggtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttacca 120  Q
    ||||||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | |||    
T  8184919 agggtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttcca 8185017  T
Q  121 tgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  8185018 tgacaatgagtagctaaatctcctttgttgggattagaggtacttga 8185064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 8192479 - 8192624
Alignment:
Q  21 agggtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttacca 120  Q
    ||||||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | |||    
T  8192479 agggtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttcca 8192577  T
Q  121 tgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  8192578 tgacaatgagtagctaaatctcctttgttgggattagaggtacttga 8192624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 48353007 - 48353152
Alignment:
Q  21 agggtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttacca 120  Q
    ||||||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | |||    
T  48353007 agggtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttcca 48353105  T
Q  121 tgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  48353106 tgacaatgagtagctaaatctcctttgttgggattagaggtacttga 48353152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 6020394 - 6020536
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||  | ||||||||||||||||||||  ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  6020394 gtgagagtgatagaaagtggattcttcattctttgttgagaaatcacaagtc-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 6020492  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  6020493 caatgagtagctaaatctcctttgttgggattagaggtacttga 6020536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 48346623 - 48346768
Alignment:
Q  21 agggtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttacca 120  Q
    ||||||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | |||    
T  48346623 agggtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttcca 48346721  T
Q  121 tgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  48346722 tgataatgagtagctaaatctcctttgttgggattagaggtacttga 48346768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 19090501 - 19090359
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatattt-gttgagaaatcacaagtttgtatatgaatctt-catcttttacttcaatcttgcaaagttaccat 121  Q
    |||||||||||| || ||||||||||| |||||| |||||||||||||||||| ||| ||||||||| | ||||| | |||| |||||||| | | ||||    
T  19090501 gtgagagtgatagaaagtggattcttc-atattttgttgagaaatcacaagtt-gta-atgaatctttcttctttcaattcattcttgcaaggcttccat 19090405  T
Q  122 gacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||||  |||||||||||||||||||||||    
T  19090404 gacaatgagtagctaaatctcttttgttgggattagaggtacttga 19090359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 26602603 - 26602462
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  26602603 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 26602506  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  26602505 caatgagtagctaaatctcctttgttgggattagaggtacttga 26602462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 9642477 - 9642588
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||  ||||||||| |||| ||| |||||  ||||| | |||| |||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  9642477 tttgttgagtgatcacaagtgtgta-atggatctttctctttcaattcattcttgcaaagcttccatgacaatgagtagctaaatctcctttgttgggat 9642575  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  9642576 tagaggtacttga 9642588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 33850204 - 33850315
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| |||||||||||||| ||||||| |  ||||| | |||| |||||||| | | |||||||||||||||| ||||||||| ||||||||||    
T  33850204 tttgttgagagatcacaagtttgta-atgaatccttctctttcaattcattcttgcaaggcttccatgacaatgagtagataaatctcctttgttgggat 33850302  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  33850303 tagaggtacttga 33850315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 15915328 - 15915187
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| |||| ||||||||  |  || | |||| |||||||| | | ||||||    
T  15915328 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gtat-tgaatcttgcttcttcaattcattcttgcaaggcttccatga 15915231  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||| |||||| |||||||||||||||||||||||    
T  15915230 caatgagtagctagatctcctttgttgggattagaggtacttga 15915187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 15949849 - 15949708
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  15949849 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 15949752  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||| |||||| |||||||||||||||||||||||    
T  15949751 caatgagtagctagatctcctttgttgggattagaggtacttga 15949708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 23613080 - 23612939
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  23613080 gtgagagtgatagagagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatctttcttcttcaattcattcttgcaaggcttccatga 23612983  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  23612982 caatgagtagctaaatctcctttgttgggattagaggtacttga 23612939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 164
Target Start/End: Complemental strand, 45434276 - 45434138
Alignment:
Q  25 tgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgac 124  Q
    ||||||||||| || ||||||||||||  ||||||| ||| |||| ||||||||| ||||||| |  | ||| | |||| |||||||| | | ||||| |    
T  45434276 tgagagtgatagaaagtggattcttcctcatttgtttagagatcataagtttgta-atgaatccttctttttcaattcattcttgcaaggcttccatggc 45434178  T
Q  125 aatgagtagctaaatctccattgttgggattagaggtact 164  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  45434177 aatgagtagctaaatctcctttgttgggattagaggtact 45434138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 1379638 - 1379497
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  1379638 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 1379541  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  1379540 caatgagtagctaaatctcctttgttgggattagaggtacttga 1379497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 1948164 - 1948305
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||| ||||| ||| |||||||||  |  || | |||| |||||||| | | |||||     
T  1948164 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcataagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatgg 1948261  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  1948262 caatgagtagctaaatctcctttgttgggattagaggtacttga 1948305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 2447337 - 2447196
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  2447337 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 2447240  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  2447239 caatgagtagctaaatctcctttgttgggattagaggtacttga 2447196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 3923624 - 3923765
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  3923624 gtgagagtgatagagagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatctttcttcttcaattcattcttgcaaggcttccatga 3923721  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||||| || |||||||||||||||||||||||    
T  3923722 caatgagtagctaaatcacctttgttgggattagaggtacttga 3923765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 5049443 - 5049584
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  5049443 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 5049540  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  5049541 caatgagtagctaaatctcctttgttgggattagaggtacttga 5049584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 6796129 - 6795988
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  6796129 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 6796032  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  6796031 caatgagtagctaaatctcctttgttgggattagaggtacttga 6795988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 8141975 - 8142116
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  8141975 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 8142072  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  8142073 caatgagtagctaaatctcctttgttgggattagaggtacttga 8142116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 14288376 - 14288265
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| ||||||||| |||| ||| | |||  ||||| | ||||  ||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  14288376 tttgttgagagatcacaagtgtgta-atggacctttctctttcaattcatccttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 14288278  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  14288277 tagaggtacttga 14288265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 14299561 - 14299450
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| ||||||||| |||| ||| |||||  ||||| | ||||  ||||||| | | |||||||||||||||||||||||||| ||||| ||||    
T  14299561 tttgttgagagatcacaagtgtgta-atggatctttctctttcaattcatccttgcaaggcttccatgacaatgagtagctaaatctcctttgttaggat 14299463  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  14299462 tagaggtacttga 14299450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 21643179 - 21643068
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| || |||||| |||| ||| |||||  ||||| ||||||  ||||||| | | |||||||||||||||||||||||||| ||||||| ||    
T  21643179 tttgttgagagataacaagtgtgta-atggatctttctctttcacttcatccttgcaaggcttccatgacaatgagtagctaaatctcctttgttggcat 21643081  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  21643080 tagaggtacttga 21643068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 22853767 - 22853878
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| ||||||||| |||| ||| ||| |   |||| | |||| |||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  22853767 tttgttgagagatcacaagtgtgta-atggatccttccctttcaattcattcttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 22853865  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  22853866 tagaggtacttga 22853878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 36876236 - 36876095
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||| ||| | | ||||||    
T  36876236 gtgagagtgatagagagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatctttcttcttcaattcattctttcaaggcttccatga 36876139  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  36876138 caatgagtagctaaatctcttttgttgggattagaggtacttga 36876095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 39433600 - 39433457
Alignment:
Q  24 gtgagagtgataaaaggtggattcttc--catatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccat 121  Q
    |||||||||||| || ||||||||| |  ||| |||||||||| ||||||||| || | ||| ||| |  ||||| | |||| |||||||| | | ||||    
T  39433600 gtgagagtgatagaaagtggattctacatcat-tttgttgagagatcacaagtgtgca-atggatccttctctttcaattcattcttgcaaggcttccat 39433503  T
Q  122 gacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||    
T  39433502 gacaatgagtagctaaatctcttttgttaggattagaggtacttga 39433457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 8881003 - 8881085
Alignment:
Q  85 atcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||  | || | ||| || |||| |||||||||||  | |||||||||| |||||||||||||||||||||||    
T  8881003 atcttcatcttttcttccacttttgtaatgttatcatgacaatgatcaactaaatctcctttgttgggattagaggtacttga 8881085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 22853915 - 22853977
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  22853915 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 22853977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 33850348 - 33850414
Alignment:
Q  187 aatctatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    ||| |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  33850348 aatatatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 33850414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 39433415 - 39433358
Alignment:
Q  196 ttctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  39433415 ttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 39433358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 7412651 - 7412687
Alignment:
Q  215 attgagattattcctgcaatttatgcttatgtttgat 251  Q
    ||||||||||||| |||||||||||||||||||||||    
T  7412651 attgagattattcttgcaatttatgcttatgtttgat 7412687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 9642625 - 9642687
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||| ||||||    
T  9642625 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgcttgatt 9642687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 45434099 - 45434037
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattta-tgcttatgtttgatt 252  Q
    |||| |||||||| |||||||||||||||  |||||| |||| |||| |||||||||||||||    
T  45434099 tatggttctagcaattgatttgatattgatgttattcttgcactttattgcttatgtttgatt 45434037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 10830750 - 10830798
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| | |||||||||||||||||||||    
T  10830750 catgacaatgatgaactaaatctccttagttgggattagaggtacttga 10830798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 11024542 - 11024590
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| | |||||||||||||||||||||    
T  11024542 catgacaatgatgaactaaatctccttagttgggattagaggtacttga 11024590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 21900814 - 21900862
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| | |||||||||||||||||||||    
T  21900814 catgacaatgatgaactaaatctccttagttgggattagaggtacttga 21900862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 29336585 - 29336832
Alignment:
Q  15 aaacaaagggtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaag 114  Q
    ||||| || ||||||||||||  ||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||    
T  29336585 aaacacagagtgagagtgataggaggtggattcttcaagatttgttgagaaatcactagtttgtaaatgaatcttcatcttttccatcaatcttgcaaag 29336684  T
Q  115 ttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttgaccaggctaaacatgta------------tgtaatctatgattctagc 202  Q
    ||  |||||||||||||| |||| ||||| ||||||||||||||||||||||| || ||| |  |||||            |  ||| |||| |||||||    
T  29336685 tt--catgacaatgagtaactaattctcctttgttgggattagaggtacttgatcaagcttagtatgtaatcttttgatcttcaaatatatggttctagc 29336782  T
Q  203 atttgatttgatattgagattattcctgcaatttatgcttatgtttgatt 252  Q
    |||| | |||||||||||||||||| ||||||| ||| ||||||||||||    
T  29336783 attttacttgatattgagattattcttgcaattcatgtttatgtttgatt 29336832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 15013081 - 15012938
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatattt-gttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatg 122  Q
    |||||||||||| || ||||||||||||  |||| ||||||| |||||||||||||| ||||||| |  ||||| | |||| |||||||| | | |||||    
T  15013081 gtgagagtgatagaaagtggattcttcctcattttgttgagagatcacaagtttgta-atgaatccttctctttcaattcattcttgcaaggcttccatg 15012983  T
Q  123 acaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  15012982 acaatgagtagctaaatctcctttgttgggattagaggtacttga 15012938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 36425276 - 36425402
Alignment:
Q  40 gtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaat 139  Q
    |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||||||||||||||||||    
T  36425276 gtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatgacaatgagtagctaaat 36425374  T
Q  140 ctccattgttgggattagaggtacttga 167  Q
    |||| |||||||||||||||||||||||    
T  36425375 ctcctttgttgggattagaggtacttga 36425402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 45067946 - 45068088
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || ||||||||||||  ||||||||||| |||||||||||||| ||||||| |  ||||| | |||| | |||||| | | | ||||    
T  45067946 gtgagagtgatagaaagtggattcttcctcatttgttgagagatcacaagtttgta-atgaatcattctctttcaattcatttttgcaaggcttcaatga 45068044  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||| |||||||||||||||| |||||||||||||||||||||||    
T  45068045 caaggagtagctaaatctcctttgttgggattagaggtacttga 45068088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 11357739 - 11357865
Alignment:
Q  40 gtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaat 139  Q
    |||||||||||  | ||||||||||||||||||||| ||| |||||| ||  || || | |||| |||||||| | | |||| |||||||||||||||||    
T  11357739 gtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatttttctccttcaattcattcttgcaaggcttccatcacaatgagtagctaaat 11357837  T
Q  140 ctccattgttgggattagaggtacttga 167  Q
    |||| |||||||||||||||||||||||    
T  11357838 ctcctttgttgggattagaggtacttga 11357865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 1238906 - 1238765
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | | ||||    
T  1238906 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatctttcttcttcaattcattcttgcaaggcttctatga 1238809  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
T  1238808 caatgagtagttaaatctcctttgttgggattagaggtacttga 1238765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 6464107 - 6464248
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  6464107 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 6464204  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  6464205 caatgagtagctaaatctcctttgttgggattagaggtacttga 6464248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 7312040 - 7311899
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  7312040 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 7311943  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  7311942 caatgagtagctaaatctcctttgttgggattagaggtacttga 7311899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 8012851 - 8012992
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  8012851 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 8012948  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  8012949 caatgagtagctaaatctcctttgttgggattagaggtacttga 8012992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 36005013 - 36005154
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  36005013 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 36005110  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  36005111 caatgagtagctaaatctcctttgttgggattagaggtacttga 36005154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 36021329 - 36021470
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  36021329 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 36021426  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  36021427 caatgagtagctaaatctcctttgttgggattagaggtacttga 36021470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 36076658 - 36076517
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  36076658 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 36076561  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  36076560 caatgagtagctaaatctcctttgttgggattagaggtacttga 36076517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 16710198 - 16710339
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| ||||||||   | ||||||    
T  16710198 gtgagagtgatagatagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaagacttccatga 16710295  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  16710296 caatgagtagctaaatctcccttgttgggattagagatacttga 16710339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 26250197 - 26250264
Alignment:
Q  100 ttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||| |||||||| | | |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26250197 ttcattcttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggattagaggtacttga 26250264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 45068125 - 45068187
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  45068125 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 45068187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 15012901 - 15012839
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| |||||||||||||||| |||||||  |||||| |||| ||| ||||||||||||||||    
T  15012901 tatggttctagcatttgatttaatattgatgttattcttgcactttaatgcttatgtttgatt 15012839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 252
Target Start/End: Original strand, 12505295 - 12505536
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |||||||||||||||  ||||||||||| |||||||  ||||| ||||||| |  ||||| | |||| |||||||||| | ||||||    
T  12505295 gtgagagtgatagaaggtggattcttcctcatttgttgagagatcacaaagttgta-atgaatcgttctctttcaattcattcttgcaaagcttccatga 12505393  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga-ccaggctaaacatgta------tg------taatctatgattctagcatttgatt 210  Q
    |||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||      ||      |||| |||| |||||||||||  ||    
T  12505394 caatgagtagctaaatctccattgttgggattagaggtacttgatcttagctaaacatgtaatcttttgatctattaatatatggttctagcatttcctt 12505493  T
Q  211 tgatattgagattattcctgcaattta-tgcttatgtttgatt 252  Q
    ||||||||||||||||| |||| |||| |||||||||||||||    
T  12505494 tgatattgagattattcttgcactttattgcttatgtttgatt 12505536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 2439493 - 2439351
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||||||||| ||||||| |  ||||| | |||| |||||||||| | ||||||    
T  2439493 gtgagagtgatagaaggtggattcttcctcaattgttgagaaatcacaagtttgta-atgaatcattctctttcaattcattcttgcaaagcttccatga 2439395  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    || ||||||||||||||||| ||||| |||||||||||||||||    
T  2439394 cattgagtagctaaatctcctttgttcggattagaggtacttga 2439351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 2958554 - 2958409
Alignment:
Q  21 agggtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttacca 120  Q
    ||||||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | |||    
T  2958554 agggtgagagtgatagagagtggattcttcgttctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttcca 2958456  T
Q  121 tgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  2958455 tgacaatgagtagctaaatctcctttgttgggattagaggtacttga 2958409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 2967023 - 2966878
Alignment:
Q  21 agggtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttacca 120  Q
    ||||||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | |||    
T  2967023 agggtgagagtgatagagagtggattcttcgttctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttcca 2966925  T
Q  121 tgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  2966924 tgacaatgagtagctaaatctcctttgttgggattagaggtacttga 2966878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 25894179 - 25894321
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  25894179 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 25894277  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  25894278 caatgagtagctaaatctcctttgttgggattagaggtacttga 25894321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 4974256 - 4974113
Alignment:
Q  24 gtgagagtgataaaaggtggattcttc--catatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccat 121  Q
    |||||||||||| || ||||||||| |  ||| |||||||||| ||||||||| |||| ||| |||||| ||||| | |||| |||||||| | | ||||    
T  4974256 gtgagagtgatagaaagtggattctacatcat-tttgttgagagatcacaagtgtgta-atggatcttcctctttcaattcattcttgcaaggcttccat 4974159  T
Q  122 gacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  4974158 gacaatgagtagctaaatctcctttgttgggattagaggtacttga 4974113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 22360655 - 22360512
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  22360655 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 22360558  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttgacc 169  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  22360557 caatgagtagctaaatctcctttgttgggattagaggtacttgacc 22360512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 22314521 - 22314378
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  22314521 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 22314424  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttgacc 169  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||    
T  22314423 caatgagtagctaaacctcctttgttgggattagaggtacttgacc 22314378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 29414199 - 29414340
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  29414199 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatctttcttcttcaattcattcttgcaaggcttccatga 29414296  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||| ||| |||||||||||||||||||||||    
T  29414297 caatgagtagctaaatttcctttgttgggattagaggtacttga 29414340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 5876909 - 5876768
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||| ||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| | |||||||| | ||||||    
T  5876909 gtgagaatgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatcttgcttcttcaattcatttttgcaaagcttccatga 5876812  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
     ||||||||||||||||||| |||||||||||||||||||||||    
T  5876811 taatgagtagctaaatctcctttgttgggattagaggtacttga 5876768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 29981150 - 29981009
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  29981150 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 29981053  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  29981052 caatgagtagctaaatctcctttgttgggattagaggtacttga 29981009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 40958148 - 40958289
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  40958148 gtgagagtgatagagagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatctttcttcttcaattcattcttgcaaggcttccatga 40958245  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    || ||||||||||||||||| |||||||||||||||||||||||    
T  40958246 cagtgagtagctaaatctcctttgttgggattagaggtacttga 40958289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 42151510 - 42151369
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  42151510 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 42151413  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |  ||||||||||||||||||||    
T  42151412 caatgagtagctaaatctccttcattgggattagaggtacttga 42151369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 34356850 - 34356960
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  34356850 tttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 34356947  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  34356948 tagaggtacttga 34356960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 34358641 - 34358751
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  34358641 tttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 34358738  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  34358739 tagaggtacttga 34358751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 29974649 - 29974514
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  29974649 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 29974552  T
Q  124 caatgagtagctaaatctccattgttgggattagaggt 161  Q
    |||||||||||||||||||| |||||||||||||||||    
T  29974551 caatgagtagctaaatctcctttgttgggattagaggt 29974514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 30021993 - 30022128
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  30021993 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 30022090  T
Q  124 caatgagtagctaaatctccattgttgggattagaggt 161  Q
    |||||||||||||||||||| |||||||||||||||||    
T  30022091 caatgagtagctaaatctcctttgttgggattagaggt 30022128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 37335776 - 37335697
Alignment:
Q  88 ttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||| | || | |||||||| ||| |||||||||||||||||||||||  |||||||||||||| ||||||||    
T  37335776 ttcatcttttattccatttttgcaaagctacaatgacaatgagtagctaaatctcatttgttgggattagatgtacttga 37335697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 167
Target Start/End: Complemental strand, 42747720 - 42747634
Alignment:
Q  81 atgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||| |||  | || | ||| |||| |||||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  42747720 atgaatcttcatcatttcttccatttttgtaaagctaccatgagaatgagtagctaaatctcctttgttgggattagacgtacttga 42747634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 4974076 - 4974014
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  4974076 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 4974014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 17346848 - 17346799
Alignment:
Q  107 ttgcaaagttaccatgacaatgagtagctaaatctccattgttgggatta 156  Q
    |||||| | |||||||||||||||||||||||||||  ||||||||||||    
T  17346848 ttgcaaggctaccatgacaatgagtagctaaatctcatttgttgggatta 17346799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 42747598 - 42747537
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaatttatgcttatgtttgatt 252  Q
    ||||||||||||  || |||||||||||||||||||| ||| ||| ||| ||||||||||||    
T  42747598 tatgattctagctctttatttgatattgagattattcttgcgattcatgtttatgtttgatt 42747537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 34738736 - 34738688
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| |||||||||||||||||||||||    
T  34738736 catgacaatgatcaactaaatctcctttgttgggattagaggtacttga 34738688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 40153954 - 40153906
Alignment:
Q  108 tgcaaagttaccatgacaatgagtagctaaatctccattgttgggatta 156  Q
    ||||| |||||||||||||||||||| ||||||||  ||||||||||||    
T  40153954 tgcaaggttaccatgacaatgagtagttaaatctcatttgttgggatta 40153906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 2155745 - 2155793
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| | |||||||||||||||||||||    
T  2155745 catgacaatgatgaactaaatctccttagttgggattagaggtacttga 2155793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 3412915 - 3412963
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| | |||||||||||||||||||||    
T  3412915 catgacaatgatgaactaaatctccttagttgggattagaggtacttga 3412963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 12918575 - 12918623
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| | |||||||||||||||||||||    
T  12918575 catgacaatgatgaactaaatctccttagttgggattagaggtacttga 12918623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 4019765 - 4019907
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  4019765 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 4019863  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  4019864 caatgagtagctaaatctcctttgttgggattagaggtacttga 4019907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 4026191 - 4026333
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  4026191 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 4026289  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  4026290 caatgagtagctaaatctcctttgttgggattagaggtacttga 4026333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 7062046 - 7062188
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  7062046 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 7062144  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  7062145 caatgagtagctaaatctcctttgttgggattagaggtacttga 7062188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 7069232 - 7069374
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  7069232 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 7069330  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  7069331 caatgagtagctaaatctcctttgttgggattagaggtacttga 7069374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 34655943 - 34655801
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  34655943 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 34655845  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  34655844 caatgagtagctaaatctcctttgttgggattagaggtacttga 34655801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 1167009 - 1167151
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||| ||| ||||||||||||||   ||||||||||| |||||||  ||||| ||||||| |  ||||| | |||| |||||||||| | ||||||    
T  1167009 gtgagagtaatagaaggtggattcttcgtcatttgttgagagatcacaaagttgta-atgaatccttctctttcaattcattcttgcaaagcttccatga 1167107  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||||||| |||||||||||||| ||||    
T  1167108 caatgagtagctaaatctccattgctgggattagaggtatttga 1167151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 31548571 - 31548445
Alignment:
Q  40 gtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaat 139  Q
    |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||||||||||||||||||    
T  31548571 gtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatgacaatgagtagctaaat 31548473  T
Q  140 ctccattgttgggattagaggtacttga 167  Q
    |||| |||||||||||||||||||||||    
T  31548472 ctcctttgttgggattagaggtacttga 31548445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 34649492 - 34649350
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | ||||||    
T  34649492 gtgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatga 34649394  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| ||||| |||||||||||||||||    
T  34649393 caatgagtagctaaatctcctttgttaggattagaggtacttga 34649350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 21262104 - 21262245
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| ||| ||||||    
T  21262104 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagtt-gta-atgaatctttcttcttcaattcattcttgcaaggtttccatga 21262201  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
     ||||||||||||||||||| |||||||||||||||||||||||    
T  21262202 aaatgagtagctaaatctcctttgttgggattagaggtacttga 21262245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 4187378 - 4187236
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    ||||||||||||| |||||| |||| ||| |||||  ||||| | ||||  ||||||| | | ||||||    
T  4187378 gtgagagtgatagaaagtggattcttcatcttttgttgagaaattacaagtgtgta-atggatctttctctttcaattcatccttgcaaggcttccatga 4187280  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  4187279 caatgagtagctaaatctcctttgttggaattagaggtacttga 4187236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 31128851 - 31128962
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| ||||||||| |||| ||| |||||  ||||| | ||||  ||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  31128851 tttgttgagagatcacaagtgtgta-atggatctttctctttcaattcatccttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 31128949  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  31128950 tagaggtacttga 31128962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 1427954 - 1428095
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  1427954 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 1428051  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  1428052 caatgagtagctaaatctcctttgttgggattagaggtacttga 1428095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 4718071 - 4718212
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  4718071 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 4718168  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  4718169 caatgagtagctaaatctcctttgttgggattagaggtacttga 4718212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 9864290 - 9864432
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    ||||||||||||||| ||||| ||| |||||| ||  || || | |||| |||||||| | | ||||||    
T  9864290 gtgagagtgatagagagtggattcttcatcctttgttgagaaatcaaaagtt-gtaaatgaatatttctccttcaattcattcttgcaaggcttccatga 9864388  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
T  9864389 caatgagtagataaatctcctttgttgggattagaggtacttga 9864432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 13671343 - 13671483
Alignment:
Q  24 gtgagagtgataaaaggtggattcttc--catatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccat 121  Q
    |||||||||||| || ||||||||| |  ||| |||||||||| ||||||||| |||| ||| |||||  ||| | | |||| |||||||| | | ||||    
T  13671343 gtgagagtgatagaaagtggattctacatcat-tttgttgagagatcacaagtgtgta-atggatctttctctctcaattcattcttgcaaggcttccat 13671440  T
Q  122 gacaatgagtagctaaatctccattgttgggattagaggtact 164  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  13671441 gacaatgagtagctaaatctcctttgttgggattagaggtact 13671483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 32328023 - 32328164
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  32328023 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 32328120  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  32328121 caatgagtagctaaatctcctatgttgggattagaggtacttga 32328164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 4737910 - 4738027
Alignment:
Q  25 tgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgac 124  Q
    ||||||||||| |  |||||||||||  | ||||||||||||||||||||| ||| |||||||||  || || | |||| |||||||| | | |||||||    
T  4737910 tgagagtgatagagagtggattcttcattctttgttgagaaatcacaagtt-gtaaatgaatctttctccttcaattcattcttgcaaggcttccatgac 4738008  T
Q  125 aatgagtagctaaatctcc 143  Q
    |||||||||||||||||||    
T  4738009 aatgagtagctaaatctcc 4738027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 34711117 - 34711228
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||||||| ||||||||| |||  ||| |||||  ||||| | ||||  ||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  34711117 tttgttgagagatcacaagtgtgtc-atggatctttctctttcaattcatccttgcaaggcttccatgacaatgagtagctaaatctcctttgttgggat 34711215  T
Q  155 tagaggtacttga 167  Q
    |||||||| ||||    
T  34711216 tagaggtatttga 34711228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 29907471 - 29907409
Alignment:
Q  105 tcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||| | | |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  29907471 tcttgcaaggcttccatgacaatgagtagttaaatctcctttgttgggattagaggtacttga 29907409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 22870845 - 22870789
Alignment:
Q  111 aaagttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||| |||||||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  22870845 aaagctaccatgagaatgattagctaaatctcctttgttgggattagaggtacttga 22870789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 30121098 - 30121209
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    ||||||||||||||||||||||||| ||||||  |  ||||| | |||  |||||||| | | |||||| ||||||||| | ||||||| |||||  |||    
T  30121098 tttgttgagaaatcacaagtttgta-atgaattgttctctttcaattctttcttgcaaggcttccatgataatgagtagttgaatctcctttgttaagat 30121196  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  30121197 tagaggtacttga 30121209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 9864469 - 9864531
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  9864469 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 9864531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 13671526 - 13671588
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  13671526 tatggttctagcatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 13671588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 167
Target Start/End: Complemental strand, 27670686 - 27670644
Alignment:
Q  125 aatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  27670686 aatgagtagctaaatctcctttgttcggattagaggtacttga 27670644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 29907372 - 29907310
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    ||||||||||||||||||||||| |||||  |||||| |||| ||| ||||||||||||||||    
T  29907372 tatgattctagcatttgatttgaaattgatgttattcttgcactttaatgcttatgtttgatt 29907310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 20382813 - 20382868
Alignment:
Q  102 caatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggattag 157  Q
    |||| |||||| | |||||||| ||||||||||||||||||  |||||||||||||    
T  20382813 caattttgcaaggctaccatgataatgagtagctaaatctcatttgttgggattag 20382868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 1167184 - 1167250
Alignment:
Q  187 aatctatgattctagcatttgatttgatattgagattattcctgcaattta-tgcttatgtttgatt 252  Q
    ||| |||| |||||||||||| ||||||||||||| ||||| |||| |||| || ||||||||||||    
T  1167184 aatgtatggttctagcatttggtttgatattgagactattcttgcactttattgtttatgtttgatt 1167250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 22870758 - 22870692
Alignment:
Q  186 taatctatgattctagcatttgatttgatattgagattattcctgcaatttatgcttatgtttgatt 252  Q
    |||| ||||||||||||  || || |||| |||||||||||| ||||||| ||| ||||||||||||    
T  22870758 taatatatgattctagctctttatgtgattttgagattattcttgcaattcatgtttatgtttgatt 22870692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 14759214 - 14759279
Alignment:
Q  102 caatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||| |||||| | |||||||| ||||||||| ||||||||  |||||||||||| ||||| ||||    
T  14759214 caattttgcaaggctaccatgataatgagtagttaaatctcatttgttgggattaaaggtatttga 14759279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 9847119 - 9847071
Alignment:
Q  119 catgacaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||  | |||||||||| | |||||||||||||||||||||    
T  9847119 catgacaatgatgaactaaatctccttagttgggattagaggtacttga 9847071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0936 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0936
Description:

Target: scaffold0936; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 2791 - 2932
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatattt-gttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatg 122  Q
    |||||||||||| || |||||||| |||  |||| |||||||||||||||||||||| ||||||| |  ||||| | |||| |||||||| | | |||||    
T  2791 gtgagagtgatagaaagtggattcctcctcattttgttgagaaatcacaagtttgta-atgaatccttctctttcaattcattcttgcaaggcttccatg 2889  T
Q  123 acaatgagtagctaaatctccattgttgggattagaggtactt 165  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  2890 acaatgagtagctaaatctcctttgttgtgattagaggtactt 2932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0936; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 2973 - 3035
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| ||||||||||||||||||||||||  | |||| |||| ||| ||||||||||||||||    
T  2973 tatggttctagcatttgatttgatattgatgtcattcttgcactttaatgcttatgtttgatt 3035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 8411 - 8552
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttg-ttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatg 122  Q
    |||||||||||| || ||||||||||| || |||| ||||||||||||||||| ||| |||||||||  |  || | |||| |||||||| | | |||||    
T  8411 gtgagagtgatagaaagtggattcttc-atctttggttgagaaatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatg 8507  T
Q  123 acaatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  8508 acaatgagtagctaaatctcctttgttgggattagaggtacttga 8552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 15863 - 15721
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| ||  |||||||||||  ||||||||||| || ||||||||||| ||||||| |  ||||| | |||| ||||| || | | ||||||    
T  15863 gtgagagtgatagaaactggattcttcctcatttgttgagagattacaagtttgta-atgaatcattctctttcaattcattcttgaaaggcttccatga 15765  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||| ||||||||| |||||||||||| ||||||||||    
T  15764 caatgagtagataaatctcctttgttgggattaaaggtacttga 15721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 11663 - 11804
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| || |||||||||||    |||||||||||||||||||||   | |||||||||  |  || | |||| |||||||| | | |||||     
T  11663 gtgagagtgatagaaagtggattcttcatcttttgttgagaaatcacaagttg--aaatgaatcttgcttcttcaattcattcttgcaaggcttccatgt 11760  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  11761 caatgagtagctaaatctcctttgttgggattagaggtacttga 11804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 50381 - 50240
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  50381 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 50284  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  50283 caatgagtagctaaatctcctttgttgggattagaggtacttga 50240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 4536 - 4677
Alignment:
Q  24 gtgagagtgataaaaggtggattcttccatatttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatga 123  Q
    |||||||||||| |  |||||||||||    |||||||||| |||||||||| ||| |||||||||  |  || | |||| |||||||| | | ||||||    
T  4536 gtgagagtgatagagagtggattcttcatcctttgttgagacatcacaagtt-gta-atgaatcttgcttcttcaattcattcttgcaaggcttccatga 4633  T
Q  124 caatgagtagctaaatctccattgttgggattagaggtacttga 167  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  4634 caatgagtagctaaatctcctttgttgggattagaggtacttga 4677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 3306 - 3195
Alignment:
Q  55 tttgttgagaaatcacaagtttgtatatgaatcttcatcttttacttcaatcttgcaaagttaccatgacaatgagtagctaaatctccattgttgggat 154  Q
    |||||| ||| ||||||||| |||| ||| ||| |  ||||| | |||| |||||||| | | |||||||||||||||| ||||||||| ||||||||||    
T  3306 tttgttaagagatcacaagtgtgta-atggatccttctctttcaattcattcttgcaaggcttccatgacaatgagtagttaaatctcctttgttgggat 3208  T
Q  155 tagaggtacttga 167  Q
    |||||||||||||    
T  3207 tagaggtacttga 3195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 3158 - 3096
Alignment:
Q  191 tatgattctagcatttgatttgatattgagattattcctgcaattt-atgcttatgtttgatt 252  Q
    |||| |||||| |||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  3158 tatggttctagtatttgatttgatattgatgttattcttgcactttaatgcttatgtttgatt 3096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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